mRNA_M-pyrifera_M_contig79758.18714.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79758.18714.1
Unique NamemRNA_M-pyrifera_M_contig79758.18714.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig79758.18714.1 vs. uniprot
Match: A0A5A8CKS2_CAFRO (Fe2OG dioxygenase domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CKS2_CAFRO)

HSP 1 Score: 180 bits (456), Expect = 1.740e-48
Identity = 116/296 (39.19%), Postives = 146/296 (49.32%), Query Frame = 1
Query:   16 QLMRELPAGSWEERRNDLYDFEQTDFPAHAPSKSALGEFRTLIYSHGFRSWVEAVTGIAVSSE-CDFSAARYGPGHFLSCHDDDLAERRVAFVYYLVPEDWGVEDGGGLELFDHRRNLSIPGEMKKVLMPRRNSMVLFAVSASSFHQVQEVLAREGRKGDRLSISGWFRGAPLPRPPPHPCL---FRPSSHYTRKM------------------------------EVTEDAGVVGMGMVTPAYLDMENLGM-MQASFQENQFLSLDNFLLPKWYATFYKAMGVQPWQHCGPLNLR 798
            Q   EL  G W  +R DLYDF QTD   HA +  A+   +  +Y   FR W+E VTG+   +E  D SAA+Y  G  L CHDDDL+ R +AF+ YLV EDW  EDGG L+L+D       P  + K L+P+ NS+  FAV+  SFHQV EVL     KG R+SISGWF G   PRP P P     FR  S    ++                              EVT D  ++    V P +L +   G+ MQ  F E+  + L  FL    Y    KAM VQ W   GP +LR
Sbjct:   80 QAKEELLGGEWFRKRVDLYDFLQTDHLRHAGASGAVARIQNALYGPDFRRWIEGVTGLRTLAEPLDTSAAQYAKGGHLLCHDDDLSGRVIAFIVYLVDEDWTAEDGGALDLYDCDPATGFPCAVSKSLVPKWNSLAFFAVTPGSFHQVAEVLT--STKGSRMSISGWFHGKAPPRPGPLPXXVPTFRVPSRVRSRLAPGLLLADGAXXXXXXXXXXXXXXXXXXSEEVTLDLELLSR-WVEPKWLAIAVSGVQMQEHFAEHGSIELAPFLKETAYGAALKAMRVQSWIAVGPPHLR 372          
BLAST of mRNA_M-pyrifera_M_contig79758.18714.1 vs. uniprot
Match: A0A6J8BZU6_MYTCO (uS12 prolyl 3-hydroxylase n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8BZU6_MYTCO)

HSP 1 Score: 172 bits (435), Expect = 1.330e-46
Identity = 104/267 (38.95%), Postives = 140/267 (52.43%), Query Frame = 1
Query:   13 QQLMRELPAGSWEERRNDLYDFEQTDFPAHAPSKSALGEFRTLIYSHGFRSWVEAVTGIAVSSECDFSAARYGPGHFLSCHDDDLAERRVAFVYYLVPEDWGVEDGGGLELFDHRRNLSIPGEMKKVLMPRRNSMVLFAVSASSFHQVQEVLAREGRKGDRLSISGWFRGAPLPRPPPH---PCLFRPSSHYTRKMEVTEDAGVVGMGMVTPAYLDMENLGMMQASFQENQFLSLDNFLLPKWYATFYKAMGVQ--PWQHCGPLNLR 798
            QQL  EL   +++E+ NDLY F Q+        +  +   R+LIY    + W+  +TGI +    D S A+Y     L CHDD+L +RR+AF+YYLVPE W  EDGG L+LFD   N   P    K ++P RN+   F V+A SFHQV EVL  +     RLSISGWF G P+ RP P+   P   +PS        V ED   +    + PAYLD      +Q  F+E+  + L +FLLP+ Y      +      W+  GP N R
