mRNA_M-pyrifera_M_contig81070.18961.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig81070.18961.1
Unique NamemRNA_M-pyrifera_M_contig81070.18961.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig81070.18961.1 vs. uniprot
Match: A0A3D1GCE3_9BACT (Uncharacterized protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1GCE3_9BACT)

HSP 1 Score: 244 bits (622), Expect = 1.840e-74
Identity = 137/296 (46.28%), Postives = 204/296 (68.92%), Query Frame = 1
Query:    1 FEGAVNADAYQNIIVQAKSETETMMGFAATKIENGNSYTIKPIDTESSAETKVFAELVASGNSEIVNKSEIETVITSTNAATVNSSISXXXXXXXALENSAKVRTEFFKNEFEGEANTKLEAVASAMIDAQTKLXXXXASATSVEAREEAYATFRSDFTSAYLDAEIKASTAAKAVEMWGRVFINSTNSASSEVKSEMNIQVSLATATIIDAAVQAEMEAAGAAQSSRDAAVQAGTTLKSEINASAGIMADIRTAFENYNEEVKTSLENDSNFSAAAVIAVDGEINSASGAKAIFD 888
            FE  V+A  YQNI+V A++  E M    + +IEN  SY +KP+  ESSAETKVFAEL A+G++++V +SEIE VI S  ++ +NS+ S       +L+ +A+VR  + + EF  EA+ K++ + ++ ++AQ +L     +ATS++A+EEAY TF      AYLDAE+KAST AK  EMWGRV +N++   S++ K+E N Q+S+ T+T++DAAV AE EAA   +S+R A  QAG  L++ I  S G+ ++I  AFE Y++EV+T+LEND+NFS+  VI +D +INS +GAK+ F+
Sbjct:   84 FELMVDASMYQNIVVMAENNAEVMYSMTSEQIENSQSYMVKPVSVESSAETKVFAELYANGDADMVMRSEIEAVINSAVSSEINSNSSAVADMAASLKTAAEVRASYLQEEFNSEASAKMDEIFTSSLNAQIQLENSLNAATSLQAQEEAYDTFNQAIIDAYLDAEVKASTTAKLFEMWGRVLVNNSTELSADAKNEFNKQISIYTSTVVDAAVMAEAEAANVEESTRTAIAQAGADLEATIRISTGVASEIEAAFEEYHDEVRTALENDANFSSEIVIGIDTQINSTTGAKSDFE 379          
BLAST of mRNA_M-pyrifera_M_contig81070.18961.1 vs. uniprot
Match: UPI000369D30C (hypothetical protein n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI000369D30C)

HSP 1 Score: 230 bits (586), Expect = 4.670e-69
Identity = 133/310 (42.90%), Postives = 211/310 (68.06%), Query Frame = 1
Query:    1 FEGAVNADAYQNIIVQAKSETETMMGFAATKIENGNSYTIKPIDTESSAETKVFAELVASGNSEIVNKSEIETVITSTNAATVNSSISXXXXXXXALENSAKVRTEFFKNEFEGEANTKLEAVASAMIDAQTKLXXXXASATSVEAREEAYATFRSDFTSAYLDAEIKASTAAKAVEMWGRVFINSTNSASSEVKSEMNIQVSLATATIIDAAVQAEMEAAGAAQSSRDAAVQAGTTLKSEINASAGIMADIRTAFENYNEEVKTSLENDSNFSAAAVIAVDGEINSASGAKAIFDNSIATRVSANLVLE 930
            F  + +A+  Q+ +V A++ +   MGF +  +ENG++ TIKPID ES+AE+ V+AELVA+G+++IV K++IE +ITS  A+ +N+S S       AL++SA+ R EFF++E EG A  KLEA    + DAQ +L     SA++ E    AY  F     +AY +A+++A+ AA+A+E+WGR+ +N+ +S S+E ++ +  Q S+  A  IDAAV+AE EA+  +  S+ A   AG TLK+ I  +AG+ AD+  AFE+Y EEV T+++ND+N S+  V++VD EIN+ +GAK IFD+++A+ V+A++ L+
