mRNA_M-pyrifera_M_contig81072.18963.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A0G4EHQ9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHQ9_VITBC) HSP 1 Score: 109 bits (273), Expect = 7.570e-24 Identity = 74/247 (29.96%), Postives = 125/247 (50.61%), Query Frame = 1 Query: 1 LHLGPHMDGTHIMATGDAEALKQLLVEE-QYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARL-RALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGLLDPTEVADHWR-KLNSAFNLYAITRM--SLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARDEDGNGMDENLLIEESLTFLFAGHDV 726 +++GP +DG+ I+ DA+A+ L +PK P+ L ++G GL S G LWHR RKL+TP FHFA L+ I+ R+ + + SP ++ + F+ + L ++++ +F G DP + D W + A + I+ + LG+ + S + VH + + ++ + KR+ L AE+ + S +DL++ L+ D GM + ++ESLTFLFAGHD Sbjct: 101 VNMGPFVDGSQIVLVNDADAIATALENPASFPKVPMSLDGLKALIGEGLATSEGELWHRNRKLLTPLFHFAALREAFPCIIDNTVAFCDRMEQQIDASPN----KQAIVTRIPFNDLALRIVIDNAFSGEFDPHWMEDAWTVAVRRAMDCQMISFLLGPLGRFI-------SRQYVHLKVGQISDKIKGVVHKRKQLAAEASPKPSS--RRDLVSLLM-----DTEGMADQQRVDESLTFLFAGHDT 329
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A0G4ESS6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ESS6_VITBC) HSP 1 Score: 107 bits (267), Expect = 4.890e-23 Identity = 79/242 (32.64%), Postives = 125/242 (51.65%), Query Frame = 1 Query: 7 LGPHMDGTHIMATGDAEALKQLLVE-EQYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARLRALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGL-LDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARDEDGNGMDENLLIEESLTFLFAGHDV 726 +GP +G ++ A+ ++L + ++YPK P Y L ++G+GLV S+GALW RQRKL+TP FHF+ LK +H + + +V +L+ TD T S++TL V+ + +F D + W K+N + ++ + R LG + +PLPS V +R + + I +RR + RG AKDLL LL GN M + +++E+LTFL AGH+ Sbjct: 99 VGPDFEGRRVVGVNQPAAIAEVLADPDKYPKSPF-YETLVEMVGHGLVTSSGALWQRQRKLLTPLFHFSTLKAVHKFMTRNADRLVQQLQDKAAKSTD----GTTIGKHDISALTLRVMCDAAFARCEFDVDWLVWAWEKVNG-YPMFWMGRHLLG-HAWMYVPLPSGLGVQILVKRMRRRIINEIARRRAA-GSVDVRGEE--AKDLLDELLAV----GN-MPDKQIVDEALTFLVAGHET 325
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A0G4ESU5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ESU5_VITBC) HSP 1 Score: 103 bits (258), Expect = 8.050e-22 Identity = 75/242 (30.99%), Postives = 123/242 (50.83%), Query Frame = 1 Query: 7 LGPHMDGTHIMATGDAEALKQLLVEE-QYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARLRALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGL-LDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARDEDGNGMDENLLIEESLTFLFAGHDV 726 +GP G ++ A+ ++L ++ +YPK PL ++++ G GL S+GALWHRQRKL++P FHF L++ H + + +V +L D G T+N + S + L ++V+ +F D + +K+++ +Y + R LG + +PLPS + +R + I RRG A A G+SV KDLL L+ D M + +++E+L FL AGHD Sbjct: 95 IGPDFAGRRLVGLNQPAAIAEVLADQDKYPKAPLIETLVEIA-GYGLATSSGALWHRQRKLLSPLFHFGALRVAHKFMARNADRLVQQLLDDAAKSAD--GTATINRHQI-SDLMLRIVVDAAFSRCDFDVEWFSWACQKIDNP--MYWLGRQVLG-HAWMYVPLPSGLGIQILVKRMRRRIMCEIAHRRGAGA---AAGLSVDTKDLLDELMAVGD-----MPDRQIVDEALIFLIAGHDT 321
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A0G4F2U5_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F2U5_VITBC) HSP 1 Score: 102 bits (253), Expect = 4.810e-21 Identity = 76/242 (31.40%), Postives = 122/242 (50.41%), Query Frame = 1 Query: 10 GPHMDGTHIMATGDAEALKQLLVE-EQYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARLRALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGLLDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTE----SNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARDEDGNGMDENLLIEESLTFLFAGH 720 GP DG I+ D + +L + + +PK+P+ +V +G+GL+ + GA WHRQRKL+TP FHF LK +V + +VA++ TD T+ + F+ + L ++++ F G D + + W N Y I R+ LG D++PLPS +H + ++A +RD KRR E+E V A L +L + D G+ ++ ++ E+LTFL AGH Sbjct: 103 GPFFDGRRIVLINDPDVFATVLNDLKAFPKYPVH--ATEVYIGDGLLNAKGAQWHRQRKLLTPLFHFKALKQALPHMVRRVKTVVAQIDQEIDQNTD---NRTIRCRDTFNDLALQIMMDCVFPGKFDGPWMMEAWEISTRFSNTYFIGRLILGWPW-DLLPLPSALGLHLRVWRIAQRVKAAIRDT--KRRLQQQEAEQGSGKVEAGGNLVEMLVSTD----GISDHQVLLEALTFLGAGH 332
