mRNA_M-pyrifera_M_contig80133.18781.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig80133.18781.1
Unique NamemRNA_M-pyrifera_M_contig80133.18781.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig80133.18781.1 vs. uniprot
Match: A0A2E2BD81_9GAMM (Uncharacterized protein n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A2E2BD81_9GAMM)

HSP 1 Score: 298 bits (762), Expect = 9.880e-92
Identity = 142/278 (51.08%), Postives = 191/278 (68.71%), Query Frame = 1
Query:   31 WFYMSGKSRLNPVAGVMTSINEAPASAFAARTILGLGNEVSALDGISTLDAFYTGFGPLRGYITREFKRENIFMLGGNYIFSGAQGGFLDQLIVRGEVSVTPDKQFTDLSLSRNFIKETEVVSALIVEKYHNFSLELPAAYMVAQWMHRTESDLFGRHLSGNEN-RGFQSYIDPVTGAIDPSAQVAGTAQPTGQSSADYVAFAIQQPFPDLIWRADFTVLADVDGGFLLQPGVRYRPSAAWQWDVYANIIAGGGSDNDNIMQSLDHNDEVFMRVTYAF 861
            W  ++G  RL+P+  +   +NE PA  +A R + G G+E + +D   T++ F++ FG  R + TREF REN+F++GGNY+ +     F DQLI+RGEVS T DK+ TDL LS +  ++ ++VSALI EKYH  S   PA YMVAQWMHRT +D+FGR L+GN   + F +YID  TG  +  ++    A+P G  +A+YV FA QQPFPDL+WR D  VL DV GG+L+QPGVRYRP+A WQWD+YAN+I   G DND I ++LD+ DEVF+R TY F
Sbjct:  534 WHDVAG-GRLDPLKALRVVVNEWPADWWATREMFGFGDEYTVVDAQRTIEGFHSSFGGFRAWATREFARENVFVIGGNYVVNADADSFFDQLIIRGEVSYTHDKKLTDLGLSFDPTEKDDIVSALIFEKYHRISSAFPATYMVAQWMHRTATDMFGRDLAGNGGAKDFGAYIDKTTGRFNAKSRTFNGAKPVGNDNANYVVFAFQQPFPDLVWRFDMAVLVDVAGGYLVQPGVRYRPAANWQWDLYANVIESPGGDNDTITETLDYADEVFIRATYFF 810          
BLAST of mRNA_M-pyrifera_M_contig80133.18781.1 vs. uniprot
Match: A0A2N3EHW8_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3EHW8_9PROT)

HSP 1 Score: 242 bits (618), Expect = 2.510e-72
Identity = 132/286 (46.15%), Postives = 181/286 (63.29%), Query Frame = 1
Query:    4 STATASAAEWFYMSGKSRLNPVAGVMTSINEAPASAFAARTILGLGNEVSALDGISTLDAFYTGFGPLRGYITREFKRENIFMLGGNYIFSGAQGGFLDQLIVRGEVSVTPDKQFTDLSLSRNFIKETEVVSALIVEKYHNFSLELPAAYMVAQWMHRTESDLFGRHLSGNENRGFQSYIDPVTGAIDPSAQVAGTAQPTGQSSADYVAFAIQQPFPDLIWRADFTVLADVDGGFLLQPGVRYRPSAAWQWDVYANIIAGGGSDNDNIMQSLDHNDEVFMRVTYAF 861
            ST   SAAEWF  +G +RLN   G   ++NE PA+A     +L      +     + LD F+    PLRG+ITR + RENI  LG NYI       F DQL++R E++ TPDK+FT   LSR+ I+E E V++L+ EKYH F+ E PA +MV Q++H++ESDLFGRHLSG    G     D  TG             P+G+SS + VAFA+QQPFP+LIWRADF+VL D++GG L+QPG++++P+ AW  +V+ANI    G  ND+I+ ++D  DE+  R+TY F