Sbjct:   83 FNLSFDANTAQHYVVVAQNGSSETMGFVSASLENGDNVTIKPIDFESTAESNVYAELVANGSADIVTKNDIEAMITSRVASEINNSTSAAAKFATALKSSAEARAEFFRSEVEGNAEEKLEASLQILADAQARLEADLNSASTAEQEAAAYELFVETSANAYANADVEANKAAQAIELWGRLAVNNVSSVSTEAENSVREQTSMMAAIAIDAAVRAEAEASEMSSESKQAIADAGATLKANIRTAAGVKADVEAAFESYKEEVNTTMQNDANVSSEFVVSVDTEINATTGAKTIFDSAVASAVTADVALD 392          
BLAST of mRNA_M-pyrifera_M_contig81070.18961.1 vs. uniprot
Match: A0A350PFB4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A350PFB4_9BACT)

HSP 1 Score: 206 bits (523), Expect = 1.020e-61
Identity = 118/261 (45.21%), Postives = 174/261 (66.67%), Query Frame = 1
Query:   73 MGFAATKIENGNSYTIKPIDTESSAETKVFAELVASGNSEIVNKSEIETVITSTNAATVNSSISXXXXXXXALENSAKVRTEFFKNEFEGEANTKLEAVASAMIDAQTKLXXXXASATSVEAREEAYATFRSDFTSAYLDAEIKASTAAKAVEMWGRVFINSTNSASSEVKSEMNIQVSLATATIIDAAVQAEMEAAGAAQSSRDAAVQAGTTLKSEINASAGIMADIRTAFENYNEEVKTSLENDSNFSAAAVIAVDGEI 855
            MGF +T++ENG S  +KPIDTES+AE+ VFA LVA G++++V KS+IE ++TSTN + V +S S       AL +SA+ R +FF NE EG    KL A    + DAQT+L    ++A+S +A  EAY  F     +A++ A ++A+ AA+A+E+WGRV +N+ NSAS+E+K+ +  Q S+     IDAAV+AE EA+  +  S+ A   AG  LK+ +  + G+ AD+  AFENY EEV+T++ENDS+  A  V++V+ EI
Sbjct:    1 MGFLSTQVENGQSIQLKPIDTESTAESNVFARLVAQGDADLVTKSDIEAMVTSTNESEVRNSASLASQFAVALASSAEARADFFANEVEGNGEEKLNATLEILADAQTRLEADLSAASSTQAETEAYDLFLETSANAFVSAGVEANKAAQAIEIWGRVLVNNINSASTEIKNSVRSQTSIMAGIAIDAAVRAEAEASEMSNESKQAIADAGVQLKAALRTAVGVKADVEAAFENYQEEVQTAMENDSSIEANFVVSVNTEI 261          
BLAST of mRNA_M-pyrifera_M_contig81070.18961.1 vs. uniprot
Match: A0A6A8Q8G0_9BACT (Uncharacterized protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q8G0_9BACT)

HSP 1 Score: 207 bits (526), Expect = 4.200e-60
Identity = 122/310 (39.35%), Postives = 200/310 (64.52%), Query Frame = 1
Query:    1 FEGAVNADAYQNIIVQAKSETETMMGFAATKIENGNSYTIKPIDTESSAETKVFAELVASGNSEIVNKSEIETVITSTNAATVNSSISXXXXXXXALENSAKVRTEFFKNEFEGEANTKLEAVASAMIDAQTKLXXXXASATSVEAREEAYATFRSDFTSAYLDAEIKASTAAKAVEMWGRVFINSTNSASSEVKSEMNIQVSLATATIIDAAVQAEMEAAGAAQSSRDAAVQAGTTLKSEINASAGIMADIRTAFENYNEEVKTSLENDSNFSAAAVIAVDGEINSASGAKAIFDNSIATRVSANLVLE 930
            F+  V+A+A Q+I + A++E +   G+  +++ NG   TIKPID+ES+AETKVFAE+VASG+++IV KS+IE +++S ++A++    S        LE +A+ R E++  + + EA + LE     ++DAQ +L     S+T+VE  E +Y  F     +A++ A +     A+ VEMWGR++ NS  SAS+E++++     S+  +  ID AVQ E +AAG + SS  A + AG  LKS+I ASAG+ ++I  AF+ Y++EV+ ++ENDS+ SA  V+ VD  IN++ G K+IF+ SI+    +++V++
