mRNA_M-pyrifera_M_contig79798.18720.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79798.18720.1 vs. uniprot
Match: D8LI15_ECTSI (Folate/biopterin transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI15_ECTSI) HSP 1 Score: 201 bits (512), Expect = 9.080e-60 Identity = 93/111 (83.78%), Postives = 105/111 (94.59%), Query Frame = 1 Query: 1 RTQRESVSNMGNIQASGYIARYFGSALGAIGGAVLYNRDTWGWGLSISTLFWINGLIPLVLVLPLMPYLYEEKKPRETGVFKRHTEELWTLVQKRAVWRPMIFVYLYNALM 333 +TQRES+SNMGNIQASGYIARYFGSA+GA+GGAVLYN+DTWGWGL+IS LFWIN L+PLVLV+PLMP+L E+KKPRE GV KRH++ELWTLVQK AVWRPMIFVYLYNALM Sbjct: 248 KTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVMPLMPFLLEDKKPREKGVLKRHSDELWTLVQKTAVWRPMIFVYLYNALM 358
BLAST of mRNA_M-pyrifera_M_contig79798.18720.1 vs. uniprot
Match: A0A835YTY0_9STRA (Folate/biopterin transporter n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTY0_9STRA) HSP 1 Score: 129 bits (325), Expect = 6.240e-33 Identity = 61/115 (53.04%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 1 RTQRESVSNMGNIQASGYIARYFGSALGAIGGAVLYNRDTWGWGLSISTLFWINGLIPLVLVLPLMPYLYEEKK---PRETGVFKRHTEELWTLVQKRAVWRPMIFVYLYNALMV 336 RT+ ES + G +QASGYIAR FGSA+G+ GA++YN+ WGWGLSI+ + IN ++PL V P +PYL E K P V++ H +E+W LVQKR VW+PM FVY+YNA+M+ Sbjct: 231 RTKLESTKHRGTVQASGYIARAFGSAVGSTAGALVYNQANWGWGLSIAQIMLINAVVPLACVSPFIPYLKETVKTSLPTARHVWRTHWQEIWALVQKRVVWQPMTFVYIYNAMMI 345
BLAST of mRNA_M-pyrifera_M_contig79798.18720.1 vs. uniprot
Match: A0A6V1WMI5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WMI5_HETAK) HSP 1 Score: 106 bits (265), Expect = 1.130e-24 Identity = 53/114 (46.49%), Postives = 72/114 (63.16%), Query Frame = 1 Query: 1 RTQRESVSNMGNIQASGYIARYFGSALGAIGGAVLYNRDTWGWGLSISTLFWINGLIPLVLVLPLMPYLYE--EKKPRETGVFKRHTEELWTLVQKRAVWRPMIFVYLYNALMV 336 R+Q ES G IQA GYI R+ GS LG+ GAVLYNRDTWGWGL+ +F +N +P V++ P M YL + + KP + R E+W VQKR +W+PM F++ YN + + Sbjct: 186 RSQHESDDERGTIQAQGYIIRFVGSILGSAMGAVLYNRDTWGWGLTTPQMFALNAFVPFVVLYPAMAYLRDASDLKPIPVPIQCR---EIWGAVQKRNIWQPMAFIFAYNVMQI 296
BLAST of mRNA_M-pyrifera_M_contig79798.18720.1 vs. uniprot
Match: A0A7S1FNC7_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNC7_9STRA) HSP 1 Score: 105 bits (261), Expect = 5.460e-24 Identity = 50/110 (45.45%), Postives = 74/110 (67.27%), Query Frame = 1 Query: 1 RTQRESVSNMGNIQASGYIARYFGSALGAIGGAVLYNRDTWGWGLSISTLFWINGLIPLVLVLPLMPYLYEEKKPRETGVFKRHTEELWTLVQKRAVWRPMIFVYLYNAL 330 R+ ES+ N G +Q+ GYI R+FGS +GA GAV+YN+D W + L IS +F+IN P++ +LPL+P+L E + E F ++L+ Q +AVW+PM FVY+YNA+ Sbjct: 419 RSAYESLENRGQMQSKGYIVRFFGSVIGATIGAVVYNKDDWKFYLPISLVFFINAAFPMIFLLPLVPFLMEIETQCEPRNFVTQCKDLFHTAQLKAVWQPMTFVYIYNAM 528
BLAST of mRNA_M-pyrifera_M_contig79798.18720.1 vs. uniprot
Match: A0A1Z5K9Z9_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9Z9_FISSO) HSP 1 Score: 103 bits (258), Expect = 1.370e-23 Identity = 51/110 (46.36%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 1 RTQRESVSNMGNIQASGYIARYFGSALGAIGGAVLYNRDTWGWGLSISTLFWINGLIPLVLVLPLMPYLYEEKKPRETGVFKRHTEELWTLVQKRAVWRPMIFVYLYNAL 330 R++ ES G +Q+ GYI R+FGS +GA GA++YN+D W W L I +F+IN PL+ +LP +PYL E + F EL+ Q RAVW+PM FVY+YNAL Sbjct: 335 RSRYESQEKRGTMQSKGYIVRFFGSTVGATIGALVYNKDDWDWSLPIRLIFFINAAFPLIFLLPFVPYLLELETDCLPKNFWDQCRELFHTAQLRAVWQPMTFVYVYNAL 444
BLAST of mRNA_M-pyrifera_M_contig79798.18720.1 vs. uniprot
Match: W7TKM6_9STRA (Folate biopterin transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKM6_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 4.910e-21 Identity = 44/112 (39.29%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 1 RTQRESVSNMGNIQASGYIARYFGSALGAIGGAVLYNRDTWGWGLSISTLFWINGLIPLVLVLPLMPYLYEEKKPRETGVFKRHTEELWTLVQKRAVWRPMIFVYLYNALMV 336 R++ E +G++Q+ GY+ARY G+ +GA G +LYN W WGLSIS+++ +NGL +VLVLP +L + + E K ++W +VQ+R ++ PM F+ +YN L++ Sbjct: 257 RSKLEPEGRVGHMQSVGYVARYVGNVVGATLGTILYNEKEWHWGLSISSIYLLNGLAAVVLVLPFTYHLSDPNQVLEARSLKEQLGDIWKMVQRRTIYVPMSFIAVYNMLLI 368