Sbjct:  346 STGVYSAAEWFTYAGMARLNGFTGFNAAVNEFPATA-----LLNAAPVPNQAFAAAELDYFFQ-LSPLRGHITRIYPRENILGLGANYIVKAGPDSFFDQLVIRSELTYTPDKKFTSPDLSRSLIEEDEYVASLVFEKYHRFTQEFPATFMVLQYLHKSESDLFGRHLSGMGATG-----DRTTGL------------PSGESSFNAVAFALQQPFPNLIWRADFSVLYDINGGALIQPGLKWKPNEAWTAEVFANIALSDGG-NDDIIDTIDWADELAFRITYQF 607          
BLAST of mRNA_M-pyrifera_M_contig80133.18781.1 vs. uniprot
Match: A0A382S115_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382S115_9ZZZZ)

HSP 1 Score: 227 bits (579), Expect = 3.160e-71
Identity = 113/228 (49.56%), Postives = 150/228 (65.79%), Query Frame = 1
Query:  178 DAFYTGFGPLRGYITREFKRENIFMLGGNYIFSGAQGGFLDQLIVRGEVSVTPDKQFTDLSLSRNFIKETEVVSALIVEKYHNFSLELPAAYMVAQWMHRTESDLFGRHLSGNENRGFQSYIDPVTGAIDPSAQVAGTAQPTGQSSADYVAFAIQQPFPDLIWRADFTVLADVDGGFLLQPGVRYRPSAAWQWDVYANIIAGGGSDNDNIMQSLDHNDEVFMRVTYAF 861
            D    G GPL+G+ITREF +E IF +G NY+F+GA    LDQLI+R E ++  D++FT + LSRN+I+E E VS + +EKYH F+   PA Y V QWMH++ESD+ GRH+SG +N G                       P G+ S + VAFA+QQPFP LIWRAD  VL D +GGFL+QPGVR+RPS+  Q D+YANII   G  ND++MQ+ +  DE+F R+T+ F
Sbjct:    4 DPLAGGLGPLKGHITREFHKEEIFGVGFNYVFNGAPNSLLDQLILRVEATMALDRKFTHIGLSRNYIEEDEFVSNVSLEKYHRFTANFPATYFVLQWMHKSESDMMGRHVSGFDNDGV----------------------PKGEDSFNAVAFALQQPFPGLIWRADLAVLYDTNGGFLIQPGVRWRPSSNVQLDIYANIIGSDGG-NDDVMQTFEDMDEIFGRLTFYF 208          
BLAST of mRNA_M-pyrifera_M_contig80133.18781.1 vs. uniprot
Match: A0A2E1EIF7_9HYPH (Uncharacterized protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2E1EIF7_9HYPH)

HSP 1 Score: 237 bits (604), Expect = 1.790e-70
Identity = 130/286 (45.45%), Postives = 177/286 (61.89%), Query Frame = 1
Query:    7 TATASAAEWFYMSGKSRLNPVAGVMTSINE-APASAFAARTILGLGNEVSALDGISTLDAFYTGFGPLRGYITREFKRENIFMLGGNYIFSGAQGGFLDQLIVRGEVSVTPDKQFTDLSLSRNFIKETEVVSALIVEKYHNFSLELPAAYMVAQWMHRTESDLFGRHLSGNENRGFQSYIDPVTGAIDPSAQVAGTAQPTGQSSADYVAFAIQQPFPDLIWRADFTVLADVDGGFLLQPGVRYRPSAAWQWDVYANIIAGGGSDNDNIMQSLDHNDEVFMRVTYAF 861
            T   SA EWF  +G +RLN  AG  T+I E  PA+       LG     +     + LD F+   GPLRG+I R + RENIF LG NY+ +   G F DQL++R E + TPDK FT   LSR+ I E E V++L+ EKYH FS E PA +MV Q++ ++ESD+FGRHLSG    G               A+ +G   P G+ S + +AFA+QQPFP+LIWRADF+VL DV+GG L+QPG++++P+ AW  +V+AN+    G  ND+I+ ++D  DEV  R+TY F
