mRNA_M-pyrifera_M_contig79876.18738.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79876.18738.1
Unique NamemRNA_M-pyrifera_M_contig79876.18738.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig79876.18738.1 vs. uniprot
Match: A0A7S4D7Q8_HETAK (Protein transport protein SEC23 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7Q8_HETAK)

HSP 1 Score: 241 bits (614), Expect = 1.810e-78
Identity = 116/167 (69.46%), Postives = 128/167 (76.65%), Query Frame = 1 
Query:    1 WDFTALEEHDGLRFSWNVWPSSSTEAADSVVPLGCLYTPLKQIDGMPPALGYEPVRCKNSSCRAVLNPYCSIDFNTKLWSCPFCTTRNSFPPAYASAISETNLPAELIPDYTTVEYQLPGQD-KGAPSFLFVVDTCLPAKELEELRDSLQQSLALLPPKARVGLVTF 498
            WD  A EE DG RFSWNVWPSS  EA   VVPLGCLYTPLK+I+GMPPAL Y+P+RC  + C  +LNP+C IDF TKLW CPFC  RN FPP YA  ISETNLPAELIP +TT+EY+L      G P FLFVVDTCLP  EL+EL+DSLQQSL LLPP A VGLVTF
Sbjct:    4 WDVHAAEERDGARFSWNVWPSSKLEATRIVVPLGCLYTPLKKIEGMPPALAYDPIRC--NGCGGILNPFCQIDFRTKLWVCPFCQQRNHFPPHYAENISETNLPAELIPQFTTIEYELQTAPMSGPPVFLFVVDTCLPEDELDELKDSLQQSLNLLPPDALVGLVTF 168
[Close]
BLAST of mRNA_M-pyrifera_M_contig79876.18738.1 vs. uniprot
Match: A0A7S2Y1K9_9STRA (Protein transport protein SEC23 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1K9_9STRA)

HSP 1 Score: 224 bits (572), Expect = 1.020e-71
Identity = 109/167 (65.27%), Postives = 124/167 (74.25%), Query Frame = 1 
Query:    1 WDFTALEEHDGLRFSWNVWPSSSTEAADSVVPLGCLYTPLKQIDGMPPALGYEPVRCKNSSCRAVLNPYCSIDFNTKLWSCPFCTTRNSFPPAYASAISETNLPAELIPDYTTVEYQLPGQD-KGAPSFLFVVDTCLPAKELEELRDSLQQSLALLPPKARVGLVTF 498
            WD+ A EE DG RFSWNVWPSS  EA   VVP+GCLYTPLK+++ MPP L Y+P+RC  + C A+LNPYC IDF TKLW CPFC  RN F P YA  ISETNLPAELIP +TTVEY+L      G P F+FVVDTCL   EL+EL+DSLQQ L LLP  A VGL+TF
Sbjct:    4 WDWGAAEERDGARFSWNVWPSSRLEATRIVVPVGCLYTPLKRLENMPPPLAYDPIRC--NGCGAILNPYCQIDFMTKLWCCPFCMQRNHFLPHYAENISETNLPAELIPQFTTVEYELQSSPVAGPPVFVFVVDTCLHDDELDELKDSLQQLLNLLPENALVGLITF 168
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BLAST of mRNA_M-pyrifera_M_contig79876.18738.1 vs. uniprot
Match: A0A7S3HKU0_9STRA (Protein transport protein SEC23 (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKU0_9STRA)

HSP 1 Score: 222 bits (566), Expect = 1.260e-71
Identity = 104/166 (62.65%), Postives = 124/166 (74.70%), Query Frame = 1 
Query:    1 WDFTALEEHDGLRFSWNVWPSSSTEAADSVVPLGCLYTPLKQIDGMPPALGYEPVRCKNSSCRAVLNPYCSIDFNTKLWSCPFCTTRNSFPPAYASAISETNLPAELIPDYTTVEYQLPGQDKGAPSFLFVVDTCLPAKELEELRDSLQQSLALLPPKARVGLVTF 498
