mRNA_M-pyrifera_M_contig7992.18746.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7992.18746.1 vs. uniprot
Match: D7FI55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI55_ECTSI) HSP 1 Score: 222 bits (565), Expect = 1.450e-67 Identity = 102/130 (78.46%), Postives = 122/130 (93.85%), Query Frame = 1 Query: 1 MSGLLNLREFIVGIWNYCTYDATLVSKLLFDIFDVDRRGKVTMAELDAMLRMLYGSPEADPDLLRFFAINGDGDEDSLAFDEFAQVVKDNYQVAQPAFELQKALRRKVLGVKHWEKMTRKRTKLFANYDQ 390 MSG+L+LREFI+G+WNYCTYD TLV+K+LF IFDVD+RG+VTMAELDAM+RMLYGSP+ADPDLL+ A+NG GDED+L FDEF Q V+DNY+VAQPAFELQKA+RRKVLGVK+WEKMT++RTK+FANYDQ Sbjct: 99 MSGMLDLREFIIGVWNYCTYDTTLVAKILFGIFDVDKRGRVTMAELDAMVRMLYGSPDADPDLLKALAVNGSGDEDALTFDEFLQAVQDNYEVAQPAFELQKAIRRKVLGVKYWEKMTKQRTKMFANYDQ 228
BLAST of mRNA_M-pyrifera_M_contig7992.18746.1 vs. uniprot
Match: A0A7S2G1T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G1T6_9STRA) HSP 1 Score: 130 bits (327), Expect = 6.470e-34 Identity = 62/139 (44.60%), Postives = 93/139 (66.91%), Query Frame = 1 Query: 4 SGLLNLREFIVGIWNYCTYDATLVSKLLFDIFDVDRRGKVTMAELDAMLRMLYGSPEAD--------PDLLRFFAINGDGDEDSLAFDEFAQVVKDNYQVAQPAFELQKALRRKVLGVKHWEKMTRKRTKLFANYDQVG 396 SG LN EF VG+WNYCTYD L++KL FDIFD+D++GK+ +AE DA+LRM+Y P D +++ +NGDG+ + DEF+ +++ + + QPA +LQ+ALR+++LGVK W+ +T R +LFA D + Sbjct: 90 SGALNFSEFAVGVWNYCTYDVRLITKLAFDIFDIDQQGKLDLAECDALLRMVYDVPHLDNIEGPPSGKEIMELIDVNGDGE---VTIDEFSDLMETHLYILQPALDLQRALRQRLLGVKFWDGLTELRRQLFAAEDSLA 225
BLAST of mRNA_M-pyrifera_M_contig7992.18746.1 vs. uniprot
Match: F0YJ91_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJ91_AURAN) HSP 1 Score: 131 bits (330), Expect = 5.640e-33 Identity = 59/128 (46.09%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 4 SGLLNLREFIVGIWNYCTYDATLVSKLLFDIFDVDRRGKVTMAELDAMLRMLYGSPEADPDLLRFFAINGDGDEDSLAFDEFAQVVKDNYQVAQPAFELQKALRRKVLGVKHWEKMTRKRTKLFANYD 387 SG L+ EF++G+WN+ TYDA+L++KL ++IFDVDR GK+ MAE DAMLRM+Y P++DP++L +N DG +++ +E Q+++ + + PAF+LQ+ LR ++LGVK+WE +++R F+ YD Sbjct: 7 SGFLDFNEFLIGVWNWNTYDASLIAKLAYNIFDVDREGKIDMAEADAMLRMVYNVPKSDPEILEKMDVNKDG---NISLEELEQLIEVHNYILMPAFDLQRMLRIRILGVKYWEAESQRRRVYFSGYD 131
BLAST of mRNA_M-pyrifera_M_contig7992.18746.1 vs. uniprot
Match: A0A7S2CHR9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CHR9_9STRA) HSP 1 Score: 130 bits (327), Expect = 7.260e-33 Identity = 62/139 (44.60%), Postives = 93/139 (66.91%), Query Frame = 1 Query: 4 SGLLNLREFIVGIWNYCTYDATLVSKLLFDIFDVDRRGKVTMAELDAMLRMLYGSPEAD--------PDLLRFFAINGDGDEDSLAFDEFAQVVKDNYQVAQPAFELQKALRRKVLGVKHWEKMTRKRTKLFANYDQVG 396 SG LN EF VG+WNYCTYD L++KL FDIFD+D++GK+ +AE DA+LRM+Y P D +++ +NGDG+ + DEF+ +++ + + QPA +LQ+ALR+++LGVK W+ +T R +LFA D + Sbjct: 90 SGALNFSEFAVGVWNYCTYDVRLITKLAFDIFDIDQQGKLDLAECDALLRMVYDVPHLDNIEGPPSGKEIMELIDVNGDGE---VTIDEFSDLMETHLYILQPALDLQRALRQRLLGVKFWDGLTELRRQLFAAEDSLA 225