Sbjct:  322 TGVYSAQEWFTYAGMARLNGFAGFNTAIREFQPATGG-----LGAAEVPTQALAAAELDFFFQALGPLRGHIARVYPRENIFGLGANYVVNAGAGSFFDQLVIRSEFTWTPDKTFTSPDLSRSHIVEDEYVASLVFEKYHRFSQEFPATFMVLQYLFKSESDMFGRHLSGMGATG---------------ARTSGL--PEGEDSFNAIAFAVQQPFPNLIWRADFSVLYDVNGGALIQPGLKWKPNEAWTAEVFANVTLSDGG-NDDIIDTIDWADEVTFRITYQF 584          
BLAST of mRNA_M-pyrifera_M_contig80133.18781.1 vs. uniprot
Match: A7HS96_PARL1 (Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) TaxID=402881 RepID=A7HS96_PARL1)

HSP 1 Score: 236 bits (601), Expect = 5.890e-70
Identity = 130/285 (45.61%), Postives = 179/285 (62.81%), Query Frame = 1
Query:    7 TATASAAEWFYMSGKSRLNPVAGVMTSINEAPASAFAARTILGLGNEVSALDGISTLDAFYTGFGPLRGYITREFKRENIFMLGGNYIFSGAQGGFLDQLIVRGEVSVTPDKQFTDLSLSRNFIKETEVVSALIVEKYHNFSLELPAAYMVAQWMHRTESDLFGRHLSGNENRGFQSYIDPVTGAIDPSAQVAGTAQPTGQSSADYVAFAIQQPFPDLIWRADFTVLADVDGGFLLQPGVRYRPSAAWQWDVYANIIAGGGSDNDNIMQSLDHNDEVFMRVTYAF 861
            T   SA EWF  +G +RLN   G  T+INE PA+A     +LG     +     S LD F+    PLRG+I R + RENIF LG NY+ +     F DQL++R E + TPDK FT   LS++FI+E E V++L+ EKYH FS E PA +MV Q+++++ESD+FGRHLSG    G               A+ +G   P G++S + VAFA+QQPFP+LIWRADF+VL DV GG L+QPG++++P+  W  +V+ANI    G  ND+I+ ++D  DE+  R+TY F
Sbjct:  332 TGVYSAQEWFTYAGMARLNGFTGFNTAINEFPATA-----LLGAAAVPNQTLAASELDLFFQ-LSPLRGHIARTYHRENIFGLGANYVVNAGPESFFDQLVIRSEFTYTPDKIFTSPDLSQSFIEEDEYVASLVFEKYHRFSQEFPATFMVLQYLYKSESDMFGRHLSGMGATG---------------ARTSGL--PEGENSFNAVAFALQQPFPNLIWRADFSVLYDVRGGALVQPGLKWKPNEQWTAEVFANITMSDGG-NDDIVDTIDWADELTFRITYQF 592          
BLAST of mRNA_M-pyrifera_M_contig80133.18781.1 vs. uniprot
Match: A0A7C7SLV2_9GAMM (DUF1302 family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7SLV2_9GAMM)

HSP 1 Score: 232 bits (592), Expect = 1.330e-68
Identity = 119/278 (42.81%), Postives = 170/278 (61.15%), Query Frame = 1
Query:   28 EWFYMSGKSRLNPVAGVMTSINEAPASAFAARTILGLGNEVSALDGISTLDAFYTGFGPLRGYITREFKRENIFMLGGNYIFSGAQGGFLDQLIVRGEVSVTPDKQFTDLSLSRNFIKETEVVSALIVEKYHNFSLELPAAYMVAQWMHRTESDLFGRHLSGNENRGFQSYIDPVTGAIDPSAQVAGTAQPTGQSSADYVAFAIQQPFPDLIWRADFTVLADVDGGFLLQPGVRYRPSAAWQWDVYANIIAGGGSDNDNIMQSLDHNDEVFMRVTYAF 861
            EWF+ +G+SRL+ +  +  SI+E PA+A     ++    + +A+    TLD F+   GPL+G++ RE+K E+I   G +Y+F+       DQLI++ E S   D+ FT  +L+R+FI E E+++ + +EKYH FS   PA Y + +WMH+TESD  GRH+SG +N G                       P GQ S D   FA QQPFP+L+WRADFTVL + +GGFL QPGV++RPS  +Q D+YANII   G DND+ M++ +  DEVF R T+ F
