mRNA_M-pyrifera_M_contig7960.18685.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7960.18685.1
Unique NamemRNA_M-pyrifera_M_contig7960.18685.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig7960.18685.1 vs. uniprot
Match: A0A6H5KU92_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU92_9PHAE)

HSP 1 Score: 470 bits (1209), Expect = 6.390e-151
Identity = 294/639 (46.01%), Postives = 364/639 (56.96%), Query Frame = 1
Query:    4 GGRVWTSMKTNLSKHTCCFSDFRWPEDAPTFPSCAQVRQYLEDYAVRFNLVRYVRFGHEVTAVGP-----SKSGGWEVTFTSNSTAGDASAEKAQKTTD--------------VFDKCIIASGIFVTPYFPPPEKVRGITAAVENGWATHSGAYRDPEQFSGKSVLVVGCAFSGAEIASGLTETVEKCVVATGGASVFLPRVFSMPVPNPDKQPATLADAPSVSVGDVN---DGGVSSASVGEEGSARCAT-------TETRTGGCGHSCGVASGGHTSPE--STAYGMPLDLVLYSLKAAAGESAKNLSAAEKLRGLRTYCLHLAGQDPGDVHEALRLE-------NGPNVSTSVAISEAFL-----------------------------------SKVRDGFIEVKPRLIALDVQESKAHFSDGTSEHVDHVICCTGLRPKIGFLPANILEQYEFDESDSVQPILLHALTWNPCIPNLAFVGVYRAPYFGVVELQARWVARMWSGAVPPPTAEICAAGLQERRDVRNAQPRSQFASGYVEVMEALAEVAGLVPSQDWSASTARDGRYGPDNDI--NTDDVDANHAPKMQRSVELSLFSEALAEICPDGKAEE--AMLVLKEWLWSGPLLPCHYRIR 1689
            GGRVW+S+KTNLSKHTCCFSDFRWP D P FPS A++RQY+EDYA  F+L ++VRFG  VTAV P     + S  W +TFTS +T G  +A   Q+TTD               FDKCIIASG+F   +FPP   V GI+ AVE GWATH  AYRDP  F+GKSVLVVGCAFSGAEIASG      +C+ ATG  S+FLPR   +      + P + A  P    G+V      G S+A  G   SA  A        T T+ GG  H         T P   + +  +PLDL LYS +A AG   K   A EKL   R + + LAG+DPGD HEALRL        +  + S  V +S+ FL                                   SKVRDG +E++ RL+ALD  E    FSDG  E VDH+I CTGLRP +GFLP ++L Q E D+ D +QP++LH   WNP +P+L FVGVYR PYFGV+ELQARW+ RMWSGAVP PT    AA LQE R VR A PR QF + YV++ME LA VAGL+PS     S++      P + +  N D  +     + QR +     S A      +G +EE  A+  L E +WSGPLLPCHYR++
Sbjct:  380 GGRVWSSLKTNLSKHTCCFSDFRWPVDTPDFPSSARLRQYIEDYAAHFDLAKHVRFGVLVTAVVPRPAADAGSPRWNITFTS-ATHGRCAARGDQRTTDPSVPTQEDVVQRTETFDKCIIASGVFSELHFPP---VEGISEAVEQGWATHGAAYRDPGLFAGKSVLVVGCAFSGAEIASG------RCLAATGRPSIFLPRFVDIYAA---RGPPSSASVPQDGAGNVAAKPGNGTSTAGDGALQSAHSARRRSGDNLTSTKRGGGKHPDNPRCTQDTPPPLATASPRVPLDLALYSRRARAGS--KLAPALEKLEKSRNFLVKLAGRDPGDAHEALRLSQRSENRHDSDSGSVRVVVSDDFLDRVRRVEANWGEVSHACRPPRRVLLRVHFEMTGPFSKVRDGCVEIRQRLVALDTTERTVRFSDGDVEKVDHMIFCTGLRPSLGFLPGDVLRQLEHDKGDLLQPLILHLQAWNPSVPDLGFVGVYRGPYFGVMELQARWITRMWSGAVPMPTEAESAAALQESRSVRTATPRPQFPTDYVDMMEGLAGVAGLLPSNRKDLSSSPSSAVSPVDCLGENADSAELVAMIQSQRPL-----SGAKGTTGREGASEERDAIGALNERMWSGPLLPCHYRLQ 998          
BLAST of mRNA_M-pyrifera_M_contig7960.18685.1 vs. uniprot
Match: D7FZL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL8_ECTSI)

HSP 1 Score: 450 bits (1157), Expect = 2.060e-148
Identity = 284/592 (47.97%), Postives = 342/592 (57.77%), Query Frame = 1
Query:    1 SGGRVWTSMKTNLSKHTCCFSDFRWPEDAPTFPSC-AQVRQYLEDYAVRFNLVRYVRFGHEVTAVGP----SKSGGWEVTFTSNSTAGDASAEKAQKTTD--------------VFDKCIIASGIFVTPYFPPPEKVRGITAAVENGWATHSGAYRDPEQFSGKSVLVVGCAFSGAEIASGLTETVEKCVVATGGASVFLPRVFSMPVPNPDKQPATL-ADAPSVSVGDVNDGGVSSASVGEEGSARCATTETRTGGCGHSCGVASGGHTSPESTAYGMPLDLVLYSLKAAAGESAKNLSAAEKLRGLRTYCLHLAGQDPGDVHEALRLENGP-------NVSTSVAISEAFLSKVRDGFIEVKPRLIALDVQESKAHFSDGTSEHVDHVICCTGLRPKIGFLPANILEQYEFDESDSVQPILLHALTWNPCIPNLAFVGVYRAPYFGVVELQARWVARMWSGAVPPPTAEICAAGLQERRDVRNAQPRSQFASGYVEVMEALAEVAGLVPSQDWSASTARDGRYGPDNDINTDDVDANHAPKMQRSVELSLFSEALAEICPDGKAEE--AMLVLKEWLWSGPLLPCHYRIR 1689
            SGGRVW+S+KTNLSKHTCCFSDFRWP D P FPS  A++RQY+EDYA  F+L ++VRFG  VTA  P      S  W +TFTS  T    +A   Q+TTD               FDKCIIASGIF  P+FPP   V GI+ AVE GWATH  AYRDP  F G SVLVVGCAFSGAEIAS           A  GAS    R  S    + DK+ +    D P                       RC T +T               H +  S    +PLDL LYS +A AG   K   A+EKL   R + + LAG+DPGD HEALRL  G        +VS  V +S+ FL +VRDG IE++ RL+ALD  E    FSDG  E VDHVI CTGLRP + FLP ++L Q E D+ D +QP++LH   WNP +P+L FVGVYR PYFGV+ELQARW+ARMWSGAVP PT    AA LQE R VR   PR QF + YV++ME LA VAGL+PS+    S++      P N +  +  D+     M RS      S A      +G +EE  A+ VL E +WSGPLLPCHYR++
