mRNA_M-pyrifera_M_contig79605.18687.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79605.18687.1
Unique NamemRNA_M-pyrifera_M_contig79605.18687.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig79605.18687.1 vs. uniprot
Match: A0A3M6TX76_POCDA (Farnesylated proteins-converting enzyme 2 n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6TX76_POCDA)

HSP 1 Score: 96.7 bits (239), Expect = 2.090e-21
Identity = 56/143 (39.16%), Postives = 81/143 (56.64%), Query Frame = 1
Query:    1 CTIPLLLSAGFGVQWSLILAPLSFAAAHAHHAIESLRRGERVAVVLVQTIAQLAYTFLFGSFAAWLHLRTGVVIAPMLAHCICNIHGLPDFKWPAKVLAQWFYPVVLS--YLAGIITFFVLLHPLTSNVFFNSPLYKIATSCV 423
            C +PLL+  GFG    + ++PL F  AH HH IE L++GE    V    I Q  YT +FG + A+L LRTG +I P+L H  CN  G P    P   +    YP ++S  ++AG++ F +L  PLT+ V++NS  Y +  + V
Sbjct:  160 CLVPLLVP-GFGNAMPIFISPLFFGVAHIHHVIERLQQGENPKDVWSTAIFQFGYTTVFGGYTAFLFLRTGHLIGPVLCHSFCNFMGFP----PLDQVPSSKYPRIISASFVAGLVVFLILAVPLTNPVWYNSVYYSLQANDV 297          
BLAST of mRNA_M-pyrifera_M_contig79605.18687.1 vs. uniprot
Match: A0A0B6ZMP5_9EUPU (Farnesylated proteins-converting enzyme 2 (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZMP5_9EUPU)

HSP 1 Score: 94.0 bits (232), Expect = 2.300e-21
Identity = 50/137 (36.50%), Postives = 85/137 (62.04%), Query Frame = 1
Query:    1 CTIPLLLSAGFGVQWSLILAPLSFAAAHAHHAIESLRRGER-VAVVLVQTIAQLAYTFLFGSFAAWLHLRTGVVIAPMLAHCICNIHGLPDFKWPAKVLAQWFYPVVLSYLAGIITFFVLLHPLTSNVFFNSPLYKI 408
            C +PLL+ +  G  WS+ L PL F  AH HH IE + +G++ V     +++ QL+YT +FG+++A+L LRTG ++AP++AH  CN  G P F       +     +++ ++ G+IT+ +LL PLTS   +++ +Y +
Sbjct:   49 CMLPLLVPS-LGPGWSVFLCPLFFGVAHFHHMIEKVAQGQQAVGEAFAESLFQLSYTTVFGAYSAFLFLRTGHLMAPVIAHAFCNHMGFPSFGEVMGYPSSTRLKLIVLFVLGLITWLLLLFPLTSPWLYSNDIYGL 184          
BLAST of mRNA_M-pyrifera_M_contig79605.18687.1 vs. uniprot
Match: A0A2B4RGT9_STYPI (Farnesylated proteins-converting enzyme 2 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RGT9_STYPI)

HSP 1 Score: 94.7 bits (234), Expect = 1.240e-20
Identity = 56/143 (39.16%), Postives = 80/143 (55.94%), Query Frame = 1
Query:    1 CTIPLLLSAGFGVQWSLILAPLSFAAAHAHHAIESLRRGERVAVVLVQTIAQLAYTFLFGSFAAWLHLRTGVVIAPMLAHCICNIHGLPDFKWPAKVLAQWFYPVVLS--YLAGIITFFVLLHPLTSNVFFNSPLYKIATSCV 423
            C IPLL+  GFG    + ++PL F  AH HH IE L++GE    V    I Q  YT +FG + A+L LRTG +I P+L H  CN  G P    P   +    YP ++S  ++AG++ F +L  PLT+  ++NS  Y +  + V
Sbjct:  167 CLIPLLVP-GFGNVMPIFISPLFFGVAHIHHVIERLQQGENPKDVWSTAIFQFGYTTVFGGYTAFLFLRTGHLIGPVLCHSFCNFMGFP----PLDQVPSSKYPRIISVSFVAGLVMFLILAVPLTNPAWYNSVYYSLQANDV 304          
BLAST of mRNA_M-pyrifera_M_contig79605.18687.1 vs. uniprot
Match: A0A484L9I1_9ASTE (Uncharacterized protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484L9I1_9ASTE)

