|
Homology
BLAST of mRNA_M-pyrifera_M_contig8106.18960.1 vs. uniprot
Match: A0A6H5JCK4_9PHAE (Telo_bind domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK4_9PHAE) HSP 1 Score: 444 bits (1142), Expect = 1.310e-136 Identity = 317/684 (46.35%), Postives = 378/684 (55.26%), Query Frame = 2
Query: 1154 VQEYRGRPQLVGSHSVSWLVIRKKKIMREAFQKGLPID--SGGRGGXXXSVGDDDADPFEDSSPSGPDAGGGQTDSVLSAAVWEVQASSNTYTMSQVDHDRCNALDAWFKTNAPRLWLKQSSEPKIWVQDIFRRPPEGRVATETEVDLICCLASKHEDSGGGSGSLLNVYVADGTGFATSRTPTMALNRRDAALQKGMRAALGKPDWSPGNPHPHPFPAYLKVDVMENKKEWESLKLSQGMWIRLRRLTITKNRNTSFMSAKMKESTSSVNPLHPSMAEVQTIAISHEHSCANANRNA-------------------------------------GTPTPPLGGAGNETAQ-DVPRANGDIPG------------PAXXXXXXXXXXXXXASARKTIADVGRPDSGGAQASKLDGGVVSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGVV--SGCAASGGGEGS---GEASRRGTKRALPAAGVE-----GAEKRSVAPASCGPLSNLGAVRRKAAPEAFDARVRITAHFPSNVEDFVRQGP-GPGDGPRFLFMLRLEDDDGIVDAVAAGSDASHLLPGSPSPEQFHRSEEVRGRVQRALERLEAEGSGMWG-----LRLRSYLTPM-----EGDQAYCKRYSIVSPSSLAE 2986
VQEYRGRPQL+ + +WLVIRKKK MRE +QK PI S G XXX S PSGPDAGGG+ D++L A WEVQ+SS YT+SQVD DRC AL W +P+LWLK SSE K+WVQDIFRRP G V ++ EVDL+CCL SKHE + GG+GSL VYVADGTGFA+S +RRDAAL KG+RAALGKP WSPGNP P P PA+LKV+V ENK+EWE+L LS GMWIRLRRLTI KNR T MSAKM + SSVNPLHPSM EVQ IA+S+ CA+A+ ++ P P AG + Q PR NG G XXXXXX +SA + G + G A +S G + XXXXXX ++ V+ S GGEG+ G S RGTKRALP + GAE+R AP +SNL VR AP FD R RI +H+P VEDFVR+GP D FLF LRLEDD G+VDA+A+G DAS LLPGSPSP +F+ S EV+ RV+R L RLE+ +G G LRLRSYL P+ GD+ CKRYSI++PS L +
Sbjct: 294 VQEYRGRPQLLAAGGAAWLVIRKKKAMRETYQK-CPIGGISSASGXXXXXXXXXXXXXXXXSPPSGPDAGGGEVDAILPATDWEVQSSSANYTLSQVDQDRCIALSDWLARKSPQLWLKSSSEVKVWVQDIFRRPQSGDVISKLEVDLVCCLTSKHEKAEGGAGSLSEVYVADGTGFASSMPGKEWDDRRDAALLKGVRAALGKPGWSPGNPRPPPIPAHLKVEVTENKREWEALALSPGMWIRLRRLTIVKNRATGNMSAKMIDKGSSVNPLHPSMVEVQHIAMSYATHCASASSSSXXXXXXXXXXXXXXXXXXXXXXXXXXKAPSPVRPPSRSAPAPATATAGVCSRQMPSPRGNGASSGNXXXXXXXXXXXXXXXXXXXGDPGVSASSAAASGPSSGCDNRGRATSSSRVTGCERRSLPSSPTAAXXXXXXPRKVPTSSAQQLAPLLRRQQQGPPLRPAGVRGRCHFFDRGDASKDVLGTSNARTGVGGEGAEVGGHVSVRGTKRALPVSEDRTETRAGAERRPEAPEGRR-MSNLEVVRSTVAPNVFDTRARIVSHWPPKVEDFVRRGPESDNDRLHFLFTLRLEDDYGVVDAIASGPDASLLLPGSPSPTEFYTSLEVQSRVERVLTRLESTSAGKAGGGLIELRLRSYLAPLVEIRHRGDK--CKRYSIIAPSCLED 973
BLAST of mRNA_M-pyrifera_M_contig8106.18960.1 vs. uniprot
Match: D7FIQ5_ECTSI (POT1 protection of telomeres 1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ5_ECTSI) HSP 1 Score: 268 bits (684), Expect = 2.980e-74 Identity = 142/238 (59.66%), Postives = 164/238 (68.91%), Query Frame = 2
Query: 1154 VQEYRGRPQLVGSHSVSWLVIRKKKIMREAFQKGLPIDSGGRGGXXXSVGDDDADPFED-------SSPSGPDAGGGQTDSVLSAAVWEVQASSNTYTMSQVDHDRCNALDAWFKTNAPRLWLKQSSEPKIWVQDIFRRPPEGRVATETEVDLICCLASKHEDSGGGSGSLLNVYVADGTGFATSRTPTMALNRRDAALQKGMRAALGKPDWSPGNPHPHPFPAYLKVDVMENKKEWE 1846
VQEYRGRPQL+ + +WLVIRKKK MRE +QK PI GG + GD S PSGPDAGGG+ D+VL A WEVQ+SS YT+SQVD DRC AL W T +P LWLK SSE K+WVQDIFRRP G V ++ EVDL+CCL SKHE + GG+GSL VYVADGTGFA+S +RRDAAL KG+R ALGKP WSPGNP P P PA+LKV+V ENK+E E
