mRNA_M-pyrifera_M_contig81198.18994.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig81198.18994.1
Unique NamemRNA_M-pyrifera_M_contig81198.18994.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig81198.18994.1 vs. uniprot
Match: A0A5A8D3I2_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D3I2_CAFRO)

HSP 1 Score: 361 bits (926), Expect = 2.380e-111
Identity = 171/263 (65.02%), Postives = 208/263 (79.09%), Query Frame = 1
Query:    1 LMRSYNVIVDQDRLERIDTPSQAPMWRRLLFALCFLHSIVQERRKFGPLGWNIPYEFNSGDLSATIQFLEGHLYAGALSWPTLRYICGRVAYGGKVTDDMDTRLFIAYTAAWVSPRVLEDGFSFAPEKCIQPIPGDFSYALLDATDVAEYREYASSFPDIDSPEVFGLHPNADLTFRTKEVGELLATLGETQPR----ASGGGGKGKSMDDVVTEKAEQLLSDMPSDYVEDIYLDQLRA-LGGLSKPMNIFLMQEIQRFQAVI 774
            L RS+ V+V QDRLERIDTPSQAP+WRRL+F+LCFLHSIVQERRKFGPLGW IPYE+N+GDL A I FLE HLYAG +SWPTL+Y+     YGGK+TDD D RLF AYT  WVS   +EDGF+F P   I  IP DF Y++LD+T++  YR+Y ++ PD+DSPE+FGLHPNADLTFR KE  ELLATLGETQPR    ++ GG K KS+D++V E A   +  +P+DY+ED+Y++Q+R  LGG+ KPMNIFL QEIQRFQAVI
Sbjct: 1159 LNRSFTVLVSQDRLERIDTPSQAPLWRRLIFSLCFLHSIVQERRKFGPLGWCIPYEYNNGDLQACITFLERHLYAGTISWPTLQYMVAEAQYGGKITDDEDRRLFGAYTKLWVSRAAVEDGFTFNPAAPINAIPRDFVYSVLDSTEIDAYRKYTANLPDVDSPELFGLHPNADLTFRAKEASELLATLGETQPRGAAVSTAGGAKAKSLDELVMELASDFVKQVPADYIEDVYVEQIRKRLGGMRKPMNIFLFQEIQRFQAVI 1421          
BLAST of mRNA_M-pyrifera_M_contig81198.18994.1 vs. uniprot
Match: A0A5A8EDR5_CAFRO (Uncharacterized protein n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8EDR5_CAFRO)

HSP 1 Score: 361 bits (926), Expect = 6.290e-111
Identity = 171/263 (65.02%), Postives = 208/263 (79.09%), Query Frame = 1
Query:    1 LMRSYNVIVDQDRLERIDTPSQAPMWRRLLFALCFLHSIVQERRKFGPLGWNIPYEFNSGDLSATIQFLEGHLYAGALSWPTLRYICGRVAYGGKVTDDMDTRLFIAYTAAWVSPRVLEDGFSFAPEKCIQPIPGDFSYALLDATDVAEYREYASSFPDIDSPEVFGLHPNADLTFRTKEVGELLATLGETQPR----ASGGGGKGKSMDDVVTEKAEQLLSDMPSDYVEDIYLDQLRA-LGGLSKPMNIFLMQEIQRFQAVI 774
            L RS+ V+V QDRLERIDTPSQAP+WRRL+F+LCFLHSIVQERRKFGPLGW IPYE+N+GDL A I FLE HLYAG +SWPTL+Y+     YGGK+TDD D RLF AYT  WVS   +EDGF+F P   I  IP DF Y++LD+T++  YR+Y ++ PD+DSPE+FGLHPNADLTFR KE  ELLATLGETQPR    ++ GG K KS+D++V E A   +  +P+DY+ED+Y++Q+R  LGG+ KPMNIFL QEIQRFQAVI
Sbjct: 4154 LNRSFTVLVSQDRLERIDTPSQAPLWRRLIFSLCFLHSIVQERRKFGPLGWCIPYEYNNGDLQACITFLERHLYAGTISWPTLQYMVAEAQYGGKITDDEDRRLFGAYTKLWVSRAAVEDGFTFNPAAPINAIPRDFVYSVLDSTEIDAYRKYTANLPDVDSPELFGLHPNADLTFRAKEASELLATLGETQPRGAAVSTAGGAKAKSLDELVMELASDFVKQVPADYIEDVYVEQIRKRLGGMRKPMNIFLFQEIQRFQAVI 4416          
BLAST of mRNA_M-pyrifera_M_contig81198.18994.1 vs. uniprot