HSP 1 Score: 94.0 bits (232), Expect = 6.140e-20
Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 1
Query:    1 CTIPLLLSAGFGVQWSLILAPLSFAAAHAHHAIE-SLRRGERVAVVLVQTIAQLAYTFLFGSFAAWLHLRTGVVIAPMLAHCICNIHGLPDFKWPAKVLAQWFYPVVLSYLAGIITFFVLLHPLTSNVFFNS 393
            C IPLLL  GF V   + L P+ F+ AH +H +E + RRG  V   ++    QL YT +FGS+A++L++RTG ++AP++AH  CN  GLP    P   L      + ++++AG+++F+ LL PLTS   +N+
Sbjct:  248 CMIPLLLCGGFNVYTVVFLCPIFFSLAHLNHLLEYAQRRGSLVKAFMIAGF-QLGYTVIFGSYASFLYVRTGHLLAPLVAHIFCNYMGLPAIISPRPGL------ITVAFIAGLLSFYWLLFPLTSPQLYNN 372          
BLAST of mRNA_M-pyrifera_M_contig79605.18687.1 vs. uniprot
Match: A0A3S0Z850_ELYCH (Farnesylated proteins-converting enzyme 2 n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0Z850_ELYCH)

HSP 1 Score: 92.4 bits (228), Expect = 7.140e-20
Identity = 51/135 (37.78%), Postives = 84/135 (62.22%), Query Frame = 1
Query:    1 CTIPLLLSAGFGVQWSLILAPLSFAAAHAHHAIESLRRGER-VAVVLVQTIAQLAYTFLFGSFAAWLHLRTGVVIAPMLAHCICNIHGLPDFKWPAKVLAQWFYPVVLSYLAGIITFFVLLHPLTSNVFFNSPLY 402
            C +PLLL +  GV WS++L PL F  AH HH IE + +G++ VA    Q++ QL YT +FG+++A+L LRTG ++AP++AH  CN  G P F           + ++  ++ G+I++  +L+P T+   F++ +Y
Sbjct:  154 CMLPLLLPS-LGVTWSIVLCPLFFGVAHFHHMIEKVVQGQQEVAESFKQSLFQLGYTTVFGAYSAFLFLRTGHLMAPVIAHAFCNHMGFPSFGEVMGYQQTTRHKLMGLFVLGLISWICVLYPFTTPWLFSNNIY 287          
BLAST of mRNA_M-pyrifera_M_contig79605.18687.1 vs. uniprot
Match: A0A0A9NPN4_ARUDO (Uncharacterized protein n=3 Tax=Arundo donax TaxID=35708 RepID=A0A0A9NPN4_ARUDO)

HSP 1 Score: 89.0 bits (219), Expect = 1.130e-19
Identity = 53/134 (39.55%), Postives = 81/134 (60.45%), Query Frame = 1
Query:    1 CTIPLLLSAGFGVQWSLILAPLSFAAAHAHHAIESLRRGERVAVVLVQTIAQLAYTFLFGSFAAWLHLRTGVVIAPMLAHCICNIHGLPDFKWP-AKVLAQWFYPVVLSYLAGIITFFVLLHPLTSNVFFNSPL 399
            C IPLLL  GF +   + L+P+ F+ AH +H  E  ++G      L+    QL YT +FG +AA+L +RTG +++P++AH +CN+ GLP F  P  + LA       +++LAG ++FF LL P TS   +N+ L
Sbjct:   20 CMIPLLLCGGFKMYNIIFLSPVFFSLAHLNHLFELHQQGRSFMRSLLIVGVQLGYTVIFGWYAAFLFIRTGNLLSPIVAHIVCNMMGLPVFSSPPTRGLAS------VAFLAGSVSFFWLLFPATSPKLYNTRL 147          
BLAST of mRNA_M-pyrifera_M_contig79605.18687.1 vs. uniprot
Match: UPI00035929CE (CAAX prenyl protease 2 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035929CE)

