mRNA_M-pyrifera_M_contig8016.18786.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8016.18786.1
Unique NamemRNA_M-pyrifera_M_contig8016.18786.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A6H5L486_9PHAE (TMP-TENI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L486_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 6.150e-99
Identity = 154/228 (67.54%), Postives = 185/228 (81.14%), Query Frame = 1
Query:    1 GEEIYRDSMVSLSRPVLELITPNGCASSA--DPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAALREN 678
            G E+ +D    L+ P+LELITP+GCASS+  + + L++++Q+AVAGGVSLVQLRDY S  +SKA+LA R+ +A+ GRA FV+NGEPD ARA GADGVHLPER++ RLV LR  G WPR+VGCSVHSVAAAVEAARLGADY+QVGTMF TQSHPGK PEGV +L DV+RQL+ EGL  VLV+GVGGIDASNCG V AAGGDGVAAI CLC   D EG+AR I+  +R +
Sbjct:   89 GNEVAQDDATPLAPPLLELITPDGCASSSFSETSSLVKNIQKAVAGGVSLVQLRDYKSGAKSKADLAVRISTALKGRALFVVNGEPDTARANGADGVHLPERMMDRLVGLRGQGEWPRIVGCSVHSVAAAVEAARLGADYVQVGTMFATQSHPGKTPEGVGMLNDVRRQLQVEGLDVVLVLGVGGIDASNCGDVVAAGGDGVAAIRCLCSSSDAEGQARRIVQDMRNS 316          
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A836CN05_9STRA (Thiamine-phosphate pyrophosphorylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN05_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.110e-52
Identity = 118/222 (53.15%), Postives = 146/222 (65.77%), Query Frame = 1
Query:   37 SRPVLELITPNGCASSADPA-FLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGR-AWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQL-KAEGLGD-----VLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGD--DTEGEAREIMAALR 672
            S PVLELITP+G  S+A P+  L + ++ AV+GGV LVQ+RD  S  ESK  LA +L   +       VLNG  DAA ACGA GVHLPER++  +   R A     VVGCSVHSV AAV AARLGADY+QVGTMF TQ+HPGK PEG  LL  ++  L +A   G+     VL++GVGGI+ +NC +V  AGGDGVAAI  LC  D  D    A+ ++AAL+
Sbjct:   40 SGPVLELITPDG--SAAQPSTHLAQKIRAAVSGGVRLVQIRDTTSSAESKHALATQLLLDLAAEPCCIVLNGGVDAALACGAHGVHLPERLLPEVTRAREALA---VVGCSVHSVEAAVAAARLGADYLQVGTMFATQTHPGKVPEGPQLLAAIRAALNQAHARGELSDKRVLLLGVGGINEANCAQVIQAGGDGVAAIRSLCGADGSDPRAVAQALLAALQ 256          
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A7S3XPQ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPQ6_HETAK)

HSP 1 Score: 150 bits (380), Expect = 1.340e-39
Identity = 97/220 (44.09%), Postives = 122/220 (55.45%), Query Frame = 1
Query:   43 PVLELITPNGCA----SSADPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAID-GRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEG--------VSLLTDVQRQLKAEGLGDVL--VIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREI 657
