mRNA_M-pyrifera_M_contig809.18920.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig809.18920.1 vs. uniprot
Match: D7G5R5_ECTSI (Electron transfer flavoprotein subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5R5_ECTSI) HSP 1 Score: 430 bits (1105), Expect = 1.400e-148 Identity = 222/257 (86.38%), Postives = 241/257 (93.77%), Query Frame = 2 Query: 53 MRVLVGVKRVVDYAVKVRIQPDKAGVELKNVKMSMNPFCENAMEEAVRLKEQKKASEIIAVSVGPKASRDTIRTALAMGADRGIHVVTDETVRIDQALEPLAVARLLKKVVEEQEVDLVLLGKQSIDGDCSQTGPMLAGMLGWPQATFAAKLVVGDDGKKLEVERETDTGTQVLSMSLPAVVTADLRLNEPRYATLPNIMKAKKKKVDELVAADMGVDLKPRNTVIEVVPPPAREGGVMVESVDELLEKLKNEAGVL 823 MRV+VGVKRVVDYAVKVRIQPDKAGVELKNVKMSMNPFCENAMEEAV+LKE K ASE+IAVS+GPKA++DT+RTALAMGADRG+HV+TD+ VR DQ LEPLAVA LLKKVVEEQ+VDLVLLGKQSIDGDCSQTGPMLAGMLGWPQATFAAK+ V + GK+LEVERETDTGTQVLS+ LPAVVTADLRLNEPRYATLPNIMKAKKK VD L AADMGVDLKPR TVIEVVPPP R+GGV+VESVDEL++KLK EAGVL Sbjct: 1 MRVMVGVKRVVDYAVKVRIQPDKAGVELKNVKMSMNPFCENAMEEAVKLKETKAASEVIAVSIGPKAAKDTLRTALAMGADRGVHVMTDDAVRTDQGLEPLAVAGLLKKVVEEQKVDLVLLGKQSIDGDCSQTGPMLAGMLGWPQATFAAKVTVVEAGKQLEVERETDTGTQVLSVPLPAVVTADLRLNEPRYATLPNIMKAKKKTVDVLTAADMGVDLKPRTTVIEVVPPPVRQGGVIVESVDELIDKLKTEAGVL 257
BLAST of mRNA_M-pyrifera_M_contig809.18920.1 vs. uniprot
Match: A0A7S2HH98_9STRA (Electron transfer flavoprotein subunit beta n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HH98_9STRA) HSP 1 Score: 346 bits (887), Expect = 1.800e-115 Identity = 185/261 (70.88%), Postives = 215/261 (82.38%), Query Frame = 2 Query: 53 MRVLVGVKRVVDYAVKVRIQPD-KAGVELKNVKMSMNPFCENAMEEAVRLKEQKKASEIIAVSVGPKASRDTIRTALAMGADRGIHVVTDETVRID-QALEPLAVARLLKKVVEEQEVDLVLLGKQSIDGDCSQTGPMLAGMLGWPQATFAAKLVVGDDGKKLEVERETDTGTQVLSM-SLPAVVTADLRLNEPRYATLPNIMKAKKKKVDELVAADMGVDLKPRNTVIEVVPPPAREGGVMVESVDELLEKLKNEAGVLG 826 MRVLVGVKRVVDYAVKVR+ PD K+GV+L NVKMSMNPFCE A+EEAVRLKE K A E++AVSVGPK +T+RTALAMG DR +HV T +R D L+PL+VAR+L+KVVE++E DLV+LGKQSID DC QTGPMLAG LGWPQ TFAAKL V D G LEVERETD GT+ + + +LPAV+T DLRLNEPRYATLPNIMKAKKKKVD + A D GVDL PRN V+EV PPAR+ GV+VE VD+L++KLKNEAGV+ Sbjct: 1 MRVLVGVKRVVDYAVKVRVNPDGKSGVDLANVKMSMNPFCEIAVEEAVRLKESKAAKEVVAVSVGPKQCTETLRTALAMGCDRAVHVQT--ALRTDYMELQPLSVARILEKVVEKEEPDLVVLGKQSIDSDCGQTGPMLAGFLGWPQVTFAAKLDVVDGGSSLEVERETDAGTETIRIPALPAVITCDLRLNEPRYATLPNIMKAKKKKVDTMNAEDFGVDLTPRNEVLEVYEPPARKEGVIVEDVDQLVDKLKNEAGVIS 259
BLAST of mRNA_M-pyrifera_M_contig809.18920.1 vs. uniprot