HSP 1 Score: 91.3 bits (225), Expect = 1.980e-19
Identity = 48/137 (35.04%), Postives = 85/137 (62.04%), Query Frame = 1
Query:    1 CTIPLLLSAGFGVQWSLILAPLSFAAAHAHHAIESLRRGER-VAVVLVQTIAQLAYTFLFGSFAAWLHLRTGVVIAPMLAHCICNIHGLPDFKWPAKVLAQWFYPVVLSYLAGIITFFVLLHPLTSNVFFNSPLYKI 408
            C +P+LL    G  WS++L PL F  AH HH IE +   ++ V+    Q++ QL YT +FG+++A+L LRTG ++AP++AH  CN  G P F       +   + ++  ++ G++++ +LL+PLTS + +++ +Y +
Sbjct:  155 CMLPVLLPR-LGEGWSILLCPLFFGVAHFHHMIEKVVHSQQDVSEAFKQSLFQLGYTTVFGAYSAFLFLRTGHLMAPVIAHAFCNHMGFPSFGEVMGYPSPTRHRLIALFVLGLVSWLLLLYPLTSPLLYSNDVYVL 290          
BLAST of mRNA_M-pyrifera_M_contig79605.18687.1 vs. uniprot
Match: A0A2T7NWJ2_POMCA (Farnesylated proteins-converting enzyme 2 n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NWJ2_POMCA)

HSP 1 Score: 89.4 bits (220), Expect = 3.720e-19
Identity = 52/140 (37.14%), Postives = 84/140 (60.00%), Query Frame = 1
Query:    1 CTIPLLLSAGFGVQWSLILAPLSFAAAHAHHAIES-LRRGERVAVVLVQTIAQLAYTFLFGSFAAWLHLRTGVVIAPMLAHCICNIHGLPDFK----WPAKVLAQWFYPVVLSYLAGIITFFVLLHPLTSNVFFNSPLYK 405
            C +PLL+ A FG+ WS+ L PL F  AH HH IE  + +   V     Q++ QL YT +FG+++A+L LRTG +IAP++AH  CN  G P F     +P    ++    ++  +  G+I + +LL P+TS+  +++ +Y+
Sbjct:   94 CMLPLLVPA-FGIGWSVFLCPLFFGVAHFHHMIEKVIHKQAEVIDAFRQSMFQLFYTTVFGAYSAFLFLRTGHLIAPVMAHAFCNHMGFPAFNEVLGYPQPTRSK----LIAIFTLGLILWSILLFPMTSSWLYSNYVYQ 228          
BLAST of mRNA_M-pyrifera_M_contig79605.18687.1 vs. uniprot
Match: UPI00077A01E2 (CAAX prenyl protease 2-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077A01E2)

HSP 1 Score: 90.5 bits (223), Expect = 4.030e-19
Identity = 54/141 (38.30%), Postives = 76/141 (53.90%), Query Frame = 1
Query:    1 CTIPLLLSAGFGVQWSLILAPLSFAAAHAHHAIESLRRGERVAVVLVQTIAQLAYTFLFGSFAAWLHLRTGVVIAPMLAHCICNIHG------LPDFKWPAKVLAQWFYPVVLSYLAGIITFFVLLHPLTSNVFFNSPLYK 405
            C IP+L+  GFG    + + PL F  AH HH IE L+ GE    V      Q  YT +FG ++A+L LRTG +I P++ H  CN  G      +P  K+P  + A        S+LAG++ F VL  PLT+  ++NS  Y+
Sbjct:  157 CLIPMLVP-GFGNVLPIFICPLFFGVAHIHHVIERLQLGENSQDVWFNAFFQFGYTTVFGGYSAFLFLRTGHLIGPVICHTFCNFMGFPVIDQIPSSKYPRFISA--------SFLAGLVLFLVLALPLTNPTWYNSIYYQ 288          
BLAST of mRNA_M-pyrifera_M_contig79605.18687.1 vs. uniprot
Match: M2P9X9_CERS8 (Uncharacterized protein n=1 Tax=Ceriporiopsis subvermispora (strain B) TaxID=914234 RepID=M2P9X9_CERS8)

