mRNA_M-pyrifera_M_contig7978.18719.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7978.18719.1 vs. uniprot
Match: A0A6H5KWS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS7_9PHAE) HSP 1 Score: 375 bits (964), Expect = 4.200e-115 Identity = 211/327 (64.53%), Postives = 231/327 (70.64%), Query Frame = 1 Query: 1 GAVQMSPGFHALAAAAVGDGLAMGTSGGXXXXXXXXXSRMLSPTSGAAAVAATAEAMGAVKGMKLLQYFRAHTGAVWCAEFSRKGQYLATGGADGLVKIWHIGAPEEDSGAPPNRD--------------RGRGASGSPPPRFIG-LERCDSDVSLASVASVVSVANTA---CGSTFDCQVAPPPVPSGELVIGGRASRVMRGHSGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGSATPTSCAFHPRLENSFATAGEDGKIRVWKITSAKVEAEVQMPTRTTHVRFSPDGRILAAGMMGGQVRFLTSDSLHPLAQV 927 G +Q+SPG+ ALAAAA G GG SR LSP SGA A A EA KGMK+LQ+F+AH GAVWCAEFSRKGQYLATGGADGLVKIW IG E+ S + D S RF G LER DSDVSLAS GST DCQ PP+ GELVIGGRASRVMRGH+GDVVDLSWS NAFLLSAGRDGSLRLWHP RLGCVHLFPQTG+ATPTSC+F+PRLENSFAT GEDGK+RVWKITSAKVEAEVQ+P R THVRFSPDG+ LAAGM+GGQVRF+TS+SL P+AQV Sbjct: 965 GELQLSPGYQALAAAA------NGRPGGGGSGFVSPTSRGLSPESGAVAEAEAVEAXXXXKGMKMLQHFKAHVGAVWCAEFSRKGQYLATGGADGLVKIWDIGVEEDGSRELDSSDGXXXXXXXXXXXXXXXXXXXXSAGARFTGRLERSDSDVSLASXXXXXXXXXXXXXXAGSTSDCQDPVPPLRRGELVIGGRASRVMRGHNGDVVDLSWSLNAFLLSAGRDGSLRLWHPARLGCVHLFPQTGAATPTSCSFNPRLENSFATGGEDGKVRVWKITSAKVEAEVQLPNRATHVRFSPDGKALAAGMVGGQVRFMTSESLQPMAQV 1285
BLAST of mRNA_M-pyrifera_M_contig7978.18719.1 vs. uniprot
Match: D8LMN8_ECTSI (WD repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN8_ECTSI) HSP 1 Score: 373 bits (957), Expect = 4.380e-115 Identity = 212/337 (62.91%), Postives = 237/337 (70.33%), Query Frame = 1 Query: 1 GAVQMSPGFHALAAAAVGDGLAMGTSGGXXXXXXXXXSRMLSPTSGAAAVAATAEAMGAVKGMKLLQYFRAHTGAVWCAEFSRKGQYLATGGADGLVKIWHIGAPEEDSGAPPNRDRGRGA----------------SGSPPPRFIG-LERCDSDVSLASVASVVSVAN---TACGSTFDCQVAPPPVPSGELVIGGRASRVMRGHSGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGSATPTSCAFHPRLENSFATAGEDGKIRVWKITSAKVEAEVQMPTRTTHVRFSPDGRILAAGMMGGQVRFLTSDSLHPLAQVR-SGGRGR 948 G +Q+SPG+ ALAAAA G GG SR LSP SGA A A E GMK+LQ+F+AH GAVWCAEFSRKGQYLATGGADGLVKIW IG E+ S A + +G+ RF G LER DSDVSLASV +A GSTFDCQ PP+ GELV+GGRASRVMRGH+GDVVDLSWS NAFLLSAGRDGSLRLWHP RLGCVHLFPQTG+ATPTSC+F+PRLENSFAT GEDGK+RVWKITSAKVEA Q+P R THVRFSPDG+ LAAGM+GGQVRF+TS+SL P+AQV +G GR Sbjct: 679 GELQLSPGYQALAAAA------NGRPGGGGNGFASPTSRGLSPESGAVAEAEAVEXXXXXXGMKMLQHFKAHVGAVWCAEFSRKGQYLATGGADGLVKIWDIGVEEDGSRALDSSXXXXXXXXXXXXXXXXXXXXXXAGA---RFTGRLERSDSDVSLASVXXXXXXXXXXPSAAGSTFDCQDPVPPLRRGELVVGGRASRVMRGHNGDVVDLSWSLNAFLLSAGRDGSLRLWHPARLGCVHLFPQTGAATPTSCSFNPRLENSFATGGEDGKVRVWKITSAKVEAVAQLPNRATHVRFSPDGKALAAGMVGGQVRFMTSESLQPMAQVLVNGANGR 1006
