mRNA_M-pyrifera_M_contig79726.18708.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79726.18708.1 vs. uniprot
Match: A0A6H5KVV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV7_9PHAE) HSP 1 Score: 132 bits (333), Expect = 1.290e-32 Identity = 124/284 (43.66%), Postives = 138/284 (48.59%), Query Frame = 1 Query: 7 LYKLAARNLREYHGVPSMTALKLEKTVALLGLAPRRMVVQXXXXXXLLRGGKGGSPSLECED-------EXXXXXXXXXXXXXXXXXXXXXSYDDNGDNI---DSFGDDTKGDAKADGDGNGKKTRRPVHAALVAGGINLRPRETRPLLRALGVSPHRLVKLGLVTREAVR-ARPGRGWGGPGH--HLRAGGPREF---------GVGGSRGPPCAHGCGPSSGCGPSRPIHGMSAPLGLGPHGSRGHRGPRHRGEHLQGS-----------------FHGPGH 741 LYK ARNLREYHGVPSMTA LEKT+ LL L P R+VVQ LL+G + D E XXXXXXXS D DNI +S G +T K+++ PVHAALVA GI LRPRETRPLLRALGV PHRLVKLGLV RE +R +RPG GGP H H GGP G+G RGPP G P R +HG HG R R G+HL S HGPGH Sbjct: 26 LYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPEKLLKGFSAADAHADTTDSSGSSGSEVEPEQADDNQVSDDXXXXXXXSGDTEHDNIRKHNSLGFETN-----------KRSKHPVHAALVAAGITLRPRETRPLLRALGVGPHRLVKLGLVQREELRRSRPGGRRGGPSHLRHGHPGGPGGRXHXXXRGGRGMGRPRGPP-------PYGPPPHRHVHG---------HGKR-----RAHGDHLHSSGPVHEPPPGPFHESGRPLHGPGH 277
BLAST of mRNA_M-pyrifera_M_contig79726.18708.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 4.210e-16 Identity = 68/173 (39.31%), Postives = 85/173 (49.13%), Query Frame = 1 Query: 7 LYKLAARNLREYHGVPSMTALKLEKTVALLGLAPRRMVVQXXXXXXLLRGGKGGSPSLECEDEXXXXXXXXXXXXXXXXXXXXXSY---DDNGDNIDSFGDDTKGDAKADGDGNGKKT--------RRPVHAALVAGGINLRPRETRPLLRALGVSPHRLVKLGLVTREAVRA 492 LYK+AARNLREY+GVPSMT LKL KT+A L L P+R+V Q LL K + + + DD + D F D + G+ N +K + +H A +AGGI LRPRE RPLL AL V P RL KLGLV + +RA Sbjct: 107 LYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSVEPADTSSPGNDNEEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRA 279
BLAST of mRNA_M-pyrifera_M_contig79726.18708.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 5.530e-15 Identity = 74/200 (37.00%), Postives = 90/200 (45.00%), Query Frame = 1 Query: 7 LYKLAARNLREYHGVPSMTALKLEKTVALLGLAPRRMVVQXXXXXXLLRGGKGGSPSLECEDEXXXXXXXXXXXXXXXXXXXXXSY----------DDNGDNIDSFGDDTKGDAKADGDGNGKKT--------RRPVHAALVAGGINLRPRETRPLLRALGVSPHRLVKLGLVTREAVRA-----------RPGRGWGGP 519 LYK+AARNLREY+GVPSMT KL KT+A L L P+R+V Q LL P ++ E S DD + D F D + + N +K + +H A +AGGI LRPRE RPLL AL V P RL KLGLV + +RA R G G GGP Sbjct: 123 LYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLL-------PRMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSLEDDKKEWNDGFVSVEPADTSSPDNDNEEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKTAHKRHGPGHGGP 315
BLAST of mRNA_M-pyrifera_M_contig79726.18708.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 7.650e-15 Identity = 72/193 (37.31%), Postives = 89/193 (46.11%), Query Frame = 1 Query: 7 LYKLAARNLREYHGVPSMTALKLEKTVALLGLAPRRMVVQXXXXXXLLRGGKG---GSPSLECEDEXXXXXXXXXXXXXXXXXXXXXSYDDNGDNIDSFGDDTKGDAKADGDGNGKKT--------RRPVHAALVAGGINLRPRETRPLLRALGVSPHRLVKLGLVTREAVRA-----------RPGRGWGGP 519 LYK+AARNLREY+GVPSMT KL KT+A L L P+R+V Q LL K + L DD + D F + + +GN ++ + +H A +AGGI LRPRE RPLL AL V P RL KLGLV + +RA R G G GGP Sbjct: 134 LYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANNAKLSKVRLGDGKNNEDLAEWVAAGMEFMSVEDDKKEWNDGFVSVEPAETSSSDNGNEEENDDAAPEVKQNLIHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDLRAMLQAEKKAAHKRHGPGHGGP 326
BLAST of mRNA_M-pyrifera_M_contig79726.18708.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 1.940e-14 Identity = 65/175 (37.14%), Postives = 87/175 (49.71%), Query Frame = 1 Query: 7 LYKLAARNLREYHGVPSMTALKLEKTVALLGLAPRRMVVQXXXXXXLLRGGKGGS---------PSLECEDEXXXXXXXXXXXXXXXXXXXXXSYDDNGDNID----SFGDDTKGDAKADGDGNGKKTRRPVHAALVAGGINLRPRETRPLLRALGVSPHRLVKLGLVTREAVRA 492 LYK+AARNLREY+GVPSMT KL KT+A L L P+R+V Q LL K + P + ++ ++D +++ SF D + D + + +H A +AGGI LRPRE RPLL AL V P+RL KLGLV + +RA Sbjct: 125 LYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDGKKEWNDGFVSVEPAEISF---PANDNEEKNDAAPEAKKNLIHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDLRA 296