Match: A0A812VYX1_SYMMI (DNAH5 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VYX1_SYMMI)

HSP 1 Score: 318 bits (814), Expect = 1.800e-105
Identity = 148/258 (57.36%), Postives = 189/258 (73.26%), Query Frame = 1
Query:    1 LMRSYNVIVDQDRLERIDTPSQAPMWRRLLFALCFLHSIVQERRKFGPLGWNIPYEFNSGDLSATIQFLEGHLYAGALSWPTLRYICGRVAYGGKVTDDMDTRLFIAYTAAWVSPRVLEDGFSFAPEKCIQPIPGDFSYALLDATDVAEYREYASSFPDIDSPEVFGLHPNADLTFRTKEVGELLATLGETQPRASGGGGKGKSMDDVVTEKAEQLLSDMPSDYVEDIYLDQLRALGGLSKPMNIFLMQEIQRFQAVI 774
            L RSY VIVDQDR++RI+TP+    WR LLFALCF HS+VQERRKFGPLGW +PYEFN GDL+ATI FLE HL   ALSW TL+Y+ G V YGG++TDD+D RLF+AYT AW+SP  L   FSF PE  +  +PG+F Y + D  ++ +Y  Y   FP+ D PEV GLHPNADLTFR KEV +LL T+ ETQP+ SG  G GK+ +++V  K ++L+S +P+DY+ED Y + + ++GG   P+NIFL QE+QR Q  I
Sbjct:   42 LQRSYTVIVDQDRIDRIETPT----WRTLLFALCFTHSVVQERRKFGPLGWCVPYEFNDGDLNATIAFLEKHLEQSALSWSTLQYMVGEVQYGGRITDDLDRRLFVAYTEAWLSPVTLTPNFSFNPENPLSKMPGNFMYKISDYLEIDDYHSYIQKFPEADPPEVLGLHPNADLTFRFKEVNQLLDTILETQPKQSGAVGGGKTREEIVLAKCDELMSIIPADYIEDSYEESIASMGGYDIPLNIFLFQEVQRLQMAI 295          
BLAST of mRNA_M-pyrifera_M_contig81198.18994.1 vs. uniprot
Match: A0A7S2G7T5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7T5_9STRA)

HSP 1 Score: 329 bits (844), Expect = 2.060e-103
Identity = 162/258 (62.79%), Postives = 195/258 (75.58%), Query Frame = 1
Query:    1 LMRSYNVIVDQDRLERIDTPSQAPMWRRLLFALCFLHSIVQERRKFGPLGWNIPYEFNSGDLSATIQFLEGHLYAGALSWPTLRYICGRVAYGGKVTDDMDTRLFIAYTAAWVSPRVLEDGFSFAPEKCIQPIPGDFSYALLDATDVAEYREYASSFPDIDSPEVFGLHPNADLTFRTKEVGELLATLGETQPRASGGGGKGKSMDDVVTEKAEQLLSDMPSDYVEDIYLDQLRALGGLSKPMNIFLMQEIQRFQAVI 774
            L+RS+ VIVDQDRLER++T      WR LL+A+CF HS+VQERRKFG LGW +PYEFN GDL+A I FLE HLY GALSWPTL+Y+   V YGGK+TD+ D RLF +YT AW+SP  L   FSF PE  I  IP DF Y++ D  +V EY  +  SFPDIDSPEVFGLHPNADLTFR KEV  LL T+ ETQP++S   G G++ +D+V EKAE+LL+ MPSDY+ED Y++ +  LGGLS P+NIFLMQEIQR Q VI
Sbjct:  422 LLRSFTVIVDQDRLERVETSQ----WRSLLYAICFQHSVVQERRKFGSLGWCVPYEFNDGDLNACITFLEKHLYQGALSWPTLQYMVAAVQYGGKITDNNDQRLFKSYTEAWISPYTLAPNFSFNPESPINRIPNDFMYSVPDCQEVDEYVAFVQSFPDIDSPEVFGLHPNADLTFRNKEVQTLLNTILETQPKSSSASG-GRTREDIVYEKAEELLATMPSDYIEDEYMEAIGDLGGLSIPLNIFLMQEIQRLQMVI 674          
BLAST of mRNA_M-pyrifera_M_contig81198.18994.1 vs. uniprot
Match: A0A7S3V5M0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5M0_9STRA)

HSP 1 Score: 310 bits (794), Expect = 9.380e-96
Identity = 151/260 (58.08%), Postives = 189/260 (72.69%), Query Frame = 1
Query:    1 LMRSYN--VIVDQDRLERIDTPSQAPMWRRLLFALCFLHSIVQERRKFGPLGWNIPYEFNSGDLSATIQFLEGHLYAGALSWPTLRYICGRVAYGGKVTDDMDTRLFIAYTAAWVSPRVLEDGFSFAPEKCIQPIPGDFSYALLDATDVAEYREYASSFPDIDSPEVFGLHPNADLTFRTKEVGELLATLGETQPRASGGGGKGKSMDDVVTEKAEQLLSDMPSDYVEDIYLDQLRALGGLSKPMNIFLMQEIQRFQAVI 774
