mRNA_M-pyrifera_M_contig80795.18904.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig80795.18904.1
Unique NamemRNA_M-pyrifera_M_contig80795.18904.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig80795.18904.1 vs. uniprot
Match: A0A7S1G396_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G396_9STRA)

HSP 1 Score: 229 bits (584), Expect = 9.360e-68
Identity = 127/258 (49.22%), Postives = 155/258 (60.08%), Query Frame = 1
Query:   10 PKTGACLGKPLVGHKAWITSLAWEPLHLCAPSRRLASSSRDGTVRVWDALRNAFLFSLAGHTASVEVVLWGGTGLLYTASRDRSVRVWSTQGDARGKVVRILNGHAHRVNTLALSTEHTLRTGAFALGGKTMEIPKTTSAEKSTKTSTKTKATPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDFTLFLWEPAVDKKPVARMTGHQQAVNHLAFSPDGRWIASASFDNKVKLWNG 783
            P+TG  + KPL GHK WITSLAWEP+H      RLASSS+D TV+VW+    + + SL+GHT SVE V WGG GLLYTASRDRS++VWS +   RGK+VR L GHAHR+NTLALST++  RTG F   GK     K  S E++ + + K  A  +                                                GSDDFTLFLWEPA  K+P+ RMTGHQQ VNH+AFSPDGR+ ASASFD KV++W+G
Sbjct:  308 PRTGKEVCKPLKGHKQWITSLAWEPMHSNGACERLASSSKDKTVKVWNVRTASIVASLSGHTDSVECVKWGGEGLLYTASRDRSIKVWSPE--ERGKLVRTLVGHAHRINTLALSTDYVCRTGPFDHTGK-----KPASVEEAVEAAKKRYAEAKAQGPERLIS---------------------------------------GSDDFTLFLWEPATSKRPIERMTGHQQLVNHIAFSPDGRYAASASFDKKVRVWDG 519          
BLAST of mRNA_M-pyrifera_M_contig80795.18904.1 vs. uniprot
Match: A0A1R0GZY0_9FUNG (Notchless protein-like protein n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GZY0_9FUNG)

HSP 1 Score: 219 bits (558), Expect = 4.780e-67
Identity = 114/261 (43.68%), Postives = 154/261 (59.00%), Query Frame = 1
Query:    1 IWSPKTGACLGKPLVGHKAWITSLAWEPLHLCAPSRRLASSSRDGTVRVWDALRNAFLFSLAGHTASVEVVLWGGTGLLYTASRDRSVRVWSTQGDARGKVVRILNGHAHRVNTLALSTEHTLRTGAFALGGKTMEIPKTTSAEKSTKTSTKTKATPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDFTLFLWEPAVDKKPVARMTGHQQAVNHLAFSPDGRWIASASFDNKVKLWNG 783
            +W PKTG  LG+ L GH+ WIT LAWEPLHL   + RLASSS+DGTVRVWD      LFS+ GHTA+V  V WGG G++YT+S+D+++++W+ +G    K+++ L+GHAH VN+LA+ST   +RTGAF   G   + P     EK+ + +    A                                                   GSDD+T++LW+P  +KKP+AR+ GHQ+ VNH++FSPDGR IASASFDN VKLW+G
Sbjct:    7 LWDPKTGEQLGRTLSGHRKWITCLAWEPLHLNPKANRLASSSKDGTVRVWDTTLRTCLFSVGGHTAAVTCVCWGGDGIIYTSSQDKTIKMWNGEG----KLIKTLSGHAHWVNSLAISTGFVMRTGAFDHTGTRYDTP-----EKAIRMNLPLTA------------------------------QERALERFKEALGSGTERLVSGSDDYTMYLWDPKNNKKPIARLVGHQKIVNHVSFSPDGRLIASASFDNSVKLWDG 228          
BLAST of mRNA_M-pyrifera_M_contig80795.18904.1 vs. uniprot
Match: A0A836CH64_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH64_9STRA)