Sbjct:  346 EWFHFAGRSRLDGMEALNRSIDEFPATALLGAAVVP-NRQFAAI----TLDTFFAALGPLKGHVAREYKDEDILGFGLSYVFTAEPDTLFDQLILKVEASYAMDRYFTSPTLTRDFIVENELITNVTIEKYHRFSDSFPATYFILEWMHKTESDFLGRHVSGFDNDGI----------------------PKGQDSYDAFVFAFQQPFPNLVWRADFTVLYEKEGGFLFQPGVKWRPSGKFQLDLYANIIGSDG-DNDDAMETFEDQDEVFARATWFF 595          
BLAST of mRNA_M-pyrifera_M_contig80133.18781.1 vs. uniprot
Match: A0A381T9X7_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381T9X7_9ZZZZ)

HSP 1 Score: 223 bits (568), Expect = 4.780e-65
Identity = 128/292 (43.84%), Postives = 174/292 (59.59%), Query Frame = 1
Query:   28 EWFYMSGKSRLNPVAGVMTSINEAPAS-AFAARTILGLGNEVSALDGISTL--------DAFYT----GFGPLRGYITREFKRENIFMLGGNYIFSGAQGGFLDQLIVRGEVSVTPDKQFTDLSLSRNFIKETEVVSALIVEKYHNFSLELPAAYMVAQWMHRTESDLFGRHLSG-NENRGFQSYIDPVTGAIDPSAQVAGTAQPTGQSSADYVAFAIQQPFPDLIWRADFTVLADVDGGFLLQPGVRYRPSAAWQWDVYANIIAGGGSDNDNIMQSLDHNDEVFMRVTYAF 861
            EW + +G +RL+ + G+  S+ E PA+ A  A  I     E+ A  G+  L        DAF+     G GPL+G+I RE+ +E IF +G  Y+F+G     LDQLI R E ++  D++FT++SLSR++I+E E+V+ + +EKYH FS   PA Y++ QWMH++ESD  GRHLSG    RG                       P G S+ +  AFA+QQPFP LIWRAD  VL D  GG+L+QPGVR+RP    Q DVYANII   G DND++M++ +  DEVF R TY F
Sbjct:  333 EWLHYAGLARLHGIDGLTASVLEFPAAQALGAFPIT---PEICASIGVPDLTTCTVLELDAFFDPLSGGLGPLKGHIAREYHKEEIFGVGMTYVFNGEPDTLLDQLIFRVEATMAMDRKFTNISLSRDYIEEDELVTNVSLEKYHRFSANFPATYLIFQWMHKSESDFLGRHLSGMGSERG----------------------PPKGDSNFNAFAFALQQPFPGLIWRADLAVLYDAKGGYLIQPGVRWRPRDNIQLDVYANIIGSDG-DNDDVMETFEDMDEVFARFTYYF 598          
BLAST of mRNA_M-pyrifera_M_contig80133.18781.1 vs. uniprot
Match: A0A2N5Y045_9GAMM (Uncharacterized protein n=2 Tax=Halieaceae TaxID=1706372 RepID=A0A2N5Y045_9GAMM)

HSP 1 Score: 221 bits (562), Expect = 5.840e-64
Identity = 130/292 (44.52%), Postives = 171/292 (58.56%), Query Frame = 1
Query:    1 DSTATASAAEWFYMSGKSRLNPVAGVMTSINEAP-ASAFAARTILGLGNEVSALDGISTLDAFYTGFGPLRGYITREFKRENIFMLGGNYIFSGAQGGFLDQLIVRGEVSVTPDKQFTDLSLSRNFIKETEVVSALIVEKYHNFSLELPAAYMVAQWMHRTESDLFGRHLSGNENRGFQSYIDPVTGAIDPSAQVAGTAQPTGQSSADYVAFAIQQPFPDLIWRADFTVLADVDGGFLLQPGVRYRPSAAWQWDVYANIIAGGG----SDNDNIMQSLDHNDEVFMRVTYAF 861