Sbjct: 309 VQEYRGRPQLLAAGGAAWLVIRKKKAMRETYQK-CPI-----GGISPASGDXXXXXXXXXXXXXXXSPPSGPDAGGGEADAVLPATDWEVQSSSANYTLSQVDQDRCIALSDWLATKSPHLWLKSSSEVKVWVQDIFRRPQSGDVISKLEVDLVCCLTSKHEKAEGGAGSLSEVYVADGTGFASSMPGKEWDDRRDAALLKGVRTALGKPGWSPGNPRPPPIPAHLKVEVTENKREVE 540
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 230.3 |
Seed ortholog evalue | 2.3e-57 |
Seed eggNOG ortholog | 2880.D7FIQ5 |
Preferred name | POT1 |
KEGG ko | ko:K10406,ko:K11109,ko:K22128 |
KEGG TC | 1.A.75.1 |
KEGG Module | M00424 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000217,GO:0000228,GO:0000723,GO:0000781,GO:0000782,GO:0000783,GO:0000784,GO:0000785,GO:0000790,GO:0000792,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003697,GO:0003723,GO:0004857,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005720,GO:0005724,GO:0006139,GO:0006259,GO:0006278,GO:0006725,GO:0006807,GO:0006996,GO:0007004,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010521,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010638,GO:0010639,GO:0010833,GO:0016043,GO:0016233,GO:0017151,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0022607,GO:0030234,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031933,GO:0031974,GO:0031981,GO:0032200,GO:0032202,GO:0032204,GO:0032205,GO:0032206,GO:0032210,GO:0032211,GO:0032212,GO:0032356,GO:0032357,GO:0032392,GO:0032508,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033365,GO:0034502,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0042162,GO:0042592,GO:0043047,GO:0043085,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045184,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051052,GO:0051053,GO:0051054,GO:0051095,GO:0051096,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051276,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051348,GO:0051641,GO:0051972,GO:0051973,GO:0051974,GO:0060249,GO:0060255,GO:0060382,GO:0060383,GO:0061820,GO:0061821,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070187,GO:0070198,GO:0070199,GO:0070200,GO:0070727,GO:0071103,GO:0071704,GO:0071840,GO:0071897,GO:0072594,GO:0080090,GO:0090304,GO:0090657,GO:0097159,GO:0098505,GO:0098687,GO:0098772,GO:0098847,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1904356,GO:1904357,GO:1904358,GO:1905462,GO:1905464,GO:1905773,GO:1905774,GO:1905776,GO:1990955,GO:2000112,GO:2000113,GO:2000278,GO:2000279,GO:2000573,GO:2001251,GO:2001252 |
EggNOG free text desc. | positive regulation of DNA strand elongation |
EggNOG OGs | KOG4757@1,KOG4757@2759 |
Ec32 ortholog description | POT1 protection of telomeres 1 homolog |
Ec32 ortholog | Ec-27_000660.1 |
COG Functional cat. | S |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00002,ko02000,ko03032,ko04131,ko04812 |
Exons | 7 |
Model size | 2986 |
Cds size | 1755 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816716.1920238-UTR-M-pyrifera_M_contig8106:111..438 | 1622816716.1920238-UTR-M-pyrifera_M_contig8106:111..438 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig8106 112..438 + |
1692278136.9283407-UTR-M-pyrifera_M_contig8106:111..438 | 1692278136.9283407-UTR-M-pyrifera_M_contig8106:111..438 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig8106 112..438 + |