Sbjct:   44 SGGRVWSSLKTNLSKHTCCFSDFRWPVDTPDFPSSEARLRQYIEDYAAHFDLAKHVRFGVSVTAAVPCLAADGSPRWNITFTST-THRRCAARGDQRTTDPSVTAQEDVVQRTETFDKCIIASGIFSEPHFPP---VEGISEAVEQGWATHGAAYRDPGFFGGDSVLVVGCAFSGAEIAS-----------AHVGASA---RRRSGDDSSSDKRGSEKHPDNP-----------------------RC-TQDTPP-------------HLATASPR--VPLDLALYSRRARAGS--KLAPASEKLESSRKFLVELAGRDPGDAHEALRLSQGSENSHGSESVSVRVVVSDDFLDRVRDGCIEIRQRLVALDTTERTVRFSDGKVEKVDHVILCTGLRPSLEFLPGDVLGQLEHDKGDLLQPLILHLQAWNPSVPDLGFVGVYRGPYFGVMELQARWIARMWSGAVPMPTETESAAALQESRSVRTVIPRPQFPTDYVDMMEGLAGVAGLLPSKRKDLSSSPSSAVSPVNCLG-EIADSEEFVAMMRSQRP--LSGAKGTAGREGGSEEGDAIGVLNERMWSGPLLPCHYRLQ 573          
BLAST of mRNA_M-pyrifera_M_contig7960.18685.1 vs. uniprot
Match: A0A813EY66_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EY66_POLGL)

HSP 1 Score: 238 bits (606), Expect = 4.070e-68
Identity = 165/489 (33.74%), Postives = 239/489 (48.88%), Query Frame = 1
Query:    7 GRVWTSMKTNLSKHTCCFSDFRWPEDAPTFPSCAQVRQYLEDYAVRFNLVRYVRFGHEVTAVGPSK--SGGWEVTFTSNSTAGDASAEKAQKT-TDVFDKCIIASGIFVTPYFPPPEKVRGITAAVENGWATHSGAYRDPEQFSGKSVLVVGCAFSGAEIASGLTETVEKCVVATGGASVFLPRVFSMPVPNPDKQPATLADAPSVSVGDVNDGGVSSASVGEEGSARCATTETRTGGCGHSCGVASGGHTSPESTAYGMPLDLVLYSLKAAAGESAKNLSAAEKLRGLRTYCLHLAGQDPGDVHEALRLENGPNVSTS-VAISEAFLSKVRDGFIEVKPRLIALDVQESKAHFSDGTSEHVDHVICCTGLRPKIGFLPANILEQYEFDESDSVQPILLHALTWNPCIPNLAFVGVYRAPYFGVVELQARWVARMWSGAVPPPTAEICAAGLQERRDVRNAQPRSQFASG-YVEVMEALAEVAGLVPSQ 1458
            G+VW S++TNLSK TC FSDF WPE AP FP   +V+ YLE YA + +L+RY+RF   V +V P +  +GGW VT+           E A +T T+ FD  ++A+GIF  P     + V G+ A    G   H+ +YR+P QF+G+ VLVVG AFSG ++A+ L        VA+     ++PR  S                                                                       G P DLV YS   A  E  ++ +  E       + L +AG    D+ E L+  N        VAIS+AFL   R   ++V+P  + +    + A F+ G+ E  D VI  TG R  + F  ++ L+  EFD +D +QP +LH+   +P +P LAFVG+YR PYF  +ELQAR+   ++SG +  PT E+ +AGL E R +R  +PR QF  G YV + ++LA++ G+ P +
Sbjct:   51 GKVWKSLRTNLSKFTCSFSDFPWPEQAPDFPGSGEVQAYLEKYARQHDLLRYMRFQARVISVEPVEGGAGGWNVTW----------QEGASETKTERFDFVVVATGIFSEPCL---DAVPGLGAFT--GQVIHAASYREPSQFAGQRVLVVGAAFSGTDVAADLVGAAATVTVASRRPLWYIPRYIS-----------------------------------------------------------------------GRPADLVFYSR--AKWEKGRHSTEEEANLLRHKFFLSIAG----DLPEPLQTPNPDRGDLPFVAISDAFLDAARKKLVKVRPSEV-VGFDGAAAIFACGSREEFDAVIVATGYRLSLPFFSSSTLQTMEFDSTDLLQPAILHSCILHPGLPGLAFVGIYRGPYFATMELQARYALGLFSGRLQQPTPEVFSAGLAEERQIRAKRPRPQFPHGDYVGMTDSLAKLVGVHPGE 446          
BLAST of mRNA_M-pyrifera_M_contig7960.18685.1 vs. uniprot
Match: A0A7S4PXJ1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PXJ1_9DINO)

HSP 1 Score: 232 bits (591), Expect = 5.530e-66
Identity = 168/489 (34.36%), Postives = 233/489 (47.65%), Query Frame = 1
Query:    7 GRVWTSMKTNLSKHTCCFSDFRWPEDAPTFPSCAQVRQYLEDYAVRFNLVRYVRFGHEVTAVGPSKSG-GWEVTFTSNSTAGDASAEKAQKTTDVFDKCIIASGIFVTPYFPPPEKVRGITAAVENGWATHSGAYRDPEQFSGKSVLVVGCAFSGAEIASGLTETVEKCVVATGGASVFLPRVFSMPVPNPDKQPATLADAPSVSVGDVNDGGVSSASVGEEGSARCATTETRTGGCGHSCGVASGGHTSPESTAYGMPLDLVLYSLKAAAGESAKNLSAAEKLRGLRT--YCLHLAGQDPGDVHEALRLENGPNVSTSVAISEAFLSKVRDGFIEVKPRLIALD-VQESKAHFSDGTSEHVDHVICCTGLRPKIGFLPANILEQYEFDESDSVQPILLHALTWNPCIPNLAFVGVYRAPYFGVVELQARWVARMWSGAVPPPTAEICAAGLQERRDVRNAQPRSQFASG-YVEVMEALAEVAGLVPSQ 1458
            G+VW +++TNLSK+TC FSD  WP  AP FP+ ++V+ YLE YA R  L+R  RF  EVTA+     G GW VT+          +E+    ++ F   ++ASGIF  P+ P   +++G  A    G  TH+  YR+P  F+G+ VLVVG AFSGA+IA+ L        +A      +LPR  +                                                                         P DLV YS  A    SA+   A+E+ R L+   +   L GQ P  +  A   E G      V I+++FL  +R G   V+ R+  ++  + S   FSDGTSE  D VI  TG R ++ FLP    +  E    D +QP +LH   W   +  LAFVG+YR PYF  +ELQARWV  ++SG +P P  E  AAGL+  R +R  +PR QF  G YV ++EALA+  G+ P +
