mRNA_M-pyrifera_M_contig81128.18975.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig81128.18975.1
Unique NamemRNA_M-pyrifera_M_contig81128.18975.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig81128.18975.1 vs. uniprot
Match: A0A2E6R9T1_9GAMM (Sulfatase domain-containing protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A2E6R9T1_9GAMM)

HSP 1 Score: 145 bits (365), Expect = 3.950e-36
Identity = 96/262 (36.64%), Postives = 137/262 (52.29%), Query Frame = 1
Query:    1 GQRFAQAHATASYTLASTASLFTGMSPRAHGAEREVGHVLGADRVTLAEVLGERGFATAA-FSLNPQVSRETGFAQGFDVF-------------EYAPRDDFTYNQLPQGFLERVTATWQAQAGERRF-LYVHLLPPHVPYTPPPPFNELFGARKRYDATLAYADAQLDALLDAL---GPLDDVALVVTSDHGEAFGEHGRILHGSMASKEMIHVPLVLHGPGL---QGDVRDDLVRTRDLAATVCEWLDVPWDARMAHGRS 723
            G RFA A + A  T  S +++ TG+ P  HG       VL     TLAE+LG+ G+ATAA     P +SR  GF QGFD+F             E AP+ +  +++     +      W     E  F L++H   PH P+ PPPP+++L+ A   YD  +AYAD++L  +LD L   G LD   +V+T+DHGE  GEH  + H  +A    +HVPL++  PGL   Q  V D  V T D+  T+ + L +   A + HG+S
Sbjct:   86 GIRFANAVSVAPITAPSHSTILTGLYPTGHGVRDNGLFVLSEQNRTLAEILGDHGYATAAAVGAFPVISR-FGFDQGFDLFDDHLTGMYEDYLGERAPKKEMFFDERRAAQVNEAVIPWLDNLDEEPFFLWLHYFDPHQPFEPPPPYDQLY-ADDLYDGEIAYADSRLGHMLDQLKRLGKLDRTLIVMTADHGEGLGEHNEVTHAVLAYDSTLHVPLIIRPPGLGQEQARVIDARVGTVDIVPTILDLLGIEIPAEI-HGQS 344          
BLAST of mRNA_M-pyrifera_M_contig81128.18975.1 vs. uniprot
Match: A0A2D6BPR0_9DELT (Sulfatase domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BPR0_9DELT)

HSP 1 Score: 139 bits (349), Expect = 5.810e-34
Identity = 96/239 (40.17%), Postives = 124/239 (51.88%), Query Frame = 1
Query:    1 GQRFAQAHATASYTLASTASLFTGMSPRAHGAEREVGHVLGADRVTLAEVLGERGFATAAFSLNPQVSRETGFAQGFDVFEYAPRDDFTYNQLP-QGFLERVTAT--------WQAQAGERRFLYVHLLPPHVPYTPPPPFNELFGARKRYDATLAYADAQLDALLDAL---GPLDDVALVVTSDHGEAFGEHGRILHGSMASKEMIHVPLVLHGPGL-QGDVRDDLVRTRDLAATVCE 678
            G RF +A+ATA  TL S AS+ TG+ P  HG        LG +  TLAE     GF T A   +  +S + G  QGFD ++    D F   +    GF ER TAT        W A   +  FL+VH   PH  Y PP P++E F  R  YD  +AY D+++  L++AL   G  D   + VTSDHGEA GEHG   HG      ++ VPL+L GPGL  G  R DLV    +A T+ +
Sbjct:   86 GLRFERAYATAPLTLPSHASMLTGLYPPRHGVRHNGVFHLGQEAETLAESFQAAGFHTGAVVGSFVLSAQFGLHQGFDHYD----DQFGEKRSAGSGFQER-TATQVTDHALAWLATVDDPFFLWVHYYDPHADYQPPAPWSERFAGRL-YDGEVAYVDSEIGRLIEALEERGRFDRTVVAVTSDHGEALGEHGESTHGYFLYDAVLRVPLILRGPGLPSGQARADLVSGAAVAPTLAQ 318          
BLAST of mRNA_M-pyrifera_M_contig81128.18975.1 vs. uniprot
Match: A0A7W1SCU3_9BACT (Sulfatase-like hydrolase/transferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W1SCU3_9BACT)