            DST   SA EWF+ +G +RL+ + G+  SI E P A A  A  +    NE    D    LD F++  G LRG++ RE+ RE++F LG  Y F+G  G FLDQLI   E+    D+ FT+ SLSR  I E E++++L++EKYH FS E PA Y V QWMHRTESD+FGRHLSG            + G  D +AQ A T       SA+YVA AIQQP P L WR DF++L D +G  LLQP VR+RP   W  + + N I   G    ++N N + +    DE  +RV+Y+F
Sbjct:  355 DSTGVLSAREWFHYAGLARLDGIEGLNASIAEFPGAQALGAYLV---DNE---FDAGQELDLFFSSAGGLRGHLAREYHRESVFGLGLGYTFNGEPGSFLDQLIANLEIQYANDRTFTNPSLSREHIVEDEIITSLVLEKYHRFSREFPATYFVFQWMHRTESDIFGRHLSG------------MGGTADRAAQNART-----PDSANYVAVAIQQPSPTLKWRFDFSMLYDTEGAMLLQPAVRWRPGGDWGVEAFFNHIIEDGFTSRTENYNALSTAGWADEFTLRVSYSF 623          
BLAST of mRNA_M-pyrifera_M_contig80133.18781.1 vs. uniprot
Match: A0A4V3F581_9GAMM (Uncharacterized protein n=1 Tax=Panacagrimonas perspica TaxID=381431 RepID=A0A4V3F581_9GAMM)

HSP 1 Score: 220 bits (560), Expect = 1.400e-63
Identity = 125/289 (43.25%), Postives = 168/289 (58.13%), Query Frame = 1
Query:    1 DSTATASAAEWFYMSGKSRLNPVAGVMTSINEAPASAFAARTILGLGNEVSALDGISTLDAFYTGFGPLRGYITREFKRENIFMLGGNYIFSGAQGGFLDQLIVRGEVSVTPDKQFTDLSLSRNFIKETEVVSALIVEKYHNFSLELPAAYMVAQWMHRTESDLFGRHLSGNENRGFQSYIDPVTGAIDPSAQVAGTAQPTGQSSADYVAFAIQQPFPDLIWRADFTVLADVDGGFLLQPGVRYRPSAAWQWDVYANIIAGG--GSDNDNIMQSLDHNDEVFMRVTYAF 861
            D T   SA EWF  +G +RLN + G+  SI E PA+A     +LG       +     LD F+   G LRG+I RE+KRE     G  Y+FS A G  LDQLIV  E + TPD+ FT+++LS+N+I+E E ++AL++EKY  FS   PA Y+V Q+M+R+ESDLFGRHLSG            + G  D  A+        G    + V FA+QQP P L WR D  VL D  GG L+QP +RY+PS  W  + + N I G   G DN+NIMQ+L++ DE+ +R  + F
Sbjct:  371 DPTGVVSAQEWFTYAGNARLNGLTGLNASITEFPAAA-----LLGANPVPDMVTAGGELDTFFQASGGLRGHIAREYKRETNLGAGIGYVFSAAPGSVLDQLIVNLEATFTPDRNFTNVTLSKNYIEEDEWIAALVMEKYQRFSQSFPATYLVFQYMYRSESDLFGRHLSG------------MGGNRDKIAK--------GVDGWNGVVFAMQQPSPTLTWRFDGAVLLDTRGGILVQPALRYQPSTTWSIETFYNFINGNVYGDDNENIMQTLEYADEIGIRAGFQF 634          
BLAST of mRNA_M-pyrifera_M_contig80133.18781.1 vs. uniprot
Match: H0PTP8_9RHOO (Uncharacterized protein n=3 Tax=Rhodocyclales TaxID=206389 RepID=H0PTP8_9RHOO)

HSP 1 Score: 216 bits (551), Expect = 1.630e-62
Identity = 125/294 (42.52%), Postives = 174/294 (59.18%), Query Frame = 1
Query:   19 SAAEWFYMSGKSRLNPVAGVMTSINEAPASAF--AARTILGLGNEVSA--------LDGISTLDAFY---TGFGPLRGYITREFKRENIFMLGGNYIFSGAQGGFLDQLIVRGEVSVTPDKQFTDLSLSRNFIKETEVVSALIVEKYHNFSLELPAAYMVAQWMHRTESDLFGRHLSGNENRGFQSYIDPVTGAIDPSAQVAGTAQPTGQSSADYVAFAIQQPFPDLIWRADFTVLADVDGGFLLQPGVRYRPSAAWQWDVYANIIAGGGSDNDNIMQSLDHNDEVFMRVTYAF 861