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A0G4F2B6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F2B6_VITBC) HSP 1 Score: 100 bits (249), Expect = 1.410e-20 Identity = 72/247 (29.15%), Postives = 129/247 (52.23%), Query Frame = 1 Query: 1 LHLGPHMDGTHIMATGDAEALKQLLVE-EQYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARLRALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGLLDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAES----EARGISVTAKDLLTSLLQARDEDGNGMDENLLIEESLTFLFAGHDV 726 +++GP + ++ D + + +L + E + K P + ++GNGL LSTGA+WHRQRKL+TP FHF+ LK + + A ++ + R+ + D G E A +TL++I++++F D + W+++ + + + RM +G + +P+PS V + A +R +V RR A+ +RG S KDLL L+ +G+ + ++++E+LTFL AGH+ Sbjct: 85 VNIGPSFNLGQAISINDPDMIAAVLEDNETFIKPPTS--AIKEIIGNGLALSTGAVWHRQRKLLTPMFHFSALKDVSVIMAANCKQTLDRIHQ---TIKDKGAFECTRAD--LGELTLSIIIDSAFSRSFDHDWMVWAWQRIFAYPVAFFLGRMMVGP-LWCRLPIPSGGGVRFHRQQIAAKIRQEMVIRRKERADGVDTHTSRG-SEGGKDLLDELIAV-----DGIPDEMIVDEALTFLLAGHET 317
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A0G4IEQ0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IEQ0_9ALVE) HSP 1 Score: 99.8 bits (247), Expect = 3.050e-20 Identity = 75/209 (35.89%), Postives = 108/209 (51.67%), Query Frame = 1 Query: 121 DVVLGNGLVLSTGALWHRQRKLITPSFHFAQLK-LMHTAIVAEGEEMVAR--LRALPLSPT-DFGGRETVN--AAEFFSSVTLAVIVETSFGGLLDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARD-EDGNGMDENLLIEESLTFLFAGHDV 726 + ++G LV S G LW RQRKL+TP FHF+ LK A V E ++ R ++A L D G + + A E FS ++L V+VET+FGG +D ++ D W + N + I RM LG V D P + LR V++ I RR + + RG +DL+T +L ARD E G M ++L+I+E+L L A Sbjct: 140 EPLIGQSLVTSEGKLWKRQRKLLTPLFHFSNLKDNALPASVRCSERIMVREIVKAQELKKNGDAKGLKNLQSGATEVFSLLSLGVLVETTFGGDVDVEKMRDLWGGATRSLNYWTILRMMLGSLV-DWWPFWPCRDALAACKKLRGTVQELINTRRADLKNGQQRG----TEDLITLMLLARDPETGEEMGDSLIIDEALLMLVASQQT 343
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A839J2G5_9ACTN (Cytochrome P450 n=3 Tax=unclassified Propioniciclava TaxID=2642922 RepID=A0A839J2G5_9ACTN) HSP 1 Score: 96.7 bits (239), Expect = 2.190e-19 Identity = 69/220 (31.36%), Postives = 100/220 (45.45%), Query Frame = 1 Query: 67 QLLVEEQYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARLRALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGLLDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARDEDGNGMDENLLIEESLTFLFAGHDV 726 QL + K G+ + G GL+ STG LW RQRKL+ P F + I+ + + +V R L S + V+ E +T ++I+ F D AD R + T +G ++ D +P PS + + +R + GLIAE A G T DLLT L+ ARD+DG M E+LL +ES+T FAGH+ Sbjct: 59 QLTQRRSFDKRASYDGVRRYLTGEGLIASTGELWKRQRKLMAPFFTPKGVLAYAQIILDDADRVVDRWAGLAASG------QVVDMGEEMMELTASIILRALFSTAAD----ADIVRLKGHVETMIGYTTRRMGPHLPDWLPTPSQRAYEHARDEVRGYIA-------GLIAERRASG--TTPNDLLTRLMDARDDDGAPMSESLLRDESITMFFAGHET 259