Match: A0A835Z8U7_9STRA (Electron transfer flavoprotein subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U7_9STRA) HSP 1 Score: 345 bits (885), Expect = 3.040e-115 Identity = 183/251 (72.91%), Postives = 209/251 (83.27%), Query Frame = 2 Query: 53 MRVLVGVKRVVDYAVKVRIQPDKAGVELKNVKMSMNPFCENAMEEAVRLKEQKKASEIIAVSVGPKASRDTIRTALAMGADRGIHVVTDETVRIDQALEPLAVARLLKKVVEEQEVDLVLLGKQSIDGDCSQTGPMLAGMLGWPQATFAAKLVVGDDGKKLEVERETDTGTQVLSMSLPAVVTADLRLNEPRYATLPNIMKAKKKKVDELVAADMGVDLKPRNTVIEVVPPPAREGGVMVESVDELLEKLK 805 MRVLV VKRVVDYAVKVR++PDK VEL+NVKMSMNPFCENAMEEAVRLKE K A+EI+AVSVGPK +++T+RTALAMGADRG+H+VTD +R DQ L+PLAVA+LL+ VV+E + DLVL+GKQ+IDGD QTGPMLAG+LGWPQATFAAKL V D K++ VERETDTGTQ L M LPAVVTADLRLN PRYATLPNIMKAKKK + AA GVDL PRN V V PP R G +VESVD+L+ KLK Sbjct: 1 MRVLVAVKRVVDYAVKVRVRPDKTAVELQNVKMSMNPFCENAMEEAVRLKEAKLATEIVAVSVGPKQAQETLRTALAMGADRGVHIVTD--MRADQELQPLAVAKLLRTVVDEVKPDLVLMGKQAIDGDNCQTGPMLAGLLGWPQATFAAKLEVADSKKEVTVERETDTGTQKLQMGLPAVVTADLRLNAPRYATLPNIMKAKKKPIATRDAAAAGVDLAPRNKVTNVTDPPPRAAGAVVESVDDLVAKLK 249
BLAST of mRNA_M-pyrifera_M_contig809.18920.1 vs. uniprot
Match: A0A7S2WVS0_9STRA (Electron transfer flavoprotein subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVS0_9STRA) HSP 1 Score: 340 bits (873), Expect = 2.650e-113 Identity = 173/259 (66.80%), Postives = 216/259 (83.40%), Query Frame = 2 Query: 47 GTMRVLVGVKRVVDYAVKVRIQPDKAGVELKNVKMSMNPFCENAMEEAVRLKEQKKASEIIAVSVGPKASRDTIRTALAMGADRGIHVVTDETVRIDQALEPLAVARLLKKVVEEQEVDLVLLGKQSIDGDCSQTGPMLAGMLGWPQATFAAKLVVGDDGKKLEVERETDTGTQVLSMSLPAVVTADLRLNEPRYATLPNIMKAKKKKVDELVAADMGVDLKPRNTVIEVVPPPAREGGVMVESVDELLEKLKNEAGVL 823 GTMR+LVGVKRV+DY KVR+ +K+GVEL NVKMS+NPFCE A+EEAVRLKEQ A+EI+AVSVGPK +++ IR+ALAMGADRG+HV TD +R+DQ L+PLAVARLLK+VV++++ LV+LGKQSIDGDC+QTGPMLA +LGW Q TFA KL + +D +VERETD GT+ L ++LPA++TADLRLN PRYATLPNIMKAKKKKV+ L AA MGVD+ P+ V+EV PPAR+ G+ V VD+L++KLKNEA V+ Sbjct: 6 GTMRILVGVKRVIDYGAKVRVAANKSGVELGNVKMSINPFCEIAVEEAVRLKEQGVATEIVAVSVGPKQAQEQIRSALAMGADRGVHVTTD--MRLDQELQPLAVARLLKEVVDKEDPQLVILGKQSIDGDCAQTGPMLASLLGWAQGTFACKLDISEDKSSCDVERETDNGTETLKLNLPALITADLRLNLPRYATLPNIMKAKKKKVETLDAASMGVDITPQLEVVEVSDPPARQAGITVGDVDDLVDKLKNEASVI 262
BLAST of mRNA_M-pyrifera_M_contig809.18920.1 vs. uniprot
Match: A0A7S2H2C8_9STRA (Electron transfer flavoprotein subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H2C8_9STRA) HSP 1 Score: 338 bits (868), Expect = 1.680e-112 Identity = 172/257 (66.93%), Postives = 214/257 (83.27%), Query Frame = 2 Query: 53 