Sbjct:   86 FQLHVDAEAAQHIAIVAENEGQQWRGYITSEVSNGQFVTIKPIDSESTAETKVFAEVVASGSADIVQKSDIEAIVSSNSSASIMXXXSAVSTIAAGLETAAEARVEYYNEKMDSEAQSSLEQTYDLLVDAQLQLESELESSTTVEQEEASYEVFFESTINAFMSAGLNEEQTAEVVEMWGRIYTNSVISASTEIENDARANASIIASLAIDNAVQTEAKAAGMSDSSIQAIIDAGAQLKSDIKASAGVESNIEAAFKAYHDEVRATMENDSSMSATLVVNVDTAINASGGFKSIFETSISGVFKSDVVVD 395          
BLAST of mRNA_M-pyrifera_M_contig81070.18961.1 vs. uniprot
Match: A0A521AGK6_9BACT (Uncharacterized protein n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521AGK6_9BACT)

HSP 1 Score: 199 bits (505), Expect = 5.200e-57
Identity = 121/299 (40.47%), Postives = 184/299 (61.54%), Query Frame = 1
Query:    1 FEGAVNADAYQNIIVQAKSETETMMGFAATKIENGNSYTIKPIDTESSAETKVFAELVASGNSEIVNKSEIETVITSTNAATVNSSISXXXXXXXALENSAKVRTEFFKNEFEGEANTKLEAVASAMIDAQTKLXXXXASATSVEAREEAYATFRSDFTSAYLDAEIKASTAAKAVEMWGRVFINSTNSASSEVKSEMNIQVSLATATIIDAAVQAEMEAAGAAQSSRDAAVQAGTTLKSEINASAGIMADIRTAFENYNEEVKTSLENDSNFSAAAVIAVDGEINSASGAKAIFDNSI 897
            F   V+A+   NI V A++E +   G+ +++IENG +YT+K ++TE +AE++V+AE++ASGNS+IV KS+IE +I+S  AA + S  S       +LE++A+ R EFF    E  +   LE     + +AQ +L     + T+ EAR+EAY  F      AY  AE++AS+ AKA+EMW RV INS +   ++V+ +  +  S  TA  +D AVQAE +      SS++A   AG  L+S I  S GI  DI  AFE+Y+E++++ +E+D  F AA ++ +D +IN  +GAKA F  SI
Sbjct:   86 FTLTVDAETANNIAVVAENEGQEFKGYLSSEIENGQTYTLKTLNTEYTAESEVYAEVIASGNSDIVQKSDIEAMISSEAAANIESDASAAANIASSLEHAAEARAEFFAVHVENNSQAALETTYEELAEAQVRLEAELEANTNAEARQEAYEVFTQSIVDAYAAAELEASSTAKAIEMWSRVAINSMSDVEADVREDARLHASTITAIALDLAVQAEADEMN--DSSQEAIADAGLELQSAIETSNGIQGDIEAAFESYHEDIRSIIESDGVFEAALILEIDSQINGPNGAKADFSGSI 382          
BLAST of mRNA_M-pyrifera_M_contig81070.18961.1 vs. uniprot
Match: A0A1B6Y745_9BACT (Uncharacterized protein n=1 Tax=Balneola sp. EhC07 TaxID=1849360 RepID=A0A1B6Y745_9BACT)

HSP 1 Score: 191 bits (484), Expect = 6.620e-54
Identity = 126/309 (40.78%), Postives = 185/309 (59.87%), Query Frame = 1
Query:    1 FEGAVNADAYQNIIVQAKSETETMMGFAATKIENGNSYTIKPIDTESSAETKVFAELVASGNSEIVNKSEIETVITSTNAATVNSSISXXXXXXXALENSAKVRTEFFKNEFEGEANTKLEAVASAMIDAQTKLXXXXASATSVEAREEAYATFRSDFTSAYLDAEIKASTAAKAVEMWGRVFINSTNSASSEVKSEMNIQVSLATATIIDAAVQAEMEAAGAAQSSRDAAVQAGTTLKSEINASAGIMADIRTAFENYNEEVKTSLENDSNFSAAAVIAVDGEINSASGAKAIFDNSIATRVSANLVL 927