HSP 1 Score: 224 bits (572), Expect = 8.930e-67
Identity = 124/260 (47.69%), Postives = 146/260 (56.15%), Query Frame = 1
Query:   10 PKTGACLGKPLVGHKAWITSLAWEPLHLCAPSRRLASSSRDGTVRVWDALRNAFLFSLAGHTASVEVVLWGGTGLLYTASRDRSVRVWSTQGDAR--GKVVRILNGHAHRVNTLALSTEHTLRTGAFALGGKTMEIPKTTSAEKSTKTSTKTKATPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDFTLFLWEPAVDKKPVARMTGHQQAVNHLAFSPDGRWIASASFDNKVKLWNG 783
            P TG  +G PLV HK W+TSL+WEP+H  A   RLASSS+DG V+VW+      L +L+GH  SVE V WGG GLLY+ASRDR++ VWS  G+ R  G +VR L GH HRVNTLALS E+ LRTG F     T   P+   A    +        PE                                                GSDDFTLFLW P  DKKP+AR+TGHQQAVNH+AFSPDGR  ASASFD KVK+W+G
Sbjct:  219 PATGQPIGSPLVSHKQWVTSLSWEPMHKNAACERLASSSKDGLVKVWNVRTGRCLVTLSGHADSVECVKWGGEGLLYSASRDRNIMVWSMDGEGRKFGILVRTLAGHGHRVNTLALSCEYVLRTGPFGHKPVTFATPEEAQAAALARYQEAKGTDPERLVS--------------------------------------------GSDDFTLFLWNPVEDKKPLARLTGHQQAVNHIAFSPDGRRFASASFDKKVKVWDG 434          
BLAST of mRNA_M-pyrifera_M_contig80795.18904.1 vs. uniprot
Match: A0A482SD67_9ARCH (NLE domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SD67_9ARCH)

HSP 1 Score: 210 bits (535), Expect = 7.910e-61
Identity = 116/258 (44.96%), Postives = 145/258 (56.20%), Query Frame = 1
Query:   16 TGACLGKPLVGHKAWITSLAWEPLHLCAPSRRLASSSRDGTVRVWDALRNAFLFSLAGHTASVEVVLWGGTGLLYTASRDRSVRVWSTQGDARGK--VVRILNGHAHRVNTLALSTEHTLRTGAFALGGKTMEIPKTTSAEKSTKTSTKTKATPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDFTLFLWEPAVDKKPVARMTGHQQAVNHLAFSPDGRWIASASFDNKVKLWNG 783
            TG   G+PL GHK W+T+LA+EPLHL A S R+ASSS+D TV++W+        +++GH  SVE V WGGTGLLYTASRDR++RVW+  G  R +  +VR L GHAHR+NTLAL+T++  RTG+F L                    T    TPE                                                GSDDFTLF+W+P  +K P+ RM GHQQ VNH+AFSPDGR++ASASFD KVKLW G
Sbjct:  270 TGTQRGQPLRGHKKWVTALAFEPLHLNAHSTRMASSSKDQTVKIWNLSTGLCESTISGHADSVECVKWGGTGLLYTASRDRTIRVWAVDGHGRSQHMLVRTLVGHAHRINTLALNTDYLFRTGSFELA------------------QTNANLTPEEAQQVALKRYQTLVGGEGGQGERLVS----------------------GSDDFTLFMWQPTENKTPLIRMIGHQQLVNHIAFSPDGRYLASASFDKKVKLWCG 487          
BLAST of mRNA_M-pyrifera_M_contig80795.18904.1 vs. uniprot
Match: A0A7S3XZG7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZG7_HETAK)

HSP 1 Score: 209 bits (532), Expect = 8.970e-61
Identity = 119/263 (45.25%), Postives = 145/263 (55.13%), Query Frame = 1
Query:   10 PKTGACLGKPLVGHKAWITSLAWEPLHLCAPS--RRLASSSRDGTVRVWDALRNAFLFSLAGHTASVEVVLWGGTGLLYTASRDRSVRVWSTQ-GDARGKVVRILNGHAHRVNTLALSTEHTLRTGAFALGGKTMEIPKTTS--AEKSTKTSTKTKATPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDFTLFLWEPAVDKKPVARMTGHQQAVNHLAFSPDGRWIASASFDNKVKLWNG 783