            WDF   E+ DG+R SWN WPSS  EA   VVPLGCLY+PLK+I+ MP +L Y+P+RC  + C AVLNPY  +DF TKLW+CPFCT RN FPP YA  ISE +LPAELIP +TTVEY+L  Q  G P+F+FVVDTC+   EL  LRD+LQQ+L LLP  A VGL+TF
Sbjct:    5 WDFHGPEQRDGIRNSWNTWPSSRIEATRIVVPLGCLYSPLKRIENMPGSLAYDPIRC--NGCTAVLNPYVQVDFRTKLWTCPFCTGRNHFPPHYAENISEASLPAELIPQFTTVEYELQSQPVGPPAFMFVVDTCIDEDELTHLRDALQQTLNLLPEDALVGLITF 168
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BLAST of mRNA_M-pyrifera_M_contig79876.18738.1 vs. uniprot
Match: A0A2P4YPF1_9STRA (Protein transport protein SEC23 (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YPF1_9STRA)

HSP 1 Score: 226 bits (576), Expect = 6.170e-70
Identity = 101/166 (60.84%), Postives = 125/166 (75.30%), Query Frame = 1 
Query:    1 WDFTALEEHDGLRFSWNVWPSSSTEAADSVVPLGCLYTPLKQIDGMPPALGYEPVRCKNSSCRAVLNPYCSIDFNTKLWSCPFCTTRNSFPPAYASAISETNLPAELIPDYTTVEYQLPGQDKGAPSFLFVVDTCLPAKELEELRDSLQQSLALLPPKARVGLVTF 498
            WDF A+E  DG+RFSWN WP +  E    V+P GCLY PLK IDGMPPA+ Y+P+ CK  +C AVLNP+C +DF +KLW CPFC TRN FPP YA  I++ NLPAELIP YTT+EY+L  +  G P F+F +DTC+P +ELEEL+DS+QQ+L  LPP A +GLVTF
Sbjct:  110 WDFHAMEAKDGVRFSWNSWPCTKLEQTRCVMPTGCLYQPLKPIDGMPPAVEYDPIHCK--ACAAVLNPFCQVDFVSKLWVCPFCVTRNHFPPHYAENITQENLPAELIPQYTTLEYELQNRQAGPPVFVFCIDTCVPEEELEELKDSIQQTLNQLPPDALIGLVTF 273
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BLAST of mRNA_M-pyrifera_M_contig79876.18738.1 vs. uniprot
Match: A0A5A8D4Z4_CAFRO (Protein transport protein SEC23 n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D4Z4_CAFRO)

HSP 1 Score: 230 bits (586), Expect = 3.130e-68
Identity = 107/166 (64.46%), Postives = 132/166 (79.52%), Query Frame = 1 
Query:    1 WDFTALEEHDGLRFSWNVWPSSSTEAADSVVPLGCLYTPLKQIDGMPPALGYEPVRCKNSSCRAVLNPYCSIDFNTKLWSCPFCTTRNSFPPAYASAISETNLPAELIPDYTTVEYQLPGQDKGAPSFLFVVDTCLPAKELEELRDSLQQSLALLPPKARVGLVTF 498
            WDF+ LEE DGLRFSWN WPSS  EA  +VVPLGCLY+PL+QI+ MP AL Y+PVRCK  +C+AVLNP+C +DF  K+WSC FC  RN+FPP YA+ I+E+NLPAELI  Y+TVEY+L G + G P FLFVVDT +   ELE+L+DSL+QSL+L+P  A VGL+TF
Sbjct:   10 WDFSILEESDGLRFSWNQWPSSRAEAQKAVVPLGCLYSPLRQIENMPEALQYDPVRCK--TCKAVLNPFCQVDFTNKVWSCCFCMGRNAFPPHYAAHITESNLPAELIQQYSTVEYELQGTEAGPPCFLFVVDTTVDKDELEQLKDSLEQSLSLVPDDALVGLITF 173
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BLAST of mRNA_M-pyrifera_M_contig79876.18738.1 vs. uniprot
Match: A0A835YT42_9STRA (Protein transport protein SEC23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT42_9STRA)

HSP 1 Score: 230 bits (586), Expect = 3.170e-68
Identity = 105/166 (63.25%), Postives = 128/166 (77.11%), Query Frame = 1 