1622816716.205294-UTR-M-pyrifera_M_contig8106:498..574 | 1622816716.205294-UTR-M-pyrifera_M_contig8106:498..574 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig8106 499..574 + |
1692278136.9436007-UTR-M-pyrifera_M_contig8106:498..574 | 1692278136.9436007-UTR-M-pyrifera_M_contig8106:498..574 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig8106 499..574 + |
1622816716.2194452-UTR-M-pyrifera_M_contig8106:1668..2496 | 1622816716.2194452-UTR-M-pyrifera_M_contig8106:1668..2496 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig8106 1669..2496 + |
1692278136.954691-UTR-M-pyrifera_M_contig8106:1668..2496 | 1692278136.954691-UTR-M-pyrifera_M_contig8106:1668..2496 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig8106 1669..2496 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816716.2318132-CDS-M-pyrifera_M_contig8106:2496..2714 | 1622816716.2318132-CDS-M-pyrifera_M_contig8106:2496..2714 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8106 2497..2714 + |
1692278136.9652786-CDS-M-pyrifera_M_contig8106:2496..2714 | 1692278136.9652786-CDS-M-pyrifera_M_contig8106:2496..2714 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8106 2497..2714 + |
1622816716.242551-CDS-M-pyrifera_M_contig8106:3942..4075 | 1622816716.242551-CDS-M-pyrifera_M_contig8106:3942..4075 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8106 3943..4075 + |
1692278136.9749823-CDS-M-pyrifera_M_contig8106:3942..4075 | 1692278136.9749823-CDS-M-pyrifera_M_contig8106:3942..4075 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8106 3943..4075 + |
1622816716.2532277-CDS-M-pyrifera_M_contig8106:5648..5906 | 1622816716.2532277-CDS-M-pyrifera_M_contig8106:5648..5906 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8106 5649..5906 + |
1692278136.984525-CDS-M-pyrifera_M_contig8106:5648..5906 | 1692278136.984525-CDS-M-pyrifera_M_contig8106:5648..5906 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8106 5649..5906 + |
1622816716.265596-CDS-M-pyrifera_M_contig8106:6674..7496 | 1622816716.265596-CDS-M-pyrifera_M_contig8106:6674..7496 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8106 6675..7496 + |
1692278136.9940906-CDS-M-pyrifera_M_contig8106:6674..7496 | 1692278136.9940906-CDS-M-pyrifera_M_contig8106:6674..7496 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8106 6675..7496 + |
1622816716.27752-CDS-M-pyrifera_M_contig8106:9867..10191 | 1622816716.27752-CDS-M-pyrifera_M_contig8106:9867..10191 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8106 9868..10191 + |
1692278137.0040658-CDS-M-pyrifera_M_contig8106:9867..10191 | 1692278137.0040658-CDS-M-pyrifera_M_contig8106:9867..10191 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8106 9868..10191 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8106.18960.1 >prot_M-pyrifera_M_contig8106.18960.1 ID=prot_M-pyrifera_M_contig8106.18960.1|Name=mRNA_M-pyrifera_M_contig8106.18960.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=585bp