MRVLVGVKRVVDYAVKVRIQPDKAGVELKNVKMSMNPFCENAMEEAVRLKEQKKASEIIAVSVGPKASRDTIRTALAMGADRGIHVVTDETVRIDQALEPLAVARLLKKVVEEQEVDLVLLGKQSIDGDCSQTGPMLAGMLGWPQATFAAKLVVGDDGKKLEVERETDTGTQVLSMSLPAVVTADLRLNEPRYATLPNIMKAKKKKVDELVAADMGVDLKPRNTVIEVVPPPAREGGVMVESVDELLEKLKNEAGVL 823 MRVLVGVKRV+DYAVKVR+ DK+GVEL NVKMSMNPFCE A+EEA+RLKE+K A+E+IAVSVGPK +++ IRTALAMG DRG+HV TD +R+DQ L+PLAVA+LLK+VV +E D+V+LGKQSIDGDC+QTGPMLA +L WPQ TFA+K+ + DD +EVERETD GT+V+ + +PA++TADLRLNEPRYATLPNIMKAKKKK+ + AA MGV+L+P V V P AR G+ VE+VD+LL+KL+NEA + Sbjct: 10 MRVLVGVKRVIDYAVKVRVAGDKSGVELSNVKMSMNPFCEIAVEEAIRLKEKKIATEVIAVSVGPKQAQEQIRTALAMGCDRGVHVTTD--LRLDQELQPLAVAKLLKEVVLNEEPDMVILGKQSIDGDCAQTGPMLAALLNWPQGTFASKVTMSDDLSSVEVERETDNGTEVIDLKMPALITADLRLNEPRYATLPNIMKAKKKKIQSIDAASMGVNLEPGYQVTGVNEPAARAAGIKVETVDDLLDKLRNEASCI 264
BLAST of mRNA_M-pyrifera_M_contig809.18920.1 vs. uniprot
Match: A0A6V1TBV2_HETAK (Electron transfer flavoprotein subunit beta n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TBV2_HETAK) HSP 1 Score: 337 bits (864), Expect = 1.180e-111 Identity = 183/260 (70.38%), Postives = 215/260 (82.69%), Query Frame = 2 Query: 50 TMRVLVGVKRVVDYAVKVRIQPDKAGVELKNVKMSMNPFCENAMEEAVRLKEQKKASEIIAVSVGPKASRDTIRTALAMGADRGIHVVTDETVRIDQALEPLAVARLLKKVVEEQEVDLVLLGKQSIDGDCSQTGPMLAGMLGWPQATFAAKLVVGDDGKKLEVERETDTGTQVLSMSLPAVVTADLRLNEPRYATLPNIMKAKKKKVDELVAAD-MGVD-LKPRNTVIEVVPPPAREGGVMVESVDELLEKLKNEAGVL 823 +M+VLVGVKRV+DYAVKVR+ DK+GVEL NVKMSMNPFCENA+EEA+RLKE+K ASE+IA S+GP +++TIRTALAMGADRGIH+ TD RIDQ LEPLAVA+L V +E+EVDLV+LGKQ+IDGD +QTGPMLAG+LGWPQATFAA V DG KL VERETDTGT+ L + PAV+T DLRLNEPRYATLPNIMKAKKK + AA+ +G + L PR TV+EV P AR+ GVMV SVDELLEKL++EA VL Sbjct: 26 SMKVLVGVKRVIDYAVKVRVTADKSGVELNNVKMSMNPFCENAVEEAIRLKEKKVASEVIACSIGPAKAQETIRTALAMGADRGIHLKTDA--RIDQELEPLAVAKLFAAVAKEEEVDLVILGKQAIDGDNAQTGPMLAGLLGWPQATFAAG--VAADGAKLTVERETDTGTETLELDAPAVLTCDLRLNEPRYATLPNIMKAKKKPIAARAAAEVLGAEALAPRMTVVEVTEPEARQAGVMVGSVDELLEKLRSEAKVL 281
BLAST of mRNA_M-pyrifera_M_contig809.18920.1 vs. uniprot
Match: A0A7S2CKC0_9STRA (Electron transfer flavoprotein subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CKC0_9STRA) HSP 1 Score: 336 bits (862), Expect = 1.270e-111 Identity = 174/263 (66.16%), Postives = 212/263 (80.61%), Query Frame = 2 Query: 38 HTTGTMRVLVGVKRVVDYAVKVRIQPDKAGVELKNVKMSMNPFCENAMEEAVRLKEQKKASEIIAVSVGPKASRDTIRTALAMGADRGIHVVTDETVRIDQALEPLAVARLLKKVVEEQEVDLVLLGKQSIDGDCSQTGPMLAGMLGWPQATFAAKLVVGDDGKKLEVERETDTGTQVLSMSLPAVVTADLRLNEPRYATLPNIMKAKKKKVDELVAADMGVDLKPRNTVIEVVPPPAREGGVMVESVDELLEKLKNEAGVLG 826 H M+VLVGVKRV+DYAVKVRI DK GVEL NVKMSMNPFCE A+EEA+R+KE K A+EI+AVSVGPK +++ IRTALAMGADRG+HV TD +R+DQ L+PLAVA+LLK++VE++ D+VLLGKQSIDGDC+QTGPMLA MLGWPQAT A++L D G + ERETD GT+V+ + P VVTADLRLNEPRYA LPNIMKAKKKK++ + AA +GVDL PR V+E+ PP R G++VE V L++KLKNEA V+ Sbjct: 5 HPPSKMKVLVGVKRVIDYAVKVRIAADKKGVELANVKMSMNPFCEIAVEEAIRMKEGKTATEIVAVSVGPKNAQEQIRTALAMGADRGVHVTTD--MRLDQELQPLAVAKLLKEIVEKEAPDVVLLGKQSIDGDCAQTGPMLAAMLGWPQATMASELTFADGG--VTAERETDNGTEVIQVGTPLVVTADLRLNEPRYAKLPNIMKAKKKKIEAIDAASLGVDLSPRIEVVEMNDPPTRAAGIVVEDVTALVDKLKNEASVIA 263
BLAST of mRNA_M-pyrifera_M_contig809.18920.1 vs. uniprot
Match: A0A7S3PSZ8_9STRA (Electron transfer flavoprotein subunit beta n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PSZ8_9STRA) HSP 1 Score: 336 bits (861), Expect = 1.270e-111 Identity = 175/257 (68.09%), Postives = 211/257 (82.10%), Query Frame = 2 Query: 53 MRVLVGVKRVVDYAVKVRIQPDKAGVELKNVKMSMNPFCENAMEEAVRLKEQKKASEIIAVSVGPKASRDTIRTALAMGADRGIHVVTDETVRIDQALEPLAVARLLKKVVEEQEVDLVLLGKQSIDGDCSQTGPMLAGMLGWPQATFAAKLVVGDDGKKLEVERETDTGTQVLSMSLPAVVTADLRLNEPRYATLPNIMKAKKKKVDELVAADMGVDLKPRNTVIEVVPPPAREGGVMVESVDELLEKLKNEAGVL 823 MR+LVGVKRV+DYAVKVR+ PDK GVELKNVKMSMNPFCE A+EEAVRLKE E++AVSVGPK +++TIRTALAMGADRGIH+ TD +R DQ L+PLAV++LLK +VE++ D+V+LGKQ+ID D +QTG MLAG+L WPQATFA+K+ V D K L V RE D G Q LSM+LPAV+TADLRLNEPRYATLPNIMKAKKKK+D + A D+GVDL PR V++V PP R G+MV+ VD L++KLKNEA V+ Sbjct: 1 MRLLVGVKRVIDYAVKVRVTPDKTGVELKNVKMSMNPFCEIAVEEAVRLKEAGIVKEVVAVSVGPKQAQETIRTALAMGADRGIHITTD--MRTDQELQPLAVSKLLKSIVEKETPDIVVLGKQAIDDDSNQTGQMLAGLLDWPQATFASKVKVED--KNLTVTREIDGGVQTLSMTLPAVITADLRLNEPRYATLPNIMKAKKKKIDTIKAEDLGVDLSPRLKVVKVEDPPVRSAGIMVDGVDALVDKLKNEASVI 253
BLAST of mRNA_M-pyrifera_M_contig809.18920.1 vs. uniprot
Match: A0A7S2EH51_TRICV (Electron transfer flavoprotein subunit beta n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EH51_TRICV) HSP 1 Score: 330 bits (845), Expect = 6.510e-109 Identity = 183/270 (67.78%), Postives = 219/270 (81.11%), Query Frame = 2 Query: 26 VAQRHTTGTMRVLVGVKRVVDYAVKVRIQPD-KAGVELKNVKMSMNPFCENAMEEAVRLKEQKKASEIIAVSVGPKASRDTIRTALAMGADRGIHVVTDETVRID-QALEPLAVARLLKKVVEEQEVDLVLLGKQSIDGDCSQTGPMLAGMLGWPQATFAAKLVVGDDGKKLEVERETDTGTQVLSM-SLPAVVTADLRLNEPRYATLPNIMKAKKKKVDELVAADM-GVDLKPRNTVIEVVPPPAREGGVMVESVDELLEKLKNEAGVL 823 +A+ T MR+LVGVKR VDYA KVR+ PD K+GV+L VKMSMNPFCE A+EEAVRLKE K ASE++A+SVGPK +T+RTALAMG DR +HV TD +R D L+PL+V R+ ++VVE+++ DLVL+GKQ ID D QTGPMLAG+LGWPQATFAAK+ V +DG L VERETD+GT+ + + SLPAVVT DLRLNEPRYATLPNIMKAKKKKVD L A D+ GVDLKPRN V+EV PPAR+ GVMVESVDELL+KL+NEA V+ Sbjct: 5 LARSLTDRKMRILVGVKRAVDYAAKVRVNPDGKSGVDLSTVKMSMNPFCEIAVEEAVRLKEAKAASEVVALSVGPKQCSETLRTALAMGCDRAVHVQTD--LRGDYMELQPLSVTRIFERVVEKEKPDLVLVGKQGIDSDAGQTGPMLAGLLGWPQATFAAKVEV-EDGGGLTVERETDSGTETVRLKSLPAVVTCDLRLNEPRYATLPNIMKAKKKKVDVLNAEDLDGVDLKPRNEVLEVYEPPARKEGVMVESVDELLDKLRNEANVI 271