            L+RSY   V+VDQD++ER+DT      WR+LLFALCFLHSIVQERRKFGPLGW IPYE+N+GDL + + FLE HLY G +SW T +Y+   V YGGK+TD +D RLF  YT  W++ R  E+ +S+ P++ I  IP DF Y +   T+ A+YR+Y   FP+IDSPE+FGLHPNADLTFR KE   L  TLGETQP+ SGG  +G S +DVV EK  +LL  +P DYVED Y  +++ LGG++ PMNIFL QEIQR Q VI
Sbjct:  463 LLRSYTPGVMVDQDKIERVDTAQ----WRQLLFALCFLHSIVQERRKFGPLGWCIPYEYNNGDLQSCVLFLEKHLYNGPISWSTFQYMVSAVQYGGKITDSLDVRLFRTYTEEWLTERTCEENYSYNPDEPIFKIPNDFRYNVPSCTEHADYRKYIEQFPEIDSPEIFGLHPNADLTFRVKEATSLFQTLGETQPKGSGGD-EGVSREDVVYEKTTELLGRLPDDYVEDEYKVKIKKLGGMTVPMNIFLYQEIQRLQQVI 717          
BLAST of mRNA_M-pyrifera_M_contig81198.18994.1 vs. uniprot
Match: A0A2D5NKH1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5NKH1_9BACT)

HSP 1 Score: 307 bits (787), Expect = 4.410e-95
Identity = 147/259 (56.76%), Postives = 188/259 (72.59%), Query Frame = 1
Query:    1 LMRSYNVIVDQDRLERIDTPSQAPMWRRLLFALCFLHSIVQERRKFGPLGWNIPYEFNSGDLSATIQFLEGHLYAGALSWPTLRYICGRVAYGGKVTDDMDTRLFIAYTAAWVSPRVLEDGFSFAPEKCIQPIPGDFSYAL-LDATDVAEYREYASSFPDIDSPEVFGLHPNADLTFRTKEVGELLATLGETQPRASGGGGKGKSMDDVVTEKAEQLLSDMPSDYVEDIYLDQLRALGGLSKPMNIFLMQEIQRFQAVI 774
            ++RSY V+VDQDRLER+++     MWR+LLFALCFLHS VQERRKFGPLG+ IPYEFN+GDL+A I FLE HLY G +SWPT +Y+     YGGK+TD++D R+F  YT  W++     D F++ P K +  I GDF+Y +    TD+ EY  Y  +FP+IDSPE+FGLHPNADLTFR KEVG L  TLGETQP+    GG G S +++V++K ++LL  +P DY ED Y  ++  LGGL+ P+NIFL QEIQR Q VI
Sbjct:  416 ILRSYTVLVDQDRLERVESV----MWRQLLFALCFLHSTVQERRKFGPLGFCIPYEFNNGDLTACILFLEKHLYTGNISWPTFQYMVSEAQYGGKITDNLDRRMFQTYTQVWLTHNTCSDSFTYNPAKPLLKIQGDFNYKIGATGTDIGEYHAYLKTFPEIDSPEIFGLHPNADLTFRVKEVGALFDTLGETQPKGGSSGG-GASREEIVSDKCDELLERLPDDYKEDEYKAKINKLGGLAIPLNIFLYQEIQRLQKVI 669          
BLAST of mRNA_M-pyrifera_M_contig81198.18994.1 vs. uniprot
Match: A0A482S2S2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2S2_9ARCH)

HSP 1 Score: 308 bits (790), Expect = 1.910e-94
Identity = 145/258 (56.20%), Postives = 189/258 (73.26%), Query Frame = 1
Query:    1 LMRSYNVIVDQDRLERIDTPSQAPMWRRLLFALCFLHSIVQERRKFGPLGWNIPYEFNSGDLSATIQFLEGHLYAGALSWPTLRYICGRVAYGGKVTDDMDTRLFIAYTAAWVSPRVLEDGFSFAPEKCIQPIPGDFSYALLDATDVAEYREYASSFPDIDSPEVFGLHPNADLTFRTKEVGELLATLGETQPRASGGGGKGKSMDDVVTEKAEQLLSDMPSDYVEDIYLDQLRALGGLSKPMNIFLMQEIQRFQAVI 774
            ++RSY +IVDQDRLER+D    A  WR+LLFALCFLHS+VQERRKFG LGW IPYE+N+GDL+A I FLE HLY G++SWPT +Y+     YGGK+TD +D RLF  YT  W++    ++GF+F P+  I  I  +F Y + +  ++A+Y +Y  +FP+IDSPE+FGLHPNADLTFR KEV  LL TLGETQP+  G  G G S +D+V+EKA +++  MP  Y+E+ Y  ++  LGGL+ P+NIFL QEIQR Q VI