MREAFQKGLPIDSGGRGGGGGSVGDDDADPFEDSSPSGPDAGGGQTDSVL SAAVWEVQASSNTYTMSQVDHDRCNALDAWFKTNAPRLWLKQSSEPKIWV QDIFRRPPEGRVATETEVDLICCLASKHEDSGGGSGSLLNVYVADGTGFA TSRTPTMALNRRDAALQKGMRAALGKPDWSPGNPHPHPFPAYLKVDVMEN KKEWESLKLSQGMWIRLRRLTITKNRNTSFMSAKMKESTSSVNPLHPSMA EVQTIAISHEHSCANANRNAGTPTPPLGGAGNETAQDVPRANGDIPGPAP GPTPDPASGPASASARKTIADVGRPDSGGAQASKLDGGVVSSAPPERGRR EDSSRPQVEGGTSQKEQTTHPPDSPATSQPERREAGGGGSAFGGTAVAAA RGVVSGCAASGGGEGSGEASRRGTKRALPAAGVEGAEKRSVAPASCGPLS NLGAVRRKAAPEAFDARVRITAHFPSNVEDFVRQGPGPGDGPRFLFMLRL EDDDGIVDAVAAGSDASHLLPGSPSPEQFHRSEEVRGRVQRALERLEAEG SGMWGLRLRSYLTPMEGDQAYCKRYSIVSPSSLAE back to topmRNA from alignment at M-pyrifera_M_contig8106:112..10191+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig8106.18960.1 ID=mRNA_M-pyrifera_M_contig8106.18960.1|Name=mRNA_M-pyrifera_M_contig8106.18960.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10080bp|location=Sequence derived from alignment at M-pyrifera_M_contig8106:112..10191+ (Macrocystis pyrifera P11B4 male) CAGGTGTTCCAGGTGACCTTGCGAGACCTCAGCGTGAACAGCGGTGGGCT
CCACCGCATCAACGTCTACTTCTACGACAAGTGGGCCGACGACTACTCCG
GCGTCAGCCTAGGGGACGAACTCACCGTGTCGGGCCCCGCCGCGAGGCTC
GTGCGCCCCGATCCCTCAGCTGATGCCGGAGACCACCCCTTCTGCCTCAT
CTTTTACGCGGAGAGTGGCGAAGGCGAAGGCAGTGACGCGATGCTGCCGC
CGTCGAGGGCATCCGCGGCGAGACCTGCCGGGAGGTCGTGCGCCGACGAG
GCGGGTGACGGTGTGGCCTGCAGGGTTGTGACCCCCGCGGGGAGAGTGGC
CAGGGACGAGCCGACAGCCAGACGGGGGCGGGGGCAGGTGCAAGGTGCGT
CGGAGAGCGACCGCGGTCGAGAGGGGGGCAGCGGGAGGGGCGGGACGTCC
GGAGGCGCAAAAGGTGAAGTGTTTAGCCAGGCACGAGGCTCACTAATACG
GTAGGTAGATTTCGTAGCACTGCTACCTGCTGTAGGTAGGTTTAGCTGCA
ATGCAGCTTTAATAGGAAGGGCGGTGTGGGTGACGTCGTTTCGTCTGCGT
GCCCATCGGCTGGTGTGGTTCTACTTGCAGCAGTAGTCTGCTTATTTTGT
CCTGATGGTCCTGATGCCTTTGCTCTATCCGCTGCTTTTGCGGAGCCGTC
TCTTGTCAACTTTTTTTTTTATGATTTCCCGCGTTGCGGGGACCTTTCTT
TTTGCGTGTACTACTGCTGTATTTCGTAGGGCTGGGCGTGTCGGCCAGTA
GTTATGTACTGATTAACCTGGCCTGTATATTCGCCAGTAGTTTTTATCGT
ATGTACTCCCAAGTAACACGCCATATTGTTGTACGGAAATCCACCAATTG
CCACTAGCCTTGTGGGCAGGACCGGTCGGCACAAAACTTTGTGCCGGATG
CGGGTCTTGTTGGTCAAGGCTGGCCTTTCGGCCGCCCAGTGCTTTTTGGA
AAAACGCCACCAAAACACGCGGCGGAGCCGCGAGACTGCCCCTACCGACC
TCGAGGACCCCAAACGGTCAGGGTTAGGGTTAGGGATAGACCTGGGATCC
GGTTGGTCTGGGCCGACGTGCAAGGGTGAATTTGACGACACACGTCCTAC
CCACAAAGTTATGTGCCGACCAGTCCTGCACATAGGCGGATTCCACCAAT
TGCGGTTCCGGAGAAGAGGGACAGTATATTGCTGCAATCCAGCATACTGA
TTGATTTCGACGACAGTATCATCCCTACTGACTTGAGTCATCCAGTGCCC
AGCCCTATTAATTGTATTTCGCGTCTGTCTACAGCAGTACGTACCCTGTT
TCCGTACGGGTATGATTATTTTCTAGGCCGATCGCGCATCTGCTCCCTCG
ACGCTAACCCCACTCGAAATAATATATTTGGCATACGAGGTACGGTATAG
GTCAAGTCTAGTACTGCTGTTTCATTTTTTTTATTGCTGCTCCATTTTTT
CTGGCCTTTCGCAGTAACCTGGGGAATCGTATGGTACGTGCTGTCGTTGC
TGTGCAGGGGAATATACGTACACAAACTTGGCCAGGCTCCGGGCACCGGA
AGCTAAAGTTAACGTCTACGGTGTCGTGTGCTCCTTCAGCCACCGCCACC
AATCCAGGGGCAGAGACGCGACTACCTCGGTGAGCCTGCTGGACGAGACT
TGCACCCAGTCCGACAACGCCGTGCCGTGCAACTTCTTCAGTCCGTCCTG
GAGCAAGCTGCCAGCACCCGCGATGGTGGGGGATATCGTCAGGATTCACC
GGGCTAAGGCAAGCGATTAATGTACCTGTTGTCTTGTGGGCAAGCGACGA
GTGTACCTGTTGTTTTTTGGGCAAGCGACGAATGTGCCTGTGCAAACTTG
AAAAAAAAGTCGATGTTGCTGGGTTTTGCTGTGCTCATTCAAAACCCACA
CCCACCCACCCAAGGCACCCCCTTTGGTGCCAAAACATATTTTAATTTAG
CGGAAGGATATTCAACGCAAGGCAGTCGTACTGCACGCCCCGTGTATTTT
AACGGACAAACCCTGCTGATGTGAAATCAACTCCTGTTGCCAACTCAAAA