BLAST of mRNA_M-pyrifera_M_contig7978.18719.1 vs. uniprot
Match: A0A804J7B4_MUSAM ((wild Malaysian banana) hypothetical protein n=3 Tax=Musa TaxID=4640 RepID=A0A804J7B4_MUSAM) HSP 1 Score: 116 bits (290), Expect = 3.550e-25 Identity = 77/241 (31.95%), Postives = 115/241 (47.72%), Query Frame = 1 Query: 199 QYFRAHTGAVWCAEFSRKGQYLATGGADGLVKIWH-IGAPEEDSGAPPNRDRGRGASGSPPPRFIGLERCDSDVSLASVASVVSVANTACGSTFD--CQVAPPPVPSGELVIGGRASRVMRGHSGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGSATPTSCAFHPRLENSFATAGEDGKIRVWKITSAKVEAEVQMPTRTTHVRFSPDGRILAAGMMGGQVRFLTSDSLH 912 Q +AH GA+ +FS G+YLATGGADG+V++WH + +D + P+ D P +++++ + T D C V PP V + + RGH DV+DLSWS N LLS+ +D ++RLW G C+ +F T T F+P EN F + DGKIR+W ++ +V V + T + + P G+ LA G + G RF + H Sbjct: 256 QDIKAHDGAILAMKFSPDGRYLATGGADGIVRVWHAMECERKDEFSIPDDD---------PSCLYFTVNHNAELTPVRADKEKKPKSKRTRRTADSACVVIPPHV----FRLSEKPVHEFRGHDADVLDLSWSMNQLLLSSSKDKTVRLWQVGSDRCLKVFSHTNYVTCVQ--FNPMNENYFVSGSIDGKIRIWDVSGCQVVDWVYIREIVTAIGYHPKGKRLAIGTLKGNCRFYDASDTH 481
BLAST of mRNA_M-pyrifera_M_contig7978.18719.1 vs. uniprot
Match: J3M0H9_ORYBR (Uncharacterized protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3M0H9_ORYBR) HSP 1 Score: 114 bits (284), Expect = 2.050e-24 Identity = 81/250 (32.40%), Postives = 118/250 (47.20%), Query Frame = 1 Query: 199 QYFRAHTGAVWCAEFSRKGQYLATGGADGLVKIWHIGAPEEDSGAPPNRDRGRGASGSPPPRFIGLERCDSDVSLASVASVVSVANTACGSTFDCQVAPPPVPSGELVIGGRASRVMRGHSGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGSATPTSCAFHPRLENSFATAGEDGKIRVWKITSAKVEAEVQMPTRTTHVRFSPDGRILAAGMMGGQVRF--LTSDSLHPLAQVRSGGR 942 Q +AH GA+ +FS GQ LATGG DG+V++W + +D P + P + L + LA V + G + A +P+ I RGHSGDV+DLSWS + LLSA D ++R+W G C+ ++P + T F+P EN F + DGKIRVW I + V V + T VR+ PDG+++ G + G RF L+ + L Q+ G+ Sbjct: 220 QVIKAHDGAILTMKFSPDGQLLATGGEDGVVRVWSV-MQSKDCKIPLDD-----------PSCVYL-KARHKYELAPVNIENGKKSKINGLKKSAEPACIVIPTVVFQISEEPLHEFRGHSGDVLDLSWSSDKHLLSASTDKTVRMWEMGCANCIRVYPHSNFVTCVQ--FNPVDENFFISGSIDGKIRVWDIPGSSVVDWVDIRDIVTAVRYRPDGKLVVVGTITGNCRFYELSDNLLQLKTQIALNGK 454
BLAST of mRNA_M-pyrifera_M_contig7978.18719.1 vs. uniprot
