mRNA_M-pyrifera_M_contig81072.18963.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig81072.18963.1
Unique NamemRNA_M-pyrifera_M_contig81072.18963.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A0G4EHQ9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHQ9_VITBC)

HSP 1 Score: 109 bits (273), Expect = 7.570e-24
Identity = 74/247 (29.96%), Postives = 125/247 (50.61%), Query Frame = 1
Query:    1 LHLGPHMDGTHIMATGDAEALKQLLVEE-QYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARL-RALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGLLDPTEVADHWR-KLNSAFNLYAITRM--SLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARDEDGNGMDENLLIEESLTFLFAGHDV 726
            +++GP +DG+ I+   DA+A+   L     +PK P+    L  ++G GL  S G LWHR RKL+TP FHFA L+     I+        R+ + +  SP     ++ +     F+ + L ++++ +F G  DP  + D W   +  A +   I+ +   LG+ +       S + VH +   +   ++  + KR+ L AE+  +  S   +DL++ L+     D  GM +   ++ESLTFLFAGHD 
Sbjct:  101 VNMGPFVDGSQIVLVNDADAIATALENPASFPKVPMSLDGLKALIGEGLATSEGELWHRNRKLLTPLFHFAALREAFPCIIDNTVAFCDRMEQQIDASPN----KQAIVTRIPFNDLALRIVIDNAFSGEFDPHWMEDAWTVAVRRAMDCQMISFLLGPLGRFI-------SRQYVHLKVGQISDKIKGVVHKRKQLAAEASPKPSS--RRDLVSLLM-----DTEGMADQQRVDESLTFLFAGHDT 329          
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A0G4ESS6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ESS6_VITBC)

HSP 1 Score: 107 bits (267), Expect = 4.890e-23
Identity = 79/242 (32.64%), Postives = 125/242 (51.65%), Query Frame = 1
Query:    7 LGPHMDGTHIMATGDAEALKQLLVE-EQYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARLRALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGL-LDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARDEDGNGMDENLLIEESLTFLFAGHDV 726
            +GP  +G  ++      A+ ++L + ++YPK P  Y  L  ++G+GLV S+GALW RQRKL+TP FHF+ LK +H  +    + +V +L+      TD     T       S++TL V+ + +F     D   +   W K+N  + ++ + R  LG +    +PLPS   V      +R  + + I +RR      + RG    AKDLL  LL      GN M +  +++E+LTFL AGH+ 
Sbjct:   99 VGPDFEGRRVVGVNQPAAIAEVLADPDKYPKSPF-YETLVEMVGHGLVTSSGALWQRQRKLLTPLFHFSTLKAVHKFMTRNADRLVQQLQDKAAKSTD----GTTIGKHDISALTLRVMCDAAFARCEFDVDWLVWAWEKVNG-YPMFWMGRHLLG-HAWMYVPLPSGLGVQILVKRMRRRIINEIARRRAA-GSVDVRGEE--AKDLLDELLAV----GN-MPDKQIVDEALTFLVAGHET 325          
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A0G4ESU5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ESU5_VITBC)

HSP 1 Score: 103 bits (258), Expect = 8.050e-22
Identity = 75/242 (30.99%), Postives = 123/242 (50.83%), Query Frame = 1
Query:    7 LGPHMDGTHIMATGDAEALKQLLVEE-QYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARLRALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGL-LDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARDEDGNGMDENLLIEESLTFLFAGHDV 726
            +GP   G  ++      A+ ++L ++ +YPK PL   ++++  G GL  S+GALWHRQRKL++P FHF  L++ H  +    + +V +L        D  G  T+N  +  S + L ++V+ +F     D    +   +K+++   +Y + R  LG +    +PLPS   +      +R  +   I  RRG  A   A G+SV  KDLL  L+   D     M +  +++E+L FL AGHD 
Sbjct:   95 IGPDFAGRRLVGLNQPAAIAEVLADQDKYPKAPLIETLVEIA-GYGLATSSGALWHRQRKLLSPLFHFGALRVAHKFMARNADRLVQQLLDDAAKSAD--GTATINRHQI-SDLMLRIVVDAAFSRCDFDVEWFSWACQKIDNP--MYWLGRQVLG-HAWMYVPLPSGLGIQILVKRMRRRIMCEIAHRRGAGA---AAGLSVDTKDLLDELMAVGD-----MPDRQIVDEALIFLIAGHDT 321          
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A0G4F2U5_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F2U5_VITBC)