            P L LITP G      S      ++  +  AV GGVSLVQLRD  +  E  A + +R+   +D   A F++NG+ D A AC ADGVHLPE  VQ  ++      +  V+GCSVHS  AA+ A  + ADYI VGTMF T SHPGK PEG        + +L   Q    + G  + L  V GVGGID  NC +V   GGDGVA IS LC  D  + +A E+
Sbjct:    4 PFLCLITPEGLCTEKYSEEAKRIILSRIGLAVEGGVSLVQLRDKTATREELATMGKRIRDVVDRSSAIFMVNGDLDVAIACKADGVHLPEAQVQDFINSYKNKKFNGVLGCSVHSSEAALRAMEVKADYIVVGTMFKTNSHPGKVPEGPESLKKIKLDMLDHSQNTKDSNGAEEKLPLVCGVGGIDGDNCIEVLKNGGDGVAMISTLCFADRPKDKAEEV 223          
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A2H5YGE0_9BACT (Thiamine-phosphate synthase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5YGE0_9BACT)

HSP 1 Score: 137 bits (345), Expect = 1.570e-35
Identity = 95/220 (43.18%), Postives = 122/220 (55.45%), Query Frame = 1
Query:   25 MVSLSRPV-----LELITPNGCASSADPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAAL 669
            M SL RP      L L+T    A    P  L ++  RAVAGGV++VQLR+ D        LA  L +AI GRA  V+N   D A A GADGVHLPE  +  +   R   G  R+VG SVHSV AAV A   GADYI VG ++PT+SHP     G  LL+ V+R ++      V V+ +GG+ A+   +  AAG  GVA IS +   +D E  AR + +AL
Sbjct:    1 MTSLGRPFFPLPCLMLVTDRSLA----PLPLPQAAARAVAGGVNIVQLREKDLPARDLLALAAALRAAIAGRALLVVNDRADVALAAGADGVHLPEDGLP-VAKARRLVGPARLVGRSVHSVDAAVRAEADGADYIVVGPIYPTRSHPDAPAAGPGLLSQVRRAVR------VPVLAIGGVTAATAAEXLAAGASGVAVISAILGSEDPEAAARGLRSAL 209          
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A2H5YM77_9BACT (Thiamine-phosphate synthase n=1 Tax=bacterium HR25 TaxID=2035420 RepID=A0A2H5YM77_9BACT)

HSP 1 Score: 132 bits (332), Expect = 9.920e-34
Identity = 83/192 (43.23%), Postives = 110/192 (57.29%), Query Frame = 1
Query:  100 LIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAALRE 675
            L   V RAVAGGV +VQLR+ D       +LA  L  A +GR+  V+N   D A A GADG+HLPER +  +   R   G  R+VG SVHS+A AV AA  GADY+ VG+++ T+SHPG  P G+ LL +V  ++         V+ +GGI A    +V  AG  GVA IS +    + E  AR +  ALR+
Sbjct:   14 LTARVARAVAGGVDIVQLRERDMPAGELLSLALELREATEGRSLLVVNDRADVALAAGADGLHLPERGLP-VAAARRLLGEGRLVGRSVHSLAEAVRAAEEGADYLVVGSIYATRSHPGASPAGLGLLREVAARVSLP------VLAIGGITAERVAEVVQAGASGVAVISAVLGQPEAEEAARRLGRALRQ 198          
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A2D8PMH9_9CHLR (Thiamine-phosphate synthase n=5 Tax=root TaxID=1 RepID=A0A2D8PMH9_9CHLR)

HSP 1 Score: 129 bits (323), Expect = 3.390e-32
Identity = 86/215 (40.00%), Postives = 117/215 (54.42%), Query Frame = 1
Query:   31 SLSRPVLELITPNGCASSADPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAALRE 675
            S+ +P L L+T     +  DP  L+  +  AVAGGV +VQLR+ D    +   LAR +  AI  RA  V+N     A A GA GV L E  +   +  R   G   ++G SVHSVA A EA   GAD++ VGTM+ T+SHPG  P G  L+  + R      L D+ +IG+GGI   N G+V AAG  GVA I+ +    D E  AR++  A+ +