HSP 1 Score: 138 bits (347), Expect = 6.490e-34
Identity = 96/235 (40.85%), Postives = 123/235 (52.34%), Query Frame = 1
Query:    1 GQRFAQAHATASYTLASTASLFTGMSPRAHGAEREVGHVLGADRVTLAEVLGERGFATAAFSLNPQVSRETGFAQGFDVF-EYAPR--DDFTYNQLPQGFLERVTATW-QAQAGERRFLYVHLLPPHVPYTPPPPFNELFGARKRYDATLAYADAQLDALLDALGPLDDVALVVTSDHGEAFGEHGRILHGSMASKEMIHVPLVLHGPGL-QGDVRDDLVRTRDLAATVCEWLDV 690
            G RF +A A    TL S ASL TG+ P  HGA R  G  +G    TLAE     GFAT AF     + R  G A+GFD + +  PR  D    ++ P   +     +W +A  G+R FL++HL  PH PY  P    +   A  RYD  +A AD Q+  LLDAL   D   +V+ SDHGEAFGEHG I H        + VPL+L GPGL +G   +D V   D+A T+    D+
Sbjct:   68 GVRFERAFAPTPITLPSHASLMTGLYPPGHGA-RHNGMRVGMAPPTLAERFSRGGFATGAFVAAFPLDRRFGLARGFDAYGDQVPRGRDGRQASERPGHVVVDEALSWLKAHQGQRLFLWLHLFEPHAPYGDP---ADRRPATDRYDDEIAEADRQVRRLLDALPDRDQALIVLASDHGEAFGEHGEIAHSIFVYDTTLRVPLILSGPGLPRGIAIEDPVSLVDVAPTLLRRFDL 298          
BLAST of mRNA_M-pyrifera_M_contig81128.18975.1 vs. uniprot
Match: A0A523EDE3_9BACT (Tetratricopeptide repeat protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A523EDE3_9BACT)

HSP 1 Score: 138 bits (348), Expect = 7.030e-34
Identity = 95/239 (39.75%), Postives = 127/239 (53.14%), Query Frame = 1
Query:    1 GQRFAQAHATASYTLASTASLFTGMSPRAHGAEREVGHVLGADRVTLAEVLGERGFATAAFSLNPQVSRETGFAQGFDVFE-----YAPRDDFTYNQLPQG-FLERVTATWQAQAGERRFLYVHLLPPHVPYTPPPPFNELFGARKRYDATLAYADAQLDALLDAL--GPLDDVALVVTSDHGEAFGEHGRILHGSMASKEMIHVPLVLHGPGLQGDVRDDL-VRTRDLAATVCEWLDV 690
            G+ F  AHA A  TL S AS+ TG+ P  HG     G+ L A   T+A +L  +G+ATAAF     + R  G A GFD ++     +AP+  FT  + P    + R    W A  GE R ++VHL  PH PY P PP++  + A   Y   +A +DA+L  L++ +  GP  D  +V+TSDHGEA GEHG   HG  A +  + VPLVL+  G     RDD   R  D+  TV E   V
Sbjct:   70 GRVFDFAHAHAVVTLPSHASILTGLFPYDHGIRDNAGYRLDASTPTVATILQAQGWATAAFVSAFPLDRRYGLAHGFDRYDDEYDGFAPQS-FTPPERPGAETVRRALEWWDAHRGEPRMMWVHLFTPHYPYDPGPPWDADYAAAPYY-GDVARSDAELTPLIERVLDGPDVDTVVVLTSDHGEALGEHGEQTHGLFAYEATLKVPLVLYAKGAVKPSRDDRSARHVDILPTVLELTGV 306          
BLAST of mRNA_M-pyrifera_M_contig81128.18975.1 vs. uniprot
Match: A0A2V8CCU7_9BACT (Sulfatase domain-containing protein n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8CCU7_9BACT)