            F  + +A+A QN +V A++     MGF +  +ENG +  +KPID ES+AE+ VFA LVA G++++V KS+IET++T+ N + V S+ S       +L  SA+ R +FF NE E                     XXXX           AY  F     SA++ A ++A+ AA+A+E+WGRV IN+ NSAS EV++ +  Q S+     IDAAV+AE EA+  +  S+     AG TLK+ +  + G+ AD+ TAFE Y EEV+T++E+DS+  A  VI V+ EINS +GAK IF+N+I++  SA+L L
Sbjct:   82 FSLSFDANAAQNFVVVAENNGSEAMGFLSANVENGQTILLKPIDNESTAESNVFARLVAQGDADLVTKSDIETMVTAANESEVRSNTSLASQFATSLXXSAEARADFFANEVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYDLFIETTASAFVSAGVEANKAAQAIEVWGRVMINNINSASEEVENSVRTQTSIMAGIAIDAAVRAEAEASEMSDESKQTIADAGVTLKAALRTAVGVKADVETAFEEYQEEVQTTMESDSSVEANFVITVNTEINSQTGAKTIFENAISSTTSADLAL 390          
BLAST of mRNA_M-pyrifera_M_contig81070.18961.1 vs. uniprot
Match: UPI00036E4755 (hypothetical protein n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI00036E4755)

HSP 1 Score: 177 bits (449), Expect = 9.460e-49
Identity = 113/288 (39.24%), Postives = 174/288 (60.42%), Query Frame = 1
Query:   13 VNADAYQNIIVQAKSETETMMGFAATKIENGNSYTIKPIDTESSAETKVFAELVASGNSEIVNKSEIETVITSTNAATVNSSISXXXXXXXALENSAKVRTEFFKNEFEGEANTKLEAVASAMIDAQTKLXXXXASATSVEAREEAYATFRSDFTSAYLDAEIKASTAAKAVEMWGRVFINSTNSASSEVKSEMNIQVSLATATIIDAAVQAEMEAAGAAQSSRDAAVQAGTTLKSEINASAGIMADIRTAFENYNEEVKTSLENDSNFSAAAVIAVDGEINSASGAK 876
            V+A++YQ+I+V A+ E +   GF  + +ENG+SYT+KP++ ESSAET VF ELVASG++++V+K++IET I S  AA + S   XX      L+ +A+ R E++ +  + +A T L++   AM +AQ +      SATS E +E A   F      A+ +A +  S AA ++EMW R+ +  T+S S EVK+ +    SL  A  ID AVQAE +AA  ++++                       D++ AFE+Y++EV+ ++ENDS F A+ V+AVD EIN++SG K
Sbjct:   89 VDAESYQHIVVVAEKEGQQWAGFLTSNVENGSSYTLKPLNAESSAETAVFTELVASGSADLVSKADIETAIGSEAAAEIRSGXXXXSRIAFGLKTAAQARAEYYADALQNDAETALKSTFEAMAEAQLRFESELESATSEEQQEAALEMFAEAVVEAHTNAGLTISEAATSIEMWSRIAVKGTSSVSDEVKNNIRKNSSLIVAVAIDNAVQAEAQAAEMSETTXXXXXXXXXXXXXXXXXXXXXXXDVKAAFESYHDEVQAAIENDSKFEASVVVAVDSEINASSGFK 376          
BLAST of mRNA_M-pyrifera_M_contig81070.18961.1 vs. uniprot
Match: A0A3F3I9Y6_9BACT (Uncharacterized protein n=5 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A3F3I9Y6_9BACT)

HSP 1 Score: 174 bits (440), Expect = 1.980e-47
Identity = 103/239 (43.10%), Postives = 152/239 (63.60%), Query Frame = 1