            SAAEWF+ +    L+ V G+ +++NE PA+    +A    G G  VS               LD F+    G G L+G++ RE+ REN+F    N++F G    FLDQL+ R E+S TPDK+FT+ +LSR  I+E E   A I+EKYH FS E+PA Y+VAQW+H+T SDLFGRHLSG +N+  +                    +P G  S + VA AIQQP   L WR D TVL D+ GG+L+QPGV+++P+ ++Q D+Y NII   G  +D+   +L+  +EVFMR T+ F
Sbjct:  331 SAAEWFHYASLVGLDGVGGLESALNEFPATLGLGSAAVAAGCGGTVSGGKISLPNKAAASCVLDTFFDPVVGLGNLKGHLAREYPRENVFGFSVNHVFEGEPDSFLDQLVGRFELSWTPDKKFTNPTLSRRLIEENETQFAFILEKYHKFSAEIPATYIVAQWLHKTASDLFGRHLSGLDNKPGE--------------------RPKGLDSFNAVALAIQQPSKTLEWRGDLTVLTDLRGGWLIQPGVKWKPNKSFQLDLYGNIIRSDGG-HDDFGANLESANEVFMRGTFYF 603          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80133.18781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2BD81_9GAMM9.880e-9251.08Uncharacterized protein n=1 Tax=Thiotrichales bact... [more]
A0A2N3EHW8_9PROT2.510e-7246.15Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A382S115_9ZZZZ3.160e-7149.56Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A2E1EIF7_9HYPH1.790e-7045.45Uncharacterized protein n=2 Tax=Hyphomicrobiales T... [more]
A7HS96_PARL15.890e-7045.61Uncharacterized protein n=1 Tax=Parvibaculum lavam... [more]
A0A7C7SLV2_9GAMM1.330e-6842.81DUF1302 family protein n=1 Tax=Gammaproteobacteria... [more]
A0A381T9X7_9ZZZZ4.780e-6543.84Uncharacterized protein n=1 Tax=marine metagenome ... [more]
A0A2N5Y045_9GAMM5.840e-6444.52Uncharacterized protein n=2 Tax=Halieaceae TaxID=1... [more]
A0A4V3F581_9GAMM1.400e-6343.25Uncharacterized protein n=1 Tax=Panacagrimonas per... [more]
H0PTP8_9RHOO1.630e-6242.52Uncharacterized protein n=3 Tax=Rhodocyclales TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80133contigM-pyrifera_M_contig80133:6..869 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score240.4
Seed ortholog evalue1.1e-60
Seed eggNOG ortholog402881.Plav_1158
KEGG koko:K02674
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Tfp pilus assembly protein tip-associated adhesin
EggNOG OGs1R6MQ@1224,COG3419@1,COG3419@2
COG Functional cat.NU
Best tax levelProteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02035,ko02044
Exons1
Model size864
Cds size864