Sbjct:   83 QQLQEELSELTFKEKNNDLYKFYQSKEDLKVVDRPCINALRSLIYKD-LKEWITDITGIELIDTVDLSCAKYQYTDTLLCHDDELDDRRIAFIYYLVPEKWTKEDGGALDLFDVNEN-GQPDATVKSILPVRNNFAFFEVNAVSFHQVAEVLTEDKT---RLSISGWFHGPPVKRPEPYVESPVTLQPSG------SVDED---IFYEWINPAYLDPVTQSEIQEKFEEDSEIELTDFLLPEKYEELKSVIQETNLEWKKKGPANKR 335          
BLAST of mRNA_M-pyrifera_M_contig79758.18714.1 vs. uniprot
Match: E9G930_DAPPU (uS12 prolyl 3-hydroxylase n=5 Tax=Daphnia TaxID=6668 RepID=E9G930_DAPPU)

HSP 1 Score: 164 bits (415), Expect = 1.790e-43
Identity = 99/267 (37.08%), Postives = 143/267 (53.56%), Query Frame = 1
Query:   16 QLMRELPAGSWEERRNDLYDFEQTDFPAHAPSKSALGEFRTLIYSHGFRSWVEAVTGIAVSSECDFSAARYGPGHFLSCHDDDLAERRVAFVYYLVPEDWGVEDGGGLELF--DHRRNLSIPGEMKKVLMPRRNSMVLFAVSASSFHQVQEVLAREGRKGDRLSISGWFRGAPLPRPPPHPCLFRPSSHYTRKMEVTEDAGVVGMGMVTPAYLDMENLGMMQASFQENQFLSLDNFLLPKWYATFYKAM---GVQPWQHCGPLNLRS 801
            QL  EL + ++ E+ NDLY F Q+       + +A+   +  +Y+  FR W+  VTGI +++  D S ARY     L CHDD+L  RR+A++ YLV EDW   DGG L+L+  D R+    P  +   L+P  NS+  FAV+ +SFHQV EVLA    K  RLS+SGWF G P  RPP +     P  H ++  ++ ED        ++PAYLD    G +Q++F +   + L  F+ P  Y    +A+       W   GP N R+
Sbjct:   91 QLKHELLSLNFHEKSNDLYKFHQSQ-DLKKVTTAAVSALKKFLYTD-FRQWLIQVTGIELNATVDMSCARYNHTDVLLCHDDELEGRRIAYILYLVDEDWTSADGGNLDLYSVDERKQ---PDRIVTSLLPVWNSLAFFAVTPTSFHQVSEVLAASSNKC-RLSVSGWFHGKPFKRPPTY---VEPVKHLSKPEDMDEDDFYT---WISPAYLDPSTQGDVQSTFSDKSEIQLQEFIQPDKYGKLCEALHSIDASDWITQGPANKRN 345          
BLAST of mRNA_M-pyrifera_M_contig79758.18714.1 vs. uniprot
Match: A0A8B6FPA5_MYTGA (uS12 prolyl 3-hydroxylase n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6FPA5_MYTGA)

HSP 1 Score: 162 bits (411), Expect = 4.780e-43
Identity = 101/267 (37.83%), Postives = 137/267 (51.31%), Query Frame = 1
Query:   13 QQLMRELPAGSWEERRNDLYDFEQTDFPAHAPSKSALGEFRTLIYSHGFRSWVEAVTGIAVSSECDFSAARYGPGHFLSCHDDDLAERRVAFVYYLVPEDWGVEDGGGLELFDHRRNLSIPGEMKKVLMPRRNSMVLFAVSASSFHQVQEVLAREGRKGDRLSISGWFRGAPLPRPPPH---PCLFRPSSHYTRKMEVTEDAGVVGMGMVTPAYLDMENLGMMQASFQENQFLSLDNFLLPKWYATFYKAMGVQ--PWQHCGPLNLR 798
            QQL  EL   ++ E+ NDLY F Q+           +   R+LIY    + W+  +TGI +    D S A+Y     L CHDD+L +RR+AF+YYLVPE W  EDGG L+LF+   N   P    K ++P RN+   F V+A S+HQV EVL  +     RLSISGWF G P+ RP P+   P    PS        V E+        + PAYLD      +Q  F+++  + L +FLLP+ Y     A+      W+  GP N R