HSP 1 Score: 102 bits (253), Expect = 4.810e-21
Identity = 76/242 (31.40%), Postives = 122/242 (50.41%), Query Frame = 1
Query:   10 GPHMDGTHIMATGDAEALKQLLVE-EQYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARLRALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGLLDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTE----SNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARDEDGNGMDENLLIEESLTFLFAGH 720
            GP  DG  I+   D +    +L + + +PK+P+     +V +G+GL+ + GA WHRQRKL+TP FHF  LK     +V   + +VA++       TD     T+   + F+ + L ++++  F G  D   + + W       N Y I R+ LG    D++PLPS   +H      +  ++A +RD   KRR    E+E     V A   L  +L + D    G+ ++ ++ E+LTFL AGH
Sbjct:  103 GPFFDGRRIVLINDPDVFATVLNDLKAFPKYPVH--ATEVYIGDGLLNAKGAQWHRQRKLLTPLFHFKALKQALPHMVRRVKTVVAQIDQEIDQNTD---NRTIRCRDTFNDLALQIMMDCVFPGKFDGPWMMEAWEISTRFSNTYFIGRLILGWPW-DLLPLPSALGLHLRVWRIAQRVKAAIRDT--KRRLQQQEAEQGSGKVEAGGNLVEMLVSTD----GISDHQVLLEALTFLGAGH 332          
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A0G4F2B6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F2B6_VITBC)

HSP 1 Score: 100 bits (249), Expect = 1.410e-20
Identity = 72/247 (29.15%), Postives = 129/247 (52.23%), Query Frame = 1
Query:    1 LHLGPHMDGTHIMATGDAEALKQLLVE-EQYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARLRALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGLLDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAES----EARGISVTAKDLLTSLLQARDEDGNGMDENLLIEESLTFLFAGHDV 726
            +++GP  +    ++  D + +  +L + E + K P     +  ++GNGL LSTGA+WHRQRKL+TP FHF+ LK +   + A  ++ + R+     +  D G  E   A      +TL++I++++F    D   +   W+++ +    + + RM +G  +   +P+PS   V      + A +R  +V RR   A+      +RG S   KDLL  L+       +G+ + ++++E+LTFL AGH+ 
Sbjct:   85 VNIGPSFNLGQAISINDPDMIAAVLEDNETFIKPPTS--AIKEIIGNGLALSTGAVWHRQRKLLTPMFHFSALKDVSVIMAANCKQTLDRIHQ---TIKDKGAFECTRAD--LGELTLSIIIDSAFSRSFDHDWMVWAWQRIFAYPVAFFLGRMMVGP-LWCRLPIPSGGGVRFHRQQIAAKIRQEMVIRRKERADGVDTHTSRG-SEGGKDLLDELIAV-----DGIPDEMIVDEALTFLLAGHET 317          
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A0G4IEQ0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IEQ0_9ALVE)