Query:    1 FEGAVNADAYQNIIVQAKSETETMMGFAATKIENGNSYTIKPIDTESSAETKVFAELVASGNSEIVNKSEIETVITSTNAATVNSSISXXXXXXXALENSAKVRTEFFKNEFEGEANTKLEAVASAMIDAQTKLXXXXASATSVEAREEAYATFRSDFTSAYLDAEIKASTAAKAVEMWGRVFINSTNSASSEVKSEMNIQVSLATATIIDAAVQAEMEAAGAAQSSRDAAVQAGTTLK 717
            F  + +A   QN +V A++     MGF +T++ENG S  +KPIDTES+AE+ VFA LVA G++++V KS+IE ++TSTN + V +S S       AL +SA+ R +FF NE EG    KL A    + DAQT+L    ++A+S +A  EAY  F     +A++ A ++A+ AA+A+E+WGRV +N+ NSAS+E+K+ +  Q S+     IDAAV+AE EA+  +  S+ A   AG  LK
Sbjct:   82 FSLSFDASTAQNYVVVAENNGAEAMGFLSTQVENGQSIQLKPIDTESTAESNVFARLVAQGDADLVTKSDIEAMVTSTNESEVRNSASLASQFAVALASSAEARADFFANEVEGNGEEKLNATLEILADAQTRLEADLSAASSTQAETEAYDLFLETSANAFVSAGVEANKAAQAIEIWGRVLVNNINSASTEIKNSVRSQTSIMAGIAIDAAVRAEAEASEMSNESKQAIADAGVQLK 320          
BLAST of mRNA_M-pyrifera_M_contig81070.18961.1 vs. uniprot
Match: UPI001F470C01 (hypothetical protein n=1 Tax=Rhodohalobacter sp. 614A TaxID=2908649 RepID=UPI001F470C01)

HSP 1 Score: 171 bits (434), Expect = 1.810e-46
Identity = 110/310 (35.48%), Postives = 186/310 (60.00%), Query Frame = 1
Query:    1 FEGAVNADAYQNIIVQAKSETETMMGFAATKIENGNSYTIKPIDTESSAETKVFAELVASGNSEIVNKSEIETVITSTNAATVNSSISXXXXXXXALENSAKVRTEFFKNEFEGEANTKLEAVASAMIDAQTKLXXXXASATSVEAREEAYATFRSDFTSAYLDAEIKASTAAKAVEMWGRVFINSTNSASSEVKSEMNIQVSLATATIIDAAVQAEMEAAGAAQSSRDAAVQAGTTLKSEINASAGIMADIRTAFENYNEEVKTSLENDSNFSAAAVIAVDGEINSASGAKAIFDNSIATRVSANLVLE 930
            F    + +  + ++V A+S  E + G+ ++++EN NSYTIKP++ ESSAET V+A +   GNS++V+KS+IE+VIT+ ++A +    +       A+ NSA+ R +FF  EF  +A + +++    M DAQ +      S++S +  E A+  F     +AY DA ++A   A+ + + GR  +NS +S SSEVK+E     S   A   D AV+A  E++G AQS+ DA   AG TL+ +++ S G  + +  AFE Y++EV+ ++E+DS+   A ++ +D EIN ASG KA   ++++    A+ +++
Sbjct:   94 FSLEADVETAEEVVVVAESNGEQLKGYISSEVENENSYTIKPLNVESSAETDVYARVKTQGNSDMVHKSDIESVITANSSADIYGDATATNEIATAISNSAQARADFFA-EFGEDAESDIDSYFETMTDAQFEYEAALNSSSSNDQDEAAFEAFLESKVNAYSDAGLEAKENAEFLRVQGRAILNSMSSVSSEVKNEARHTSSFMIAIATDNAVRARAESSGMAQSTVDAIADAGVTLRVDVHGSDGSESSVEAAFETYHDEVRAAMESDSSVEGAIIVTIDTEINVASGVKAALHSALSGVAEASQLID 402          
BLAST of mRNA_M-pyrifera_M_contig81070.18961.1 vs. uniprot
Match: A0A6I7NM77_9BACT (Uncharacterized protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6I7NM77_9BACT)

HSP 1 Score: 166 bits (419), Expect = 3.750e-44
Identity = 109/308 (35.39%), Postives = 181/308 (58.77%), Query Frame = 1