ACATGTCGTGCAGAGTTCACGAAAAATGGCGTGGACGAGTTTCAAACAGC
AACCCCTGCCTCTGAACGGCCCCAGTTGTATCATACGTGTACCTGTGCCT
TGACCACCTCCGCCTCTCTCCCTCCCTCCCTCCCTGTCCCGCCAACATAA
AACAACCACAATGTTACAAAAAACAAACCGGACCGGGAACTGAAAAAACA
AAAGTAGGTGCAAGAGTACAGGGGGCGACCCCAGCTGGTCGGCAGCCACA
GCGTTTCCTGGCTAGTCATCCGCAAGAAGAAGATTATGCGAGAGGCTTTC
CAGAAGGGCCTTCCGATCGACAGCGGCGGTAGAGGCGGCGGCGGCGGCAG
CGTTGGCGACGATGATGCTGACCCCTTTGAGGACTCGTCTCCTTCGGGTC
CTGACGCGGGGGGCGGCCAAACTGATTCGGTGCTGTCGGCGGCGGTGTGG
GAGGTGCAGGCGTCTTCGAACACCTACACGATGTCGCAAGTGGACCATGA
TAGGTGCGTCTGTTTGTCCTATGTGCGTGTGGGTCGGGGGAGGGGGGGGC
AGCGTCGAACTCTGGGAGTGTCTGGCCTCGCACAGTATATCCGTGCAAAC
TCCGCGCGTATATAGGCAGCCTGTATATATCGCATAACGGATTGCCGAGT
TCAGAGGGCTTAATGTATTGACTATTGCATAACGCAAAATAGTGTTGTCG
ACTACTGTAGTCAGGGTGCTCAGAAGAGAGGTCGTTGATGTGTTTACGGG
TGTTCGACGCTGAGGAAGGCATGTGTTGCGCGAGAGAGCTCGACAACGGT
GCTGCTCTGATTCACGTTGCTCCACTAGCTTTGTGTACGTGTCGGGTTTT
CCCACCCCTCTTCATCCTTTCCTCCACCATTTGTATAGCTGCTTTGCTGT
ATATCGGTAGGCTTGTTTTCCGTTGCGTCGTCTTCGGTGCTTATTGCGCC
AGGAAAATCTCTAAACCAGGGTTGTAGCGACTACGACGCTCTCCTGTCGC
TTCGCGGGGACACTTTTGCCACCGCCGGACAGCTGACTTCCCCCCCTTTT
TAACCAAGCTCTCCTTGGCCGTCTTGCGGTGTTTGAGGGGATGTACGTGC
GCATGTCATGCATGGCCGTAGTCGTACTTTTGACCATAGACCCTGGCATC
CCTACAATGCCGGGAGGTGGCTTCAATTGTTCTGCACTCTCTATACGGAA
AAAAATTAATCCAACCACCTGCTTGCTGTGTGCCGCTGTCGAACCGGGCA
TGCTCCAGCTACCGCTTGGCCTGACGCTCTCTGGTGGCGGCTGCTTGAAA
GTGCACCCTAAGTTGTGGTCAGTTTTCAATTCAAGCCAGAGAAGCCGGTT
GGCGGCTCTCTTGCCCCTTGACGAACAGCCGTCAAAGAAAGCCGTCAAGG
ACTCCTTACACTTGAACTAGCATACAGAAGGCCGTCAAAGAAAGCCGCGA
AGGACTCTATTCACTTCAATTAGCATACAGACAGCCGTCAAAGACAGCCG
TCAAAGGTTCCTCACACTTAGATCAGCGTACGGACAGCCCTCAAGGACTC
CCCACCCTTAAGCGAGCGAGGATATTCAGTCAGAAGAGGCCTTGACGGGT
CAAACCTGTGGAGGCCGTCAACCGACATATTCATATGCACCAGTATATGT
TTGGTTCGAGCTGCATACCAGGTATATGGCTCAAAACCCTAAAATCGCTT
TTTGCTGCCGCTCTAACGCCTGCCGGAAAAGGTGCAACGCCTTGGACGCG
TGGTTCAAAACCAACGCCCCGCGCCTCTGGCTGAAGCAGTCTTCGGAGCC
CAAGATATGGGTGCAGGACATTTTCCGACGACCGCCAGAAGGAAGGGTGG
CCACGGAAACAGAAGTGAGTGCATGTGCGAATACTAAAAATTGGCAGCGC
GTCGCACTTGTTCAGGCAGATTTACCCTCTTTAGAATCTGCGACCGACGG
TTTTTGGGGACAAGCTACTTGGAATTCGTGTTTGGGATAAATTTAACTTT
GTAGTTGAAAGGGCTGGGGCCTGACCTGTAGGCGTTTTGCCGGTACATAT
TTATAATATGCAAGTGGGGCTTCGCCGCGGGGCTTCGCCGCGATGGGCTG
ACGCTCGCCTGCGACTTCGCCCATGCCCGTATTGGCGAAGAGGGGACCTC
GTATAACAATACGTGAACCGAAGTAGCACAACAATAGCAACAATAGCAAC
AACTACCGTACTACCAAGGGGTGTGCAGTAAAGTACGCTCGTTCGTAGTA
TACAAGATGGACGGTAAGTACTGCTGTTGTATGGAGAACACCTCGGGTTG
CAGGTTGTTTGTTGTTGTTGTTGTTTTCTTCACATTAAACCGTTCTTTCT
ACGCGTCGACGTCCAGCACAACCAACCAGTGTCCATGCCGATTCTTCAAA
CCTAGAGAGATACAAATTATGTGGTCACAAAGCTACGCCACAGAGAGACT
ACGATGCCACGAAAGTAATGCAATNNNNNNNNNNAAAAGAAACAAACAAA
AGAAACTAAAATATACCTGGTATATGTATATACTTCAGTATAGCAACAAA
CCATCGTACAGGTGTACAACGACGGACGGCAGCTGCAAGCAGCAGCAGCA
GCAGTCACAACAGCTGTATAGATACGCACACGGCCAGAAGCAGAAGCAGC
AACACGCTGTATACTTGCTGCTGTACATTCATATGCGTACGTACATACCT
GGTACTGGTACGTACGTATGTATAGTACGTAAATAGGCAAACGCGTAAAA
TCCCGCTGCTGGTGCTATATTCGTATGGTATGTACAAGTATAAACAGCAA
CAACAAACGTTGTCAGTATCATATCGTATCATATATATCATATCGTATCA
TATCATACGTCGTACGTACCAACCACAGATCATGCGTGTACTCGTACTGC
TGCAGCTGTAGCACTGCTGGTATTATTCTGGGGGGGAGAGTTAACAGCAA