Sbjct:   48 GKVWKALRTNLSKYTCAFSDGPWPPSAPDFPAGSEVQGYLEGYAARHGLLRCARFRSEVTALQRLPDGAGWHVTW----------SEQGGSCSEAFGGVVVASGIFARPHCP---ELQG--AEEFRGRVTHACEYREPTPFAGRRVLVVGAAFSGADIAADLAGAAASVTIACRRPLWYLPRYINS-----------------------------------------------------------------------RPADLVFYSRAA----SARTRGASEEDRNLQRQRFFAGLVGQLPEPL-AAPDPERGE--LPFVTITDSFLDSLRAG--TVRARVAGVEHFRGSSVVFSDGTSEDFDDVILATGYRLELPFLPPEARDALELRPEDGLQPAILHEAVWPRGLAGLAFVGLYRGPYFAAMELQARWVCGVFSGRLPAPAPEELAAGLEVERQIREQRPRPQFPHGDYVGMVEALAQRVGVHPGE 441          
BLAST of mRNA_M-pyrifera_M_contig7960.18685.1 vs. uniprot
Match: A0A2X3KK38_9ACTN (Uncharacterized protein n=1 Tax=Frankia sp. Ea1.12 TaxID=573499 RepID=A0A2X3KK38_9ACTN)

HSP 1 Score: 217 bits (552), Expect = 3.050e-60
Identity = 171/560 (30.54%), Postives = 234/560 (41.79%), Query Frame = 1
Query:    7 GRVWTSMKTNLSKHTCCFSDFRWPEDAPTFPSCAQVRQYLEDYAVRFNLVRYVRFGHEVTAVGPSKSGGWEVTFTSNSTAGDASAEKAQKTTDVFDKCIIASGIFVTPYFPPPEKVRGITAAVENGWATHSGAYRDPEQFSGKSVLVVGCAFSGAEIASGLTETVEKCVVATGGASVFLPRVFSMPVPNPDKQPATLADAPSVSVGDVNDGGVSSASVGEEGSARCATTETRTGGCGHSCGVASGGHTSPESTAYGMPLDLVLYSLKAAAGESAKNLSAAEKLRGLRTYCLHLAGQDPGDVHEALRLENGPNVSTSVAISEAFLSKVRDGFIEVKPRLIALDVQESKAHFSDGTSEHVDHVICCTGLRPKIGFLPANILEQYEFDESDSVQPILLHALTWNPCIPNLAFVGVYRAPYFGVVELQARWVARMWSGAVPPPTAEICAAGLQERRDVRNAQPRSQFASGYVEVMEALAEVAGLVPSQDWSASTARDGRYGPDNDINTDDVDANHAPKMQRSVELSLFSEALAEICPDGKAEEAMLVLKEWLWSGPLLPCHYRI 1686
            G VW  + TN+S+ TC  SD+ WP   P FP  A V +YL+ YA  F+  R +RFG  VT V    SG W V F   S  G A AE       VFD  ++A+G F  P FP   +V G      +G + HSGAYR P +F G+ V+VVG AFSGAEIA+ L          T      +PR   +P+    + P  L             G   SA +G  G+                         +P                             AE+ R  R   L   G +PG++ EALRL+        V +S+   ++V +G + V    +   ++ S     DG     D VI CTG RP + FLP  +    E+D +D  QP+LL    +   IP L+FVG+YR PYFGVVELQARWV  + + AVP P     A G+   R+ R A+PR QF    +E  + +  + G++P                                                  P+   +E     K W W  P++P HYR+
Sbjct:   45 GSVWPELTTNISRFTCSLSDYPWPAGTPEFPRSAAVAEYLKSYARDFDADRAIRFGCRVTGV-ERVSGRWRVAF---SEGGCARAE-------VFDALVVATGFFGRPVFP---RVSGGF----DGLSIHSGAYRGPAEFRGRRVVVVGMAFSGAEIAAELARDGAAVTAVTPRPFWLVPR--RIPLGGGRRVPLDLY------------GNTRSARLGPPGA------------------------VAPPP---------------------------AERYRR-RNQMLSAIGMNPGEIDEALRLDPDSTDPPHVVVSDTVGTEVVEGRLRVVAGRVRR-LERSAVVLDDGRRVDADAVIWCTGYRPDLTFLPRTVSRAVEYDPTDIFQPVLLADAVFPQEIPGLSFVGMYRGPYFGVVELQARWVCAVMASAVPSPAPLERARGVGTARETRLARPRPQFPHNDLEQADRIGRILGVLPE-------------------------------------------------PESARDE-----KNWFWDAPVIPAHYRM 465          
BLAST of mRNA_M-pyrifera_M_contig7960.18685.1 vs. uniprot
Match: A0A212JHN2_9PROT (Uncharacterized protein n=1 Tax=uncultured Alphaproteobacteria bacterium TaxID=91750 RepID=A0A212JHN2_9PROT)

HSP 1 Score: 208 bits (530), Expect = 3.550e-57
Identity = 162/525 (30.86%), Postives = 226/525 (43.05%), Query Frame = 1
Query:    4 GGRVWTSM-KTNLSKHTCCFSDFRWPEDAPTFPSCAQVRQYLEDYAVRFNLVRYVRFGHEVTAVGPSKSGGWEVTFTSNSTAGDASAEKAQKTTDVFDKCIIASGIFVTPYFPPPEKVRGITAAVENGWATHSGAYRDPEQFSGKSVLVVGCAFSGAEIASGLTETVEKCVVATGGASVFLPRVFSMPVPNPDKQPATLADAPSVSVGDVNDGGVSSASVGEEGSARCATTETRTGGCGHSCGVASGGHTSPESTAYGMPLDLVLYSLKAAAGESAKNLSAAEKLRGLRTYCLHLAGQDPGDVHEALRLENGPNVSTSVAISEAFLSKVRDGFIEVKPRLIALDVQESKAHFSDGTSEHVDHVICCTGLRPKIGFLPANILEQYEFDESDSVQPILLHALTWNPCIPNLAFVGVYRAPYFGVVELQARWVARMWSGAVPPPTAEICAAGLQERRDVRNAQPRSQFASG-YVEVMEALAEVAGLVPSQDWSASTARDGRYGPDNDINTDDVDANHAPKMQRSVELS 1572
            G   W+S  +TNLSK +C FSDF WP+    FP    V  YL+ YA  F L R  R    V  V P+    W VT  +N           ++ T  FD  ++A+G+F  P+ P  + +      + +    +S    +   F+ K VL+VG AFSG EIA  ++   +K VV       F+PR                                                                    P S A   P DLV Y+ +    ++  NL         RTY   + G DPG V   L  ++      +V  S+ FL+ V DG +  K R  A    +    +SDGT + +D V+ CTG    + FL   IL   EFD  D +QP+LLH   ++P +P LAFVG YR PYF V+ELQ+RWVAR+ +G   PP+     AG++  R +RN +PR QF  G YV + +  A   G+ P     A  A     GP    N   V  N  P++ R++ LS