            P +    G+PL GH+ W+TSLAWEPLH   P    RLAS+S+DGT ++W+        SL+GHT SVE V WGG GL+YTASRDR+++VW    G   G +VR L GH HRVNTLALS+++ LRTG F   G     P+  +  AE+   T   T+  PE                                                GSDDFTL LW P   K+PV R+TGHQQAVNHL FSPDGR  ASASFD KVK+W+G
Sbjct:  225 PASARPQGQPLTGHRQWVTSLAWEPLHRRRPHPCERLASASKDGTCKIWNVRTGRCEISLSGHTDSVECVKWGGEGLIYTASRDRTIKVWDADVGPKLGTLVRTLVGHGHRVNTLALSSDYVLRTGPFDHHGNRFASPEAAADAAEERYNTFKATQPGPERLVS--------------------------------------------GSDDFTLILWSPTEGKRPVTRLTGHQQAVNHLQFSPDGRHFASASFDKKVKVWDG 443          
BLAST of mRNA_M-pyrifera_M_contig80795.18904.1 vs. uniprot
Match: D7FYM1_ECTSI (NLE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM1_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 1.880e-60
Identity = 119/260 (45.77%), Postives = 143/260 (55.00%), Query Frame = 1
Query:   10 PKTGACLGKPLVGHKAWITSLAWEPLHLCAPSRRLASSSRDGTVRVWDALRNAFLFSLAGHTASVEVVLWGGTGLLYTASRDRSVRVWSTQGDAR--GKVVRILNGHAHRVNTLALSTEHTLRTGAFALGGKTMEIPKTTSAEKSTKTSTKTKATPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDFTLFLWEPAVDKKPVARMTGHQQAVNHLAFSPDGRWIASASFDNKVKLWNG 783
            P  G   G+PL  HK W+TSLAWEPLH  +   RLASSS+D  +++W+        +L+GH  SVE ++WGG GLLY+ASRDR+++VW+ +G+ R  G +VR L GH HRVNTLALS E  LRTG F   GK     K  S           K TPE                                                GSDDFTLFLW P   KKP+AR+TGHQQ VNHLAFSPDGR  ASASFD KVK+W+G
Sbjct:  226 PSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEAALRTGPF---GKEECALKAVS-----------KFTPEEAQAVALERYNLARGGEPERLVS-------------------------GSDDFTLFLWNPVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASFDKKVKVWDG 446          
BLAST of mRNA_M-pyrifera_M_contig80795.18904.1 vs. uniprot
Match: A0A1Y5IGK3_OSTTA (Notchless-like protein (Fragment) n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IGK3_OSTTA)

HSP 1 Score: 207 bits (527), Expect = 2.260e-60
Identity = 110/261 (42.15%), Postives = 142/261 (54.41%), Query Frame = 1
Query:    1 IWSPKTGACLGKPLVGHKAWITSLAWEPLHLCAPSRRLASSSRDGTVRVWDALRNAFLFSLAGHTASVEVVLWGGTGLLYTASRDRSVRVWSTQGDARGKVVRILNGHAHRVNTLALSTEHTLRTGAFALGGKTMEIPKTTSAEKSTKTSTKTKATPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDFTLFLWEPAVDKKPVARMTGHQQAVNHLAFSPDGRWIASASFDNKVKLWNG 783
            +W P +G   G PL GHK  +T++AWEP H+  P  R  S+S DG+VRVWDA+R   LF+++ HT ++  V WGG GL+YTASRD ++ VW       GKVVR L GHAH VN+LALS+E+ LRTG +   G   E      A+   +    T   PE                                                GSDDFT+F+WEP+  K P+ R+TGHQQ +NH+ FSPDGR+ ASASFD  VKLW+G