GCAGCAACTGCTGAAACCCCAGCGACCAAACAGCCGACCTCCGAAGGGAT
ATTTTATTATTATTGTTCGTGATCCATATCCTGAAACGCCCACGAACACA
AAATCTGAAGTATTGAAAAAAAACGACGAAAAAAACATTTTCACGAGACT
GTCATAAAACTATTCCGCCGAGACTACGAGACTCTTGTGGACAGAACGCC
TCGGCGCCAGGACAGCACGAGGCCAGCACGGCAAAGGCCACATTCAGCAG
AGTAGGCAGAGTAGGGGTCGGGGAGCAAGATGAGGAAGTAGCGGACCGAG
AGGTGGACCTCATCGCCAGGACGGGCGAAAAAATAGCTCGGAACTATGGG
TAAGAAATGCCGAGGGGCGCTCACAGAACAGCACCCTGGACATATACATG
TATTTATACTGCGCTTGTGTGTAGCATAGTGTGTGCATGTTTTCTTGGTT
TGCTTGCTCAGCAATGTCCGGCTCCCACAACCCGCAGGTTGACCTGATTT
GCTGCTTGGCATCCAAGCACGAGGATTCTGGAGGCGGGTCCGGCTCCCTG
TTGAACGTGTACGTGGCCGACGGCACAGGGTTTGCAACCTCGAGGACGCC
GACCATGGCTCTGAATAGACGCGACGCCGCGCTGCAGAAGGGGATGCGCG
CGGCGTTGGGCAAGCCTGATTGGTCTCCCGGAAACCCGCACCCGCATCCC
TTTCCGGCTTACCTTAAGGTCGATGTCATGGAAAACAAGAAGGAGGTGGG
TCTGAGTTTTGCGCGTGTGGCGGTAGTGAAGACGGGGGCGGGGGTGCGCA
GTGGCGACGGCGGCGCGGTAGGGTAAAAGGTGTAGTCGGTATAGTCGGTG
GATTTTAAAACGGTCCGCATTTCGCTGTAATTGTGGTTGTTGTCTCGTTG
TTCTTGTAGTTGGTGTTGCAGGGTGACGCAGTAGGTGTAATTGACAAGGT
GGGAATATCGTTGTTCTTGTTTTTTGTGGTGGTGGTGGTGGTGGTGGTGG
TGTTGTTGTTGTCTTGGCATCCAACCGCTTTTTCTGTATGTGGTACCCAA
CGACGGCCAGCACCCTCCGGGTCCGACCTGATTTATCTTTCCAGAGAGAC
ATGCACAACTTACGCCACAAAGTACAGAGACCGGAATCAGATTCTTCGTA
TACAGTCGTGTATATATATACATACAACGCAGGTGTGAAGGGAGTGGGTA
AATGTTCGTATTCGCGGGAAATATTTTCTATTCAGGTACGTAAAGATTAT
CATGTTGATATACGAGGTTTTGGCGCAATGTGGCTATTCTTTTAAACCCG
GTAGTGCAGACGATACTCCTACCATTTACGTCGACCACCAGCTTGGAGGT
TTTTTTGTTTTCCTCAACCTACTTCAGTCCGACCACATCGCTTGTCGCTG
TCGCCGCCCTCTTCGGGTGCTGCCGAGACTCTGAAAGACTCAGTGCGTGT
GCCTGTGTCCGCAAAATATCCCCTTGTCGTTTTTTCGTTGCACCATCGAC
GGCTTGTTAACAGTGGGAGTCGCTGAAGCTGTCACAGGGCATGTGGATCC
GCCTGAGGCGGCTGACCATCACGAAGAACAGGAACACCTCTTTCATGTCG
GCGAAGATGAAGGAGAGCACCTCGAGCGTCAATCCTTTGCACCCAAGCAT
GGCGGAGGTGCAGACGATTGCCATCTCCCACGAGCACAGCTGCGCGAACG
CCAACCGAAACGCCGGCACCCCAACCCCTCCTCTCGGGGGCGCGGGCAAC
GAGACCGCACAAGATGTCCCTCGTGCTAACGGCGACATACCCGGCCCCGC
TCCTGGCCCCACCCCTGACCCCGCCTCCGGGCCCGCCTCAGCCTCCGCCC
GGAAGACCATCGCAGATGTCGGCAGGCCGGATAGCGGGGGGGCTCAAGCC
TCGAAACTCGACGGGGGCGTTGTCTCAAGCGCCCCACCAGAGAGGGGCCG
GCGGGAGGATTCTTCTAGGCCTCAAGTCGAGGGAGGCACGTCGCAGAAGG
AACAGACCACCCACCCGCCGGATTCCCCCGCGACGTCCCAGCCCGAACGG
AGGGAGGCGGGGGGGGGAGGGAGTGCTTTCGGTGGTACCGCCGTAGCTGC
TGCCAGGGGCGTTGTTAGTGGTTGCGCGGCTAGTGGGGGTGGGGAGGGGT
CGGGAGAGGCGTCTCGGCGAGGCACGAAGCGGGCTTTGCCGGCGGCGGGT
GTGGAGGGGGCGGAGAAGAGATCCGTAGCACCGGCCAGCTGTGGACCGTT
GTCGAACCTGGGGGCGGTGAGGCGCAAGGCCGCCCCGGAGGCGTTCGACG
CAAGGGTTAGGATCACCGCTCACTTCCCTTCGAATGTGAGAGACAGGTTG
CGGGGGACACCTCGCGTAACTGGTGCTGTCGACTTGTTTCACTGGTACCT
ACTACTGTTCACAGATTCGTACGTGGATTTTCTTCGGCAGGACAATTGCC
AGACCCAATGGCGAAGTTATTACGGGGGGCTATAGTAAATAGGACCTACG
GTACGCACAGAAACCTATATATTTCCTATTTTTACTAACATTATTTGGTC
CTATTTACTATGGTCCCCCGTAATAGGTGTTTCTATGAATGCGTGTTTGC
CTTGTTGGGGTGGCAGCTAGTTTTGCCTTCTGAGGGTCCTCGCTTGAGGA
GCTCCATACTATTAGCAAGTCATTAGTAGGTCACCCAAAATCCGGCTTTG
GATCAAATGGTTTTTGCTTGGGCGTTACGAACAACCCAAGGGTGTAGTGA
CGGCTGACGAGTGTAAAACACTGCTGCTGCTGGGATGCCGACAACATTGG
GTGGTTAGTGAACCCTTTTGCAGTTGTACCGCACTGCACATGAACATGTT
TTATTGTTCTAATTCCAAGCAATTTGTCCCCCGAGACGGAGGTGCAGTCC
TAAAGAGGACCCCGGGAGCCAGAAATACGCTACCACACACAGGGCACCCG
ATGAGGTGTGGTTTGGACCATGACGATCGCCTCCGCGAGGGCTTCGACCT