HSP 1 Score: 137 bits (344), Expect = 2.070e-33
Identity = 98/241 (40.66%), Postives = 127/241 (52.70%), Query Frame = 1
Query:    1 GQRFAQAHATASYTLASTASLFTGMSPRAHGAEREVGHVLGADRV-TLAEVLGERGFATAAFSLNPQVSRETGFAQGF----DVFEYAPRDDFTYNQLPQGFLE--RVTATWQAQAGERRFLYVHLLPPHVPYTPPPPFNELFGARKRYDATLAYADAQLDALLDALGP--LDDVALVVTSDHGEAFGEHGRILHGSMASKEMIHVPLVLHGPGLQGD--VRDDLVRTRDLAATVCEWLDV 690
            G  F  A A A  T+ S AS+ TG  P AHG     G +L +DRV TLA +L + G+ TAAF  +  +   TG A+GF    D FE   R   T + L +   E  R  A W A A    FL+VH   PH PY PPP F   F  R  YD  +A AD  +  ++ AL P    +  +VVT DHGE+ GEHG   HG +     +HVPL++ GPG+Q    VR+  VR  D+  TV + L+V
Sbjct:   69 GAVFLDATAHAPLTVPSHASILTGRYPTAHGVHDNAGFML-SDRVPTLAAMLHDAGYHTAAFVSSFVLRGSTGLARGFEAYNDRFEGMGRSHVTVSSLERRAPEVAREAARWIASAARPFFLWVHFYDPHAPYDPPPAFAAKFSGRP-YDGEVAAADFGVSLVIGALSPERRRETVIVVTGDHGESLGEHGESEHGILLYDATLHVPLIIQGPGVQSGLTVREQ-VRHVDIVPTVLDLLNV 306          
BLAST of mRNA_M-pyrifera_M_contig81128.18975.1 vs. uniprot
Match: A0A3E1KAD8_9GAMM (Sulfatase domain-containing protein n=1 Tax=Wenzhouxiangella sediminis TaxID=1792836 RepID=A0A3E1KAD8_9GAMM)

HSP 1 Score: 137 bits (344), Expect = 2.690e-33
Identity = 95/264 (35.98%), Postives = 138/264 (52.27%), Query Frame = 1
Query:    1 GQRFAQAHATASYTLASTASLFTGMSPRAHGAEREVGHVLGADRVTLAEVLGERGFATAA-FSLNPQVSRETGFAQGFDVFE--------------YAPRDDFTYNQLPQGFLERVTATWQAQAGERRF-LYVHLLPPHVPYTPPPPFNELFGARKRYDATLAYADAQLDALLDAL---GPLDDVALVVTSDHGEAFGEHGRILHGSMASKEMIHVPLVLHGPG----LQGDVRDDLVRTRDLAATVCEWLDVPWDARMAHGRS 723
            G RFA A + A  T  S +S+ TG+ P AHG       VL     TLAE+L + G+ATAA     P VSR  GF QGFD+F+                P+++  +++     +      W  Q G+  F L+VH   PH P+ PPPP+++L+ A   Y+  +AYAD++L  L++ L   G L+   +V+T+DHGE  GEH  I H  +A    +HVPL++  PG        V D+ V T D+  TV + L +   A + HG+S
Sbjct:   66 GVRFANAVSVAPITAPSHSSILTGLYPTAHGFRDNGLFVLEGRNRTLAEILKDEGYATAAAVGAFPVVSR-FGFDQGFDLFDDHLTGMFEDYQGERAVPKEELFFDERRAAQVNEAVIPWLQQQGDSPFFLWVHYFDPHQPFEPPPPYDQLY-ADDLYNGEIAYADSRLGHLIEQLRQMGELERTLIVMTADHGEGLGEHNEITHAVLAYDSTLHVPLIVRPPGDATGRVSRVIDERVGTVDIVPTVLDVLGLDVPAEL-HGQS 326          
BLAST of mRNA_M-pyrifera_M_contig81128.18975.1 vs. uniprot
Match: A0A2V7W7N2_9BACT (Sulfatase domain-containing protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7W7N2_9BACT)