HSP 1 Score: 99.8 bits (247), Expect = 3.050e-20
Identity = 75/209 (35.89%), Postives = 108/209 (51.67%), Query Frame = 1
Query:  121 DVVLGNGLVLSTGALWHRQRKLITPSFHFAQLK-LMHTAIVAEGEEMVAR--LRALPLSPT-DFGGRETVN--AAEFFSSVTLAVIVETSFGGLLDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARD-EDGNGMDENLLIEESLTFLFAGHDV 726
            + ++G  LV S G LW RQRKL+TP FHF+ LK     A V   E ++ R  ++A  L    D  G + +   A E FS ++L V+VET+FGG +D  ++ D W     + N + I RM LG  V D  P    +        LR  V++ I  RR  +   + RG     +DL+T +L ARD E G  M ++L+I+E+L  L A    
Sbjct:  140 EPLIGQSLVTSEGKLWKRQRKLLTPLFHFSNLKDNALPASVRCSERIMVREIVKAQELKKNGDAKGLKNLQSGATEVFSLLSLGVLVETTFGGDVDVEKMRDLWGGATRSLNYWTILRMMLGSLV-DWWPFWPCRDALAACKKLRGTVQELINTRRADLKNGQQRG----TEDLITLMLLARDPETGEEMGDSLIIDEALLMLVASQQT 343          
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A839J2G5_9ACTN (Cytochrome P450 n=3 Tax=unclassified Propioniciclava TaxID=2642922 RepID=A0A839J2G5_9ACTN)

HSP 1 Score: 96.7 bits (239), Expect = 2.190e-19
Identity = 69/220 (31.36%), Postives = 100/220 (45.45%), Query Frame = 1
Query:   67 QLLVEEQYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARLRALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGLLDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARDEDGNGMDENLLIEESLTFLFAGHDV 726
            QL     + K     G+   + G GL+ STG LW RQRKL+ P F    +      I+ + + +V R   L  S       + V+  E    +T ++I+   F    D    AD  R       +   T   +G ++ D +P PS +      + +R  +        GLIAE  A G   T  DLLT L+ ARD+DG  M E+LL +ES+T  FAGH+ 
Sbjct:   59 QLTQRRSFDKRASYDGVRRYLTGEGLIASTGELWKRQRKLMAPFFTPKGVLAYAQIILDDADRVVDRWAGLAASG------QVVDMGEEMMELTASIILRALFSTAAD----ADIVRLKGHVETMIGYTTRRMGPHLPDWLPTPSQRAYEHARDEVRGYIA-------GLIAERRASG--TTPNDLLTRLMDARDDDGAPMSESLLRDESITMFFAGHET 259          
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A0G4EL23_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EL23_VITBC)

HSP 1 Score: 97.1 bits (240), Expect = 2.380e-19
Identity = 72/264 (27.27%), Postives = 131/264 (49.62%), Query Frame = 1
Query:    1 LHLGPHMDGTHIMATGDAEALKQLLVEE--QYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLK-LMHTAIVAEGEEMVARLRALPLSP-----------------TDFGGRETVNAAEFFSSVTLAVIVETSFGGLLDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAK-DLLTSLLQARD-EDGNGMDENLLIEESLTFLFAGHDV 726
            ++ G ++ G+H +     EA++Q+   +   + K      ++  ++  GLV+S G  W  +RKL+TP FH+AQ++ +   A VA+  + +A +                         D GG  +  A + F  + L V+++  FG  LD   +   W+ L +A   Y I ++ LG+ + D +PLP    +      +R+ ++  I +RR   AE   +G     K DL+T++++A+D E G  + ++L+I E+LT L AGH+ 
Sbjct:   84 VYAGINVSGSHEVMAMSPEAVRQVTSRDTVDFVKPETFKNMISRIIPQGLVVSEGDEWRHERKLLTPLFHYAQIRDVALPATVAQVHKTIALIEKRRNQKDTADDDTEAKGSSVRWTVDEGGNPSTIAVDLFGHLALGVVIDGMFGSDLDREWMHSVWKDLFTANYGYLIGKLLLGR-LMDYLPLPPTVRMLRTIRQIRSTIQRLIDRRREETAE---KGDQAQDKGDLVTAMIKAKDPETGERLPDDLIISEALTMLLAGHET 343          
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: UPI00069ADA0A (cytochrome P450 n=1 Tax=Methyloterricola oryzae TaxID=1495050 RepID=UPI00069ADA0A)