Match: UPI001929C1DE (LOW QUALITY PROTEIN: 2-deoxy-glucose resistant protein 2-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929C1DE) HSP 1 Score: 113 bits (283), Expect = 2.750e-24 Identity = 82/238 (34.45%), Postives = 110/238 (46.22%), Query Frame = 1 Query: 199 QYFRAHTGAVWCAEFSRKGQYLATGGADGLVKIWHIGAPEEDSGAPPNRDRGRGASGSPPPRFIGLERCDSDVSL-ASVASVVSVANTACGSTFDCQVAPPPVPSGELVIGGRASRVMRGHSGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGSATPTSCAFHPRLENSFATAGEDGKIRVWKITSAKVEAEVQMPTRTTHVRFSPDGRILAAGMMGGQVRFL-TSDS 906 Q +AH GA+ +FS GQ+LA+GG DG+V++W + E D G P + + + V L A S C V PP V I RGH GDV+DLSWS N +LLS+ D ++RLW G GCV +F + T F+P EN F + DGKIR+W I+ +V + T V + PDG+ G M G RF TSD+ Sbjct: 217 QDIQAHEGAILTMKFSPDGQFLASGGEDGVVRVWRVMECERS-------DDDDLLEGDPSCVYFRVNQNSELVPLYADKEKKSKFKGVRRSSDSACVVVPPNV----FRISEEPIHEFRGHDGDVLDLSWSKNQYLLSSSDDKTVRLWRVGFNGCVKVFSHSNYVT--CIQFNPMDENYFISGSIDGKIRIWDISRCRVVDWTDVKEIVTAVCYRPDGKGGVVGTMTGDCRFYDTSDN 441
BLAST of mRNA_M-pyrifera_M_contig7978.18719.1 vs. uniprot
Match: A0A0N4UBY5_DRAME (WD repeat-containing protein 44 n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A0N4UBY5_DRAME) HSP 1 Score: 112 bits (280), Expect = 8.100e-24 Identity = 77/244 (31.56%), Postives = 117/244 (47.95%), Query Frame = 1 Query: 214 HTGAVWCAEFSRKGQYLATGGADGLVKIWHIGAPEEDSGAPPNRDRGRGASGSPPPRFIGLERCDSDVSLASVASVVSVANTACGSTFDCQVAPPPVPSGELVIGGRASRVMRGHSGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGSATPTSCAFHPRLENSFATAGEDGKIRVWKITSAKVEA--EVQMPTRTTHVRFSPDGRILAAGMMGGQVRFLTSDSL--HPLAQVRS 933 HTGAVWC +FS G+ LAT G D ++++W + + A N+ R R S + L ++ + ++ G++ D P S V+ + RGH+ DV+D+SWS N F+LS+G D +++LWH R C+ F T AF P+ + F + DGK+R+W I KV EV+ T + F +G+ A G G+ F T+D L H + VRS Sbjct: 563 HTGAVWCMKFSLCGRLLATAGQDNIIRVWVL----RNHLAYFNKMRDRYNSQLKSSN-VSLNETSLQKAMQEIEKDYHSSSNTLGNSVDSSDDDPNADSTFFVMAPKPLCSYRGHTADVLDISWSRNYFILSSGMDRTVKLWHLSRAECLCCFQHIDFVT--CIAFMPKDDRYFLSGSLDGKLRLWHIPDKKVALWNEVEQVKFITAIAFVKNGKFAAVGTYDGRCFFYTTDQLKYHTVIDVRS 799
BLAST of mRNA_M-pyrifera_M_contig7978.18719.1 vs. uniprot
Match: I2G540_USTH4 (Uncharacterized protein n=3 Tax=Ustilago TaxID=5269 RepID=I2G540_USTH4) HSP 1 Score: 111 bits (278), Expect = 1.340e-23 Identity = 79/233 (33.91%), Postives = 112/233 (48.07%), Query Frame = 1 Query: 229 WCAEFSRKGQYLATGGADGLVKIWHIGAP-----EEDSGAPPNRDRGRGASGSPPPRFIGLERCDSDVSLASVASVVSVANTACGSTFDCQVAPPPVPSGELVIGGRASRVMRGHSGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGSATPTSCAFHPRLENSFATAGEDGKIRVWKITSAKVEAEVQMPTRTTHVRFSPDGRILAAGM-MGGQVRFLTSDSL 