Sbjct:   83 QQLQEELSELTFTEKNNDLYKFYQSKEDLKVVDLPYINALRSLIYKD-LKEWITDITGIELVDTVDLSCAKYQYTDTLLCHDDELDDRRIAFIYYLVPEKWTKEDGGALDLFNVNEN-GQPDATVKSILPVRNNFAFFEVNAVSYHQVAEVLTEDKT---RLSISGWFHGPPVERPEPYVESPVTLHPSR------SVDENTFY---DWINPAYLDPVTQSEIQEKFEDDSEIELTDFLLPEKYEELKTAIQETNLEWKRKGPANKR 335          
BLAST of mRNA_M-pyrifera_M_contig79758.18714.1 vs. uniprot
Match: A0A6P4Y8L7_BRABE (prolyl 3-hydroxylase OGFOD1-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Y8L7_BRABE)

HSP 1 Score: 158 bits (399), Expect = 3.850e-42
Identity = 99/264 (37.50%), Postives = 142/264 (53.79%), Query Frame = 1
Query:   16 QLMRELPAGSWEERRNDLYDFEQTDFPAHAPSKSALGEFRTLIYSHGFRSWVEAVTGIAVSSECDFSAARYGPGHFLSCHDDDLAERRVAFVYYLVPEDWGVEDGGGLELFDHRRNLSIPGEMKKVLMPRRNSMVLFAVSASSFHQVQEVLAREGRKGDRLSISGWFRGAPLPRPPPHPCLFRPSSHYTRK-MEVTEDAGVVGMGMVTPAYLDMENLGMMQASFQENQFLSLDNFLLPKWYATFYKAMGVQP--WQHCGPLNLR 798
            +L  +L   ++  + NDLY F+QT+    A S+S +G F +L+     R+W+  VTGI ++ +   +++ Y     L CHDD+L ERR+AF+ YL P  W + DGG L+LF        P ++ K L+P R+S+V F V+ASSFHQV EVLA + R   RLS+ GWF G PL RP P P    P   +T    ++ ED        V P Y D E L  +Q  F++N  + L++FL          A+  +   W   GP N R
Sbjct:   79 ELETDLSQLAFNTKSNDLYSFKQTNDLKTADSQS-VGAFVSLL-KEKMRNWLVEVTGIPLNDKVGITSSIYEHTDTLLCHDDELEERRIAFILYLTPPSWTMADGGTLDLFSSSEGRLQPEKVVKSLLPTRSSLVFFEVTASSFHQVAEVLATDKR---RLSMGGWFHGPPLARPAPSPEPKVPLKPWTDGYFDMVED-------WVNPLYFDDEVLAQIQQDFEDNSEILLEDFLKEDKVQMITAALQAKDLKWTETGPFNKR 330          
BLAST of mRNA_M-pyrifera_M_contig79758.18714.1 vs. uniprot
Match: A0A8J9ZN02_BRALA (OGFOD1 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZN02_BRALA)

HSP 1 Score: 158 bits (400), Expect = 1.790e-41
Identity = 100/263 (38.02%), Postives = 138/263 (52.47%), Query Frame = 1
Query:   19 LMRELPAGSWEERRNDLYDFEQTDFPAHAPSKSALGEFRTLIYSHGFRSWVEAVTGIAVSSECDFSAARYGPGHFLSCHDDDLAERRVAFVYYLVPEDWGVEDGGGLELFDHRRNLSIPGEMKKVLMPRRNSMVLFAVSASSFHQVQEVLAREGRKGDRLSISGWFRGAPLPRPPPHPCLFRPSSHYTRK-MEVTEDAGVVGMGMVTPAYLDMENLGMMQASFQENQFLSLDNFLLPKWYATFYKAMGVQP--WQHCGPLNLR 798
            L  +L   S+  + NDLY F+QT+    A S S +G F +L+     + W+  VTGI ++ E   +++ Y     L CHDD+L ERR+AF+ Y+ P  W + DGG L+LF        P  + K L+P RNS+V F V+ASSFHQV EVLA + R   RLS+ GWF G PL RP   P    P   +T    ++ ED        V P Y D E L  +Q  F++N  + L++FL      T   A+  +   W   GP N R