Sbjct:    4 SVLQPCLCLVTDR---TLXDPEDLVHRIAXAVAGGVDMVQLREKDLPGGTLLELARTVKEAIADRALLVVNERVXVALAAGASGVQLGEEALPAAI-ARDILGPDSLIGRSVHSVAGADEAVAQGADFLVVGTMYSTRSHPGAXPAGPELIRQISR------LCDIPLIGIGGIXEENLGEVLAAGAXGVAVITRILDAXDPEXAARKLKQAMSQ 208          
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A2E7PCV5_9CHLR (Thiamine-phosphate synthase n=6 Tax=Chloroflexi TaxID=200795 RepID=A0A2E7PCV5_9CHLR)

HSP 1 Score: 124 bits (311), Expect = 1.260e-30
Identity = 80/213 (37.56%), Postives = 118/213 (55.40%), Query Frame = 1
Query:   31 SLSRPVLELITPNGCASSADPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAAL 669
            +L +P L L+T  G A       L+  V +AVAGGV LVQLRD +       +LA +L  AIDGRA  ++N   D A A GA GV + E  +  +  +R+  G    +G SVHS +AA+ A + GAD++ VGTM+ + SHPG+EP G  L+ D+    +        +IG+GG+   N G++  AG  GVA I+ +    D +  A ++  +L
Sbjct:    4 ALPKPCLCLVTDPGIAQK----DLVERVAQAVAGGVDLVQLRDKEMPGGQLLDLAAQLLKAIDGRAKLLVNERADVAHAAGAHGVQIGEEGLP-VSAVRNIVGDHSFIGRSVHSSSAALAAEKEGADFLVVGTMYASSSHPGEEPAGPGLMRDISGTCRLP------LIGIGGVTPENAGELVEAGASGVAVITNILAAPDPKAAAAKLKQSL 205          
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A7X1PC47_9CHLR (Thiamine-phosphate synthase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7X1PC47_9CHLR)

HSP 1 Score: 124 bits (312), Expect = 1.290e-30
Identity = 82/212 (38.68%), Postives = 116/212 (54.72%), Query Frame = 1
Query:   43 PVLELITPNGCASSADPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPER-IVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAALRE 675
            PVL  +       ++D    +R    AVAGGVS+VQLRD+D       ++ARRL +   G+A  V+N   D A A  +DG+ +PE+ +  R+V  RS  G   V+G SVH V AA  AAR GA+Y+  GT++ + SHP  EP G  L++ + +         + V+ +GGI   N   V  AG DGVA IS +   DD +  A  + AAL+E
Sbjct:   13 PVLCFVVGKSDVKNSDIEATVRD---AVAGGVSMVQLRDHDVPAGELLDIARRLKAITRGKALLVINDRVDVAEAVESDGIQIPEQGLPTRIV--RSIMGRYVVIGRSVHGVEAAQNAAREGAEYVIAGTIYKSASHPDAEPAGPELISAITKD------SFLPVLAIGGITVDNIEDVVKAGADGVAVISAIAQADDPKAAAEALTAALKE 213          
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A6L7Q5U4_9CHLR (Thiamine-phosphate synthase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7Q5U4_9CHLR)

HSP 1 Score: 125 bits (313), Expect = 1.350e-30
Identity = 94/250 (37.60%), Postives = 132/250 (52.80%), Query Frame = 1
Query:   31 SLSRPVLELITPNGCASSADPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAALRENLLR*LLHAAAGHPLVRCGAAAAFAEYSQIPVKRD 780