Query:   13 VNADAYQ--NIIVQAKSETETMMGFAATKIENGNSYTIKPIDTESSAETKVFAELVASGNSEIVNKSEIETVITSTNAATVNSSISXXXXXXXALENSAKVRTEFFKNEFEGEANTKLEAVASAMIDAQTKLXXXXASATSVEAREEAYATFRSDFTSAYLDAEIKASTAAKAVEMWGRVFINSTNSASSEVKSEMNIQVSLATATIIDAAVQAEMEAAGAAQSSRDAAVQAGTTLKSEINASAGIMADIRTAFENYNEEVKTSLENDSNFSAAAVIAVDGEINSASGAKAIFDNSIATRVSANLVLE 930
            VN DA Q   +++ A+SE   M GF A +IENG S+T+KP++ ES+AET V+  +++ G S +++KS+IET+I + +AA +++S S       A+ +SA+ R EF       +  T L      M +AQ       +S+TS +AR  A+  +      +Y +A +  +  AK   M   V  N+  S S+ V++      +   A  IDA V+A  EA+G +QS+  A   AG+ LK+E+ +S G  A ++++F+ Y+E+V+T++ENDS+  A+ +IA+D EINS  GAK +F  S++  + A+ +L+
Sbjct:  111 VNVDANQANRVVIVAESEGRQMTGFIAAEIENGKSFTLKPVNIESTAETAVYTRIISEGKSNLIHKSDIETLIRANSAADIHASGSVTNQVAAAIIHSAEARAEFLSEYGSSDVQTLLNNYFELMTEAQLDYEAAVSSSTSSDARNAAFDAYLHKKFDSYHEAGVDLAATAKMTHMQAIVVQNTLGSVSAGVRNTARSSQAFLAAIAIDAVVKARAEASGMSQSTVSAISDAGSVLKAEVRSSNGAEASVKSSFKKYHEDVRTAIENDSSVEASIIIAIDTEINSVGGAKFLFSTSLSGLLDASSLLD 418          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81070.18961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A3D1GCE3_9BACT1.840e-7446.28Uncharacterized protein n=1 Tax=Balneolaceae bacte... [more]
UPI000369D30C4.670e-6942.90hypothetical protein n=1 Tax=Balneola vulgaris Tax... [more]
A0A350PFB4_9BACT1.020e-6145.21Uncharacterized protein (Fragment) n=1 Tax=Balneol... [more]
A0A6A8Q8G0_9BACT4.200e-6039.35Uncharacterized protein n=1 Tax=Balneolaceae bacte... [more]
A0A521AGK6_9BACT5.200e-5740.47Uncharacterized protein n=1 Tax=Gracilimonas mengy... [more]
A0A1B6Y745_9BACT6.620e-5440.78Uncharacterized protein n=1 Tax=Balneola sp. EhC07... [more]
UPI00036E47559.460e-4939.24hypothetical protein n=1 Tax=Gracilimonas tropica ... [more]
A0A3F3I9Y6_9BACT1.980e-4743.10Uncharacterized protein n=5 Tax=Bacteroidetes/Chlo... [more]
UPI001F470C011.810e-4635.48hypothetical protein n=1 Tax=Rhodohalobacter sp. 6... [more]
A0A6I7NM77_9BACT3.750e-4435.39Uncharacterized protein n=1 Tax=Balneolaceae bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81070contigM-pyrifera_M_contig81070:3..932 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size930
Cds size930
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816716.316946-CDS-M-pyrifera_M_contig81070:2..9321622816716.316946-CDS-M-pyrifera_M_contig81070:2..932Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81070 3..932 +