Sbjct:   44 GRGAWSSYARTNLSKFSCVFSDFTWPQRTDVFPMRRSVIDYLKAYAAEFRLARCFRMNTRVETVAPAGPHRWRVTTLAN----------GRRETREFDWVVVATGVFSRPFVPDFDGLPSFQGKIYHAADCYSEEV-NRANFTDKRVLIVGAAFSGTEIAGQISGFAKKTVVGLRNPMWFVPR-----------------------------------------------------------------WVKPWSGAPLFPADLVFYTRQP---DNPMNLRP-------RTYLKEMGG-DPGLVCRDLAFDSLETAPMTVVTSDDFLALVGDGKVVAK-RSRAFAFDDKGVLYSDGTRDDLDAVVMCTGYSSALPFLSPEILAAVEFDPRDQLQPVLLHHQVFHPDLPGLAFVGYYRGPYFPVMELQSRWVARIAAGETAPPSLAEMRAGVEIERVIRNRRPRPQFPHGDYVRLADGFAREVGVFPEGADVADMAARLTEGPMVAANFRLVGPNAKPQLARAIMLS 480          
BLAST of mRNA_M-pyrifera_M_contig7960.18685.1 vs. uniprot
Match: A0A6B2L360_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L360_9EUKA)

HSP 1 Score: 192 bits (489), Expect = 1.530e-51
Identity = 153/490 (31.22%), Postives = 220/490 (44.90%), Query Frame = 1
Query:    7 GRVWTSMKTNLSKHTCCFSDFRWPEDAPTFPSCAQVRQYLEDYAVRFNLVRYVRFGHEVTAVG--PSKSGGWEVTFTSNSTAGDASAEKAQKTTDVFDKCIIASGIFVTPYFPPPEKVRGITAAVENGWATHSGAYRDPEQFSGKSVLVVGCAFSGAEIASGLTETVEKCVVATGGASVFLPRVFSMPVPNPDKQPATLADAPSVSVGDVNDGGVSSASVGEEGSARCATTETRTGGCGHSCGVASGGHTSPESTAYGMPLDLVLYSLKAAAGESAKNLSAAEKLRGLRTYCLHLAGQDPGDVHEALRLENGPNVSTSVAISEAFLSKVRDGFIEVKPRLIALDVQESKAHFSDGTSEHVDHVICCTGLRPKIGFLPANILEQYEFDESDSVQPILLHALTWNPCIPNLAFVGVYRAPYFGVVELQARWVARMWSGAVPPPTAEICAAGLQERRDVRNA--QPRSQFASG-YVEVMEALAEVAGLVPSQD 1461
            G VW SM TNLS+++C FSDF W E    FP   +V +YL +YA  FNL+ Y+ F   V  V   PSK   W + +T       A A  AQ+    FD  ++ SG F  P  P    +      V      H   Y+  + F  K VLVVG A+SGAEIAS +++   K  VA       LPR  +      D Q                                                               +P+DL+ Y+ K    ES  NL+  E+ +   +Y   + G D   +H  L ++        V I++ FL+ V+   I+V P L     + + A F D T   VD VI  TG +  + F   +IL+  ++ E D  QP++LH   ++P +  +AFVG+YR PYFG +E+QA WV  ++SG   PPT +   AGL + R +R+     R QF  G YV++M+ +A+   L P+QD
Sbjct:   31 GHVWESMTTNLSRYSCAFSDFPWKEGG-MFPLGREVLRYLSEYAAHFNLLPYLHFNCCVQKVDRQPSK---WVIHYT------QAGAPHAQE----FDFLVVCSGFFSNPVLPAVAGLPDFPGPV-----MHCSQYKTNKPFKEKRVLVVGGAYSGAEIASEISQVASKTYVAIRRPQYILPRYVN----TKDFQQ--------------------------------------------------------------LPIDLLFYTRK----ES--NLTPEERNKIKHSYFESICG-DLSKLHPLLAIDKSQ--PPFVTINDTFLAAVQQNTIQVCPGL--KHFEGNSAVFDDNTKLEVDMVIFATGYQLALPFFDEHILKVVDYHEKDKFQPLILHETVFHPELKGMAFVGMYRGPYFGTIEMQAHWVCSVFSGKTEPPTEQEMRAGLLQERALRDLPEHKRDQFPHGNYVQIMDLIAKKVHLYPTQD 424          
BLAST of mRNA_M-pyrifera_M_contig7960.18685.1 vs. uniprot
Match: A0A6A8QHD0_9PROT (SidA/IucD/PvdA family monooxygenase n=1 Tax=Telmatospirillum sp. TaxID=2079197 RepID=A0A6A8QHD0_9PROT)

HSP 1 Score: 190 bits (482), Expect = 3.320e-50
Identity = 149/492 (30.28%), Postives = 215/492 (43.70%), Query Frame = 1
Query:    4 GGRVWTSM-KTNLSKHTCCFSDFRWPEDAPTFPSCAQVRQYLEDYAVRFNLVRYVRFGHEVTAVGPSKSGGWEVTFTSNSTAGDASAEKAQKTTDVFDKCIIASGIFVTPYFPPPEKVRGITAAVENGWATHSGAYRDP----EQFSGKSVLVVGCAFSGAEIASGLTETVEKCVVATGGASVFLPRVFSMPVPNPDKQPATLADAPSVSVGDVNDGGVSSASVGEEGSARCATTETRTGGCGHSCGVASGGHTSPESTAYGMPLDLVLYSLKAAAGESAKNLSAAEKLRGLRTYCLHLAGQDPGDVHEALRLENGPNVSTSVAISEAFLSKVRDGFIEVKPRLIALDVQESKAHFSDGTSEHVDHVICCTGLRPKIGFLPANILEQYEFDESDSVQPILLHALTWNPCIPNLAFVGVYRAPYFGVVELQARWVARMWSGAVPPPTAEICAAGLQERRDVRNAQPRSQFASG-YVEVMEALAEVAGLVPSQD 1461
            G   W+S+ +TNLS H+C FSDF WP     FP  ++V +YL  YA  F L  ++RFG  V AV      GW V      T+G A   ++      F   I+ASG F  P+ PP     G+++    G   HS     P     +F G  VLVVG AFSG EIAS L +  ++ +V       F+PR ++  +P   +                                                                 PLDLV+YS  A             K   +R +   +AG D                  ++AI++ FL ++  G + VK R   +    +   F+DG+   VD V+ CTG    + F  +++L+   F   D  QP+LLH   ++P +P L FVG YR PYF V+ELQARW+A + +G +PPP+    A G+   R +R+ QPR QF  G +V++ + LA   G+ P  D