            +L  P L L+T     +   P  L + V  AVAGGV LVQLRD ++        A  L   I GRA  ++N   D A A GADGV L E  +  + + R+  G   V+G SVHSV  A+ AA  GAD++ VGTMF T+SHPG+EP G  LL+    ++ + G+  + ++G+GGI A N  +V A+G  G A I+ +   +D E  AR + +A+        L  AAG+P +   +  A A      V  D
Sbjct:    4 TLPYPCLCLVTDR---TVCPPDELPQRVAAAVAGGVDLVQLRDKEAPGGVLLEQAWDLREIIQGRALLLVNERADVALAAGADGVQLGEMALP-VDEARTILGPGAVIGRSVHSVPGALHAAVNGADFLLVGTMFATRSHPGEEPSGPGLLS----RIASAGVA-IPMLGIGGITAENVAEVMASGASGAAVITGILASEDPETAARRLKSAM--------LDTAAGNPSIEYESQPAAAHRLAAQVTGD 236          
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Match: A0A2N0KGQ3_9CHLR (Thiamine-phosphate synthase n=1 Tax=SAR202 cluster bacterium Casp-Chloro-G3 TaxID=1926605 RepID=A0A2N0KGQ3_9CHLR)

HSP 1 Score: 124 bits (310), Expect = 1.580e-30
Identity = 75/194 (38.66%), Postives = 108/194 (55.67%), Query Frame = 1
Query:   88 DPAFLIRSVQRAVAGGVSLVQLRDYDSDYESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPERIVQRLVDLRSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGVSLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCVGDDTEGEAREIMAAL 669
            D A L+  +  AV+GGV LVQLR+ D        LA+R+  AI   A  ++N   D A A  A+GV L E  +   ++ R   G   ++G SVHS+  A++AA  GAD++ VGTMF ++SHPG+EP G +L+  +  +          + G+GGIDASN G V  AG  GVA I+ +      +  AR+I  A+
Sbjct:   11 DEATLVARIADAVSGGVDLVQLREKDLPGGPLLELAQRIREAISDSAMLIINERVDVAAAIAANGVQLGEEALPT-IEARKILGHDTLIGRSVHSLEGALQAAEQGADFLLVGTMFASRSHPGEEPAGPALVRQITVRCSLP------LFGIGGIDASNAGHVMDAGASGVAVITSILASPSPKEAARQIKRAI 197          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8016.18786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L486_9PHAE6.150e-9967.54TMP-TENI domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CN05_9STRA1.110e-5253.15Thiamine-phosphate pyrophosphorylase n=1 Tax=Tribo... [more]
A0A7S3XPQ6_HETAK1.340e-3944.09Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2H5YGE0_9BACT1.570e-3543.18Thiamine-phosphate synthase n=2 Tax=Bacteria TaxID... [more]
A0A2H5YM77_9BACT9.920e-3443.23Thiamine-phosphate synthase n=1 Tax=bacterium HR25... [more]
A0A2D8PMH9_9CHLR3.390e-3240.00Thiamine-phosphate synthase n=5 Tax=root TaxID=1 R... [more]
A0A2E7PCV5_9CHLR1.260e-3037.56Thiamine-phosphate synthase n=6 Tax=Chloroflexi Ta... [more]
A0A7X1PC47_9CHLR1.290e-3038.68Thiamine-phosphate synthase n=1 Tax=Dehalococcoidi... [more]
A0A6L7Q5U4_9CHLR1.350e-3037.60Thiamine-phosphate synthase n=1 Tax=Chloroflexi ba... [more]
A0A2N0KGQ3_9CHLR1.580e-3038.66Thiamine-phosphate synthase n=1 Tax=SAR202 cluster... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8016contigM-pyrifera_M_contig8016:2279..5282 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score299.3
Seed ortholog evalue1.5e-78