HSP 1 Score: 130 bits (326), Expect = 9.180e-33
Identity = 93/240 (38.75%), Postives = 126/240 (52.50%), Query Frame = 1
Query:    1 GQRFAQAHATASYTLASTASLFTGMSPRAHGAEREVGHVLGADRVTL-AEVLGERGFATAAFSLNPQVSRETGFAQGFDVFEYAPRDDFTYNQLPQG----FLERVTATWQAQAGERRFLYVHLLPPHVPYTPPPPFNELFGARKRYDATLAYADAQLDALLDAL-----GPLDDVALVVTSDHGEAFGEHGRILHGSMASKEMIHVPLVLHGPGLQGDVRDDLVRTRDLAATVCEWLDV 690
            G+RF QA+AT   TLAS AS+ TG+ P  HG   E G  L +DRV L +E L   G+ TAAF     ++R  G A+GFDV+     DD T  +L +       +RV       + +  FL+VH   PH PY PP PF   F A+K Y   +A  D Q+  L+ A      GP    A+V+  DHGE  GEHG   HG++  +  +HVPL+L GPG+     D  V  R +  T+ +W  +
Sbjct:   31 GRRFRQAYATVPQTLASHASMLTGLYPAGHGVH-ENGRYL-SDRVPLLSERLHTAGYRTAAFVSAFALARRFGLARGFDVY-----DDQTPPRLAERRSAETTDRVLTYLSRPSSQPLFLWVHYYDPHYPYEPPEPFRTRF-AKKPYLGEIAAMDEQMGRLVAAFEQRIAGPK---AIVIVGDHGEGLGEHGEAQHGNLLYQATMHVPLLLLGPGIAPGTTDAPVSIRRVFHTMLDWASL 259          
BLAST of mRNA_M-pyrifera_M_contig81128.18975.1 vs. uniprot
Match: A0A2H5W8Z4_9BACT (Arylsulfatase n=1 Tax=bacterium HR11 TaxID=2035406 RepID=A0A2H5W8Z4_9BACT)

HSP 1 Score: 135 bits (339), Expect = 1.230e-32
Identity = 93/241 (38.59%), Postives = 124/241 (51.45%), Query Frame = 1
Query:    1 GQRFAQAHATASYTLASTASLFTGMSPRAHGAEREVGHVLGADRVTLAEVLGERGFATAAFSLNPQVSRETGFAQGFDVFE--YAPRDD---FTYNQLPQGFLERVTATWQAQAGERR-FLYVHLLPPHVPYTPPPPFNELFGARKRYDATLAYADAQLDALLDALGPL---DDVALVVTSDHGEAFGEHGRILHGSMASKEMIHVPLVLHGPGLQGDVRDDL-VRTRDLAATVCEWLDVP 693
            G  F +A A    TL S  S+FTG+ P  HG     G  +  D VT+AE L + G+ATAAF     + +  G AQGFDV++  YA R     F   +  +  ++   A    Q G+R  FL+VHL  PH PY PP  +     A+  Y   +AY D Q+  LLD L      D   +V+T+DHGE+ GEHG   HG  A    +HVPL++H PG+QG  R    V   DL  T+   L +P
Sbjct:   69 GYVFERAFAHTPLTLPSHTSIFTGLPPTDHGVHDNAGFRVRDDLVTMAEWLKQYGYATAAFIGAFPLDKRFGLAQGFDVYDQQYAARSPHRIFFAERKAEAVVDAALAWLARQTGDRPWFLWVHLFDPHQPYDPPAAYRTGRWAQDLYGGEVAYTDDQVGRLLDELRRRRWWDRTVVVLTADHGESLGEHGEPTHGLFAYNATLHVPLLVHRPGVQGTRRVTWPVSHSDLFPTIGGLLGLP 309          
BLAST of mRNA_M-pyrifera_M_contig81128.18975.1 vs. uniprot
Match: A0A523PBE7_9BACT (Sulfatase domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PBE7_9BACT)