Sbjct:   44 GRGAWSSLGRTNLSYHSCAFSDFPWPAGTDVFPQRSEVGRYLTAYAEAFGLTPHIRFGTRVLAVRRDDDAGWRVAAR---TSGGAMESQS------FPHVIVASGFFARPHTPP---FPGLSSY--RGQIFHSADCDSPVVMGHRFHGLRVLVVGAAFSGTEIASQLIQYADEVIVTFRNPMWFVPR-WAQALPRGRRH----------------------------------------------------------------PLDLVMYSRWA---------DLPVKRDPVR-FLSRVAG-DXXXXXXXXXXXXXXAPPATIAITDEFLRQIGAGLLSVK-RSSGITFAATGVRFADGSRRDVDAVVMCTGYTATLPFFDSDLLDILAFHAGDQFQPLLLHRDMFHPALPGLFFVGQYRGPYFPVMELQARWIAGIAAGLMPPPSDAEMAEGIAVSRRLRHKQPRPQFPHGDFVDLADGLARTIGVYPHLD 444          
BLAST of mRNA_M-pyrifera_M_contig7960.18685.1 vs. uniprot
Match: I3TXE4_TISMK (Dimethylaniline monooxygenase [N-oxide-forming] 5 n=6 Tax=Tistrella TaxID=171436 RepID=I3TXE4_TISMK)

HSP 1 Score: 190 bits (483), Expect = 4.550e-50
Identity = 150/484 (30.99%), Postives = 225/484 (46.49%), Query Frame = 1
Query:    7 GRVWTSMKTNLSKHTCCFSDFRWPEDAPTFPSCAQVRQYLEDYAVRFNLVRYVRFGHEVTAVGPSKSGGWEVTFTSNSTAGDASAEKAQKTTDVFDKCIIASGIFVTPYFPPPEKVRGITAAVENGWATHSGAYRDPEQFSGKSVLVVGCAFSGAEIASGLTETVEKCVVATGGASVFLPRVFSMPVPNPDKQPATLADAPSVSVGDVNDGGVSSASVGEEGSARCATTETRTGGCGHSCGVASGGHTSPESTAYGMPLDLVLYSLKAAAGESAKNLSAAEKLRGLRTYCLHLAGQDPGDVHEALRLENGPNVSTSVAISEAFLSKVRDGFIEVKPRLIALDVQESKAHFSDGTSE-HVDHVICCTGLRPKIGFLPANILEQYEFDESDSVQPILLHALTWNPCIPNLAFVGVYRAPYFGVVELQARWVARMWSGAVPPPTAEICAAGLQERRDVRNAQPRSQFA-SGYVEVMEALAEVAGLVP 1452
            G VW S++TNLS+++C FSD       P FP   +V  YL  YA RF L   +R GH V AV P ++ G+ +            A+   +T D  D  I+ASG+F     P     +G+T     G   H+ AYRDP  F+GK V V+G AFSGA+IA+ +    E+ V+     + ++PR   + +P     PA   D                                                   +     +P+DLV+ S   A   +A + + A + R    Y   +AG D   +H  L +    +++  + IS+A  + VR G +E+     A+D   ++    +G  E   D +IC TG RP +  L   ILE   +D  D +QP+LL    +   +P+LAFVG+YR PYFGV+ELQARW A + +G +P P        +   R +R+ +PR QF  + Y  + +ALAE  G++P
Sbjct:   62 GLVWNSLRTNLSRYSCVFSDHPHDRTTPLFPEGRRVAAYLAGYAARFGLDEAIRPGHRVMAVIP-RTPGFRLMV---------EADGRIETHDT-DAVIVASGVFAEALMP-----QGLTIG---GAVMHAAAYRDPAVFAGKRVAVLGSAFSGADIAAEIAGVAERTVMLMRRPAWYVPRAVPV-LPEAGFMPADAGD---------------------------------------------------DRIRLRLPMDLVINSRARAQRLAALDGATAGRERWSWLY--GIAG-DQRRLHPLLDVPED-DLAAPMVISDALPAAVRSGRLELAR---AVDFDPARLTLQEGGRESRFDVLICATGYRPSLAMLAPGILEAIGYDPHDRLQPVLLGHCVFPEGVPDLAFVGMYRGPYFGVMELQARWAAAVLAGKLPRPDPLDLERAVAAERTIRDVRPRPQFPHADYPAMCDALAEKLGVMP 467          
BLAST of mRNA_M-pyrifera_M_contig7960.18685.1 vs. uniprot
Match: R1BSZ2_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BSZ2_EMIHU)

HSP 1 Score: 189 bits (480), Expect = 5.010e-50
Identity = 148/489 (30.27%), Postives = 202/489 (41.31%), Query Frame = 1
Query:    7 GRVWTSMKTNLSKHTCCFSDFRWPEDAPTFPSCAQVRQYLEDYAVRFNLVRYVRFGHEVTAVGPSKSG-GWEVTFTSNSTAGDASAEKAQKTTDVFDKCIIASGIFVTPYFPPPEKVRGITAAVENGWATHSGAYRDPEQFSGKSVLVVGCAFSGAEIASGLTETVEKC-VVATGGASVF-LPRVFSMPVPNPDKQPATLADAPSVSVGDVNDGGVSSASVGEEGSARCATTETRTGGCGHSCGVASGGHTSPESTAYGMPLDLVLYSLKAAAGESAKNLSAAEKLRGLRTYCLHLAGQDPGDVHEALRLENGPNVSTS----VAISEAFLSKVRDGFIEVKPRLIALDVQESKAHFSDGTSEHVDHVICCTGLRPKIGFLPANILEQYEFDESDSVQPILLHALTWNPCIPNLAFVGVYRAPYFGVVELQARWVARMWSGAVPPPTAEICAAGLQERRDVRNAQPRSQFASGYVEVMEALAEVAGLVP 1452
            G+VW S++TNLSKHTC FSDF WP  A  FP    V  YLE YA  F L   +  G  VT V  +  G G+ V + S         E+A+     F+  IIA+G+F  P+ P   ++ G    V      H+  YRD   F+G+  LV+G AFSGA+ A+ +    E   +VA+G A ++ LPR+                                                                         G P+DL LYS                  RG                    RLE  P+  T     VAI++     V  G + V+   +    +     F DG     D ++  TG R  + FL   + E  E+D  D +QP++ H   W P  PNLAFVG+YR PYFGV+ELQARW   +++G +P P+A   A GL   R +R   PR QF   Y  + + LA   G +P