1692278137.014017-CDS-M-pyrifera_M_contig81070:2..9321692278137.014017-CDS-M-pyrifera_M_contig81070:2..932Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81070 3..932 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81070.18961.1prot_M-pyrifera_M_contig81070.18961.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig81070 3..932 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig81070.18961.1

>prot_M-pyrifera_M_contig81070.18961.1 ID=prot_M-pyrifera_M_contig81070.18961.1|Name=mRNA_M-pyrifera_M_contig81070.18961.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=310bp
FEGAVNADAYQNIIVQAKSETETMMGFAATKIENGNSYTIKPIDTESSAE
TKVFAELVASGNSEIVNKSEIETVITSTNAATVNSSISNSANIATALENS
AKVRTEFFKNEFEGEANTKLEAVASAMIDAQTKLETKLASATSVEAREEA
YATFRSDFTSAYLDAEIKASTAAKAVEMWGRVFINSTNSASSEVKSEMNI
QVSLATATIIDAAVQAEMEAAGAAQSSRDAAVQAGTTLKSEINASAGIMA
DIRTAFENYNEEVKTSLENDSNFSAAAVIAVDGEINSASGAKAIFDNSIA
TRVSANLVLE
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mRNA from alignment at M-pyrifera_M_contig81070:3..932+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig81070.18961.1 ID=mRNA_M-pyrifera_M_contig81070.18961.1|Name=mRNA_M-pyrifera_M_contig81070.18961.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=930bp|location=Sequence derived from alignment at M-pyrifera_M_contig81070:3..932+ (Macrocystis pyrifera P11B4 male)
TTTGAAGGTGCCGTTAATGCTGATGCTTATCAAAACATAATTGTTCAAGC TAAGTCGGAAACCGAAACTATGATGGGTTTTGCTGCTACGAAGATTGAAA ATGGTAATTCATATACCATTAAACCAATCGATACAGAATCAAGTGCAGAA ACTAAAGTTTTTGCTGAATTAGTAGCCTCAGGAAACTCTGAAATAGTTAA TAAATCTGAAATTGAGACTGTTATAACCAGCACAAATGCTGCAACGGTCA ATTCAAGTATTTCTAATTCTGCTAACATTGCCACAGCTTTGGAGAACTCA GCTAAAGTGAGAACAGAGTTTTTTAAGAACGAATTTGAAGGCGAAGCCAA TACTAAATTGGAAGCAGTAGCAAGCGCTATGATTGATGCACAGACCAAAT TGGAAACTAAACTTGCTTCCGCAACATCTGTTGAGGCTAGAGAAGAAGCC TATGCAACCTTTAGGTCAGACTTTACAAGCGCGTATTTAGATGCTGAAAT TAAAGCTTCAACAGCGGCTAAGGCTGTAGAAATGTGGGGAAGAGTTTTTA TTAATAGTACTAACTCAGCTTCTTCAGAAGTTAAAAGTGAAATGAACATA CAAGTTTCGCTTGCAACCGCAACTATTATAGATGCAGCAGTTCAAGCAGA AATGGAAGCTGCAGGAGCTGCGCAATCTTCAAGAGATGCAGCAGTGCAAG CTGGTACAACACTAAAGTCAGAGATTAATGCCTCAGCAGGTATAATGGCT GATATTAGAACCGCTTTTGAGAATTATAATGAAGAGGTTAAAACTTCTCT TGAAAATGATTCTAATTTTTCTGCAGCAGCAGTAATTGCTGTAGATGGTG AAATTAATTCAGCATCTGGAGCTAAAGCAATCTTCGATAATTCAATAGCA ACTAGAGTTAGTGCAAACCTTGTTCTAGAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig81070:3..932+