Sbjct:   90 LETDLSELSFNTKSNDLYSFKQTNDLKTADSPS-IGAFASLL-KEKMKDWLVEVTGIPLNDEVAITSSIYEHTDTLLCHDDELEERRIAFILYITPPSWTMADGGTLDLFSSSEGRIKPENVVKSLLPTRNSLVFFEVTASSFHQVAEVLATDKR---RLSMGGWFHGPPLARPAQSPEPKVPLKPWTDGYFDMVED-------WVNPLYFDDEVLARIQQDFEDNSEILLEDFLKEDKVQTITTALQAKDLKWTQTGPFNKR 340          
BLAST of mRNA_M-pyrifera_M_contig79758.18714.1 vs. uniprot
Match: UPI00148AC63E (prolyl 3-hydroxylase OGFOD1-like n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148AC63E)

HSP 1 Score: 156 bits (395), Expect = 9.540e-41
Identity = 97/253 (38.34%), Postives = 134/253 (52.96%), Query Frame = 1
Query:   52 ERRNDLYDFEQTDFPAHAPSKSALGEFRTLIYSHGFRSWVEAVTGIAVSSECDFSAARYGPGHFLSCHDDDLAERRVAFVYYLVPEDWGVEDGGGLELFDHRRNLSIPGEMKKVLMPRRNSMVLFAVSASSFHQVQEVLAREGRKGDRLSISGWFRGAPLPRPPPHPCLFRPSSHYTRKMEVTEDAGVVGMGMVTPAYLDMENLGMMQASFQENQFLSLDNFLLPKWY---ATFYKAMGVQPWQHCGPLNLRS 801
            E+ NDLY F Q+           L   R +IY+   R W+  +TGI +S++ D S A Y     LSCHDD+L +RRVAF+YYLVPE W   DGG L+LF    N   P E+ K L+P +NS V F V+ +SFHQV+EVL  +     RLSISGWF G  + RP P+  +  P +  ++ + + ED        + P YLD      ++ +F E   + L NFL    Y   A+    +    W + GP N R+
Sbjct:   97 EKNNDLYKFHQSTEDLKVTKLPNLSAIRDVIYT-SVREWIIKMTGIKLSTQVDMSCAMYRYTDVLSCHDDELDDRRVAFIYYLVPESWNEGDGGRLQLFSLDDN-GEPKEIIKNLIPVQNSFVFFEVTPASFHQVEEVLTEDKT---RLSISGWFHGPRIDRPSPY--VEAPPT-ASQSVSIEEDDFY---SWLNPQYLDSATQASIKETFVEESQIELSNFLQENMYEELASLLSGIDRSKWSNKGPPNKRN 338          
BLAST of mRNA_M-pyrifera_M_contig79758.18714.1 vs. uniprot
Match: UPI000DBC8F50 (prolyl 3-hydroxylase OGFOD1 isoform X2 n=1 Tax=Bubalus bubalis TaxID=89462 RepID=UPI000DBC8F50)

HSP 1 Score: 154 bits (390), Expect = 3.380e-40
Identity = 104/266 (39.10%), Postives = 141/266 (53.01%), Query Frame = 1
Query:   19 LMRELPAGSWEERRNDLYDFEQTDF--PAHAPSKSALGEFRTLIYSHGFRSWVEAVTGIAVSSECDFSAARYGPGHFLSCHDDDLAERRVAFVYYLVPEDWGVEDGGGLELFDHRRNLSIPGEMKKVLMPRRNSMVLFAVSASSFHQVQEVLAREGRKGDRLSISGWFRGAPLPRPPPH--PCLFRPSSHYTRKMEVTEDAGVVGMGMVTPAYLDMENLGMMQASFQENQFLSLDNFLLPKWYATFYKAM--GVQPWQHCGPLNLR 798
            L +EL    + E+ NDLY F+Q+D       P   AL   R +++ H FRSW+  ++ I + S  D S A+Y     L CHDD+L  RR+AF+ YLVP  W    GG L+LF    +   P ++ K L+P  N++V F VS  SFHQV EVL+ E     RLSISGWF G  L RPP +  P + R S H  +  E+  D        + P YLDME    +Q  F+E+  + L  FL P+ +A   +A+  G   W   GP N R
Sbjct:   79 LQKELLNLDFHEKYNDLYKFQQSDDLKKRREPHICAL---RKILFEH-FRSWISDISKIDLESTIDMSCAKYEFSDALLCHDDELEGRRIAFILYLVPP-WDASLGGTLDLFSVDEHFQ-PKQIVKSLIPSWNTLVFFEVSPVSFHQVSEVLSEEK---SRLSISGWFHGPSLTRPPTYFEPLIAR-SPHIPQDHEILYD-------WINPTYLDMEYQAQIQEEFEESSEILLKEFLQPEKFAEVCEALERGHVEWSSRGPPNKR 327          