HSP 1 Score: 96.7 bits (239), Expect = 2.400e-19
Identity = 82/246 (33.33%), Postives = 108/246 (43.90%), Query Frame = 1
Query:   25 GTHIMATGDAEALKQ--------LLVEEQYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARLRALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGLLDPTEVADHWRKLNSAFNL---YAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARD-EDGNGMDENLLIEESLTFLFAGHDV 726
            GTH++       L Q        L V+   P+ P G   + +VLG GLV S+GALW RQR+LI P FH + +  M   I+  GE ++ R   L       G    V+  E    +TL +I  T FG     T V D    L  A      YA   M         +P P N         L  L+        GLIA+    G+     DLL  LL+ARD E G GMD+ L+ +E+LT   AGH+ 
Sbjct:   52 GTHVLHMLSHPRLAQQALIDQPELFVKTYRPEQPRG---IALVLGQGLVTSSGALWKRQRRLIQPLFHRSSVGAMEDEIIGAGERLLERWNRL-------GDGSVVDVGEEMMRLTLEIITRTMFG-----TSVLDQVHVLGPALKTALEYAAQSMQNPFLRPVWVPTPGNLRFRRAKGILHRLIG-------GLIAQRRQGGMR--RGDLLDLLLEARDPESGQGMDDALIRDEALTVFAAGHET 273          
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Match: A0A6B2L5D6_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L5D6_9EUKA)

HSP 1 Score: 95.9 bits (237), Expect = 3.160e-19
Identity = 65/238 (27.31%), Postives = 116/238 (48.74%), Query Frame = 1
Query:   19 MDGTHIMATGDAEALKQLLV--EEQYPKHPLGYGILDVVLGNGLVLSTGALWHRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARLRALPLSPTDFGGRETVNAAEFFSSVTLAVIVETSFGGLLDPTEVADHWRKLNSAFNLYAITRMSLGKNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAKDLLTSLLQARDEDGNGMDENLLIEESLTFLFAGHDV 726
            M+G+ ++   D +A + +L   E ++PK    Y +  V++G+G+V+S G +W + RKL+TP FHF  ++     +V      + R+R              + A + F++ T +VI++  FG   D   V +  +++N  FN Y I +M  G  + D +PL S   +H             I K +   +++          D+L+ L  ++ EDG+ + E  + ++ LTFLFAG D 
Sbjct:    1 MNGSVLLVLSDKDAAQHILSGKEGEFPKASFIYDLFTVMIGSGMVISEGEVWRKDRKLLTPFFHFRAIQDSFPIMVDSAVGFLDRVRDRQSEAA------WMPAKDLFATYTSSVILKFGFGDAFDVKTVNNMIKEMNVVFNYYFIGKMLFG-GLWDYLPLKSGLGMHMIKKKFLNFALPIIRKVKASPSQTP---------DMLSFLCHSKYEDGSEISEAHIADQCLTFLFAGEDT 222          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81072.18963.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0G4EHQ9_VITBC7.570e-2429.96Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A0G4ESS6_VITBC4.890e-2332.64Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A0G4ESU5_VITBC8.050e-2230.99Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A0G4F2U5_VITBC4.810e-2131.40Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A0G4F2B6_VITBC1.410e-2029.15Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A0G4IEQ0_9ALVE3.050e-2035.89Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A839J2G5_9ACTN2.190e-1931.36Cytochrome P450 n=3 Tax=unclassified Propionicicla... [more]
A0A0G4EL23_VITBC2.380e-1927.27Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
UPI00069ADA0A2.400e-1933.33cytochrome P450 n=1 Tax=Methyloterricola oryzae Ta... [more]
A0A6B2L5D6_9EUKA3.160e-1927.31Uncharacterized protein n=1 Tax=Arcella intermedia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81072contigM-pyrifera_M_contig81072:171..923 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score94.0
Seed ortholog evalue1.1e-16
Seed eggNOG ortholog3055.EDP09860
Hectar predicted targeting categoryother localisation
EggNOG free text desc.cytochrome P450
EggNOG OGs34H59@3041,37RDY@33090,COG2124@1,KOG0157@2759
COG Functional cat.Q
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Exons1
Model size753
Cds size735
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816716.3860776-UTR-M-pyrifera_M_contig81072:170..1881622816716.3860776-UTR-M-pyrifera_M_contig81072:170..188Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig81072 171..188 +
1692278137.0519352-UTR-M-pyrifera_M_contig81072:170..1881692278137.0519352-UTR-M-pyrifera_M_contig81072:170..188Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig81072 171..188 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816716.397336-CDS-M-pyrifera_M_contig81072:188..9231622816716.397336-CDS-M-pyrifera_M_contig81072:188..923Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81072 189..923 +
1692278137.0663548-CDS-M-pyrifera_M_contig81072:188..9231692278137.0663548-CDS-M-pyrifera_M_contig81072:188..923Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81072 189..923 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81072.18963.1prot_M-pyrifera_M_contig81072.18963.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig81072 189..923 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig81072.18963.1