HSP 1 Score: 134 bits (337), Expect = 2.390e-32
Identity = 95/231 (41.13%), Postives = 115/231 (49.78%), Query Frame = 1
Query:   40 TLASTASLFTGMSPRAHGAEREVGHVLGADRVTLAEVLGERGFATAAFSLNPQVSRETGFAQGFDVFEYAPRDDFTYNQLPQGFLERVTAT--------W-QAQAGERRFLYVHLLPPHVPYTPPPPFNELFGARKRYDATLAYADAQLDALLDAL---GPLDDVALVVTSDHGEAFGEHGRILHGSMASKEMIHVPLVLHGPGLQGDVR-DDLVRTRDLAATVCEWLDVP 693
            TL S ASL TG+ P +HGA     H L AD  TLAE L E+GFAT A      +    G  QGFD ++    DDF+       F    TA         W   +  ER FL++HL  PH  Y  P PF   F     YD  +AYADAQL ALL  L   G L +  +V+T+DHGEA GEHG   HG         VPL+L  P L+  +R   +V   D+  TV E L VP
Sbjct:   96 TLPSHASLLTGLHPFSHGARNNGTHYLAADVPTLAERLSEQGFATGAVVSAFVLDSRFGLDQGFDRYD----DDFSGGVGVTAFEGETTAEDSVARAIRWLDERRNERWFLWLHLFDPHADYRAPEPFAAQFPEAP-YDGEIAYADAQLGALLGRLHDRGELGETLIVITADHGEALGEHGETTHGVFVYDATTRVPLILSHPSLEAGLRVPAVVSLIDVLPTVLELLGVP 321          
BLAST of mRNA_M-pyrifera_M_contig81128.18975.1 vs. uniprot
Match: A0A523DFT4_9BACT (Tetratricopeptide repeat protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A523DFT4_9BACT)

HSP 1 Score: 132 bits (331), Expect = 1.630e-31
Identity = 95/239 (39.75%), Postives = 118/239 (49.37%), Query Frame = 1
Query:    1 GQRFAQAHATASYTLASTASLFTGMSPRAHGAEREVGHVLGADRVTLAEVLGERGFATAAFSLNPQVSRETGFAQGFDVFE--YAPRD---DFTYNQLPQGFLERVTATWQAQAGERRFLYVHLLPPHVPYTPPPPFNELFGARKRYDATLAYADAQLDALLDAL---GPLDDVALVVTSDHGEAFGEHGRILHGSMASKEMIHVPLVLH-GPGLQGDVRDDLVRTRDLAATVCEWLDV 690
            G RF  A A A+ TL S AS+ TG  P AHG        L   R+TLAEVL + G+ATAAF     + R  G  QGFD ++  Y   D   DF + +     +     TW  Q   R F +VHL  PHVPY  P PF   F     Y   +AY D  L   LD L   G LDD  +V+T+DHGE+ GEHG   HG  A    + VPL++  G  L+  V    V   D+  +V E L V
Sbjct:   97 GVRFESAFAHATMTLPSHASILTGQYPFAHGVRDNGAFRLDDSRLTLAEVLHDAGYATAAFVGAFVLDRRFGLGQGFDHYDDDYGASDQADDFHFVERRADQVLAPATTWVEQQDGRWFAWVHLFDPHVPYEAPDPFGARFPDEP-YRGEVAYVDQALGDALDRLAETGALDDTLIVLTADHGESLGEHGERTHGVFAYNATLRVPLIMAAGQALEPGVFAAPVGHVDIVPSVLELLGV 334          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81128.18975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E6R9T1_9GAMM3.950e-3636.64Sulfatase domain-containing protein n=1 Tax=Xantho... [more]
A0A2D6BPR0_9DELT5.810e-3440.17Sulfatase domain-containing protein n=1 Tax=Deltap... [more]
A0A7W1SCU3_9BACT6.490e-3440.85Sulfatase-like hydrolase/transferase n=1 Tax=Acido... [more]
A0A523EDE3_9BACT7.030e-3439.75Tetratricopeptide repeat protein n=1 Tax=Acidobact... [more]
A0A2V8CCU7_9BACT2.070e-3340.66Sulfatase domain-containing protein n=3 Tax=Acidob... [more]
A0A3E1KAD8_9GAMM2.690e-3335.98Sulfatase domain-containing protein n=1 Tax=Wenzho... [more]
A0A2V7W7N2_9BACT9.180e-3338.75Sulfatase domain-containing protein (Fragment) n=1... [more]
A0A2H5W8Z4_9BACT1.230e-3238.59Arylsulfatase n=1 Tax=bacterium HR11 TaxID=2035406... [more]
A0A523PBE7_9BACT2.390e-3241.13Sulfatase domain-containing protein n=1 Tax=Planct... [more]
A0A523DFT4_9BACT1.630e-3139.75Tetratricopeptide repeat protein n=1 Tax=Acidobact... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81128contigM-pyrifera_M_contig81128:111..932 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score120.2
Seed ortholog evalue1.4e-24
Seed eggNOG ortholog1047013.AQSP01000123_gene1531
Hectar predicted targeting categoryother localisation
EggNOG free text desc.arylsulfatase activity
EggNOG OGsCOG0457@1,COG0457@2,COG3119@1,COG3119@2
COG Functional cat.P
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
Exons2
Model size723
Cds size723
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816716.8553834-CDS-M-pyrifera_M_contig81128:110..4131622816716.8553834-CDS-M-pyrifera_M_contig81128:110..413Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81128 111..413 -
1692278137.2753835-CDS-M-pyrifera_M_contig81128:110..4131692278137.2753835-CDS-M-pyrifera_M_contig81128:110..413Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81128 111..413 -
1622816716.8663285-CDS-M-pyrifera_M_contig81128:512..9321622816716.8663285-CDS-M-pyrifera_M_contig81128:512..932Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81128 513..932 -
1692278137.2854762-CDS-M-pyrifera_M_contig81128:512..9321692278137.2854762-CDS-M-pyrifera_M_contig81128:512..932Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81128 513..932 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81128.18975.1prot_M-pyrifera_M_contig81128.18975.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig81128 111..932 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig81128.18975.1