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A0G4EL23_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EL23_VITBC) HSP 1 Score: 97.1 bits (240), Expect = 2.380e-19 Identity = 72/264 (27.27%), Postives = 131/264 (49.62%), Query Frame = 1 Query: 1 LHLGPHMDGTHIMATGDAEALKQLLVEE--QYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLK-LMHTAIVAEGEEMVARLRALPLSP-----------------TDFGGRETVNAAEFFSSVTLAVIVETSFGGLLDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAK-DLLTSLLQARD-EDGNGMDENLLIEESLTFLFAGHDV 726 ++ G ++ G+H + EA++Q+ + + K ++ ++ GLV+S G W +RKL+TP FH+AQ++ + A VA+ + +A + D GG + A + F + L V+++ FG LD + W+ L +A Y I ++ LG+ + D +PLP + +R+ ++ I +RR AE +G K DL+T++++A+D E G + ++L+I E+LT L AGH+ Sbjct: 84 VYAGINVSGSHEVMAMSPEAVRQVTSRDTVDFVKPETFKNMISRIIPQGLVVSEGDEWRHERKLLTPLFHYAQIRDVALPATVAQVHKTIALIEKRRNQKDTADDDTEAKGSSVRWTVDEGGNPSTIAVDLFGHLALGVVIDGMFGSDLDREWMHSVWKDLFTANYGYLIGKLLLGR-LMDYLPLPPTVRMLRTIRQIRSTIQRLIDRRREETAE---KGDQAQDKGDLVTAMIKAKDPETGERLPDDLIISEALTMLLAGHET 343
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: UPI00069ADA0A (cytochrome P450 n=1 Tax=Methyloterricola oryzae TaxID=1495050 RepID=UPI00069ADA0A) HSP 1 Score: 96.7 bits (239), Expect = 2.400e-19 Identity = 82/246 (33.33%), Postives = 108/246 (43.90%), Query Frame = 1 Query: 25 GTHIMATGDAEALKQ--------LLVEEQYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARLRALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGLLDPTEVADHWRKLNSAFNL---YAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARD-EDGNGMDENLLIEESLTFLFAGHDV 726 GTH++ L Q L V+ P+ P G + +VLG GLV S+GALW RQR+LI P FH + + M I+ GE ++ R L G V+ E +TL +I T FG T V D L A YA M +P P N L L+ GLIA+ G+ DLL LL+ARD E G GMD+ L+ +E+LT AGH+ Sbjct: 52 GTHVLHMLSHPRLAQQALIDQPELFVKTYRPEQPRG---IALVLGQGLVTSSGALWKRQRRLIQPLFHRSSVGAMEDEIIGAGERLLERWNRL-------GDGSVVDVGEEMMRLTLEIITRTMFG-----TSVLDQVHVLGPALKTALEYAAQSMQNPFLRPVWVPTPGNLRFRRAKGILHRLIG-------GLIAQRRQGGMR--RGDLLDLLLEARDPESGQGMDDALIRDEALTVFAAGHET 273
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A6B2L5D6_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L5D6_9EUKA) HSP 1 Score: 95.9 bits (237), Expect = 3.160e-19 Identity = 65/238 (27.31%), Postives = 116/238 (48.74%), Query Frame = 1 Query: 19 MDGTHIMATGDAEALKQLLV--EEQYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARLRALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGLLDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARDEDGNGMDENLLIEESLTFLFAGHDV 726 M+G+ ++ D +A + +L E ++PK Y + V++G+G+V+S G +W + RKL+TP FHF ++ +V + R+R + A + F++ T +VI++ FG D V + +++N FN Y I +M G + D +PL S +H I K + +++ D+L+ L ++ EDG+ + E + ++ LTFLFAG D Sbjct: 1 MNGSVLLVLSDKDAAQHILSGKEGEFPKASFIYDLFTVMIGSGMVISEGEVWRKDRKLLTPFFHFRAIQDSFPIMVDSAVGFLDRVRDRQSEAA------WMPAKDLFATYTSSVILKFGFGDAFDVKTVNNMIKEMNVVFNYYFIGKMLFG-GLWDYLPLKSGLGMHMIKKKFLNFALPIIRKVKASPSQTP---------DMLSFLCHSKYEDGSEISEAHIADQCLTFLFAGEDT 222 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81072.18963.1 >prot_M-pyrifera_M_contig81072.18963.1 ID=prot_M-pyrifera_M_contig81072.18963.1|Name=mRNA_M-pyrifera_M_contig81072.18963.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=245bp MDGTHIMATGDAEALKQLLVEEQYPKHPLGYGILDVVLGNGLVLSTGALWback to top mRNA from alignment at M-pyrifera_M_contig81072:171..923+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81072.18963.1 ID=mRNA_M-pyrifera_M_contig81072.18963.1|Name=mRNA_M-pyrifera_M_contig81072.18963.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=753bp|location=Sequence derived from alignment at M-pyrifera_M_contig81072:171..923+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81072:171..923+ >mRNA_M-pyrifera_M_contig81072.18963.1 ID=mRNA_M-pyrifera_M_contig81072.18963.1|Name=mRNA_M-pyrifera_M_contig81072.18963.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1470bp|location=Sequence derived from alignment at M-pyrifera_M_contig81072:171..923+ (Macrocystis pyrifera P11B4 male)back to top |