Sbjct:  571 ILRSYTIIVDQDRLERVD--QGAAQWRQLLFALCFLHSVVQERRKFGSLGWGIPYEYNNGDLTACILFLEKHLYNGSISWPTFQYMVCEAQYGGKITDTLDRRLFKTYTTVWLNSNTCQEGFAFNPKVPIFKIADNFVYRVDNYENIAQYHQYIKAFPEIDSPEIFGLHPNADLTFRVKEVTALLNTLGETQPKGGGSSGDGLSREDIVSEKAAEIIGRMPEHYIEEEYKLKINKLGGLTIPLNIFLYQEIQRLQNVI 826          
BLAST of mRNA_M-pyrifera_M_contig81198.18994.1 vs. uniprot
Match: A0A3L6V0U4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V0U4_9STRA)

HSP 1 Score: 298 bits (764), Expect = 1.000e-93
Identity = 141/259 (54.44%), Postives = 192/259 (74.13%), Query Frame = 1
Query:    1 LMRSYNVIVDQDRLERIDTPSQAPMWRRLLFALCFLHSIVQERRKFGPLGWNIPYEFNSGDLSATIQFLEGHLYAGALSWPTLRYICGRVAYGGKVTDDMDTRLFIAYTAAWVSPRVLEDGFSFAPEKCIQPIPGDFSYALLDATDVAEYREYASSFPDIDSPEVFGLHPNADLTFRTKEVGELLATLGETQPRASGGGGKGKSMDDVVTEKAEQLLSDMPSDYVEDIYLDQLRA-LGGLSKPMNIFLMQEIQRFQAVI 774
            ++RS+ V+VDQD+LERI+T      WR LLFAL FLHSIVQERRKFGPLG++IPYEFN+ DL+A++ FLE HLYAG+LSWPTL+Y+   V YGG++TD++D RLF AY   W+SP  L   F+F PE  +  +P DF Y + D TD+ E+ ++  SFP +DSPE+FGLHPNADLTFR KEVG LL TL ETQP++      G + + VV +K ++LL+ +P ++V++  L+ ++  LGGL  P+N+FL QE+Q+ QAV+
Sbjct:  347 MLRSFTVLVDQDKLERIETTQ----WRTLLFALSFLHSIVQERRKFGPLGFSIPYEFNASDLTASMVFLEKHLYAGSLSWPTLQYMIAEVHYGGRITDELDRRLFKAYCDEWLSPGTLAPSFTFNPEALVSRLPQDFVYGIPDGTDMDEFHKFLGSFPKVDSPEIFGLHPNADLTFRVKEVGALLTTLSETQPKSQSSARGGATREAVVLDKCDELLTKLPKEFVDESSLELIQTKLGGLHVPLNVFLWQELQQLQAVM 601          
BLAST of mRNA_M-pyrifera_M_contig81198.18994.1 vs. uniprot
Match: A0A2D4BGN3_PYTIN (Dynein heavy chain n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGN3_PYTIN)

HSP 1 Score: 308 bits (788), Expect = 3.280e-93
Identity = 149/258 (57.75%), Postives = 190/258 (73.64%), Query Frame = 1
Query:    1 LMRSYNVIVDQDRLERIDTPSQAPMWRRLLFALCFLHSIVQERRKFGPLGWNIPYEFNSGDLSATIQFLEGHLYAGALSWPTLRYICGRVAYGGKVTDDMDTRLFIAYTAAWVSPRVLEDGFSFAPEKCIQPIPGDFSYALLDATDVAEYREYASSFPDIDSPEVFGLHPNADLTFRTKEVGELLATLGETQPRASGGGGKGKSMDDVVTEKAEQLLSDMPSDYVEDIYLDQLRALGGLSKPMNIFLMQEIQRFQAVI 774
            L+RSY V+VDQD+LER++T      WR+LLF LCFLHSIV ER+KFGPLGW IPYE+N+GDL+A   FLE HLY G +SWPTL+Y+   V YGGK+TD+MD RLF  YT   ++P V    FS+ P + I  IP DF+Y +  A  + +YR +  +FP++DSPE+FGLHPNADLT+R KEV +LL TLG+TQP+  GGG  G S +DVV++KA +LL  +P DYVED Y  ++  LGGL+ P+NIFL QEIQR Q VI
Sbjct:  802 LLRSYTVMVDQDKLERVETSQ----WRQLLFDLCFLHSIVIERKKFGPLGWGIPYEYNNGDLAACTIFLEKHLYNGPISWPTLQYMVAEVQYGGKITDNMDRRLFNFYTEWCLTPEVCAPSFSYNPAEPIFRIPNDFNYRIPVADSIDDYRNFLHTFPEVDSPEIFGLHPNADLTYRVKEVNQLLTTLGDTQPKG-GGGSSGVSREDVVSDKARELLERLPEDYVEDDYKAKINKLGGLTIPLNIFLFQEIQRLQRVI 1054          