BLAST of mRNA_M-pyrifera_M_contig79758.18714.1 vs. uniprot
Match: A0A0B6ZQG4_9EUPU (P4Hc domain-containing protein n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZQG4_9EUPU)

HSP 1 Score: 155 bits (393), Expect = 3.480e-40
Identity = 100/254 (39.37%), Postives = 138/254 (54.33%), Query Frame = 1
Query:   52 ERRNDLYDFEQTDFPAHAPSKSALGEFRTLIYSHGFRSWVEAVTGIAVSSECDFSAARYGPGHFLSCHDDDLAERRVAFVYYLVPEDWGVEDGGGLELFDHRRNLSIPGEMKKVLMPRRNSMVLFAVSASSFHQVQEVLAREGRKGDRLSISGWFRGAPLPRPPPHPCLFRPSSHYTRKMEVTEDAGVVGMGMVTPAYLDMENLGMMQASFQENQFLSLDNFLLPKWYATFYKAM--GVQPWQHCGPLNLRSLY 807
            ++ NDLY F Q+    ++ SK AL  FR+L      + ++  VTGI ++S+ D   ++Y     L CHDD+L ERR+AF+YYLVPE W + DGG L+LFD    L  P  + K ++P+RNS + F VSA+SFHQV EVL     K  RLSISGWF G PL RPP +      +  Y     + E+   V    + P YL  E    ++  F+E+  + L +FL    Y     A+  G   W   GP N R+ Y
Sbjct:  137 DKNNDLYKFSQSADLNYSQSK-ALSTFRSLC--EDMKIFLSNVTGIPLNSKIDLFCSQYKYTDILLCHDDELEERRIAFIYYLVPEQWSLSDGGTLDLFDSDE-LGQPKNIVKSIVPKRNSFLFFEVSAASFHQVAEVLTD---KMTRLSISGWFHGPPLARPPTYTDTLPLAISYG---SIEEE---VFYAWINPLYLAPEIQTDIKRRFEEDSEIELTDFLQEDKYLELIAALQTGNINWILLGPANKRNYY 377          
BLAST of mRNA_M-pyrifera_M_contig79758.18714.1 vs. uniprot
Match: A0A8C5PRW2_9ANUR (Prolyl 3-hydroxylase OGFOD1 n=2 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5PRW2_9ANUR)

HSP 1 Score: 155 bits (392), Expect = 3.550e-40
Identity = 104/266 (39.10%), Postives = 141/266 (53.01%), Query Frame = 1
Query:   19 LMRELPAGSWEERRNDLYDFEQTDF--PAHAPSKSALGEFRTLIYSHGFRSWVEAVTGIAVSSECDFSAARYGPGHFLSCHDDDLAERRVAFVYYLVPEDWGVEDGGGLELFDHRRNLSIPGEMKKVLMPRRNSMVLFAVSASSFHQVQEVLAREGRKGDRLSISGWFRGAPLPRPPPH--PCLFRPSSHYTRKMEVTEDAGVVGMGMVTPAYLDMENLGMMQASFQENQFLSLDNFLLPKWYATFYKAMGVQP--WQHCGPLNLR 798
            L  EL +  + ++ NDLY F+Q++       P  SAL +    +    FR W+  VTG+ +    D S A+Y     L CHDD+L  RR AF+ YLVPE W  E GG L+L++   N   PG + K L+P+ NS+V F VS  SFHQV EVL  EG+   RLS+SGWF G  L RPPP+  P   R S H     E+  +        V P YL +++   +Q  F+E   + L NFL  + +     A+  QP  W+ CGP N R