Sbjct:   52 GKVWQSLRTNLSKHTCAFSDFPWPSTADDFPHAEDVADYLERYARTFGLHACIELGARVTLVQRASFGRGYCVRWVSQ-----GGTEQAE----TFEFAIIAAGVFSAPHVPA--ELHGFQNQV-----VHASQYRDSSDFAGRRCLVLGAAFSGADAAASIARVAESVTLVASGTAPLYYLPRLVD-----------------------------------------------------------------------GRPIDLALYS------------------RG--------------------RLEGLPSPRTDRKPRVAITDELSRAVSAGLLSVQTARVRA-CERGWVTFEDGRRAEFDVILAATGYRTAVNFLAPALSEAVEYDADDWLQPLIAHECVW-PAAPNLAFVGMYRGPYFGVLELQARWACGVFAGRLPMPSAGELADGLARERAIRQMDPRPQFPHDYPTMADDLARHVGALP 413          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7960.18685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU92_9PHAE6.390e-15146.01Reverse transcriptase domain-containing protein n=... [more]
D7FZL8_ECTSI2.060e-14847.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A813EY66_POLGL4.070e-6833.74Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S4PXJ1_9DINO5.530e-6634.36Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A2X3KK38_9ACTN3.050e-6030.54Uncharacterized protein n=1 Tax=Frankia sp. Ea1.12... [more]
A0A212JHN2_9PROT3.550e-5730.86Uncharacterized protein n=1 Tax=uncultured Alphapr... [more]
A0A6B2L360_9EUKA1.530e-5131.22Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A6A8QHD0_9PROT3.320e-5030.28SidA/IucD/PvdA family monooxygenase n=1 Tax=Telmat... [more]
I3TXE4_TISMK4.550e-5030.99Dimethylaniline monooxygenase [N-oxide-forming] 5 ... [more]
R1BSZ2_EMIHU5.010e-5030.27Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7960contigM-pyrifera_M_contig7960:3145..7929 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score441.8
Seed ortholog evalue4.7e-121
Seed eggNOG ortholog2880.D7FZL8
KEGG koko:K14003
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
EggNOG free text desc.N,N-dimethylaniline monooxygenase activity
EggNOG OGsCOG2072@1,KOG1399@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons9
Model size1689
Cds size1665
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7960.18685.1prot_M-pyrifera_M_contig7960.18685.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7960 3145..7905 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816699.6627958-CDS-M-pyrifera_M_contig7960:3144..33661622816699.6627958-CDS-M-pyrifera_M_contig7960:3144..3366Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 3145..3366 -
1692278127.06382-CDS-M-pyrifera_M_contig7960:3144..33661692278127.06382-CDS-M-pyrifera_M_contig7960:3144..3366Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 3145..3366 -
1622816699.6773994-CDS-M-pyrifera_M_contig7960:3480..35461622816699.6773994-CDS-M-pyrifera_M_contig7960:3480..3546Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 3481..3546 -
1692278127.0776954-CDS-M-pyrifera_M_contig7960:3480..35461692278127.0776954-CDS-M-pyrifera_M_contig7960:3480..3546Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 3481..3546 -
1622816699.694168-CDS-M-pyrifera_M_contig7960:4133..42511622816699.694168-CDS-M-pyrifera_M_contig7960:4133..4251Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 4134..4251 -
1692278127.089387-CDS-M-pyrifera_M_contig7960:4133..42511692278127.089387-CDS-M-pyrifera_M_contig7960:4133..4251Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 4134..4251 -
1622816699.709871-CDS-M-pyrifera_M_contig7960:4538..47441622816699.709871-CDS-M-pyrifera_M_contig7960:4538..4744Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 4539..4744 -
1692278127.1053016-CDS-M-pyrifera_M_contig7960:4538..47441692278127.1053016-CDS-M-pyrifera_M_contig7960:4538..4744Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 4539..4744 -
1622816699.725868-CDS-M-pyrifera_M_contig7960:5226..53191622816699.725868-CDS-M-pyrifera_M_contig7960:5226..5319Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 5227..5319 -
1692278127.1256366-CDS-M-pyrifera_M_contig7960:5226..53191692278127.1256366-CDS-M-pyrifera_M_contig7960:5226..5319Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 5227..5319 -
1622816699.7415526-CDS-M-pyrifera_M_contig7960:5508..58681622816699.7415526-CDS-M-pyrifera_M_contig7960:5508..5868Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 5509..5868 -