909 + +FS G+YLA G+D L++++ + A EE A P R + C +S A S VS +T + D + P V RV HSGDV+DLSWS N FLLS D + +LWHP R C+ F +AT +S FHP + F T G DGK+R+W IT+ +V++ +P T V FS G+++ G G + F SD+L Sbjct: 325 YALQFSLDGRYLAAAGSDHLIRVYEVIASHNERAEEIELAQPQRTE---------------DFCTRKLSAACPTSSVSSRST---TKSDIRTGTPDFAP---VFRSVPVRVFAAHSGDVLDLSWSKNNFLLSCSSDKTAKLWHPNRSECLCTFAT--AATVSSVDFHPTDDRFFVTGGLDGKLRLWNITARRVQSVHDIPGVITAVAFSSSGQVVCVGTHSGSMITFSCSDTL 534
BLAST of mRNA_M-pyrifera_M_contig7978.18719.1 vs. uniprot
Match: UPI001F5CF657 (WD repeat-containing protein 44-like isoform X1 n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5CF657) HSP 1 Score: 110 bits (275), Expect = 3.280e-23 Identity = 82/266 (30.83%), Postives = 110/266 (41.35%), Query Frame = 1 Query: 199 QYFRAHTGAVWCAEFSRKGQYLATGGADGLVKIWHIGA------PEEDSGAPPNRDRGRGASGSPPPRFIGLERCDSDVS-LASVASVVSVANTACGSTFDCQVAPPPVPSGELVIGGRASRVMRGHSGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTG----------------------------SATPTSCAFHPRLENSFATAGEDGKIRVWKITSAKVEAEVQMPTRTTHVRFSPDGRILAAGMMGGQVRF 891 Q +AH GA+ +FS GQ+LATGG DG+V++W + P +D + R R GL D L V S+ ++AC +P+ I GHSGDV+DLSWS N LLSA D ++RLW G C+ +FP + + T F P +NSF T DGK+RVW IT V V + T V + PDG+ G + G RF Sbjct: 249 QVIKAHDGAILTMKFSPDGQFLATGGEDGVVRVWSVSQSDDCKIPTDDPSCVYLKSR----------RKHGLTPVSVDTEKLCKVKSMKKTGDSAC----------IVIPASVFHISEEPLHEFFGHSGDVLDLSWSNNKHLLSASTDKTVRLWEIGSANCISVFPHSNFGKLIVSYILCFKAYVFTYGLKLTVCFPCSAVTCVQFDPTNDNSFITGSIDGKVRVWDITRGSVADWVDVRDIVTAVCYRPDGKGAVVGTITGNCRF 494
BLAST of mRNA_M-pyrifera_M_contig7978.18719.1 vs. uniprot
Match: A0A8J5VG55_ZIZPA (Uncharacterized protein n=2 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5VG55_ZIZPA) HSP 1 Score: 110 bits (275), Expect = 3.330e-23 Identity = 80/238 (33.61%), Postives = 112/238 (47.06%), Query Frame = 1 Query: 199 QYFRAHTGAVWCAEFSRKGQYLATGGADGLVKIWHIGAPEEDSGAPPNRD-----RGRGASGSPPPRFIGLERCDSDVSLASVASVVSVANTACG--STFDCQVAPPPVPSGELVIGGRASRVMRGHSGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGSATPTSCAFHPRLENSFATAGEDGKIRVWKITSAKVEAEVQMPTRTTHVRFSPDGRILAAGMMGGQVRF 891 Q +AH GA+ +FS GQ+LA+GG DG+VK+W + ED P + + R G P ++ ++ + A +AC T Q++ PV RGHSGDV+DLSWS + LLSA D ++RLW G CV +FP + T F+P EN F + DGKIRVW I + V V + T + + PDG+ G + G RF Sbjct: 306 QVIKAHDGAIVTMKFSPDGQFLASGGEDGIVKVWTV-MQSEDCKIPLDDPSCVYLKARHKYGLAPVNVENEKKM-------KISGLKKSAESACIVIPTMAFQISEEPV------------HEFRGHSGDVLDLSWSSDKHLLSASTDKTVRLWKIGSAKCVRVFPHSNFVTCVQ--FNPVDENFFISGSIDGKIRVWDILESSVVDWVDIRDILTAICYRPDGKGAVVGTITGNCRF 521