Sbjct:   79 LKEELLSLRFNQKSNDLYKFQQSEDLKKRKEPHISALRQ----VLFEDFREWLSDVTGVKLEKTVDMSCAQYNYTDTLLCHDDELEGRRFAFILYLVPE-WLDEYGGSLDLYNTDENTQ-PGAIAKSLIPKWNSLVFFEVSPVSFHQVSEVLC-EGKC--RLSVSGWFYGPYLERPPPYWDPLPLR-SPHIPHDHEILYE-------WVNPVYLSVDSQSQIQEEFEERSEMLLKNFLQEQKFKDVCVALQTQPIDWELCGPPNRR 327          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79758.18714.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CKS2_CAFRO1.740e-4839.19Fe2OG dioxygenase domain-containing protein n=4 Ta... [more]
A0A6J8BZU6_MYTCO1.330e-4638.95uS12 prolyl 3-hydroxylase n=1 Tax=Mytilus coruscus... [more]
E9G930_DAPPU1.790e-4337.08uS12 prolyl 3-hydroxylase n=5 Tax=Daphnia TaxID=66... [more]
A0A8B6FPA5_MYTGA4.780e-4337.83uS12 prolyl 3-hydroxylase n=1 Tax=Mytilus gallopro... [more]
A0A6P4Y8L7_BRABE3.850e-4237.50prolyl 3-hydroxylase OGFOD1-like n=1 Tax=Branchios... [more]
A0A8J9ZN02_BRALA1.790e-4138.02OGFOD1 protein n=1 Tax=Branchiostoma lanceolatum T... [more]
UPI00148AC63E9.540e-4138.34prolyl 3-hydroxylase OGFOD1-like n=1 Tax=Crassostr... [more]
UPI000DBC8F503.380e-4039.10prolyl 3-hydroxylase OGFOD1 isoform X2 n=1 Tax=Bub... [more]
A0A0B6ZQG4_9EUPU3.480e-4039.37P4Hc domain-containing protein n=1 Tax=Arion vulga... [more]
A0A8C5PRW2_9ANUR3.550e-4039.10Prolyl 3-hydroxylase OGFOD1 n=2 Tax=Leptobrachium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79758contigM-pyrifera_M_contig79758:10..891 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score158.7
Seed ortholog evalue3.9e-36
Seed eggNOG ortholog6669.EFX84170
Hectar predicted targeting categoryother localisation
EggNOG free text desc.oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors. It is involved in the biological process described with oxidation-reduction process
EggNOG OGs38GJE@33154,3BA3J@33208,3CX1W@33213,41X51@6656,COG3751@1,KOG3844@2759
COG Functional cat.B
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
Exons2
Model size831
Cds size810
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79758.18714.1prot_M-pyrifera_M_contig79758.18714.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79758 31..891 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816701.0477154-UTR-M-pyrifera_M_contig79758:9..301622816701.0477154-UTR-M-pyrifera_M_contig79758:9..30Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79758 10..30 +
1692278127.867956-UTR-M-pyrifera_M_contig79758:9..301692278127.867956-UTR-M-pyrifera_M_contig79758:9..30Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79758 10..30 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816701.0602796-CDS-M-pyrifera_M_contig79758:30..3791622816701.0602796-CDS-M-pyrifera_M_contig79758:30..379Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79758 31..379 +