Sbjct:  179 LWDPTSGEARGGPLKGHKKHVTAIAWEPAHVAYPVVRFCSASADGSVRVWDAVRRVCLFTMSAHTKAISAVKWGGEGLIYTASRDTTIYVWDATD---GKVVRQLKGHAHWVNSLALSSEYALRTGPYDHTGAKPENDAQAKAQALKRYKEATGGKPERLVS--------------------------------------------GSDDFTMFMWEPSTSKTPLQRLTGHQQLINHVLFSPDGRYFASASFDKGVKLWDG 392          
BLAST of mRNA_M-pyrifera_M_contig80795.18904.1 vs. uniprot
Match: A4S646_OSTLU (NLE domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S646_OSTLU)

HSP 1 Score: 207 bits (526), Expect = 3.390e-60
Identity = 112/258 (43.41%), Postives = 142/258 (55.04%), Query Frame = 1
Query:   10 PKTGACLGKPLVGHKAWITSLAWEPLHLCAPSRRLASSSRDGTVRVWDALRNAFLFSLAGHTASVEVVLWGGTGLLYTASRDRSVRVWSTQGDARGKVVRILNGHAHRVNTLALSTEHTLRTGAFALGGKTMEIPKTTSAEKSTKTSTKTKATPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDFTLFLWEPAVDKKPVARMTGHQQAVNHLAFSPDGRWIASASFDNKVKLWNG 783
            P TG   G P+ GHK  +T+LAWEP H+  P  R  S+S DG+VRVWDA+R A LF+++ HT ++  V WGG GL+YTASRD ++ VW       GKVVR L GH H VN+LALSTE+ LRTG +   GK  E      A+  T+    T   PE                                                GSDD+T+F+WEP+  K P+ R+TGHQQ +NH+ FSPDGR+ ASASFD  VKLW+G
Sbjct:  201 PITGEARGGPMKGHKKHVTALAWEPAHVAYPVVRFCSASADGSVRVWDAVRRACLFTMSAHTKAIASVKWGGEGLIYTASRDTTIYVWDAND---GKVVRQLKGHGHWVNSLALSTEYALRTGPYDHTGKKPENDAQAKAQALTRYKAATGGKPERLVS--------------------------------------------GSDDYTMFMWEPSTTKTPLQRLTGHQQLINHVLFSPDGRYFASASFDKGVKLWDG 411          
BLAST of mRNA_M-pyrifera_M_contig80795.18904.1 vs. uniprot
Match: A0A137PF18_CONC2 (WD40 repeat-like protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137PF18_CONC2)

HSP 1 Score: 206 bits (524), Expect = 7.640e-60
Identity = 109/265 (41.13%), Postives = 151/265 (56.98%), Query Frame = 1
Query:   10 PKTGACLGKPLVGHKAWITSLAWEPLHLCAPSRRLASSSRDGTVRVWDALRNAFLFSLAGHTASVEVVLWGG--------TGLLYTASRDRSVRVWSTQGDARGKVVRILNGHAHRVNTLALSTEHTLRTGAFALGGKTMEIPKTTSAEKSTKTSTKTKATPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDFTLFLWEPAVDKKPVARMTGHQQAVNHLAFSPDGRWIASASFDNKVKLWN 780
            PKTG  +G PL GH+ W+TS+AWEP H+   + RLA++S+DGTVR+WD +R   + + A HT+SV  V WGG         G++YT S+DR+V++W+    A G +++ L+GHAH VNT+AL+T++ LRTG F   GK  + P+    +   + +   K   E                                                GSDDFT+FLW+P  + KP+ARMTGHQ+AVNH+ FSPDGR IASASFDN VK+W+
Sbjct:  199 PKTGQMIGNPLKGHRKWVTSIAWEPFHINPKNPRLATASKDGTVRIWDTVRRTTIMTFASHTSSVTCVKWGGGNDLAQFPQGIIYTTSQDRTVKLWNP---ATGAMIKSLSGHAHWVNTIALNTDYVLRTGQFDHTGKKFDTPEEGQVKALERYNEVVKGIGERIVT--------------------------------------------GSDDFTMFLWDPLRNDKPLARMTGHQKAVNHVNFSPDGRLIASASFDNSVKIWD 416          
BLAST of mRNA_M-pyrifera_M_contig80795.18904.1 vs. uniprot