HSP 1 Score: 90.5 bits (223), Expect = 6.490e-19
Identity = 50/132 (37.88%), Postives = 75/132 (56.82%), Query Frame = 1
Query:    1 CTIPLLLSAGFGVQWSLILAPLSFAAAHAHHAIESLRRGERVA----VVLVQTIAQLAYTFLFGSFAAWLHLRTGVVIAPMLAHCICNIHGLPDFKWPAKVLAQWFYPVVLSYLAGIITFFVLLHPLTSNVF 384
            CT+ +   AG   +  + L PL+F AAH HHA E+  +  R A    +  +QTIAQL YT LFG   A+L +RTG ++  +++H  CNI GLP F    + L  W + ++L+YL GI  +   +   T++ F
Sbjct:  185 CTLAVYHLAGLSRKKMIFLTPLTFGAAHLHHAWETYNQLGRTAKAAKIATIQTIAQLGYTSLFGFHCAFLFMRTGSLLPALISHVFCNIMGLPAFGMHLRQLPGWRFGIILTYLLGIAAYIYTMDKWTNSYF 316          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79605.18687.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3M6TX76_POCDA2.090e-2139.16Farnesylated proteins-converting enzyme 2 n=2 Tax=... [more]
A0A0B6ZMP5_9EUPU2.300e-2136.50Farnesylated proteins-converting enzyme 2 (Fragmen... [more]
A0A2B4RGT9_STYPI1.240e-2039.16Farnesylated proteins-converting enzyme 2 n=1 Tax=... [more]
A0A484L9I1_9ASTE6.140e-2040.15Uncharacterized protein n=3 Tax=Cuscuta sect. Clei... [more]
A0A3S0Z850_ELYCH7.140e-2037.78Farnesylated proteins-converting enzyme 2 n=1 Tax=... [more]
A0A0A9NPN4_ARUDO1.130e-1939.55Uncharacterized protein n=3 Tax=Arundo donax TaxID... [more]
UPI00035929CE1.980e-1935.04CAAX prenyl protease 2 n=1 Tax=Aplysia californica... [more]
A0A2T7NWJ2_POMCA3.720e-1937.14Farnesylated proteins-converting enzyme 2 n=1 Tax=... [more]
UPI00077A01E24.030e-1938.30CAAX prenyl protease 2-like n=2 Tax=Acropora TaxID... [more]
M2P9X9_CERS86.490e-1937.88Uncharacterized protein n=1 Tax=Ceriporiopsis subv... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79605contigM-pyrifera_M_contig79605:2..616 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score89.7
Seed ortholog evalue1.2e-15
Seed eggNOG ortholog6500.XP_005089152.1
Preferred nameRCE1
KEGG rclassRC00141
KEGG koko:K08658
KEGG ReactionR09845
KEGG Pathwayko00900,ko01130,map00900,map01130
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005886,GO:0005887,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008237,GO:0009987,GO:0010467,GO:0012505,GO:0016020,GO:0016021,GO:0016485,GO:0016579,GO:0016787,GO:0019538,GO:0030176,GO:0031224,GO:0031226,GO:0031227,GO:0031984,GO:0036211,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0051604,GO:0070011,GO:0070646,GO:0070647,GO:0071586,GO:0071704,GO:0071944,GO:0080120,GO:0098827,GO:0140096,GO:1901564
EggNOG free text desc.caax prenyl protease
EggNOG OGs39S0C@33154,3BH8R@33208,3D18C@33213,KOG4130@1,KOG4130@2759
COG Functional cat.O
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Exons2
Model size429
Cds size429
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816699.8687768-CDS-M-pyrifera_M_contig79605:1..2801622816699.8687768-CDS-M-pyrifera_M_contig79605:1..280Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79605 2..280 +
1692278127.2366855-CDS-M-pyrifera_M_contig79605:1..2801692278127.2366855-CDS-M-pyrifera_M_contig79605:1..280Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79605 2..280 +
1622816699.8801217-CDS-M-pyrifera_M_contig79605:466..6161622816699.8801217-CDS-M-pyrifera_M_contig79605:466..616Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79605 467..616 +
1692278127.2523012-CDS-M-pyrifera_M_contig79605:466..6161692278127.2523012-CDS-M-pyrifera_M_contig79605:466..616Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79605 467..616 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79605.18687.1prot_M-pyrifera_M_contig79605.18687.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79605 2..616 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79605.18687.1