BLAST of mRNA_M-pyrifera_M_contig79726.18708.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 3.190e-14 Identity = 70/183 (38.25%), Postives = 85/183 (46.45%), Query Frame = 1 Query: 7 LYKLAARNLREYHGVPSMTALKLEKTVALLGLAPRRMVVQXXXXXXLLRGGKGGSPS--LECEDEXXXXXXXXXXXXXXXXXXXXXSYDDNGDNIDSFGDDTKGDAKADGDGNGKKTRRP-------------------VHAALVAGGINLRPRETRPLLRALGVSPHRLVKLGLVTREAVRA 492 LYK+AARNLREY+GVPSMTA KL KT+A L L PRR+V Q LL K + + + S +D+ ++ K DA A KT P +H A +AGGI LRPRE RPLL AL V P RL KLGLV + +RA Sbjct: 107 LYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKVTLGDGENNEDLAESVAAGMELMSVEDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDAAPEVKKNLIHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYLRA 289
BLAST of mRNA_M-pyrifera_M_contig79726.18708.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 6.470e-14 Identity = 76/168 (45.24%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 7 LYKLAARNLREYHGVPSMTALKLEKTVALLGLAPRRMVVQXXXXXXLLRGGKGGSPSLECEDEXXXXXXXXXXXXXXXXXXXXXSYDDNGDNIDSFGDDTKGDAKADGDGNGKKT---RRPVHAALVAGGINLRPRETRPLLRA---LGVSPHRLVKLGLVTREAVRA 492 LYK AARNL EYHGVPSMTA LEKT+ LL L P R+V Q LL G + XXXXXXXXXX DD+ N G D + D A D +T + P+HA VA G+ LRPRETRPLLR L SP L + T AV A Sbjct: 51 LYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLEGKSAAGDAXXXXXXXXXXXXXXXXEVDPEQADNNQVSDDSNTNS-RDGTDIEHDHVATQDSIDIETGASKHPIHAVFVAAGVQLRPRETRPLLRGVVLLTSSPVALEVVATTTTAAVEA 217
BLAST of mRNA_M-pyrifera_M_contig79726.18708.1 vs. uniprot
Match: A0A6H5L2C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2C8_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 8.900e-13 Identity = 38/52 (73.08%), Postives = 43/52 (82.69%), Query Frame = 1 Query: 349 TRRPVHAALVAGGINLRPRETRPLLRALGVSPHRLVKLGLVTRE-AVRARPG 501 ++ P+HA VA G+ LRPRETRPLLRALGV PHRLVKLGLV RE A R+RPG Sbjct: 100 SKHPIHAVFVAAGVQLRPRETRPLLRALGVGPHRLVKLGLVQREEARRSRPG 151
BLAST of mRNA_M-pyrifera_M_contig79726.18708.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 2.150e-12 Identity = 70/191 (36.65%), Postives = 85/191 (44.50%), Query Frame = 1 Query: 7 LYKLAARNLREYHGVPSMTALKLEKTVALLGLAPRRMVVQXXXXXXLLRGGKGGSPSLECEDEXXXXXXXXXXXXXXXXXXXXXSYDDNGDNIDSFGDDTK----GDAKADGDGNGK------KTRRP-------------------VHAALVAGGINLRPRETRPLLRALGVSPHRLVKLGLVTREAVRA 492 LYK+AARNLREY+GVPSMTA KL KT+A L L P+R+V Q LL K + + + G + S DD K G A+ D + KT P +H A + GGI LRPRE RPLL AL V P RL KLGLV + +RA Sbjct: 125 LYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAA--------GMELMSVEDDKKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDAAPETKKDLIHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRA 307
BLAST of mRNA_M-pyrifera_M_contig79726.18708.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 1.780e-10 Identity = 57/154 (37.01%), Postives = 75/154 (48.70%), Query Frame = 1 Query: 7 LYKLAARNLREYHGVPSMTALKLEKTVALLGLAPRRMVVQXXXXXXLLRGGK---------GGSPSLECEDEXXXXXXXXXXXXXXXXXXXXXSYDDNGDNIDSFGDDTKGDAKADGDGNG---KKTRRPVHAALVAGGINLRPRETRPLLRAL 432 ++K AARNLREYHGVPS+T LE T+ LL L P R+V Q LL+G GS E E+E S+D + ++ D G DT D + G + ++ P+ A VA G+ LRPRETRPLLR + Sbjct: 41 MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLKGNSTAGVDADSTDGSGGFEAEEEQANNQF---------------SHDLSSNSSD--GGDTGNDNIVTQNSIGFEARASKHPIQAVFVAVGVQLRPRETRPLLRGV 177 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79726.18708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79726.18708.1 >prot_M-pyrifera_M_contig79726.18708.1 ID=prot_M-pyrifera_M_contig79726.18708.1|Name=mRNA_M-pyrifera_M_contig79726.18708.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=247bp SALYKLAARNLREYHGVPSMTALKLEKTVALLGLAPRRMVVQGLAPRRLLback to top mRNA from alignment at M-pyrifera_M_contig79726:15..854+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79726.18708.1 ID=mRNA_M-pyrifera_M_contig79726.18708.1|Name=mRNA_M-pyrifera_M_contig79726.18708.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig79726:15..854+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79726:15..854+ >mRNA_M-pyrifera_M_contig79726.18708.1 ID=mRNA_M-pyrifera_M_contig79726.18708.1|Name=mRNA_M-pyrifera_M_contig79726.18708.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1482bp|location=Sequence derived from alignment at M-pyrifera_M_contig79726:15..854+ (Macrocystis pyrifera P11B4 male)back to top |