Seed eggNOG ortholog2880.D7FV85
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Thiamine monophosphate synthase
EggNOG OGs2S9Y2@2759,COG0352@1
Ec32 ortholog descriptionAldolase-type TIM barrel
Ec32 orthologEc-14_000170.1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size965
Cds size666
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8016.18786.1prot_M-pyrifera_M_contig8016.18786.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8016 2303..5007 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816706.9538586-UTR-M-pyrifera_M_contig8016:2278..23021622816706.9538586-UTR-M-pyrifera_M_contig8016:2278..2302Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8016 2279..2302 +
1692278131.9211354-UTR-M-pyrifera_M_contig8016:2278..23021692278131.9211354-UTR-M-pyrifera_M_contig8016:2278..2302Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8016 2279..2302 +
1622816706.999994-UTR-M-pyrifera_M_contig8016:5007..52821622816706.999994-UTR-M-pyrifera_M_contig8016:5007..5282Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8016 5008..5282 +
1692278131.9608383-UTR-M-pyrifera_M_contig8016:5007..52821692278131.9608383-UTR-M-pyrifera_M_contig8016:5007..5282Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8016 5008..5282 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816706.966399-CDS-M-pyrifera_M_contig8016:2302..26981622816706.966399-CDS-M-pyrifera_M_contig8016:2302..2698Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8016 2303..2698 +
1692278131.9373147-CDS-M-pyrifera_M_contig8016:2302..26981692278131.9373147-CDS-M-pyrifera_M_contig8016:2302..2698Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8016 2303..2698 +
1622816706.9817853-CDS-M-pyrifera_M_contig8016:4737..50071622816706.9817853-CDS-M-pyrifera_M_contig8016:4737..5007Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8016 4738..5007 +
1692278131.948171-CDS-M-pyrifera_M_contig8016:4737..50071692278131.948171-CDS-M-pyrifera_M_contig8016:4737..5007Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8016 4738..5007 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8016.18786.1

>prot_M-pyrifera_M_contig8016.18786.1 ID=prot_M-pyrifera_M_contig8016.18786.1|Name=mRNA_M-pyrifera_M_contig8016.18786.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=222bp
MVSLSRPVLELITPNGCASSADPAFLIRSVQRAVAGGVSLVQLRDYDSDY
ESKANLARRLHSAIDGRAWFVLNGEPDAARACGADGVHLPERIVQRLVDL
RSAGGWPRVVGCSVHSVAAAVEAARLGADYIQVGTMFPTQSHPGKEPEGV
SLLTDVQRQLKAEGLGDVLVIGVGGIDASNCGKVAAAGGDGVAAISCLCV
GDDTEGEAREIMAALRENLLR*