BLAST of mRNA_M-pyrifera_M_contig81198.18994.1 vs. uniprot
Match: A0A835YLK0_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK0_9STRA)

HSP 1 Score: 307 bits (786), Expect = 4.020e-92
Identity = 146/258 (56.59%), Postives = 186/258 (72.09%), Query Frame = 1
Query:    1 LMRSYNVIVDQDRLERIDTPSQAPMWRRLLFALCFLHSIVQERRKFGPLGWNIPYEFNSGDLSATIQFLEGHLYAGALSWPTLRYICGRVAYGGKVTDDMDTRLFIAYTAAWVSPRVLEDGFSFAPEKCIQPIPGDFSYALLDATDVAEYREYASSFPDIDSPEVFGLHPNADLTFRTKEVGELLATLGETQPRASGGGGKGKSMDDVVTEKAEQLLSDMPSDYVEDIYLDQLRALGGLSKPMNIFLMQEIQRFQAVI 774
            ++RSY VIVDQ+RLER++TP     WR+LLFALCF+HS+VQERRKFGPLGW IPYE+N+GDL+A I FLE HLY G +SW T +Y+   V YGGK+TDD+D R+F  YT  W++P    D FS+ P + I  IP DF Y + +A  +  ++EY  +FPDID+PE+FGLHPNADLTFR KEV  +  TL +TQP+         S +DVV EKA +LL  +P DY+ED Y  +L+ LGGL+ P+NIFL QEIQR Q VI
Sbjct: 4149 MLRSYTVIVDQERLERVETPQ----WRQLLFALCFMHSVVQERRKFGPLGWCIPYEYNNGDLTACILFLEKHLYNGPISWSTFQYMVAEVQYGGKITDDLDRRMFKTYTQVWLTPTTCNDNFSYNPAQPIFRIPKDFKYTIPNADQIGIFKEYVRTFPDIDTPEIFGLHPNADLTFRVKEVNSMFTTLDDTQPKGXXXXXX-VSREDVVYEKAGELLGRLPEDYIEDEYKAKLQKLGGLAVPLNIFLFQEIQRLQRVI 4401          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81198.18994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8D3I2_CAFRO2.380e-11165.02Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8EDR5_CAFRO6.290e-11165.02Uncharacterized protein n=4 Tax=Sar TaxID=2698737 ... [more]
A0A812VYX1_SYMMI1.800e-10557.36DNAH5 protein (Fragment) n=1 Tax=Symbiodinium micr... [more]
A0A7S2G7T5_9STRA2.060e-10362.79Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3V5M0_9STRA9.380e-9658.08Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A2D5NKH1_9BACT4.410e-9556.76Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A482S2S2_9ARCH1.910e-9456.20Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A3L6V0U4_9STRA1.000e-9354.44Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A2D4BGN3_PYTIN3.280e-9357.75Dynein heavy chain n=1 Tax=Pythium insidiosum TaxI... [more]
A0A835YLK0_9STRA4.020e-9256.59Dynein heavy chain n=1 Tax=Tribonema minus TaxID=3... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81198contigM-pyrifera_M_contig81198:160..933 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score311.2
Seed ortholog evalue4.4e-82
Seed eggNOG ortholog36331.EPrPI00000016101
KEGG koko:K10408
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001539,GO:0001578,GO:0003341,GO:0005575,GO:0005623,GO:0005929,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0031514,GO:0034622,GO:0035082,GO:0036158,GO:0040011,GO:0042995,GO:0043226,GO:0043933,GO:0044085,GO:0044464,GO:0044782,GO:0048870,GO:0051179,GO:0051674,GO:0060271,GO:0060285,GO:0060294,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0120025,GO:0120031,GO:0120036