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816706.6669836-CDS-M-pyrifera_M_contig80133:5..8691622816706.6669836-CDS-M-pyrifera_M_contig80133:5..869Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80133 6..869 +
1692278131.740774-CDS-M-pyrifera_M_contig80133:5..8691692278131.740774-CDS-M-pyrifera_M_contig80133:5..869Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80133 6..869 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80133.18781.1prot_M-pyrifera_M_contig80133.18781.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig80133 6..869 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig80133.18781.1

>prot_M-pyrifera_M_contig80133.18781.1 ID=prot_M-pyrifera_M_contig80133.18781.1|Name=mRNA_M-pyrifera_M_contig80133.18781.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=288bp
DSTATASAAEWFYMSGKSRLNPVAGVMTSINEAPASAFAARTILGLGNEV
SALDGISTLDAFYTGFGPLRGYITREFKRENIFMLGGNYIFSGAQGGFLD
QLIVRGEVSVTPDKQFTDLSLSRNFIKETEVVSALIVEKYHNFSLELPAA
YMVAQWMHRTESDLFGRHLSGNENRGFQSYIDPVTGAIDPSAQVAGTAQP
TGQSSADYVAFAIQQPFPDLIWRADFTVLADVDGGFLLQPGVRYRPSAAW
QWDVYANIIAGGGSDNDNIMQSLDHNDEVFMRVTYAF*
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mRNA from alignment at M-pyrifera_M_contig80133:6..869+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig80133.18781.1 ID=mRNA_M-pyrifera_M_contig80133.18781.1|Name=mRNA_M-pyrifera_M_contig80133.18781.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig80133:6..869+ (Macrocystis pyrifera P11B4 male)
GATTCCACGGCGACGGCCTCGGCCGCGGAGTGGTTTTACATGTCCGGCAA ATCGCGCCTGAACCCCGTCGCCGGAGTCATGACTTCGATCAACGAAGCAC CCGCGTCCGCGTTCGCCGCGCGCACGATCCTCGGGCTCGGCAACGAAGTG TCCGCGCTCGACGGGATCTCGACGCTCGATGCGTTCTATACGGGCTTCGG GCCGCTGCGCGGTTACATCACGCGTGAATTCAAACGTGAAAACATCTTCA TGCTCGGTGGCAACTACATCTTCAGTGGCGCACAGGGCGGTTTTCTCGAC CAGCTGATCGTTCGCGGCGAAGTGTCCGTCACCCCGGACAAGCAGTTCAC GGACCTCTCGCTGAGCCGGAATTTCATCAAGGAAACGGAAGTCGTCTCGG CGCTGATCGTCGAGAAATATCATAATTTCTCGCTCGAACTCCCGGCCGCG TACATGGTTGCGCAATGGATGCACCGCACGGAATCCGATTTGTTCGGACG GCACCTGAGCGGTAACGAGAACCGCGGCTTCCAGTCCTATATCGACCCGG TCACGGGCGCGATCGACCCGAGCGCGCAAGTCGCCGGCACGGCCCAGCCG ACCGGGCAAAGCAGCGCCGATTACGTCGCGTTCGCAATCCAGCAGCCGTT TCCGGATCTGATCTGGCGCGCGGACTTCACGGTCCTCGCCGACGTCGACG GTGGCTTCCTGCTCCAGCCGGGCGTGCGCTACCGCCCGTCGGCCGCGTGG CAATGGGATGTCTACGCGAACATCATCGCCGGTGGTGGCAGCGACAATGA CAACATCATGCAGTCGCTCGATCACAACGACGAAGTCTTCATGCGCGTCA CCTACGCGTTCTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig80133:6..869+