BLAST of mRNA_M-pyrifera_M_contig7992.18746.1 vs. uniprot
Match: A0A7S1XZZ4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZZ4_9STRA) HSP 1 Score: 128 bits (321), Expect = 4.600e-32 Identity = 60/130 (46.15%), Postives = 89/130 (68.46%), Query Frame = 1 Query: 4 SGLLNLREFIVGIWNYCTYDATLVSKLLFDIFDVDRRGKVTMAELDAMLRMLYGSPEADPDLLRFFAINGDGDEDSLAFDEFAQVVKDNYQVAQPAFELQKALRRKVLGVKHWEKMTRKRTKLFANYDQV 393 SG+L+L+EF++GIWNYCTYD L+SK F IFD+D G++ + E DA++RML+ + E D DL++ +G G S+ DEF + + + + QPA ++Q+ LR K GVK+WEK T+KR K FA +D + Sbjct: 86 SGMLDLKEFMIGIWNYCTYDLKLMSKFAFSIFDIDLEGELNLHECDALMRMLFDTEETDHDLIQLIDSDGSG---SVTQDEFFAITESHPHMLQPALDMQRVLRTKFFGVKYWEKETKKRQKEFAAFDSL 212
BLAST of mRNA_M-pyrifera_M_contig7992.18746.1 vs. uniprot
Match: A0A7S2SD95_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD95_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.110e-30 Identity = 58/122 (47.54%), Postives = 85/122 (69.67%), Query Frame = 1 Query: 4 SGLLNLREFIVGIWNYCTYDATLVSKLLFDIFDVDRRGKVTMAELDAMLRMLYGSP-----EADPD---LLRFFAINGDGDEDSLAFDEFAQVVKDNYQVAQPAFELQKALRRKVLGVKHWE 345 SG L+ EF VG+WNYCTYD L++KL FDIFDVDR+G++ + E DA+LRM+Y E PD LL+ +NGDG+ + DEF+ +++ + + PAF+LQ+ALR+++LG+K+WE Sbjct: 105 SGALDFHEFCVGLWNYCTYDVRLITKLAFDIFDVDRKGRLDICECDALLRMVYDVEDLEEIEGPPDGKQLLKEIDVNGDGE---VTIDEFSDLMETHQYILSPAFDLQRALRQRLLGIKYWE 223
BLAST of mRNA_M-pyrifera_M_contig7992.18746.1 vs. uniprot
Match: A0A7S3UVV0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVV0_HETAK) HSP 1 Score: 119 bits (297), Expect = 1.150e-28 Identity = 61/140 (43.57%), Postives = 90/140 (64.29%), Query Frame = 1 Query: 4 SGLLNLREFIVGIWNYCTYDATLVSKLLFDIFDVDRRGKVTMAELDAMLRMLYGSPE--ADPDLLRFFAINGDGD----------EDSLAFDEFAQVVKDNYQVAQPAFELQKALRRKVLGVKHWEKMTRKRTKLFANYD 387 SG L+L+EF +G+WNYCTYD LVSKL FDIFDVD+ G++ + E DA+LRM++ ADP LL D + E ++F++F + ++ + QPA +LQ A+R+K LGVK+WE T++R ++FA +D Sbjct: 88 SGNLDLKEFCIGVWNYCTYDIRLVSKLAFDIFDVDKIGQLELCECDALLRMMWNPKNEMADPVLLGRIEEFADAEAEDTAKDAYKEKVISFEKFVEAIERYESIIQPALDLQHAMRKKFLGVKYWETKTQRRAEMFAEFD 227
BLAST of mRNA_M-pyrifera_M_contig7992.18746.1 vs. uniprot