EggNOG free text desc.Dynein heavy chain. Source PGD
EggNOG OGs1MAGJ@121069,COG5245@1,KOG3595@2759
COG Functional cat.Z
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Exons1
Model size774
Cds size771
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816717.9395068-UTR-M-pyrifera_M_contig81198:159..1621622816717.9395068-UTR-M-pyrifera_M_contig81198:159..162Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig81198 160..162 +
1692278137.9909663-UTR-M-pyrifera_M_contig81198:159..1621692278137.9909663-UTR-M-pyrifera_M_contig81198:159..162Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig81198 160..162 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816717.955747-CDS-M-pyrifera_M_contig81198:162..9331622816717.955747-CDS-M-pyrifera_M_contig81198:162..933Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81198 163..933 +
1692278138.003142-CDS-M-pyrifera_M_contig81198:162..9331692278138.003142-CDS-M-pyrifera_M_contig81198:162..933Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81198 163..933 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81198.18994.1prot_M-pyrifera_M_contig81198.18994.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig81198 163..933 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig81198.18994.1

>prot_M-pyrifera_M_contig81198.18994.1 ID=prot_M-pyrifera_M_contig81198.18994.1|Name=mRNA_M-pyrifera_M_contig81198.18994.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=257bp
MRSYNVIVDQDRLERIDTPSQAPMWRRLLFALCFLHSIVQERRKFGPLGW
NIPYEFNSGDLSATIQFLEGHLYAGALSWPTLRYICGRVAYGGKVTDDMD
TRLFIAYTAAWVSPRVLEDGFSFAPEKCIQPIPGDFSYALLDATDVAEYR
EYASSFPDIDSPEVFGLHPNADLTFRTKEVGELLATLGETQPRASGGGGK
GKSMDDVVTEKAEQLLSDMPSDYVEDIYLDQLRALGGLSKPMNIFLMQEI
QRFQAVI
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mRNA from alignment at M-pyrifera_M_contig81198:160..933+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig81198.18994.1 ID=mRNA_M-pyrifera_M_contig81198.18994.1|Name=mRNA_M-pyrifera_M_contig81198.18994.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig81198:160..933+ (Macrocystis pyrifera P11B4 male)