1692278127.8854043-CDS-M-pyrifera_M_contig79758:30..3791692278127.8854043-CDS-M-pyrifera_M_contig79758:30..379Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79758 31..379 +
1622816701.072392-CDS-M-pyrifera_M_contig79758:430..8911622816701.072392-CDS-M-pyrifera_M_contig79758:430..891Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79758 431..891 +
1692278127.903525-CDS-M-pyrifera_M_contig79758:430..8911692278127.903525-CDS-M-pyrifera_M_contig79758:430..891Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79758 431..891 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79758.18714.1

>prot_M-pyrifera_M_contig79758.18714.1 ID=prot_M-pyrifera_M_contig79758.18714.1|Name=mRNA_M-pyrifera_M_contig79758.18714.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=270bp
MRELPAGSWEERRNDLYDFEQTDFPAHAPSKSALGEFRTLIYSHGFRSWV
EAVTGIAVSSECDFSAARYGPGHFLSCHDDDLAERRVAFVYYLVPEDWGV
EDGGGLELFDHRRNLSIPGEMKKVLMPRRNSMVLFAVSASSFHQVQEVLA
REGRKGDRLSISGWFRGAPLPRPPPHPCLFRPSSHYTRKMEVTEDAGVVG
MGMVTPAYLDMENLGMMQASFQENQFLSLDNFLLPKWYATFYKAMGVQPW
QHCGPLNLRSLYTTTTTTTT
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mRNA from alignment at M-pyrifera_M_contig79758:10..891+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79758.18714.1 ID=mRNA_M-pyrifera_M_contig79758.18714.1|Name=mRNA_M-pyrifera_M_contig79758.18714.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=882bp|location=Sequence derived from alignment at M-pyrifera_M_contig79758:10..891+ (Macrocystis pyrifera P11B4 male)
GAAGCCTTGGAGCAACAGTTGATGCGTGAATTACCAGCAGGGTCTTGGGA GGAACGTCGCAATGACTTGTATGACTTTGAGCAGACCGACTTTCCGGCTC ATGCTCCATCAAAATCTGCTTTGGGTGAGTTCCGAACACTGATCTACTCG CATGGGTTTCGGTCGTGGGTGGAGGCTGTGACAGGGATTGCTGTGTCTTC GGAATGTGACTTTTCAGCAGCTCGTTACGGTCCTGGACACTTTTTGTCTT GCCATGACGATGATTTGGCAGAGAGACGTGTTGCATTTGTGTATTACTTG GTTCCTGAGGACTGGGGTGTGGAGGATGGGGGTGGATTGGAGTTATTTGA TCATCGTAGGAATTTGAGCAGTGTAGAGACTGGGAAGGATGCGGTGGAGT GGGGTGAGGATTGGGCACCAGTTCCTGGGGAGATGAAGAAAGTGTTGATG CCTCGTCGTAACTCAATGGTGTTATTTGCAGTCTCTGCGTCATCATTCCA TCAAGTACAAGAAGTGCTGGCGAGGGAAGGTAGAAAAGGCGATCGTTTGA GCATTTCTGGATGGTTTCGAGGTGCACCCTTACCACGTCCACCTCCCCAC CCATGCCTCTTTCGTCCATCTTCTCATTACACCCGAAAAATGGAAGTGAC AGAAGATGCAGGAGTTGTTGGGATGGGAATGGTGACACCAGCTTATTTGG ACATGGAAAACTTGGGAATGATGCAAGCCTCGTTTCAAGAAAACCAATTT CTCTCTCTCGACAACTTTCTACTCCCTAAATGGTATGCTACCTTCTACAA AGCTATGGGTGTCCAACCATGGCAGCATTGTGGTCCTCTCAACCTCCGTT CCCTCTACACTACCACCACCACCACCACCACC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79758:10..891+