BLAST of mRNA_M-pyrifera_M_contig809.18920.1 vs. uniprot
Match: H3GAL6_PHYRM (Electron transfer flavoprotein subunit beta n=17 Tax=Peronosporaceae TaxID=4777 RepID=H3GAL6_PHYRM) HSP 1 Score: 324 bits (830), Expect = 5.900e-107 Identity = 170/257 (66.15%), Postives = 210/257 (81.71%), Query Frame = 2 Query: 53 MRVLVGVKRVVDYAVKVRIQPDKAGVELKNVKMSMNPFCENAMEEAVRLKEQKKASEIIAVSVGPKASRDTIRTALAMGADRGIHVVTDETVRIDQALEPLAVARLLKKVVEEQEVDLVLLGKQSIDGDCSQTGPMLAGMLGWPQATFAAKLVVGDDGKKLEVERETDTGTQVLSMSLPAVVTADLRLNEPRYATLPNIMKAKKKKVDELVAADMGVDLKPRNTVIEVVPPPAREGGVMVESVDELLEKLKNEAGVL 823 M+VLV VKRVVDYAVK+R++P GV+LKNVKMSMNPFCE A+EEA+RLKE+K A+E++AVS+GPK S++T+RTALAMGADRGIH+ TD +R DQ L+PLAVA+LLK++V ++E LV+ GKQSID D +QTGPMLAG+L W Q TFA+ + V DG + V RETD+G + L + LPAVVTADLRLNEPRYATLPNIMKAKKKK++ L A GVDL PR V+EV P AR+ G+ V SVDEL++KLKNEAGV+ Sbjct: 1 MKVLVPVKRVVDYAVKIRVEPK--GVDLKNVKMSMNPFCEIAVEEAIRLKEKKLATEVVAVSIGPKQSQETLRTALAMGADRGIHITTD--LRTDQELQPLAVAKLLKEIVAKEEPTLVICGKQSIDADAAQTGPMLAGLLDWSQGTFASDVTV--DGDAVSVTRETDSGVETLKLGLPAVVTADLRLNEPRYATLPNIMKAKKKKIETLTADSFGVDLTPRIEVVEVKDPAARKAGIKVASVDELVDKLKNEAGVI 251 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig809.18920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig809.18920.1 >prot_M-pyrifera_M_contig809.18920.1 ID=prot_M-pyrifera_M_contig809.18920.1|Name=mRNA_M-pyrifera_M_contig809.18920.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=259bp MRVLVGVKRVVDYAVKVRIQPDKAGVELKNVKMSMNPFCENAMEEAVRLKback to top mRNA from alignment at M-pyrifera_M_contig809:24201..31182+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig809.18920.1 ID=mRNA_M-pyrifera_M_contig809.18920.1|Name=mRNA_M-pyrifera_M_contig809.18920.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6982bp|location=Sequence derived from alignment at M-pyrifera_M_contig809:24201..31182+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig809:24201..31182+ >mRNA_M-pyrifera_M_contig809.18920.1 ID=mRNA_M-pyrifera_M_contig809.18920.1|Name=mRNA_M-pyrifera_M_contig809.18920.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1554bp|location=Sequence derived from alignment at M-pyrifera_M_contig809:24201..31182+ (Macrocystis pyrifera P11B4 male)back to top |