Match: A0A4D9ARQ3_SALSN (Ribosome assembly protein 4 n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9ARQ3_SALSN)

HSP 1 Score: 199 bits (505), Expect = 2.180e-59
Identity = 106/247 (42.91%), Postives = 133/247 (53.85%), Query Frame = 1
Query:   46 GHKAWITSLAWEPLHLCAPSRRLASSSRDGTVRVWDALRNAFLFSLAGHTASVEVVLWGGTGLLYTASRDRSVRVWSTQGDARGKVVRILNGHAHRVNTLALSTEHTLRTGAFALGGKTMEIPKTTSAEKSTKTSTKTKA-TPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDFTLFLWEPAVDKKPVARMTGHQQAVNHLAFSPDGRWIASASFDNKVKLWNG 783
            GHK WIT ++WEP+HL AP  R  S+S+DG  R+WD      +  L GHT ++  V WGG G +YT S+D ++++W T    +GK++R L GH H VN+LALSTE+ LRTGAF   GK    P+      + +   K +   PE                                                GSDDFT+FLWEPA  K P  RMTGHQQ VNH+ FSPDG+WIASASFD  VKLWNG
Sbjct:    4 GHKKWITGISWEPVHLSAPCCRFVSASKDGDARIWDVAFKKCIICLTGHTLAITCVKWGGDGFIYTGSQDCTIKIWET---TQGKLIRELKGHGHWVNSLALSTEYVLRTGAFDHTGKQYSSPEEMKQVVALERYNKMRGGAPERLVS--------------------------------------------GSDDFTMFLWEPAASKHPKNRMTGHQQLVNHVYFSPDGQWIASASFDKSVKLWNG 203          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80795.18904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1G396_9STRA9.360e-6849.22Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A1R0GZY0_9FUNG4.780e-6743.68Notchless protein-like protein n=1 Tax=Smittium mu... [more]
A0A836CH64_9STRA8.930e-6747.69WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A482SD67_9ARCH7.910e-6144.96NLE domain-containing protein n=1 Tax=archaeon Tax... [more]
A0A7S3XZG7_HETAK8.970e-6145.25Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7FYM1_ECTSI1.880e-6045.77NLE domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A1Y5IGK3_OSTTA2.260e-6042.15Notchless-like protein (Fragment) n=1 Tax=Ostreoco... [more]
A4S646_OSTLU3.390e-6043.41NLE domain-containing protein n=1 Tax=Ostreococcus... [more]
A0A137PF18_CONC27.640e-6041.13WD40 repeat-like protein n=1 Tax=Conidiobolus coro... [more]
A0A4D9ARQ3_SALSN2.180e-5942.91Ribosome assembly protein 4 n=1 Tax=Salvia splende... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80795contigM-pyrifera_M_contig80795:1..936 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score217.6
Seed ortholog evalue6.8e-54
Seed eggNOG ortholog85681.XP_006445884.1
KEGG koko:K14855
Hectar predicted targeting categoryother localisation
GOsGO:0000027,GO:0000151,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005840,GO:0006996,GO:0007275,GO:0008150,GO:0009553,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0031461,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0048229,GO:0048856,GO:0065003,GO:0070013,GO:0070925,GO:0071826,GO:0071840,GO:0080008,GO:1902494,GO:1990234,GO:1990904