BLAST of mRNA_M-pyrifera_M_contig79798.18720.1 vs. uniprot
Match: A0A7S2XY88_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY88_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 7.950e-21 Identity = 45/112 (40.18%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 1 RTQRESVSNMGNIQASGYIARYFGSALGAIGGAVLYNRDTWGWGLSISTLFWINGLIPLVLVLPLMPYLYEEKKPRETGVFKRHTEELWTLVQKRAVWRPMIFVYLYNALMV 336 R + E + G QA+ Y R+ GS G +GG +LYN WGWGL+ + +NG++PLV++LPL+ L+E + + V + +++W +++RAVW+PM F+YLYN L V Sbjct: 174 RGRTEEEGSKGQAQATCYAVRFGGSVAGCLGGTLLYNSTNWGWGLTFPQVCLVNGVLPLVVLLPLLIPLWERQGSQGKSV-PQQCKDVWGTIEQRAVWQPMAFIYLYNLLQV 284
BLAST of mRNA_M-pyrifera_M_contig79798.18720.1 vs. uniprot
Match: D7FZP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZP1_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 8.690e-21 Identity = 42/108 (38.89%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 1 RTQRESVSNMGNIQASGYIARYFGSALGAIGGAVLYNRDTWGWGLSISTLFWINGLIPLVLVLPLMPYLYEEKKPRETGVFKRHTEELWTLVQKRAVWRPMIFVYLYN 324 R + E+ + G +QA+ Y R+ G+ +G +GGA+L+NR WGWGL+ + I ++P++++ P + YL+EE+ GV K ++W +Q +AVWRPM FVY++N Sbjct: 215 RARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNRGAWGWGLTFRQVCLIMSMMPVLVLGPAVVYLWEERSKETKGV-KNQVRDIWDTIQLQAVWRPMAFVYIFN 321
BLAST of mRNA_M-pyrifera_M_contig79798.18720.1 vs. uniprot
Match: A0A7S1TWA3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWA3_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 9.740e-19 Identity = 45/114 (39.47%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 1 RTQRESVSNMGNIQASGYIARYFGSALGAIGGAVLYNRDTWGWGLSISTLFWINGLIPLVLVLPLMPYLYEEKKPRETGV--FKRHTEELWTLVQKRAVWRPMIFVYLYNALMV 336 R++ E G +QA+ Y R+FGS LGA G ++YN+D WGWGLS + + ++ G+ PL+ V+P Y+ EK E G ++W V AVW PM FVY+YN + + Sbjct: 265 RSRYEPSEGRGQMQATCYALRFFGSVLGAGTGTLVYNKDAWGWGLSFAQVCFVLGVFPLLFVVP-FAYMVWEKPLSEAGAKSVPEQCRDIWNTVTLDAVWMPMTFVYIYNVMQI 377
BLAST of mRNA_M-pyrifera_M_contig79798.18720.1 vs. uniprot
Match: A0A1V9YZE5_9STRA (Folate-Biopterin Transporter (FBT) family n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YZE5_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 8.030e-17 Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = 1 Query: 1 RTQRESVSNMGNIQASGYIARYFGSALGAIGGAVLYNRDTWGWGLSISTLFWINGLIPLVLVLPLMPYLYEEKKPRETGVFKRHTEELWTLVQKRAVWRPMIFVYLYNAL 330 R E VS G +Q++ Y+ R+ +G G++L NRDTWGWGLS+S F I ++PL+L +P + Y +E F+ +W ++Q RA W+P+ F+ YN L Sbjct: 157 RAMNEPVSQRGQVQSAIYMIRFLTEMVGYWLGSILSNRDTWGWGLSMSQCFAILAILPLILAIPFI-YCLDEPVVTHVQPFQEQLLTIWKMLQLRATWQPLAFLIFYNTL 265 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79798.18720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79798.18720.1 >prot_M-pyrifera_M_contig79798.18720.1 ID=prot_M-pyrifera_M_contig79798.18720.1|Name=mRNA_M-pyrifera_M_contig79798.18720.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp MGNIQASGYIARYFGSALGAIGGAVLYNRDTWGWGLSISTLFWINGLIPLback to top mRNA from alignment at M-pyrifera_M_contig79798:142..477- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79798.18720.1 ID=mRNA_M-pyrifera_M_contig79798.18720.1|Name=mRNA_M-pyrifera_M_contig79798.18720.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=336bp|location=Sequence derived from alignment at M-pyrifera_M_contig79798:142..477- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79798:142..477- >mRNA_M-pyrifera_M_contig79798.18720.1 ID=mRNA_M-pyrifera_M_contig79798.18720.1|Name=mRNA_M-pyrifera_M_contig79798.18720.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig79798:142..477- (Macrocystis pyrifera P11B4 male)back to top |