Query:    1 WDFTALEEHDGLRFSWNVWPSSSTEAADSVVPLGCLYTPLKQIDGMPPALGYEPVRCKNSSCRAVLNPYCSIDFNTKLWSCPFCTTRNSFPPAYASAISETNLPAELIPDYTTVEYQLPGQDKGAPSFLFVVDTCLPAKELEELRDSLQQSLALLPPKARVGLVTF 498
            WD    EE DG+RFSWNVWPSS  EA   VVP GCLY+PLK+++GMPPAL Y+P+RC  + C A+LNPY  ID+ +KLW+CPFC  RN FPP YA  ISETNLPAELIP +TTVEY+L    +G P+FLF+VDTC+  +EL++L+DSLQQ+L LLP    VGLVTF
Sbjct:   10 WDLQGNEERDGVRFSWNVWPSSKLEATRIVVPTGCLYSPLKRLEGMPPALAYDPIRC--NGCGAILNPYAQIDYRSKLWACPFCMNRNHFPPHYAENISETNLPAELIPQFTTVEYELTAPSQGPPAFLFLVDTCMLEEELDQLKDSLQQTLNLLPEDTLVGLVTF 173
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BLAST of mRNA_M-pyrifera_M_contig79876.18738.1 vs. uniprot
Match: A0A6U5KVT9_9STRA (Protein transport protein SEC23 (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5KVT9_9STRA)

HSP 1 Score: 216 bits (549), Expect = 3.370e-68
Identity = 105/170 (61.76%), Postives = 124/170 (72.94%), Query Frame = 1 
Query:    1 WDFTALEEHDGLRFSWNVWPSSSTEAADSVVPLGCLYTPLKQIDGM---PPALGYEPVRCKNSSCRAVLNPYCSIDFNTKLWSCPFCTTRNSFPPAYASAISETNLPAELIPDYTTVEYQLPG-QDKGAPSFLFVVDTCLPAKELEELRDSLQQSLALLPPKARVGLVTF 498
            WD +A EE  G R S++ WPSS  EA   + P G LYTPLK++D     P AL Y+PVRC  ++C AVLNPYC +DF +KLW CPFC TRN FPP YA AISETNLPAELIP Y T EY+LP   D+G P FLFVVDTC+  +EL EL DSLQQ+LALLP +A VGL+T+
Sbjct:   48 WDVSATEEMMGSRLSFHCWPSSRLEATRCIAPFGALYTPLKKLDPNCCPPTALPYDPVRCSTNTCHAVLNPYCQVDFRSKLWVCPFCLTRNHFPPHYADAISETNLPAELIPQYATCEYELPSVPDQGQPCFLFVVDTCVHPEELNELADSLQQALALLPEQALVGLITY 217
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BLAST of mRNA_M-pyrifera_M_contig79876.18738.1 vs. uniprot
Match: A0A2D4C7G0_PYTIN (Protein transport protein SEC23 n=3 Tax=Pythium TaxID=4797 RepID=A0A2D4C7G0_PYTIN)

HSP 1 Score: 229 bits (585), Expect = 1.020e-67
Identity = 102/166 (61.45%), Postives = 127/166 (76.51%), Query Frame = 1 
Query:    1 WDFTALEEHDGLRFSWNVWPSSSTEAADSVVPLGCLYTPLKQIDGMPPALGYEPVRCKNSSCRAVLNPYCSIDFNTKLWSCPFCTTRNSFPPAYASAISETNLPAELIPDYTTVEYQLPGQDKGAPSFLFVVDTCLPAKELEELRDSLQQSLALLPPKARVGLVTF 498
            WDF  +E  DG+RFSWN WP +  E   SVVP+GCLYTPLK I+G+PPA+ Y+P+ CK  +C AVLNPYC +DF +KLW CPFC TRN FPP YA  I++ NLPAELIP +TT+EY+L G+  G P F+F +DTC+P  ELEEL+DS+QQ+L  LPP A +GLVTF
Sbjct:   82 WDFHGMEARDGVRFSWNSWPCTKLEQTRSVVPVGCLYTPLKPIEGIPPAVEYDPIHCK--TCMAVLNPYCQVDFVSKLWVCPFCVTRNHFPPHYAENITQENLPAELIPQFTTLEYELQGRQAGPPVFVFCIDTCVPEDELEELKDSIQQTLNQLPPDALIGLVTF 245
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BLAST of mRNA_M-pyrifera_M_contig79876.18738.1 vs. uniprot
Match: A0A7S2RKY7_9STRA (Protein transport protein SEC23 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RKY7_9STRA)