1692278127.143233-CDS-M-pyrifera_M_contig7960:5508..58681692278127.143233-CDS-M-pyrifera_M_contig7960:5508..5868Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 5509..5868 -
1622816699.759613-CDS-M-pyrifera_M_contig7960:5961..61011622816699.759613-CDS-M-pyrifera_M_contig7960:5961..6101Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 5962..6101 -
1692278127.15588-CDS-M-pyrifera_M_contig7960:5961..61011692278127.15588-CDS-M-pyrifera_M_contig7960:5961..6101Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 5962..6101 -
1622816699.7717748-CDS-M-pyrifera_M_contig7960:6571..69491622816699.7717748-CDS-M-pyrifera_M_contig7960:6571..6949Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 6572..6949 -
1692278127.169919-CDS-M-pyrifera_M_contig7960:6571..69491692278127.169919-CDS-M-pyrifera_M_contig7960:6571..6949Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 6572..6949 -
1622816699.7831814-CDS-M-pyrifera_M_contig7960:7823..79051622816699.7831814-CDS-M-pyrifera_M_contig7960:7823..7905Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 7824..7905 -
1692278127.1815517-CDS-M-pyrifera_M_contig7960:7823..79051692278127.1815517-CDS-M-pyrifera_M_contig7960:7823..7905Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7960 7824..7905 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816699.794529-UTR-M-pyrifera_M_contig7960:7905..79291622816699.794529-UTR-M-pyrifera_M_contig7960:7905..7929Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7960 7906..7929 -
1692278127.1963875-UTR-M-pyrifera_M_contig7960:7905..79291692278127.1963875-UTR-M-pyrifera_M_contig7960:7905..7929Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7960 7906..7929 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7960.18685.1

>prot_M-pyrifera_M_contig7960.18685.1 ID=prot_M-pyrifera_M_contig7960.18685.1|Name=mRNA_M-pyrifera_M_contig7960.18685.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=555bp
MKTNLSKHTCCFSDFRWPEDAPTFPSCAQVRQYLEDYAVRFNLVRYVRFG
HEVTAVGPSKSGGWEVTFTSNSTAGDASAEKAQKTTDVFDKCIIASGIFV
TPYFPPPEKVRGITAAVENGWATHSGAYRDPEQFSGKSVLVVGCAFSGAE
IASGLTETVEKCVVATGGASVFLPRVFSMPVPNPDKQPATLADAPSVSVG
DVNDGGVSSASVGEEGSARCATTETRTGGCGHSCGVASGGHTSPESTAYG
MPLDLVLYSLKAAAGESAKNLSAAEKLRGLRTYCLHLAGQDPGDVHEALR
LENGPNVSTSVAISEAFLSKVRDGFIEVKPRLIALDVQESKAHFSDGTSE
HVDHVICCTGLRPKIGFLPANILEQYEFDESDSVQPILLHALTWNPCIPN
LAFVGVYRAPYFGVVELQARWVARMWSGAVPPPTAEICAAGLQERRDVRN
AQPRSQFASGYVEVMEALAEVAGLVPSQDWSASTARDGRYGPDNDINTDD
VDANHAPKMQRSVELSLFSEALAEICPDGKAEEAMLVLKEWLWSGPLLPC
HYRIR
back to top

mRNA from alignment at M-pyrifera_M_contig7960:3145..7929-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7960.18685.1 ID=mRNA_M-pyrifera_M_contig7960.18685.1|Name=mRNA_M-pyrifera_M_contig7960.18685.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4785bp|location=Sequence derived from alignment at M-pyrifera_M_contig7960:3145..7929- (Macrocystis pyrifera P11B4 male)
AGTGGCGGGCGCGTGTGGACGTCGATGAAGACGAACCTGTCGAAGCACAC TTGCTGCTTTTCAGACTTCCGCTGGCCTGAAGATGCCCCTACGTTCCCCT CTTGCGGTGAGCAGGCCACGCGGTATGGCACAGTACGATACCGATGGTAC CCGTACGGCACCGATAGTACCGTACGGCATTGATGTTTCTGATGCTGCAG TAGAGTTTATTGTATGCGTCCTGATGCTTCCGGTGTGCCAACACCTTGTG TGGAAAAGTGCGGGCTTGCGCTTTGGGGTGTTCAGGAAATAAGTTTTGCA GGCGGGATAGCTACTGGAGTATAAGCTGTGACAGAGATGTCGCACTGACG ATATGAACCATTGCATAGCACACAATAACAACTAGGAGTGCTGTATCAGT TTTAGTAATAGCACCCGTGCAAGTCCCATACAGCCGTACTTGTATATTGC TGTAGTACCGGAAATAAACACCAACATTGTTGGTTGTGGGTATGTTGGTG GTGTGAATAGCAGACGTGTTGAAGGAACCGATGGCACCTCAACCTCAGCG GGTTACGCGTGCAGAACTCCGTGTCCACAGGCAAAATATCCTTCAGAAAT AGTACATCCCATTGAGCCTATTGTTCCACATGCTTGAAGTTTTGTCGCGC CTCCGTAGTCCTCTTCTGACCACCTAGAACACCTCATCCTCGTGCTTGTC GATGATCTCAGGGCGTAAAGCCATGCCGTGCAACCTTTGCCCATCGGCCG TTGTTTCAAGACTGCCCTGCAGGTCGAGAGGACTTTTTAAGCGCACATAA ATGTAGTGGCCGAGCCTGCCTGGTTTGCAGCTGCAAAGCGGAAGCTTCCA