TTGATGCGCTCCTACAATGTGATCGTGGATCAAGATCGTCTGGAACGAAT TGACACTCCATCACAAGCACCAATGTGGCGAAGACTTCTCTTTGCTCTTT GTTTCTTGCACTCTATTGTGCAGGAAAGGAGAAAGTTTGGTCCATTGGGA TGGAACATTCCGTATGAATTCAACTCTGGGGACTTGTCTGCAACTATCCA ATTCTTGGAAGGACATTTGTATGCTGGAGCACTCTCATGGCCAACACTGC GCTACATCTGTGGCCGTGTGGCATATGGTGGGAAGGTGACAGATGACATG GACACCCGCTTGTTCATTGCATACACTGCAGCATGGGTGTCTCCACGTGT TCTTGAAGATGGGTTCTCATTTGCCCCAGAGAAGTGTATTCAACCTATCC CAGGTGATTTCTCCTACGCATTACTTGATGCAACTGATGTTGCCGAGTAT CGTGAGTATGCATCTTCCTTCCCAGACATTGACAGCCCTGAAGTCTTTGG TCTTCATCCCAACGCTGACCTTACATTCCGAACAAAGGAAGTTGGGGAAT TGCTGGCAACACTTGGTGAAACACAACCACGTGCTTCTGGAGGTGGAGGA AAAGGCAAGTCTATGGATGATGTTGTCACAGAAAAAGCAGAGCAACTCTT GTCAGATATGCCAAGTGACTATGTGGAAGACATCTACTTGGATCAACTTC GTGCACTTGGTGGATTGAGCAAACCCATGAACATCTTCTTGATGCAAGAA ATCCAACGATTCCAAGCTGTGATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig81198:160..933+

>mRNA_M-pyrifera_M_contig81198.18994.1 ID=mRNA_M-pyrifera_M_contig81198.18994.1|Name=mRNA_M-pyrifera_M_contig81198.18994.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1542bp|location=Sequence derived from alignment at M-pyrifera_M_contig81198:160..933+ (Macrocystis pyrifera P11B4 male)
ATGCGCTCCTACAATGTGATCGTGGATCAAGATCGTCTGGAACGAATTGA
CACTCCATCACAAGCACCAATGTGGCGAAGACTTCTCTTTGCTCTTTGTT
TCTTGCACTCTATTGTGCAGGAAAGGAGAAAGTTTGGTCCATTGGGATGG
AACATTCCGTATGAATTCAACTCTGGGGACTTGTCTGCAACTATCCAATT
CTTGGAAGGACATTTGTATGCTGGAGCACTCTCATGGCCAACACTGCGCT
ACATCTGTGGCCGTGTGGCATATGGTGGGAAGGTGACAGATGACATGGAC
ACCCGCTTGTTCATTGCATACACTGCAGCATGGGTGTCTCCACGTGTTCT
TGAAGATGGGTTCTCATTTGCCCCAGAGAAGTGTATTCAACCTATCCCAG
GTGATTTCTCCTACGCATTACTTGATGCAACTGATGTTGCCGAGTATCGT
GAGTATGCATCTTCCTTCCCAGACATTGACAGCCCTGAAGTCTTTGGTCT
TCATCCCAACGCTGACCTTACATTCCGAACAAAGGAAGTTGGGGAATTGC
TGGCAACACTTGGTGAAACACAACCACGTGCTTCTGGAGGTGGAGGAAAA
GGCAAGTCTATGGATGATGTTGTCACAGAAAAAGCAGAGCAACTCTTGTC
AGATATGCCAAGTGACTATGTGGAAGACATCTACTTGGATCAACTTCGTG
CACTTGGTGGATTGAGCAAACCCATGAACATCTTCTTGATGCAAGAAATC
CAACGATTCCAAGCTGTGATCATGCGCTCCTACAATGTGATCGTGGATCA
AGATCGTCTGGAACGAATTGACACTCCATCACAAGCACCAATGTGGCGAA
GACTTCTCTTTGCTCTTTGTTTCTTGCACTCTATTGTGCAGGAAAGGAGA
AAGTTTGGTCCATTGGGATGGAACATTCCGTATGAATTCAACTCTGGGGA
CTTGTCTGCAACTATCCAATTCTTGGAAGGACATTTGTATGCTGGAGCAC
TCTCATGGCCAACACTGCGCTACATCTGTGGCCGTGTGGCATATGGTGGG
AAGGTGACAGATGACATGGACACCCGCTTGTTCATTGCATACACTGCAGC
ATGGGTGTCTCCACGTGTTCTTGAAGATGGGTTCTCATTTGCCCCAGAGA
AGTGTATTCAACCTATCCCAGGTGATTTCTCCTACGCATTACTTGATGCA
ACTGATGTTGCCGAGTATCGTGAGTATGCATCTTCCTTCCCAGACATTGA
CAGCCCTGAAGTCTTTGGTCTTCATCCCAACGCTGACCTTACATTCCGAA
CAAAGGAAGTTGGGGAATTGCTGGCAACACTTGGTGAAACACAACCACGT
GCTTCTGGAGGTGGAGGAAAAGGCAAGTCTATGGATGATGTTGTCACAGA
AAAAGCAGAGCAACTCTTGTCAGATATGCCAAGTGACTATGTGGAAGACA
TCTACTTGGATCAACTTCGTGCACTTGGTGGATTGAGCAAACCCATGAAC
ATCTTCTTGATGCAAGAAATCCAACGATTCCAAGCTGTGATC
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