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mRNA from alignment at M-pyrifera_M_contig8016:2279..5282+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8016.18786.1 ID=mRNA_M-pyrifera_M_contig8016.18786.1|Name=mRNA_M-pyrifera_M_contig8016.18786.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3004bp|location=Sequence derived from alignment at M-pyrifera_M_contig8016:2279..5282+ (Macrocystis pyrifera P11B4 male)
GGCGAGGAAATATATCGAGATTCTATGGTTTCCCTCTCGCGTCCAGTGCT GGAGCTTATCACGCCGAACGGCTGTGCATCGTCTGCCGACCCAGCGTTCC TCATACGCAGCGTTCAGAGGGCCGTGGCCGGCGGTGTTTCTCTAGTACAG CTGCGAGACTACGATTCCGACTATGAGAGCAAGGCCAACCTGGCCCGTCG TCTTCATTCCGCCATAGATGGCCGCGCATGGTTCGTTTTGAACGGCGAGC CCGACGCTGCTCGGGCTTGCGGTGCTGACGGGGTTCACCTTCCCGAGCGA ATAGTGCAACGTCTTGTGGATCTCCGTAGCGCTGGAGGGTGGCCGCGAGT TGTGGGATGCTCGGTCCACTCCGTTGCAGCGGCGGTAGAGGCTGCAAGAC TGGGTGCAGACTATATTCAGGTACGAAACTCACGAACTCCTGATATCTCG TACCTATACCTGGTACTTGTACGACCTGAGTCAGCCAAAAAATGGATAGA CCGTCGTAGGGTGTTTTACTTATAGGGTGTACGTACGTATCGTACCTTGT ACCTGATGCGCGTTCCGCCTCGGCCTGTTTCAATACTTGCTGACCGCTGT TGTTGTTTGTTGTTGTAGAAGGGTGGTTTTGGCGCGCGTGATGTTTTTTT GTGCCACTGGTACTGAAACTACTGCTGCAACGAGCTTGGTGTGACAATGT TGAAAATCGCACCCCCCACCTCGCGTCTCCTATCTCCTTAACGTTAAAAT ATTTTATGTAATATGTCGATACGCGGAAGCACGACCGATCGTTCCGACTG TTATCACGGTAGATTCACTGGCCGCCTGACCGTAAGACCAAGCTTCTGCA CGCACAGCTATTAATAGTACGATTCGACTCTTCGCTCTCCCGTTGAATCC AGTCGTACACATCCGTTTCTTCCGCAATACATATACTCTGCTTATGGAAG CATGCCAGGTTGGAGAGACTCGGGGTCTTGACAGGGTGGTGGTACATGAT ATTATGATAGTATAACTCAGTGCTGTTGTTATTGTTGTTGGTACTTATTA ATAGTCTTGTAATACAATGCGCCCGTTCATGATCGACTTCCCTGTTGGCA CCAAAGATGTCGGGAAATGGCACTTTCACCCCTCGACAGACTTCAACTTT CCCTTGACATGCCTTGACTGACAACACACTACTACCTGGTATGTTTGAGA GTGGAACACGGTACAATATAGTGTTGTTGTTGTTGTTGTTGTTGTTGTTG TTTGTTTTGTAATGTGTTTCGCCCGTTCATGGTCGACTCCCGTGTTGGCG ATGGTAGTTGGCAGACGGCCACTGGAAAAACTTAGGACACTGACGCCATC CCCTGTTATCACGTTGGTCTGGAACTGGAAAAACGTAGGACACTGGCGCC GTATGAATGTATTGCATGGAGTGCTGTGCGTGCGCTCTTGGAAGCATACC GTTTATTTCTTCCCGAGTTCGTAGTAGTTAGTTACTGGTGTTGAACATTG TGGCTCCGATGTGTGCAACTTCTTGGAGTTTTATGTTTACATTCTTGAAG GCATGTCGTTAATCTTTTCGAGAAATTGTAGGTAAGGACTATTATGGGCT TCGAGCCGTGTCGGAGCGTGGGTAATTATTCCGTATGAGTTGAGTGTGGT AGGCTTTGATCTTGGAGCATCGTTGGCTTCGTGAAGCATTGAACGAGAAT TATCGTGCCTTGACGTCGTGGGGCATAGACACTGACAATGTGTTATGACC TGTCGTGGAGATGTCGTTAGTATTCCCGAGTACTCGTTGAGGTATATCGT GTGTGAAATATAATGGGGACTTGTAGGAGTGTGGGCTTCGGCGTCTTGAA TACACAATGTGCTATACTGTAGATTAATTTGACTTACTATTGTTTTTTCG GCGCGCTGTCTTCAATTACGGTGTTGAGGCGTTACTATATTGTTAGAACG CTTCCCGCACGGCGCTATCAGCTCTCAGGTGCTATCATCGCTGTCAGGGT CTTGGACTCGCTTCAATGGTGCGGGCGGCGTCAGCCGCAGAACCTTCTAT CACTGCATACTCGTACTATATATTTAATTTTATAAATATAAACTACTACA GTATCTGCTGTGCTGCTGCTGTTTGTTGTCAAATTCAGGTACCTGCTACG TTTTTCTTCGTGCCATGCCTGGCCATGTCGTTGTTTTTTTTCTGCTATCT