Match: A0A8J2SZ55_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZ55_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 3.180e-21 Identity = 52/128 (40.62%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 4 SGLLNLREFIVGIWNYCTYDATLVSKLLFDIFDVDRRGKVTMAELDAMLRMLYGSPEADPDLLRFFAINGDGDEDSLAFDEFAQVVKDNYQVAQPAFELQKALRRKVLGVKHWEKMTRKRTKLFANYD 387 SG L+ REF++G+WN+ TY + E DAMLRM+Y S +ADP LL INGDG+ ++ +E Q V+++ V PAF+LQ+ LR+++LGV++WE+ T +R FA YD Sbjct: 119 SGQLDFREFMIGVWNWNTYXXXXXXXXXXXXXXXXXXXXXXLHEADAMLRMVYASRKADPLLLTQIDINGDGE---VSMEELQQTVEEDNSVLAPAFQLQRMLRQRILGVRYWEQETLRRQTYFAGYD 243
BLAST of mRNA_M-pyrifera_M_contig7992.18746.1 vs. uniprot
Match: A0A7S2B406_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B406_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 7.160e-18 Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = 1 Query: 28 FIVGIWNYCTYDATLVSKLLFDIFDVDRRGKVTMAELDAMLRMLYG--------SPEADPDLLRFFAINGDGDEDSLAFDEFAQVVKDNYQVAQPAFEL 300 F VG+WNYCTYD LV+KL FDIFDVD GK+ + E DA++RM+Y P + ++L INGD + + DEF+ +++ + + PAF+L Sbjct: 65 FSVGVWNYCTYDVRLVTKLAFDIFDVDHLGKLDIPECDALIRMVYDVDDVDKIQGPPSGKEILEQIDINGDNE---VTIDEFSDLMESHMYILAPAFDL 160
BLAST of mRNA_M-pyrifera_M_contig7992.18746.1 vs. uniprot
Match: A0A7S1TRT1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRT1_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 5.680e-16 Identity = 45/120 (37.50%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 4 SGLLNLREFIVGIWNYCTYDATLVSKLLFDIFDVDRRGKVTMAELDAMLRMLYGSPEADPDLLRFF-AINGDGDEDSLAFDEFAQVVKDNYQVAQPAFELQKALRRKVLGVKHWEKMTRK 360 GLLN EFI ++ YC+Y+ + K FDI+D D G + + E+ +++ +YG E D +R ++ DG +++F EFA K Q+ PAF +Q+ +R+KV GVK+WE++T K Sbjct: 82 DGLLNFPEFISSLYYYCSYNYDGLVKYAFDIYDRDGSGSLEVDEIHTLVKFVYGKKELDDRTMRIINRVDHDG-SGTVSFIEFAAYNKKFPQILFPAFNMQEIVRKKVFGVKYWERLTLK 200 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7992.18746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7992.18746.1 >prot_M-pyrifera_M_contig7992.18746.1 ID=prot_M-pyrifera_M_contig7992.18746.1|Name=mRNA_M-pyrifera_M_contig7992.18746.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp MSGLLNLREFIVGIWNYCTYDATLVSKLLFDIFDVDRRGKVTMAELDAMLback to top mRNA from alignment at M-pyrifera_M_contig7992:253..1978- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7992.18746.1 ID=mRNA_M-pyrifera_M_contig7992.18746.1|Name=mRNA_M-pyrifera_M_contig7992.18746.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1726bp|location=Sequence derived from alignment at M-pyrifera_M_contig7992:253..1978- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7992:253..1978- >mRNA_M-pyrifera_M_contig7992.18746.1 ID=mRNA_M-pyrifera_M_contig7992.18746.1|Name=mRNA_M-pyrifera_M_contig7992.18746.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig7992:253..1978- (Macrocystis pyrifera P11B4 male)back to top |