>prot_M-pyrifera_M_contig81128.18975.1 ID=prot_M-pyrifera_M_contig81128.18975.1|Name=mRNA_M-pyrifera_M_contig81128.18975.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=241bp
GQRFAQAHATASYTLASTASLFTGMSPRAHGAEREVGHVLGADRVTLAEV
LGERGFATAAFSLNPQVSRETGFAQGFDVFEYAPRDDFTYNQLPQGFLER
VTATWQAQAGERRFLYVHLLPPHVPYTPPPPFNELFGARKRYDATLAYAD
AQLDALLDALGPLDDVALVVTSDHGEAFGEHGRILHGSMASKEMIHVPLV
LHGPGLQGDVRDDLVRTRDLAATVCEWLDVPWDARMAHGRS
back to top

mRNA from alignment at M-pyrifera_M_contig81128:111..932-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig81128.18975.1 ID=mRNA_M-pyrifera_M_contig81128.18975.1|Name=mRNA_M-pyrifera_M_contig81128.18975.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig81128:111..932- (Macrocystis pyrifera P11B4 male)
GGCCAGCGCTTCGCCCAAGCGCACGCGACCGCGTCCTACACGCTGGCCTC GACCGCTTCGCTGTTCACCGGCATGTCGCCGCGCGCCCACGGCGCCGAGC GCGAGGTCGGCCACGTGCTGGGCGCGGACCGCGTGACCCTCGCCGAGGTG CTCGGCGAGCGCGGCTTCGCGACCGCCGCCTTCAGCCTGAACCCCCAGGT CTCGCGCGAGACCGGATTCGCGCAGGGCTTCGACGTGTTCGAGTACGCGC CGCGCGACGACTTCACCTACAACCAGCTGCCCCAAGGCTTCCTCGAGCGC GTCACCGCGACCTGGCAAGCCCAGGCCGGCGAGCGGCGCTTCCTCTACGT GCACCTCCTGCCGCCGCACGTGCCATACACGCCGCCGCCGCCCTTCAACG AGCTCTTCGGCGCGCGCAAGGTCGACCGCAGCGAGGGCGGCCAAGCCTAC CTGCGCGCGCTCAACATGGAGGCGGTCTGGCTGACGCCCGACGACCCGCG GGTCGTGCGCGCCAAGCAGCGCTACGACGCGACGCTCGCCTATGCCGACG CGCAGCTCGACGCCCTGCTCGACGCGCTCGGCCCGCTGGACGACGTCGCG CTGGTCGTGACCAGTGACCACGGCGAAGCCTTTGGCGAGCACGGCCGGAT CCTGCACGGGTCGATGGCCTCCAAGGAGATGATCCACGTGCCGCTCGTCC TGCACGGTCCTGGCCTCCAAGGCGACGTGCGCGACGACCTGGTGCGCACC CGCGACCTCGCCGCCACGGTGTGCGAGTGGCTCGACGTGCCGTGGGACGC GCGCATGGCCCATGGCCGCTCG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig81128:111..932-