GATGCATGCGGCATGGGCGTAGCCGTTTCGAAAGAAATTTATCCGTAGGT
GACCATAGAGTGACCCTCATGCGGACAGACAGACAGACACTTTTTCTGAA
TCCGTTTGAGAAACCGCAAGTGTAGCACTTGTGGAATAGCCAAAACGTGC
TCATAATTCTACCCCTTCCGCAGCATGCGACTACGTGGGTGTCTGTGCGT
GTTCGTCGGTGTGTTGTGTCCCGTGTGCCCGAAGCTTAACCCGCTAGGGG
GCTTGAGAGGAAACAAGCGGCAAAAACGAAAAAATGACGACTACAGACAG
CGTCCGACGACGAAACAAAGAAACGATTACAGACAACATCCGACCAAAGT
TAAAGGACGATTGCAGCGTCGGCCGACACACGCCGAACCAGCCCCGGGCT
GCTGCTGCTGGCTGCCGGAATAGTCTAGGGGATACACAACATGCACAACA
GTGGTATCGTTTGGAGACCACCCTTTGACGAGCCCAAAAACGTGGTAATA
AATATATACCTGGTACCAGGTATATATATTACTACTGCAGAAAAGATTCC
ATGTGTACTACGTGATAGTTTTTCGCGCCACGAACCTATATACCGAGTCT
GATCTCTACTACAGTACGCCCATACACCGGATGGCTTTAGAATCGGTCCA
CCACTGCAGTGTACAAACTTGAGCTATATATTAGGCGCGTGCACTGCATG
ACACTGCTGCTGTGTACTCGACCTGCTATATGTTCATTGCGTGCTCACAC
CGTTACTACTGTAGATGGTTGGTAATATCGTTCTTCTCCCACCTTTTTCG
GTCGCATTTTTTTCCTGGGTCCCCAAATGACTACTTAAGATTGACTCTTT
TTCACTCTGCAAAAACATACCCAGCTCTGCTTCCAAGTTTCCCCCCCCCC
AAAAAACAAAAAAAAATGGCGGTGCAGGTGTAACAAGGGTTGAACGTTCG
ACTATAAATATCACACCGCAATAATGTTTCTGTTGTATTCCCATGTGCAT
ACAGTATGCGTTCCCCAAAACGTGGGGTGCGTGCAGGTCTGAAAAGTGTC
CACCGCCCCCGAAGAAAATGACGTGCAGGGCGTGGAGCTCGCGCAGCGTT
GCGTTCGTTTTTCAGCACTCGCTTTTTTTCGGGAACGGGAAGAGGTTGCC
AATACCGAACAACGAAAAGGGTGTTTTCGGAAATATCTGGTCGAGAGAGA
GCGAGAGAGTATTCCGAGAATATGACGTACCTGGTACGACTTTAGCACCC
TTGCCGTTGTTGAGGGAAAACGAGCGCTGAAAAGCGATCGCGCCCCTCAG
GCGTTCTACGATAGAGCTTCACCCTATTTTTTTTAAGAGGCTTTCCTCAT
GTCCCCTCAAGGTATAATAAGGCGGAATTCAACGGGGGATAAACATGCGA
ATACGATTGATGCCACACGCATCTCGTACGTGTGCACGCACATACGCGTC
ACGCCGAACAATGAAGAAAGCACGAGTTACATACTCTTATGCGGCCGGGG
TCTATCGAGGTCTGAAACATGCGTCGATCGGTAAGGATGCCGTCGTGACT
CAGATTTGTTTCCCCCCAAATGTGGCACCTGGTAGCTCTATCGCAGAACG
CCTCCCCGCTGTGCGAAGTCAACGCTCTTTCCGGTATGCGCAAACACCGC
CCGAACCCACCCCTCTGAACCCTCTCCCACTCCCGCATCCTCCCGTCGTC
GTGAAGGTGGAAGACTTCGTGAGACAGGGCCCAGGGCCGGGAGACGGGCC
GCGCTTTCTCTTCATGCTTCGGCTCGAGGACGACGACGGAATCGTGGATG
CGGTGGCCGCGGGCTCGGATGCCTCGCATCTCCTGCCGGGGTCACCATCC
CCAGAGCAATTCCATCGCAGCGAGGAGGTGCGGGGGAGGGTGCAAAGGGC
CCTCGAGAGGCTGGAGGCTGAAGGAAGCGGGATGTGGGGACTGCGCCTGC
GTTCTTATTTGACGCCCATGGAGGGCGATCAAGCCTACTGCAAACGCTAT
AGTATCGTCTCGCCGTCATCATTGGCGGAG back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig8106:112..10191+ >mRNA_M-pyrifera_M_contig8106.18960.1 ID=mRNA_M-pyrifera_M_contig8106.18960.1|Name=mRNA_M-pyrifera_M_contig8106.18960.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3510bp|location=Sequence derived from alignment at M-pyrifera_M_contig8106:112..10191+ (Macrocystis pyrifera P11B4 male) ATGCGAGAGGCTTTCCAGAAGGGCCTTCCGATCGACAGCGGCGGTAGAGG CGGCGGCGGCGGCAGCGTTGGCGACGATGATGCTGACCCCTTTGAGGACT CGTCTCCTTCGGGTCCTGACGCGGGGGGCGGCCAAACTGATTCGGTGCTG TCGGCGGCGGTGTGGGAGGTGCAGGCGTCTTCGAACACCTACACGATGTC GCAAGTGGACCATGATAGATGCGAGAGGCTTTCCAGAAGGGCCTTCCGAT CGACAGCGGCGGTAGAGGCGGCGGCGGCGGCAGCGTTGGCGACGATGATG CTGACCCCTTTGAGGACTCGTCTCCTTCGGGTCCTGACGCGGGGGGCGGC CAAACTGATTCGGTGCTGTCGGCGGCGGTGTGGGAGGTGCAGGCGTCTTC GAACACCTACACGATGTCGCAAGTGGACCATGATAGGTGCAACGCCTTGG ACGCGTGGTTCAAAACCAACGCCCCGCGCCTCTGGCTGAAGCAGTCTTCG GAGCCCAAGATATGGGTGCAGGACATTTTCCGACGACCGCCAGAAGGAAG GGTGGCCACGGAAACAGAAGTGCAACGCCTTGGACGCGTGGTTCAAAACC