>prot_M-pyrifera_M_contig81072.18963.1 ID=prot_M-pyrifera_M_contig81072.18963.1|Name=mRNA_M-pyrifera_M_contig81072.18963.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=245bp
MDGTHIMATGDAEALKQLLVEEQYPKHPLGYGILDVVLGNGLVLSTGALW
HRQRKLITPSFHFAQLKLMHTAIVAEGEEMVARLRALPLSPTDFGGRETV
NAAEFFSSVTLAVIVETSFGGLLDPTEVADHWRKLNSAFNLYAITRMSLG
KNVNDMIPLPSNKTVHTESNALRALVRDAIVKRRGLIAESEARGISVTAK
DLLTSLLQARDEDGNGMDENLLIEESLTFLFAGHDVRRQNAPPT*
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mRNA from alignment at M-pyrifera_M_contig81072:171..923+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig81072.18963.1 ID=mRNA_M-pyrifera_M_contig81072.18963.1|Name=mRNA_M-pyrifera_M_contig81072.18963.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=753bp|location=Sequence derived from alignment at M-pyrifera_M_contig81072:171..923+ (Macrocystis pyrifera P11B4 male)
CTGCACCTTGGCCCACATATGGACGGCACCCATATTATGGCCACTGGCGA TGCTGAGGCATTGAAGCAGCTGCTCGTCGAGGAGCAGTACCCCAAGCATC CCCTCGGCTACGGAATTCTCGATGTCGTGCTTGGAAACGGCCTGGTCCTG AGTACTGGTGCTCTGTGGCATCGCCAGAGGAAGCTCATCACTCCCAGCTT CCACTTTGCTCAGCTGAAGCTGATGCACACTGCCATTGTGGCAGAGGGAG AAGAGATGGTTGCTCGACTGAGAGCACTGCCCCTGTCTCCCACTGACTTC GGTGGGAGGGAGACTGTGAACGCTGCTGAGTTCTTCAGCAGCGTTACTCT GGCAGTCATTGTGGAGACTTCGTTTGGAGGCCTCCTCGACCCAACGGAAG TGGCCGACCACTGGCGTAAGCTCAATAGTGCCTTCAACCTTTACGCAATA ACGAGGATGAGTCTTGGCAAGAACGTGAACGATATGATCCCTTTACCCTC CAACAAAACTGTTCACACTGAGTCGAATGCTCTCAGAGCTCTCGTTCGTG ACGCCATTGTCAAGAGGAGAGGACTCATTGCCGAAAGTGAGGCTCGGGGC ATCTCGGTCACGGCCAAGGATCTTCTGACCTCACTTCTCCAGGCTAGAGA TGAGGATGGTAATGGGATGGATGAGAACCTCCTCATTGAAGAGAGCCTCA CTTTCCTCTTCGCAGGGCATGACGTACGCAGACAAAACGCTCCCCCCACG TGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig81072:171..923+