GACACTGCGTGAAAGGGGAATAACCATGCCTGTACTCCCGAACGCTTTTG CCAAGTCATAGATGAGAAAAATGGCTATCCCCGTTGGAATCATACTTTTT TTTGTCGCTTCGACCTTCTTGTTTGATCTCGTTTTGTTCACGAATTGAGT GCGGAGAAAAATCACGTTGACACATTATGCAGACGAAGAATTACAAGAAA AACACGACCACCCTGGTCTCCGATCGACGCACGCGCATTGCCATCATTTC CACCCTCAGGTGGGCACCATGTTCCCCACGCAGTCGCACCCGGGGAAAGA GCCCGAAGGGGTGAGCTTGCTGACCGACGTGCAAAGGCAGCTCAAAGCGG AGGGTCTCGGCGACGTGTTGGTGATCGGTGTGGGAGGAATCGATGCCTCG AACTGCGGAAAGGTTGCGGCGGCTGGTGGCGACGGTGTGGCGGCCATCAG TTGTTTGTGTGTGGGCGACGATACGGAAGGAGAGGCTCGAGAAATCATGG CCGCTTTGAGGGAAAACTTGCTACGGTAGCTGCTGCATGCCGCGGCCGGT CATCCGTTAGTGAGATGTGGCGCTGCTGCTGCATTCGCTGAATACTCTCA AATCCCAGTTAAGCGCGATTTTCGCAGTTTATGTACGGTATGGGATGGGT GGCATGTGCTGCGATCAGCGACGGCCGTAACCCAACGGACTTTGGTACAG CAGGACTCACGTGAAAACATTAAAGTTGTATACAAAAAATGCGTGCGGCG CATGCGCTCGTCGACTGACACCCGCTTGGAGCTTTAATTATTATCCTCAC GTCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8016:2279..5282+

>mRNA_M-pyrifera_M_contig8016.18786.1 ID=mRNA_M-pyrifera_M_contig8016.18786.1|Name=mRNA_M-pyrifera_M_contig8016.18786.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1332bp|location=Sequence derived from alignment at M-pyrifera_M_contig8016:2279..5282+ (Macrocystis pyrifera P11B4 male)
ATGGTTTCCCTCTCGCGTCCAGTGCTGGAGCTTATCACGCCGAACGGCTG
TGCATCGTCTGCCGACCCAGCGTTCCTCATACGCAGCGTTCAGAGGGCCG
TGGCCGGCGGTGTTTCTCTAGTACAGCTGCGAGACTACGATTCCGACTAT
GAGAGCAAGGCCAACCTGGCCCGTCGTCTTCATTCCGCCATAGATGGCCG
CGCATGGTTCGTTTTGAACGGCGAGCCCGACGCTGCTCGGGCTTGCGGTG
CTGACGGGGTTCACCTTCCCGAGCGAATAGTGCAACGTCTTGTGGATCTC
CGTAGCGCTGGAGGGTGGCCGCGAGTTGTGGGATGCTCGGTCCACTCCGT
TGCAGCGGCGGTAGAGGCTGCAAGACTGGGTGCAGACTATATTCAGATGG
TTTCCCTCTCGCGTCCAGTGCTGGAGCTTATCACGCCGAACGGCTGTGCA
TCGTCTGCCGACCCAGCGTTCCTCATACGCAGCGTTCAGAGGGCCGTGGC
CGGCGGTGTTTCTCTAGTACAGCTGCGAGACTACGATTCCGACTATGAGA
GCAAGGCCAACCTGGCCCGTCGTCTTCATTCCGCCATAGATGGCCGCGCA
TGGTTCGTTTTGAACGGCGAGCCCGACGCTGCTCGGGCTTGCGGTGCTGA
CGGGGTTCACCTTCCCGAGCGAATAGTGCAACGTCTTGTGGATCTCCGTA
GCGCTGGAGGGTGGCCGCGAGTTGTGGGATGCTCGGTCCACTCCGTTGCA
GCGGCGGTAGAGGCTGCAAGACTGGGTGCAGACTATATTCAGGTGGGCAC
CATGTTCCCCACGCAGTCGCACCCGGGGAAAGAGCCCGAAGGGGTGAGCT
TGCTGACCGACGTGCAAAGGCAGCTCAAAGCGGAGGGTCTCGGCGACGTG
TTGGTGATCGGTGTGGGAGGAATCGATGCCTCGAACTGCGGAAAGGTTGC
GGCGGCTGGTGGCGACGGTGTGGCGGCCATCAGTTGTTTGTGTGTGGGCG
ACGATACGGAAGGAGAGGCTCGAGAAATCATGGCCGCTTTGAGGGAAAAC
TTGCTACGGTAGGTGGGCACCATGTTCCCCACGCAGTCGCACCCGGGGAA
AGAGCCCGAAGGGGTGAGCTTGCTGACCGACGTGCAAAGGCAGCTCAAAG
CGGAGGGTCTCGGCGACGTGTTGGTGATCGGTGTGGGAGGAATCGATGCC
TCGAACTGCGGAAAGGTTGCGGCGGCTGGTGGCGACGGTGTGGCGGCCAT
CAGTTGTTTGTGTGTGGGCGACGATACGGAAGGAGAGGCTCGAGAAATCA
TGGCCGCTTTGAGGGAAAACTTGCTACGGTAG
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