HSP 1 Score: 228 bits (581), Expect = 2.580e-67
Identity = 104/166 (62.65%), Postives = 131/166 (78.92%), Query Frame = 1 
Query:    1 WDFTALEEHDGLRFSWNVWPSSSTEAADSVVPLGCLYTPLKQIDGMPPALGYEPVRCKNSSCRAVLNPYCSIDFNTKLWSCPFCTTRNSFPPAYASAISETNLPAELIPDYTTVEYQLPGQDKGAPSFLFVVDTCLPAKELEELRDSLQQSLALLPPKARVGLVTF 498
            +DF A E+ +G+RFSWN WP+S  +A  +VVPLGCLYTPLKQI+ MP  L YEP+RCKN +C+AVLNP+C +D  +KLW+CPFC TRNSFP  YA  I++ NLPAELIP YTT+EYQLP ++ G P FLFVVD  +  +ELEEL+DSL QSL++LP  A +GL+TF
Sbjct:   67 YDFQAEEDRNGVRFSWNEWPNSKIDAERAVVPLGCLYTPLKQIEEMP-ILQYEPIRCKNQNCQAVLNPWCQVDIRSKLWTCPFCLTRNSFPAHYADNITDVNLPAELIPQYTTIEYQLPNREAGPPVFLFVVDIAVSEQELEELKDSLLQSLSILPENALIGLITF 231
[Close]
BLAST of mRNA_M-pyrifera_M_contig79876.18738.1 vs. uniprot
Match: A0A6U3YQE8_9STRA (Protein transport protein SEC23 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YQE8_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.100e-66
Identity = 106/168 (63.10%), Postives = 125/168 (74.40%), Query Frame = 1 
Query:    1 WDFTALEEHDGLRFSWNVWPSSSTEAADSVVPLGCLYTPLKQIDGMPP--ALGYEPVRCKNSSCRAVLNPYCSIDFNTKLWSCPFCTTRNSFPPAYASAISETNLPAELIPDYTTVEYQLPGQDKGAPSFLFVVDTCLPAKELEELRDSLQQSLALLPPKARVGLVTF 498
            WD  A+EE DG R SWNVWPSS  EA   VVP+GCLYTPLK++  MPP  AL Y+P+RC N  C AVLNPYC IDF TKLWSCPFC  RN FPP YA  ++ETNLPAELIP YTT+EY+L       P FL +VDTC+  +E++EL+DSLQQ+L L+P  A VGL+TF
Sbjct:   16 WDVLAMEERDGARLSWNVWPSSRLEATRIVVPVGCLYTPLKRLGSMPPTGALPYDPIRCNN--CGAVLNPYCQIDFRTKLWSCPFCLKRNHFPPLYAENMTETNLPAELIPQYTTIEYELQSAPHSPPVFLLLVDTCVDEEEMDELKDSLQQTLNLIPENALVGLITF 181
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79876.18738.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4D7Q8_HETAK1.810e-7869.46Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A7S2Y1K9_9STRA1.020e-7165.27Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A7S3HKU0_9STRA1.260e-7162.65Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A2P4YPF1_9STRA6.170e-7060.84Protein transport protein SEC23 (Fragment) n=2 Tax... [more]
A0A5A8D4Z4_CAFRO3.130e-6864.46Protein transport protein SEC23 n=1 Tax=Cafeteria ... [more]
A0A835YT42_9STRA3.170e-6863.25Protein transport protein SEC23 n=1 Tax=Tribonema ... [more]
A0A6U5KVT9_9STRA3.370e-6861.76Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A2D4C7G0_PYTIN1.020e-6761.45Protein transport protein SEC23 n=3 Tax=Pythium Ta... [more]
A0A7S2RKY7_9STRA2.580e-6762.65Protein transport protein SEC23 n=1 Tax=labyrinthu... [more]