>mRNA_M-pyrifera_M_contig81072.18963.1 ID=mRNA_M-pyrifera_M_contig81072.18963.1|Name=mRNA_M-pyrifera_M_contig81072.18963.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1470bp|location=Sequence derived from alignment at M-pyrifera_M_contig81072:171..923+ (Macrocystis pyrifera P11B4 male)
ATGGACGGCACCCATATTATGGCCACTGGCGATGCTGAGGCATTGAAGCA
GCTGCTCGTCGAGGAGCAGTACCCCAAGCATCCCCTCGGCTACGGAATTC
TCGATGTCGTGCTTGGAAACGGCCTGGTCCTGAGTACTGGTGCTCTGTGG
CATCGCCAGAGGAAGCTCATCACTCCCAGCTTCCACTTTGCTCAGCTGAA
GCTGATGCACACTGCCATTGTGGCAGAGGGAGAAGAGATGGTTGCTCGAC
TGAGAGCACTGCCCCTGTCTCCCACTGACTTCGGTGGGAGGGAGACTGTG
AACGCTGCTGAGTTCTTCAGCAGCGTTACTCTGGCAGTCATTGTGGAGAC
TTCGTTTGGAGGCCTCCTCGACCCAACGGAAGTGGCCGACCACTGGCGTA
AGCTCAATAGTGCCTTCAACCTTTACGCAATAACGAGGATGAGTCTTGGC
AAGAACGTGAACGATATGATCCCTTTACCCTCCAACAAAACTGTTCACAC
TGAGTCGAATGCTCTCAGAGCTCTCGTTCGTGACGCCATTGTCAAGAGGA
GAGGACTCATTGCCGAAAGTGAGGCTCGGGGCATCTCGGTCACGGCCAAG
GATCTTCTGACCTCACTTCTCCAGGCTAGAGATGAGGATGGTAATGGGAT
GGATGAGAACCTCCTCATTGAAGAGAGCCTCACTTTCCTCTTCGCAGGGC
ATGACGTACGCAGACAAAACGCTCCCCCCACGTGAATGGACGGCACCCAT
ATTATGGCCACTGGCGATGCTGAGGCATTGAAGCAGCTGCTCGTCGAGGA
GCAGTACCCCAAGCATCCCCTCGGCTACGGAATTCTCGATGTCGTGCTTG
GAAACGGCCTGGTCCTGAGTACTGGTGCTCTGTGGCATCGCCAGAGGAAG
CTCATCACTCCCAGCTTCCACTTTGCTCAGCTGAAGCTGATGCACACTGC
CATTGTGGCAGAGGGAGAAGAGATGGTTGCTCGACTGAGAGCACTGCCCC
TGTCTCCCACTGACTTCGGTGGGAGGGAGACTGTGAACGCTGCTGAGTTC
TTCAGCAGCGTTACTCTGGCAGTCATTGTGGAGACTTCGTTTGGAGGCCT
CCTCGACCCAACGGAAGTGGCCGACCACTGGCGTAAGCTCAATAGTGCCT
TCAACCTTTACGCAATAACGAGGATGAGTCTTGGCAAGAACGTGAACGAT
ATGATCCCTTTACCCTCCAACAAAACTGTTCACACTGAGTCGAATGCTCT
CAGAGCTCTCGTTCGTGACGCCATTGTCAAGAGGAGAGGACTCATTGCCG
AAAGTGAGGCTCGGGGCATCTCGGTCACGGCCAAGGATCTTCTGACCTCA
CTTCTCCAGGCTAGAGATGAGGATGGTAATGGGATGGATGAGAACCTCCT
CATTGAAGAGAGCCTCACTTTCCTCTTCGCAGGGCATGACGTACGCAGAC
AAAACGCTCCCCCCACGTGA
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