AACGCCCCGCGCCTCTGGCTGAAGCAGTCTTCGGAGCCCAAGATATGGGT GCAGGACATTTTCCGACGACCGCCAGAAGGAAGGGTGGCCACGGAAACAG AAGTTGACCTGATTTGCTGCTTGGCATCCAAGCACGAGGATTCTGGAGGC GGGTCCGGCTCCCTGTTGAACGTGTACGTGGCCGACGGCACAGGGTTTGC AACCTCGAGGACGCCGACCATGGCTCTGAATAGACGCGACGCCGCGCTGC AGAAGGGGATGCGCGCGGCGTTGGGCAAGCCTGATTGGTCTCCCGGAAAC CCGCACCCGCATCCCTTTCCGGCTTACCTTAAGGTCGATGTCATGGAAAA CAAGAAGGAGGTTGACCTGATTTGCTGCTTGGCATCCAAGCACGAGGATT CTGGAGGCGGGTCCGGCTCCCTGTTGAACGTGTACGTGGCCGACGGCACA GGGTTTGCAACCTCGAGGACGCCGACCATGGCTCTGAATAGACGCGACGC CGCGCTGCAGAAGGGGATGCGCGCGGCGTTGGGCAAGCCTGATTGGTCTC CCGGAAACCCGCACCCGCATCCCTTTCCGGCTTACCTTAAGGTCGATGTC ATGGAAAACAAGAAGGAGTGGGAGTCGCTGAAGCTGTCACAGGGCATGTG GATCCGCCTGAGGCGGCTGACCATCACGAAGAACAGGAACACCTCTTTCA TGTCGGCGAAGATGAAGGAGAGCACCTCGAGCGTCAATCCTTTGCACCCA AGCATGGCGGAGGTGCAGACGATTGCCATCTCCCACGAGCACAGCTGCGC GAACGCCAACCGAAACGCCGGCACCCCAACCCCTCCTCTCGGGGGCGCGG GCAACGAGACCGCACAAGATGTCCCTCGTGCTAACGGCGACATACCCGGC CCCGCTCCTGGCCCCACCCCTGACCCCGCCTCCGGGCCCGCCTCAGCCTC CGCCCGGAAGACCATCGCAGATGTCGGCAGGCCGGATAGCGGGGGGGCTC AAGCCTCGAAACTCGACGGGGGCGTTGTCTCAAGCGCCCCACCAGAGAGG GGCCGGCGGGAGGATTCTTCTAGGCCTCAAGTCGAGGGAGGCACGTCGCA GAAGGAACAGACCACCCACCCGCCGGATTCCCCCGCGACGTCCCAGCCCG AACGGAGGGAGGCGGGGGGGGGAGGGAGTGCTTTCGGTGGTACCGCCGTA GCTGCTGCCAGGGGCGTTGTTAGTGGTTGCGCGGCTAGTGGGGGTGGGGA GGGGTCGGGAGAGGCGTCTCGGCGAGGCACGAAGCGGGCTTTGCCGGCGG CGGGTGTGGAGGGGGCGGAGAAGAGATCCGTAGCACCGGCCAGCTGTGGA CCGTTGTCGAACCTGGGGGCGGTGAGGCGCAAGGCCGCCCCGGAGGCGTT CGACGCAAGGGTTAGGATCACCGCTCACTTCCCTTCGAATTGGGAGTCGC TGAAGCTGTCACAGGGCATGTGGATCCGCCTGAGGCGGCTGACCATCACG AAGAACAGGAACACCTCTTTCATGTCGGCGAAGATGAAGGAGAGCACCTC GAGCGTCAATCCTTTGCACCCAAGCATGGCGGAGGTGCAGACGATTGCCA TCTCCCACGAGCACAGCTGCGCGAACGCCAACCGAAACGCCGGCACCCCA ACCCCTCCTCTCGGGGGCGCGGGCAACGAGACCGCACAAGATGTCCCTCG TGCTAACGGCGACATACCCGGCCCCGCTCCTGGCCCCACCCCTGACCCCG CCTCCGGGCCCGCCTCAGCCTCCGCCCGGAAGACCATCGCAGATGTCGGC AGGCCGGATAGCGGGGGGGCTCAAGCCTCGAAACTCGACGGGGGCGTTGT CTCAAGCGCCCCACCAGAGAGGGGCCGGCGGGAGGATTCTTCTAGGCCTC AAGTCGAGGGAGGCACGTCGCAGAAGGAACAGACCACCCACCCGCCGGAT TCCCCCGCGACGTCCCAGCCCGAACGGAGGGAGGCGGGGGGGGGAGGGAG TGCTTTCGGTGGTACCGCCGTAGCTGCTGCCAGGGGCGTTGTTAGTGGTT GCGCGGCTAGTGGGGGTGGGGAGGGGTCGGGAGAGGCGTCTCGGCGAGGC ACGAAGCGGGCTTTGCCGGCGGCGGGTGTGGAGGGGGCGGAGAAGAGATC CGTAGCACCGGCCAGCTGTGGACCGTTGTCGAACCTGGGGGCGGTGAGGC GCAAGGCCGCCCCGGAGGCGTTCGACGCAAGGGTTAGGATCACCGCTCAC TTCCCTTCGAATGTGGAAGACTTCGTGAGACAGGGCCCAGGGCCGGGAGA CGGGCCGCGCTTTCTCTTCATGCTTCGGCTCGAGGACGACGACGGAATCG TGGATGCGGTGGCCGCGGGCTCGGATGCCTCGCATCTCCTGCCGGGGTCA CCATCCCCAGAGCAATTCCATCGCAGCGAGGAGGTGCGGGGGAGGGTGCA AAGGGCCCTCGAGAGGCTGGAGGCTGAAGGAAGCGGGATGTGGGGACTGC GCCTGCGTTCTTATTTGACGCCCATGGAGGGCGATCAAGCCTACTGCAAA CGCTATAGTATCGTCTCGCCGTCATCATTGGCGGAGGTGGAAGACTTCGT GAGACAGGGCCCAGGGCCGGGAGACGGGCCGCGCTTTCTCTTCATGCTTC GGCTCGAGGACGACGACGGAATCGTGGATGCGGTGGCCGCGGGCTCGGAT GCCTCGCATCTCCTGCCGGGGTCACCATCCCCAGAGCAATTCCATCGCAG CGAGGAGGTGCGGGGGAGGGTGCAAAGGGCCCTCGAGAGGCTGGAGGCTG AAGGAAGCGGGATGTGGGGACTGCGCCTGCGTTCTTATTTGACGCCCATG GAGGGCGATCAAGCCTACTGCAAACGCTATAGTATCGTCTCGCCGTCATC ATTGGCGGAG back to top
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