BLAST of mRNA_M-pyrifera_M_contig7978.18719.1 vs. uniprot
Match: A0A388JNN9_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JNN9_CHABU) HSP 1 Score: 110 bits (275), Expect = 4.110e-23 Identity = 81/260 (31.15%), Postives = 115/260 (44.23%), Query Frame = 1 Query: 187 MKLLQYFRAHTGAVWCAEFSRKGQYLATGGADGLVKIWHIGAPEEDSGAPPNRDRGRGASGSPPPRFIGLE-RCDSDV---------SLASVASVVSVANTACGSTFDCQVAPPPVP--------SGELVIGGRASRVMRGHSGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGSATPTSCAFHPRLENSFATAGEDGKIRVWKITSAKVEAEVQMPTRTTHVRFSPDGRILAAGMMGGQVRFLTSDSLH 912 +KL Q RAH GA+W +FSR G+Y+A+ G D +VK+W I P + RG GAS G R D + S +S S S+ + GS P P G I RV +GH+GDV+D+SWS + FLL++ D S+RLWH C+ +FP + T F+P + F + D K+R+W I V + T ++ DG+ G G RF + H Sbjct: 960 LKLGQELRAHDGAIWTIKFSRDGKYMASAGQDKIVKVWLI-----LDRKPSSNTRGSGASXXXXXXXXGRTCRADDECEVGNSGRLSSSSSSGSCHSLGSNGNGSRLGGXXXSAPAPPGATAGSWGGSFYIQETPHRVFKGHTGDVLDMSWSKSQFLLTSSMDNSVRLWHISVDQCLRVFPHSDFVTCVD--FNPVDDKFFISGSFDDKLRIWNIPDFSVADWTDVREIVTTACYTRDGKGAIVGSHKGICRFYSITGNH 1212 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7978.18719.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7978.18719.1 >prot_M-pyrifera_M_contig7978.18719.1 ID=prot_M-pyrifera_M_contig7978.18719.1|Name=mRNA_M-pyrifera_M_contig7978.18719.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=312bp MSPGFHALAAAAVGDGLAMGTSGGGGGLGASSASRMLSPTSGAAAVAATAback to top mRNA from alignment at M-pyrifera_M_contig7978:120..3290- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7978.18719.1 ID=mRNA_M-pyrifera_M_contig7978.18719.1|Name=mRNA_M-pyrifera_M_contig7978.18719.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3171bp|location=Sequence derived from alignment at M-pyrifera_M_contig7978:120..3290- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7978:120..3290- >mRNA_M-pyrifera_M_contig7978.18719.1 ID=mRNA_M-pyrifera_M_contig7978.18719.1|Name=mRNA_M-pyrifera_M_contig7978.18719.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1872bp|location=Sequence derived from alignment at M-pyrifera_M_contig7978:120..3290- (Macrocystis pyrifera P11B4 male)back to top |