>mRNA_M-pyrifera_M_contig81070.18961.1 ID=mRNA_M-pyrifera_M_contig81070.18961.1|Name=mRNA_M-pyrifera_M_contig81070.18961.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1860bp|location=Sequence derived from alignment at M-pyrifera_M_contig81070:3..932+ (Macrocystis pyrifera P11B4 male)
TTTGAAGGTGCCGTTAATGCTGATGCTTATCAAAACATAATTGTTCAAGC
TAAGTCGGAAACCGAAACTATGATGGGTTTTGCTGCTACGAAGATTGAAA
ATGGTAATTCATATACCATTAAACCAATCGATACAGAATCAAGTGCAGAA
ACTAAAGTTTTTGCTGAATTAGTAGCCTCAGGAAACTCTGAAATAGTTAA
TAAATCTGAAATTGAGACTGTTATAACCAGCACAAATGCTGCAACGGTCA
ATTCAAGTATTTCTAATTCTGCTAACATTGCCACAGCTTTGGAGAACTCA
GCTAAAGTGAGAACAGAGTTTTTTAAGAACGAATTTGAAGGCGAAGCCAA
TACTAAATTGGAAGCAGTAGCAAGCGCTATGATTGATGCACAGACCAAAT
TGGAAACTAAACTTGCTTCCGCAACATCTGTTGAGGCTAGAGAAGAAGCC
TATGCAACCTTTAGGTCAGACTTTACAAGCGCGTATTTAGATGCTGAAAT
TAAAGCTTCAACAGCGGCTAAGGCTGTAGAAATGTGGGGAAGAGTTTTTA
TTAATAGTACTAACTCAGCTTCTTCAGAAGTTAAAAGTGAAATGAACATA
CAAGTTTCGCTTGCAACCGCAACTATTATAGATGCAGCAGTTCAAGCAGA
AATGGAAGCTGCAGGAGCTGCGCAATCTTCAAGAGATGCAGCAGTGCAAG
CTGGTACAACACTAAAGTCAGAGATTAATGCCTCAGCAGGTATAATGGCT
GATATTAGAACCGCTTTTGAGAATTATAATGAAGAGGTTAAAACTTCTCT
TGAAAATGATTCTAATTTTTCTGCAGCAGCAGTAATTGCTGTAGATGGTG
AAATTAATTCAGCATCTGGAGCTAAAGCAATCTTCGATAATTCAATAGCA
ACTAGAGTTAGTGCAAACCTTGTTCTAGAATTTGAAGGTGCCGTTAATGC
TGATGCTTATCAAAACATAATTGTTCAAGCTAAGTCGGAAACCGAAACTA
TGATGGGTTTTGCTGCTACGAAGATTGAAAATGGTAATTCATATACCATT
AAACCAATCGATACAGAATCAAGTGCAGAAACTAAAGTTTTTGCTGAATT
AGTAGCCTCAGGAAACTCTGAAATAGTTAATAAATCTGAAATTGAGACTG
TTATAACCAGCACAAATGCTGCAACGGTCAATTCAAGTATTTCTAATTCT
GCTAACATTGCCACAGCTTTGGAGAACTCAGCTAAAGTGAGAACAGAGTT
TTTTAAGAACGAATTTGAAGGCGAAGCCAATACTAAATTGGAAGCAGTAG
CAAGCGCTATGATTGATGCACAGACCAAATTGGAAACTAAACTTGCTTCC
GCAACATCTGTTGAGGCTAGAGAAGAAGCCTATGCAACCTTTAGGTCAGA
CTTTACAAGCGCGTATTTAGATGCTGAAATTAAAGCTTCAACAGCGGCTA
AGGCTGTAGAAATGTGGGGAAGAGTTTTTATTAATAGTACTAACTCAGCT
TCTTCAGAAGTTAAAAGTGAAATGAACATACAAGTTTCGCTTGCAACCGC
AACTATTATAGATGCAGCAGTTCAAGCAGAAATGGAAGCTGCAGGAGCTG
CGCAATCTTCAAGAGATGCAGCAGTGCAAGCTGGTACAACACTAAAGTCA
GAGATTAATGCCTCAGCAGGTATAATGGCTGATATTAGAACCGCTTTTGA
GAATTATAATGAAGAGGTTAAAACTTCTCTTGAAAATGATTCTAATTTTT
CTGCAGCAGCAGTAATTGCTGTAGATGGTGAAATTAATTCAGCATCTGGA
GCTAAAGCAATCTTCGATAATTCAATAGCAACTAGAGTTAGTGCAAACCT
TGTTCTAGAA
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