>prot_M-pyrifera_M_contig79605.18687.1 ID=prot_M-pyrifera_M_contig79605.18687.1|Name=mRNA_M-pyrifera_M_contig79605.18687.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp
CTIPLLLSAGFGVQWSLILAPLSFAAAHAHHAIESLRRGERVAVVLVQTI
AQLAYTFLFGSFAAWLHLRTGVVIAPMLAHCICNIHGLPDFKWPAKVLAQ
WFYPVVLSYLAGIITFFVLLHPLTSNVFFNSPLYKIATSCVA*
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mRNA from alignment at M-pyrifera_M_contig79605:2..616+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79605.18687.1 ID=mRNA_M-pyrifera_M_contig79605.18687.1|Name=mRNA_M-pyrifera_M_contig79605.18687.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=615bp|location=Sequence derived from alignment at M-pyrifera_M_contig79605:2..616+ (Macrocystis pyrifera P11B4 male)
TGTACTATTCCTCTCCTCCTCTCTGCAGGCTTTGGTGTGCAATGGTCGCT CATTCTTGCACCTCTCTCTTTTGCAGCTGCTCACGCACACCATGCAATTG AATCATTACGAAGAGGTGAAAGAGTGGCTGTTGTTCTTGTACAAACCATT GCTCAGCTCGCATACACATTCCTCTTTGGATCCTTTGCAGCTTGGCTCCA TCTCCGAACTGGAGTTGTCATCGCTCCAATGCTTGCCCATTGTATCTGCA ATATCCATGGACTGCCAGACTTTAAATGGGTCTCTCTTTGGTCTGAGGCA CCATCTCCTACAGCATTCCTACGAAAATCTTCCACAGCTCTCTCCAATCG AGCATCAGGCCGCGTTGGAGTGCCATACTTGCGAACAGGTCCACCACTTG CTGCTCCTGGTGGTCTCCCAGCTCCAGGTGGAATGGCAGCTGCAGGTGTT GAAGGGTTTCCGAAGCCAGCAAAAGTCCTCGCACAATGGTTCTATCCTGT CGTCCTTTCCTATCTAGCAGGGATCATCACCTTCTTCGTTCTTCTCCACC CGCTTACCTCAAACGTCTTCTTCAACTCGCCACTGTACAAAATCGCCACT TCGTGTGTTGCCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79605:2..616+

>mRNA_M-pyrifera_M_contig79605.18687.1 ID=mRNA_M-pyrifera_M_contig79605.18687.1|Name=mRNA_M-pyrifera_M_contig79605.18687.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig79605:2..616+ (Macrocystis pyrifera P11B4 male)
TGTACTATTCCTCTCCTCCTCTCTGCAGGCTTTGGTGTGCAATGGTCGCT
CATTCTTGCACCTCTCTCTTTTGCAGCTGCTCACGCACACCATGCAATTG
AATCATTACGAAGAGGTGAAAGAGTGGCTGTTGTTCTTGTACAAACCATT
GCTCAGCTCGCATACACATTCCTCTTTGGATCCTTTGCAGCTTGGCTCCA
TCTCCGAACTGGAGTTGTCATCGCTCCAATGCTTGCCCATTGTATCTGCA
ATATCCATGGACTGCCAGACTTTAAATGGTGTACTATTCCTCTCCTCCTC
TCTGCAGGCTTTGGTGTGCAATGGTCGCTCATTCTTGCACCTCTCTCTTT
TGCAGCTGCTCACGCACACCATGCAATTGAATCATTACGAAGAGGTGAAA
GAGTGGCTGTTGTTCTTGTACAAACCATTGCTCAGCTCGCATACACATTC
CTCTTTGGATCCTTTGCAGCTTGGCTCCATCTCCGAACTGGAGTTGTCAT
CGCTCCAATGCTTGCCCATTGTATCTGCAATATCCATGGACTGCCAGACT
TTAAATGGCCAGCAAAAGTCCTCGCACAATGGTTCTATCCTGTCGTCCTT
TCCTATCTAGCAGGGATCATCACCTTCTTCGTTCTTCTCCACCCGCTTAC
CTCAAACGTCTTCTTCAACTCGCCACTGTACAAAATCGCCACTTCGTGTG
TTGCCTGACCAGCAAAAGTCCTCGCACAATGGTTCTATCCTGTCGTCCTT
TCCTATCTAGCAGGGATCATCACCTTCTTCGTTCTTCTCCACCCGCTTAC
CTCAAACGTCTTCTTCAACTCGCCACTGTACAAAATCGCCACTTCGTGTG
TTGCCTGA
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