>mRNA_M-pyrifera_M_contig81128.18975.1 ID=mRNA_M-pyrifera_M_contig81128.18975.1|Name=mRNA_M-pyrifera_M_contig81128.18975.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1446bp|location=Sequence derived from alignment at M-pyrifera_M_contig81128:111..932- (Macrocystis pyrifera P11B4 male)
GGCCAGCGCTTCGCCCAAGCGCACGCGACCGCGTCCTACACGCTGGCCTC
GACCGCTTCGCTGTTCACCGGCATGTCGCCGCGCGCCCACGGCGCCGAGC
GCGAGGTCGGCCACGTGCTGGGCGCGGACCGCGTGACCCTCGCCGAGGTG
CTCGGCGAGCGCGGCTTCGCGACCGCCGCCTTCAGCCTGAACCCCCAGGT
CTCGCGCGAGACCGGATTCGCGCAGGGCTTCGACGTGTTCGAGTACGCGC
CGCGCGACGACTTCACCTACAACCAGCTGCCCCAAGGCTTCCTCGAGCGC
GTCACCGCGACCTGGCAAGCCCAGGCCGGCGAGCGGCGCTTCCTCTACGT
GCACCTCCTGCCGCCGCACGTGCCATACACGCCGCCGCCGCCCTTCAACG
AGCTCTTCGGCGCGCGCAAGGGCCAGCGCTTCGCCCAAGCGCACGCGACC
GCGTCCTACACGCTGGCCTCGACCGCTTCGCTGTTCACCGGCATGTCGCC
GCGCGCCCACGGCGCCGAGCGCGAGGTCGGCCACGTGCTGGGCGCGGACC
GCGTGACCCTCGCCGAGGTGCTCGGCGAGCGCGGCTTCGCGACCGCCGCC
TTCAGCCTGAACCCCCAGGTCTCGCGCGAGACCGGATTCGCGCAGGGCTT
CGACGTGTTCGAGTACGCGCCGCGCGACGACTTCACCTACAACCAGCTGC
CCCAAGGCTTCCTCGAGCGCGTCACCGCGACCTGGCAAGCCCAGGCCGGC
GAGCGGCGCTTCCTCTACGTGCACCTCCTGCCGCCGCACGTGCCATACAC
GCCGCCGCCGCCCTTCAACGAGCTCTTCGGCGCGCGCAAGCGCTACGACG
CGACGCTCGCCTATGCCGACGCGCAGCTCGACGCCCTGCTCGACGCGCTC
GGCCCGCTGGACGACGTCGCGCTGGTCGTGACCAGTGACCACGGCGAAGC
CTTTGGCGAGCACGGCCGGATCCTGCACGGGTCGATGGCCTCCAAGGAGA
TGATCCACGTGCCGCTCGTCCTGCACGGTCCTGGCCTCCAAGGCGACGTG
CGCGACGACCTGGTGCGCACCCGCGACCTCGCCGCCACGGTGTGCGAGTG
GCTCGACGTGCCGTGGGACGCGCGCATGGCCCATGGCCGCTCGCGCTACG
ACGCGACGCTCGCCTATGCCGACGCGCAGCTCGACGCCCTGCTCGACGCG
CTCGGCCCGCTGGACGACGTCGCGCTGGTCGTGACCAGTGACCACGGCGA
AGCCTTTGGCGAGCACGGCCGGATCCTGCACGGGTCGATGGCCTCCAAGG
AGATGATCCACGTGCCGCTCGTCCTGCACGGTCCTGGCCTCCAAGGCGAC
GTGCGCGACGACCTGGTGCGCACCCGCGACCTCGCCGCCACGGTGTGCGA
GTGGCTCGACGTGCCGTGGGACGCGCGCATGGCCCATGGCCGCTCG
back to top