A0A6U3YQE8_9STRA1.100e-6663.10Protein transport protein SEC23 n=1 Tax=Dictyocha ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79876contigM-pyrifera_M_contig79876:2..816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score228.4
Seed ortholog evalue2.4e-57
Seed eggNOG ortholog325452.fgenesh_scip_prom.46568.5824
Preferred nameSEC23A
KEGG koko:K14006
KEGG Pathwayko04141,map04141
KEGG ModuleM00404
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0001501,GO:0002164,GO:0002165,GO:0002168,GO:0002376,GO:0002474,GO:0002478,GO:0002495,GO:0002504,GO:0003002,GO:0003330,GO:0003331,GO:0003400,GO:0003674,GO:0005096,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005795,GO:0005798,GO:0005829,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006914,GO:0006950,GO:0006996,GO:0007029,GO:0007030,GO:0007163,GO:0007275,GO:0007389,GO:0007399,GO:0007424,GO:0007517,GO:0007591,GO:0008047,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0008360,GO:0008363,GO:0009056,GO:0009057,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009887,GO:0009888,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0010498,GO:0010720,GO:0010769,GO:0010770,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016203,GO:0016236,GO:0019538,GO:0019882,GO:0019884,GO:0019886,GO:0019898,GO:0019941,GO:0022008,GO:0022407,GO:0022409,GO:0022603,GO:0022604,GO:0022607,GO:0030011,GO:0030117,GO:0030120,GO:0030127,GO:0030133,GO:0030134,GO:0030135,GO:0030154,GO:0030155,GO:0030163,GO:0030198,GO:0030234,GO:0030433,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030695,GO:0031090,GO:0031344,GO:0031346,GO:0031410,GO:0031982,GO:0031984,GO:0032386,GO:0032501,GO:0032502,GO:0032879,GO:0032991,GO:0033036,GO:0033043,GO:0033333,GO:0033334,GO:0033339,GO:0033554,GO:0034394,GO:0034613,GO:0034622,GO:0034976,GO:0035017,GO:0035107,GO:0035138,GO:0035148,GO:0035149,GO:0035152,GO:0035239,GO:0035293,GO:0035295,GO:0035459,GO:0036503,GO:0040003,GO:0042175,GO:0042221,GO:0042303,GO:0042335,GO:0042337,GO:0042886,GO:0043009,GO:0043062,GO:0043085,GO:0043087,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043547,GO:0043632,GO:0043933,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045785,GO:0046872,GO:0046907,GO:0046914,GO:0048002,GO:0048070,GO:0048079,GO:0048081,GO:0048087,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048209,GO:0048471,GO:0048475,GO:0048513,GO:0048518,GO:0048522,GO:0048562,GO:0048568,GO:0048598,GO:0048646,GO:0048699,GO:0048701,GO:0048702,GO:0048704,GO:0048705,GO:0048706,GO:0048731,GO:0048736,GO:0048814,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050773,GO:0050775,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051216,GO:0051234,GO:0051239,GO:0051240,GO:0051336,GO:0051345,GO:0051603,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051668,GO:0051716,GO:0051960,GO:0051962,GO:0060284,GO:0060341,GO:0060538,GO:0060541,GO:0060589,GO:0060627,GO:0060628,GO:0061024,GO:0061061,GO:0061448,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0070971,GO:0071702,GO:0071704,GO:0071705,GO:0071711,GO:0071840,GO:0072657,GO:0072659,GO:0090110,GO:0090113,GO:0090114,GO:0097708,GO:0098588,GO:0098772,GO:0098791,GO:0098796,GO:0098805,GO:0098827,GO:0120035,GO:1900006,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1903053,GO:1903055,GO:1903530,GO:1903532,GO:1904888,GO:1990778,GO:2000026
EggNOG free text desc.Sec23/Sec24 beta-sandwich domain
EggNOG OGs3QD2Z@4776,COG5047@1,KOG1986@2759
COG Functional cat.U
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131
Exons2
Model size498
Cds size498
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816702.5884252-CDS-M-pyrifera_M_contig79876:1..2901622816702.5884252-CDS-M-pyrifera_M_contig79876:1..290Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79876 2..290 -
1692278128.8792253-CDS-M-pyrifera_M_contig79876:1..2901692278128.8792253-CDS-M-pyrifera_M_contig79876:1..290Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79876 2..290 -
1622816702.6003437-CDS-M-pyrifera_M_contig79876:607..8161622816702.6003437-CDS-M-pyrifera_M_contig79876:607..816Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79876 608..816 -
1692278128.904084-CDS-M-pyrifera_M_contig79876:607..8161692278128.904084-CDS-M-pyrifera_M_contig79876:607..816Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79876 608..816 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79876.18738.1prot_M-pyrifera_M_contig79876.18738.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79876 2..816 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79876.18738.1

>prot_M-pyrifera_M_contig79876.18738.1 ID=prot_M-pyrifera_M_contig79876.18738.1|Name=mRNA_M-pyrifera_M_contig79876.18738.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp
WDFTALEEHDGLRFSWNVWPSSSTEAADSVVPLGCLYTPLKQIDGMPPAL
GYEPVRCKNSSCRAVLNPYCSIDFNTKLWSCPFCTTRNSFPPAYASAISE
TNLPAELIPDYTTVEYQLPGQDKGAPSFLFVVDTCLPAKELEELRDSLQQ
SLALLPPKARVGLVTF