>mRNA_M-pyrifera_M_contig80133.18781.1 ID=mRNA_M-pyrifera_M_contig80133.18781.1|Name=mRNA_M-pyrifera_M_contig80133.18781.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1728bp|location=Sequence derived from alignment at M-pyrifera_M_contig80133:6..869+ (Macrocystis pyrifera P11B4 male)
GATTCCACGGCGACGGCCTCGGCCGCGGAGTGGTTTTACATGTCCGGCAA
ATCGCGCCTGAACCCCGTCGCCGGAGTCATGACTTCGATCAACGAAGCAC
CCGCGTCCGCGTTCGCCGCGCGCACGATCCTCGGGCTCGGCAACGAAGTG
TCCGCGCTCGACGGGATCTCGACGCTCGATGCGTTCTATACGGGCTTCGG
GCCGCTGCGCGGTTACATCACGCGTGAATTCAAACGTGAAAACATCTTCA
TGCTCGGTGGCAACTACATCTTCAGTGGCGCACAGGGCGGTTTTCTCGAC
CAGCTGATCGTTCGCGGCGAAGTGTCCGTCACCCCGGACAAGCAGTTCAC
GGACCTCTCGCTGAGCCGGAATTTCATCAAGGAAACGGAAGTCGTCTCGG
CGCTGATCGTCGAGAAATATCATAATTTCTCGCTCGAACTCCCGGCCGCG
TACATGGTTGCGCAATGGATGCACCGCACGGAATCCGATTTGTTCGGACG
GCACCTGAGCGGTAACGAGAACCGCGGCTTCCAGTCCTATATCGACCCGG
TCACGGGCGCGATCGACCCGAGCGCGCAAGTCGCCGGCACGGCCCAGCCG
ACCGGGCAAAGCAGCGCCGATTACGTCGCGTTCGCAATCCAGCAGCCGTT
TCCGGATCTGATCTGGCGCGCGGACTTCACGGTCCTCGCCGACGTCGACG
GTGGCTTCCTGCTCCAGCCGGGCGTGCGCTACCGCCCGTCGGCCGCGTGG
CAATGGGATGTCTACGCGAACATCATCGCCGGTGGTGGCAGCGACAATGA
CAACATCATGCAGTCGCTCGATCACAACGACGAAGTCTTCATGCGCGTCA
CCTACGCGTTCTAAGATTCCACGGCGACGGCCTCGGCCGCGGAGTGGTTT
TACATGTCCGGCAAATCGCGCCTGAACCCCGTCGCCGGAGTCATGACTTC
GATCAACGAAGCACCCGCGTCCGCGTTCGCCGCGCGCACGATCCTCGGGC
TCGGCAACGAAGTGTCCGCGCTCGACGGGATCTCGACGCTCGATGCGTTC
TATACGGGCTTCGGGCCGCTGCGCGGTTACATCACGCGTGAATTCAAACG
TGAAAACATCTTCATGCTCGGTGGCAACTACATCTTCAGTGGCGCACAGG
GCGGTTTTCTCGACCAGCTGATCGTTCGCGGCGAAGTGTCCGTCACCCCG
GACAAGCAGTTCACGGACCTCTCGCTGAGCCGGAATTTCATCAAGGAAAC
GGAAGTCGTCTCGGCGCTGATCGTCGAGAAATATCATAATTTCTCGCTCG
AACTCCCGGCCGCGTACATGGTTGCGCAATGGATGCACCGCACGGAATCC
GATTTGTTCGGACGGCACCTGAGCGGTAACGAGAACCGCGGCTTCCAGTC
CTATATCGACCCGGTCACGGGCGCGATCGACCCGAGCGCGCAAGTCGCCG
GCACGGCCCAGCCGACCGGGCAAAGCAGCGCCGATTACGTCGCGTTCGCA
ATCCAGCAGCCGTTTCCGGATCTGATCTGGCGCGCGGACTTCACGGTCCT
CGCCGACGTCGACGGTGGCTTCCTGCTCCAGCCGGGCGTGCGCTACCGCC
CGTCGGCCGCGTGGCAATGGGATGTCTACGCGAACATCATCGCCGGTGGT
GGCAGCGACAATGACAACATCATGCAGTCGCTCGATCACAACGACGAAGT
CTTCATGCGCGTCACCTACGCGTTCTAA
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