EggNOG free text desc.Notchless protein homolog
EggNOG OGs37PY7@33090,3G848@35493,KOG0271@1,KOG0271@2759
COG Functional cat.S
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons2
Model size783
Cds size783
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816712.80319-CDS-M-pyrifera_M_contig80795:0..6171622816712.80319-CDS-M-pyrifera_M_contig80795:0..617Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80795 1..617 +
1692278135.214027-CDS-M-pyrifera_M_contig80795:0..6171692278135.214027-CDS-M-pyrifera_M_contig80795:0..617Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80795 1..617 +
1622816712.815128-CDS-M-pyrifera_M_contig80795:770..9361622816712.815128-CDS-M-pyrifera_M_contig80795:770..936Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80795 771..936 +
1692278135.2273197-CDS-M-pyrifera_M_contig80795:770..9361692278135.2273197-CDS-M-pyrifera_M_contig80795:770..936Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80795 771..936 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80795.18904.1prot_M-pyrifera_M_contig80795.18904.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig80795 1..936 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig80795.18904.1

>prot_M-pyrifera_M_contig80795.18904.1 ID=prot_M-pyrifera_M_contig80795.18904.1|Name=mRNA_M-pyrifera_M_contig80795.18904.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=261bp
IWSPKTGACLGKPLVGHKAWITSLAWEPLHLCAPSRRLASSSRDGTVRVW
DALRNAFLFSLAGHTASVEVVLWGGTGLLYTASRDRSVRVWSTQGDARGK
VVRILNGHAHRVNTLALSTEHTLRTGAFALGGKTMEIPKTTSAEKSTKTS
TKTKATPEEEEEGEEDAAAASKSSSKSSKSSSKSSSTSTTSSSELSPPKP
TTASSSGSDDFTLFLWEPAVDKKPVARMTGHQQAVNHLAFSPDGRWIASA
SFDNKVKLWNG
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mRNA from alignment at M-pyrifera_M_contig80795:1..936+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig80795.18904.1 ID=mRNA_M-pyrifera_M_contig80795.18904.1|Name=mRNA_M-pyrifera_M_contig80795.18904.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=936bp|location=Sequence derived from alignment at M-pyrifera_M_contig80795:1..936+ (Macrocystis pyrifera P11B4 male)
ATTTGGAGTCCAAAAACAGGAGCTTGTCTGGGGAAACCGCTGGTGGGCCA CAAGGCTTGGATCACTTCTCTGGCTTGGGAGCCGTTGCATCTGTGTGCGC CCAGCCGCCGCCTCGCCTCCTCTTCCCGCGACGGAACGGTACGGGTGTGG GATGCACTCAGGAACGCCTTCCTCTTCTCGCTGGCTGGACACACGGCATC GGTTGAGGTCGTGCTGTGGGGAGGAACGGGACTGCTCTACACCGCCTCCA GGGACAGGAGTGTGAGAGTATGGAGCACGCAGGGCGACGCCAGGGGAAAA GTCGTCAGAATCCTCAACGGACACGCGCACAGAGTCAACACGCTGGCTCT ATCCACCGAACACACGCTCCGAACCGGAGCATTCGCCCTCGGAGGAAAGA