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mRNA from alignment at M-pyrifera_M_contig79876:2..816-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79876.18738.1 ID=mRNA_M-pyrifera_M_contig79876.18738.1|Name=mRNA_M-pyrifera_M_contig79876.18738.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=815bp|location=Sequence derived from alignment at M-pyrifera_M_contig79876:2..816- (Macrocystis pyrifera P11B4 male)
TGGGACTTTACAGCGTTGGAAGAGCACGATGGTCTTCGATTTTCGTGGAA
CGTGTGGCCCTCCTCTTCGACAGAGGCAGCAGATTCGGTGGTGCCGCTGG
GGTGCTTGTACACCCCATTGAAGCAAATCGACGGAATGCCGCCTGCATTG
GGCTACGAGCCCGTTCGATGCAAGAATTCCTCTTGCAGAGCCGTATTGAA
CCCCTATTGGTATGTGGGTGGCCCTGGAGTGGACTTGGGTTGGGTCGGGG
GTAGGGGTGATGGGGGAGATGGGGTGTGAGGGTGTGGGGGTGTGGGGAAA
AGCGGGTTGTGGTTGGTTTGGTGGGGAGTTGGCAAGGGAGGAAAAAGGAG
CAGAGGAGGGGTAGAAGGGTTGGGTTGGTGGGTTTTTTGTGTTGTGGGGG
TCGTGTTTGTGGTGTCTTTGTGTTGTGGAGTGGTTTGTTGTGTTGTGGTG
GTGCTTGTGGGAGTTGGTTTTGTATGTTTGGTTTTGTTTGATTGCGATTT
GGTTGTATTTTTTGGATGTTGCGCAGTTCGATCGACTTCAACACCAAGCT
GTGGAGCTGTCCGTTCTGCACGACGCGGAACTCGTTTCCGCCAGCGTACG
CTAGCGCGATTTCGGAGACGAATCTTCCTGCGGAGCTGATTCCTGACTAC
ACGACGGTGGAGTACCAGTTGCCGGGCCAGGACAAGGGCGCGCCCTCGTT
TCTGTTCGTGGTGGACACGTGTCTGCCGGCGAAAGAGCTGGAGGAGCTTC
GGGATTCGCTGCAGCAGTCTTTGGCGCTTCTGCCCCCAAAAGCTCGCGTG
GGCCTGGTGACCTTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79876:2..816-

>mRNA_M-pyrifera_M_contig79876.18738.1 ID=mRNA_M-pyrifera_M_contig79876.18738.1|Name=mRNA_M-pyrifera_M_contig79876.18738.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig79876:2..816- (Macrocystis pyrifera P11B4 male)
TGGGACTTTACAGCGTTGGAAGAGCACGATGGTCTTCGATTTTCGTGGAA
CGTGTGGCCCTCCTCTTCGACAGAGGCAGCAGATTCGGTGGTGCCGCTGG
GGTGCTTGTACACCCCATTGAAGCAAATCGACGGAATGCCGCCTGCATTG
GGCTACGAGCCCGTTCGATGCAAGAATTCCTCTTGCAGAGCCGTATTGAA
CCCCTATTGTGGGACTTTACAGCGTTGGAAGAGCACGATGGTCTTCGATT
TTCGTGGAACGTGTGGCCCTCCTCTTCGACAGAGGCAGCAGATTCGGTGG
TGCCGCTGGGGTGCTTGTACACCCCATTGAAGCAAATCGACGGAATGCCG
CCTGCATTGGGCTACGAGCCCGTTCGATGCAAGAATTCCTCTTGCAGAGC
CGTATTGAACCCCTATTGTTCGATCGACTTCAACACCAAGCTGTGGAGCT
GTCCGTTCTGCACGACGCGGAACTCGTTTCCGCCAGCGTACGCTAGCGCG
ATTTCGGAGACGAATCTTCCTGCGGAGCTGATTCCTGACTACACGACGGT
GGAGTACCAGTTGCCGGGCCAGGACAAGGGCGCGCCCTCGTTTCTGTTCG
TGGTGGACACGTGTCTGCCGGCGAAAGAGCTGGAGGAGCTTCGGGATTCG
CTGCAGCAGTCTTTGGCGCTTCTGCCCCCAAAAGCTCGCGTGGGCCTGGT
GACCTTCTTCGATCGACTTCAACACCAAGCTGTGGAGCTGTCCGTTCTGC
ACGACGCGGAACTCGTTTCCGCCAGCGTACGCTAGCGCGATTTCGGAGAC
GAATCTTCCTGCGGAGCTGATTCCTGACTACACGACGGTGGAGTACCAGT
TGCCGGGCCAGGACAAGGGCGCGCCCTCGTTTCTGTTCGTGGTGGACACG
TGTCTGCCGGCGAAAGAGCTGGAGGAGCTTCGGGATTCGCTGCAGCAGTC
TTTGGCGCTTCTGCCCCCAAAAGCTCGCGTGGGCCTGGTGACCTTC
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