>mRNA_M-pyrifera_M_contig79758.18714.1 ID=mRNA_M-pyrifera_M_contig79758.18714.1|Name=mRNA_M-pyrifera_M_contig79758.18714.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1620bp|location=Sequence derived from alignment at M-pyrifera_M_contig79758:10..891+ (Macrocystis pyrifera P11B4 male)
ATGCGTGAATTACCAGCAGGGTCTTGGGAGGAACGTCGCAATGACTTGTA
TGACTTTGAGCAGACCGACTTTCCGGCTCATGCTCCATCAAAATCTGCTT
TGGGTGAGTTCCGAACACTGATCTACTCGCATGGGTTTCGGTCGTGGGTG
GAGGCTGTGACAGGGATTGCTGTGTCTTCGGAATGTGACTTTTCAGCAGC
TCGTTACGGTCCTGGACACTTTTTGTCTTGCCATGACGATGATTTGGCAG
AGAGACGTGTTGCATTTGTGTATTACTTGGTTCCTGAGGACTGGGGTGTG
GAGGATGGGGGTGGATTGGAGTTATTTGATCATCGTAGGAATTTGAGCAA
TGCGTGAATTACCAGCAGGGTCTTGGGAGGAACGTCGCAATGACTTGTAT
GACTTTGAGCAGACCGACTTTCCGGCTCATGCTCCATCAAAATCTGCTTT
GGGTGAGTTCCGAACACTGATCTACTCGCATGGGTTTCGGTCGTGGGTGG
AGGCTGTGACAGGGATTGCTGTGTCTTCGGAATGTGACTTTTCAGCAGCT
CGTTACGGTCCTGGACACTTTTTGTCTTGCCATGACGATGATTTGGCAGA
GAGACGTGTTGCATTTGTGTATTACTTGGTTCCTGAGGACTGGGGTGTGG
AGGATGGGGGTGGATTGGAGTTATTTGATCATCGTAGGAATTTGAGCATT
CCTGGGGAGATGAAGAAAGTGTTGATGCCTCGTCGTAACTCAATGGTGTT
ATTTGCAGTCTCTGCGTCATCATTCCATCAAGTACAAGAAGTGCTGGCGA
GGGAAGGTAGAAAAGGCGATCGTTTGAGCATTTCTGGATGGTTTCGAGGT
GCACCCTTACCACGTCCACCTCCCCACCCATGCCTCTTTCGTCCATCTTC
TCATTACACCCGAAAAATGGAAGTGACAGAAGATGCAGGAGTTGTTGGGA
TGGGAATGGTGACACCAGCTTATTTGGACATGGAAAACTTGGGAATGATG
CAAGCCTCGTTTCAAGAAAACCAATTTCTCTCTCTCGACAACTTTCTACT
CCCTAAATGGTATGCTACCTTCTACAAAGCTATGGGTGTCCAACCATGGC
AGCATTGTGGTCCTCTCAACCTCCGTTCCCTCTACACTACCACCACCACC
ACCACCACCTTCCTGGGGAGATGAAGAAAGTGTTGATGCCTCGTCGTAAC
TCAATGGTGTTATTTGCAGTCTCTGCGTCATCATTCCATCAAGTACAAGA
AGTGCTGGCGAGGGAAGGTAGAAAAGGCGATCGTTTGAGCATTTCTGGAT
GGTTTCGAGGTGCACCCTTACCACGTCCACCTCCCCACCCATGCCTCTTT
CGTCCATCTTCTCATTACACCCGAAAAATGGAAGTGACAGAAGATGCAGG
AGTTGTTGGGATGGGAATGGTGACACCAGCTTATTTGGACATGGAAAACT
TGGGAATGATGCAAGCCTCGTTTCAAGAAAACCAATTTCTCTCTCTCGAC
AACTTTCTACTCCCTAAATGGTATGCTACCTTCTACAAAGCTATGGGTGT
CCAACCATGGCAGCATTGTGGTCCTCTCAACCTCCGTTCCCTCTACACTA
CCACCACCACCACCACCACC
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