CGATGGAAATCCCCAAAACAACCAGCGCAGAAAAAAGCACAAAAACCAGC ACAAAAACCAAAGCAACACCAGAAGAAGAGGAAGAAGGAGAAGAAGATGC AGCAGCAGCATCAAAATCATCATCAAAATCATCAAAATCATCATCAAAAT CATCATCAACATCAACAACATCATCATCAGAACTATCACCACCAAAGCCC ACCACAGCTTCCTCCTCGTCTTCCTCTTCTTCTCCTTCTTTGTTGCCTTC GAAGCGCGTTCGTTCGGAGCGTGGGGACGGTGGTTGGGGGGAGGGTTGGG AGGCGGTGCGGCGTCGAGCGGAGGCGTTGTGGGAGGAGGCCGCTGGGCGT GGTCCGGAGCGGCTGGTGAGTGGGTCTGACGACTTTACGCTGTTTCTGTG GGAGCCAGCCGTGGACAAGAAGCCCGTGGCGCGGATGACTGGCCACCAGC AGGCGGTGAACCACCTGGCGTTTTCCCCCGACGGGCGGTGGATCGCCTCA GCCTCGTTCGACAACAAGGTCAAGCTGTGGAACGGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig80795:1..936+

>mRNA_M-pyrifera_M_contig80795.18904.1 ID=mRNA_M-pyrifera_M_contig80795.18904.1|Name=mRNA_M-pyrifera_M_contig80795.18904.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1566bp|location=Sequence derived from alignment at M-pyrifera_M_contig80795:1..936+ (Macrocystis pyrifera P11B4 male)
ATTTGGAGTCCAAAAACAGGAGCTTGTCTGGGGAAACCGCTGGTGGGCCA
CAAGGCTTGGATCACTTCTCTGGCTTGGGAGCCGTTGCATCTGTGTGCGC
CCAGCCGCCGCCTCGCCTCCTCTTCCCGCGACGGAACGGTACGGGTGTGG
GATGCACTCAGGAACGCCTTCCTCTTCTCGCTGGCTGGACACACGGCATC
GGTTGAGGTCGTGCTGTGGGGAGGAACGGGACTGCTCTACACCGCCTCCA
GGGACAGGAGTGTGAGAGTATGGAGCACGCAGGGCGACGCCAGGGGAAAA
GTCGTCAGAATCCTCAACGGACACGCGCACAGAGTCAACACGCTGGCTCT
ATCCACCGAACACACGCTCCGAACCGGAGCATTCGCCCTCGGAGGAAAGA
CGATGGAAATCCCCAAAACAACCAGCGCAGAAAAAAGCACAAAAACCAGC
ACAAAAACCAAAGCAACACCAGAAGAAGAGGAAGAAGGAGAAGAAGATGC
AGCAGCAGCATCAAAATCATCATCAAAATCATCAAAATCATCATCAAAAT
CATCATCAACATCAACAACATCATCATCAGAACTATCACCACCAAAGCCC
ACCACAGCTTCCTCCTCATTTGGAGTCCAAAAACAGGAGCTTGTCTGGGG
AAACCGCTGGTGGGCCACAAGGCTTGGATCACTTCTCTGGCTTGGGAGCC
GTTGCATCTGTGTGCGCCCAGCCGCCGCCTCGCCTCCTCTTCCCGCGACG
GAACGGTACGGGTGTGGGATGCACTCAGGAACGCCTTCCTCTTCTCGCTG
GCTGGACACACGGCATCGGTTGAGGTCGTGCTGTGGGGAGGAACGGGACT
GCTCTACACCGCCTCCAGGGACAGGAGTGTGAGAGTATGGAGCACGCAGG
GCGACGCCAGGGGAAAAGTCGTCAGAATCCTCAACGGACACGCGCACAGA
GTCAACACGCTGGCTCTATCCACCGAACACACGCTCCGAACCGGAGCATT
CGCCCTCGGAGGAAAGACGATGGAAATCCCCAAAACAACCAGCGCAGAAA
AAAGCACAAAAACCAGCACAAAAACCAAAGCAACACCAGAAGAAGAGGAA
GAAGGAGAAGAAGATGCAGCAGCAGCATCAAAATCATCATCAAAATCATC
AAAATCATCATCAAAATCATCATCAACATCAACAACATCATCATCAGAAC
TATCACCACCAAAGCCCACCACAGCTTCCTCCTCTGGGTCTGACGACTTT
ACGCTGTTTCTGTGGGAGCCAGCCGTGGACAAGAAGCCCGTGGCGCGGAT
GACTGGCCACCAGCAGGCGGTGAACCACCTGGCGTTTTCCCCCGACGGGC
GGTGGATCGCCTCAGCCTCGTTCGACAACAAGGTCAAGCTGTGGAACGGC
TGGGTCTGACGACTTTACGCTGTTTCTGTGGGAGCCAGCCGTGGACAAGA
AGCCCGTGGCGCGGATGACTGGCCACCAGCAGGCGGTGAACCACCTGGCG
TTTTCCCCCGACGGGCGGTGGATCGCCTCAGCCTCGTTCGACAACAAGGT
CAAGCTGTGGAACGGC
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