TCATCGCAGTGTCACTCATGTTCCCGCACGCACAGCCGTGCATCCCATTG AAATTTGCTTCCCTCTTCCCGTGCGCTTTGATACTGTGTTTTGTGTTGTG TATTCAACAATGCACGTCCCGTAAACGAAGCTCAAGTCAGACAGTACCTC GAGGACTACGCCGTGCGCTTCAATCTTGTGCGCTACGTGCGGTTCGGCCA TGAGGTCACCGCAGTCGGACCGTCCAAGTCCGGCGGGTGGGAGGTGACCT TTACCTCAAATTCTACTGCTGGTGACGCAAGCGCGGAGAAGGCTCAAAAG ACGACAGACGTGTTCGACAAGTGCATAATTGCGTCGGGAATTTTCGTCAC ACCTTACTTTCCTCCGCCGGAAAAAGTGAGAGGAATCACGGCCGCGGTGG AGAACGGATGGGCCACGCATAGCGGAGCATACCGGGACCCCGAACAATTC TCTGGAAAATCGGTCCTAGTGGTTGGCTGCGCATTCAGTGGTGCAGAGAT CGCTTCTGGTGAGGGGTACCAGGTAGTTTTACTGATGTACAGTATACCTA CAGCAATACGGCATTATGTGAGGTGGAAGAGAGGTACGGCCTACTACCTG CCTGGCGTTGTTTTTGAGTTCCTACTGTTTGTGAAACAGCGAAAGGCCTC GTGGACGAGTATGCACAGACGGCACATTATCGCTGACGCTGCTGCTACTA CTTCCCGTACTATTTACAAATACGTCCAGGTTGTACCATGAACAGTACTA TAGCAGTTTAGCACAACGAATTGCGACGCCGACTCTCGACGAGGCATATC CGTGGTAAGGCCAAATGCACATACATTTTGCTCTATCCATACTGTAGTCT AGGTAAAATAGGGACTACCATGAAACGTTGCCGTGCATTTCAAGCATTTT CCGGTGGTCAATACCAGACCGAACAAAACACGACCTCCCCCCCCGCGCGC TCCCGTCCATATATCTCGACCCCCCCAGGTCTGACTGAAACAGTAGAGAA ATGCGTGGTAGCCACCGGCGGGGCATCGGTGTTTCTTCCCCGTGTTTTCT CGATGCCGGTGCCGAATCCGGACAAACAACCTGCTACCCTAGCCGACGCG CCAAGCGTTAGCGTGGGAGTCAAGGTGGAGCACAACACCAGCAGCACCCC CTCTGCTAGTTTGACCGACACCAGCAGCACTCCCTCTGCCAGTTTGACCG TGGCGTGTAAGGATGTCAATGATGGAGGCGTGTCTAGCGCTTCGGTTGGC GAAGAGGGCTCAGCCAGGTGTGCCACAACAGAAACTCGTACAGGTGGCTG TGGTCACTCTTGCGGGGTGGCAAGTGGGGGCCATACCAGCCCGGAGTCGA CGGCTTACGGGATGCCTTTAGACCTTGTTTTGTACTCGCTAAAGGCCGCC GCAGGCGAGTCAGCGAAGAATTTGTCTGCGGCAGAGAAGCTAAGGGGGCT TCGGACGTATTGCCTTCATTTGGCTGGCCAGGACCCCGGCGACGTGCATG AAGCGCTGCGGCTTGAGAACGGGCCCAACGTGTCGACCAGTGTAGCCATA TCGGAGGCCTTCCTGAGCAAGGTTCGTTGCAGCTATGCGCTACGGTTGTA CCGGTGTATAATGTTGCACGCTAACACGTGCGCGGCTCCGACCCAGAAGC ACGGCTTGCGTGCTCCATCCGCCGTGGGATGCCTTGAGGGCGCCAGAACA CATTGTACATATTGCCCAGCTGTCTCGGTGTTTGTCGCAAATGAACTGCT TGTTCTTCAGGTACGGGACGGTTTCATTGAAGTGAAACCAAGGTTGATCG CTCTCGACGTCCAAGAAAGCAAAGCTCACTTCTCGGATGGGACCAGCGAA CACGTGAGACTCCTGGGTACTGTGACGCGCATATATTCAAGCTCTTGTAC GATTGTGTCACCAGAAGATCACGAACGATCAGCCAGCGCATTGCGGCAAA ACGACGAGTTCTTCCGCATGCTGTAAGTAAACACCAACTTTCAAAAACCG CAGCAGTAATTTGCACCGCTCTGTCCCGAAATAAAAGGACAGTTGGTATA TTGATATCTAACTCGAATGATCCTTACATCTCCGGGAACATTTGTATTGC TTTTGCGACGACCTGTGGTAATGGCCTCTACTTCACAGCTCCTGTATGTC GTACCTTCCTCGTTCTTTATTGTCGTAGCGAGCTGGCCCTTTGCTCGTTC GCAGACGCCCCACCCCTTCCGATCTGAAGCAGTGTCAGGTGACACTGTAC CGGAAAGCATCGGCAACGCATTCGAAGTGTCCCAGTCATACCATCCTACC CTACCCTCTCGGTCAACCTGCTCGCCACCCAACAGGTCGACCACGTTATT TGCTGTACTGGACTGCGCCCGAAAATCGGCTTTTTGCCCGCGAACATTCT TGAGCAGTACGAGTTCGATGAGAGCGACTCGGTTCAGCCTATTCTGCTTC ATGCTCTAACGTGGAACCCTTGCATTCCGAACCTGGCATTCGTCGGGGTG TACAGGGCGCCGTATTTCGGGGTGGTAGAGCTTCAGGCGCGGTGAGAGGT TTGCAATACTCAATAATATTATCCGAGACGTACCCGTGCCCGCGAATCGT GTGCTCGCTCGTGGTCTTGCTGGGCATGCGCCGGTGGTTTCGAAGCAATT CTTGCACTACTGACAAAACGAAATGGAACAATGGTCATAAATGTATTGGC TACGGATATCATTTCAGGAGTTCGTTTGCCTGGTCGGTGGATACGTTCCG GGCATATTGATCAGCAATCGTGGGCACACTCTTTATTGCTGTGACCCCGG GAGCACCATGCTACTCGTTGTGCCACAGGTGGGTGGCGAGAATGTGGAGT GGCGCGGTACCCCCGCCGACCGCCGAAATATGCGCAGCAGGCCTCCAGGA GAGACGGGACGTCAGGAACGCTCAGCCTCGTTCTCAATTTGCGTCGGTGG GAAAGGGTGTCCGCCCCGCCCGTGATCACTACTGCAACAACGTACTCGTA CACCTAATACGTCGTTAAGTAGTGTAGCACCTTGACAGCGCGGTCGCTCT ATGAGTGCTACAGACGGGGAGGCAACAGCCGCATCAGTAGCAGTAGCAGA ATTACAATTATACTTATGTTAACAAAGTCTTACTATTCATACACCACTGT ATCATTGAGGCAGTGCCATACGTCCTCAGCCCCCAGCTGCGGGCCCCGGA GGTGGTTACTTCTTCCCGTTTCAAAGGTGGTTGGCGCGACATTTCCTGCG CTTGAATCTTGCAGCCGGAACTCGGGCGAGGGTATCGTAGTCAGGGCCTT GCGTGCTACACTCGAAGCGGTAGAAGTACGACTGATACAGCAGTAACGGG TAGCCATGGAAGTGAAGCAGGGTACAGGTAGGCTTGCCGTGATAGATACT TGTCATCGTGAGCACTATCTGTGAGTCTTGCGATGTACTCACATCACCAT TGAATACTATTCGCCAAACATGCCTTGCACGAATATCGAAGTTTAAAATA AATCATAAACTTCGAAAATCTCGCTTGCCGCAGGGCTACGTGGAGGTCAT GGAAGCCCTTGCGGAAGTGGCTGGTCTGGTGCCTTCGCAAGATTGGTCGG TCCACGCGGGAGATGATTCTCCTTTCTTCCAAGAAGCTACTGAATCACCT GATCGTGGTGGTACAATGGGCCTCTACGGATCTCTTCCCCCTCTTCCCGA AGCAGGAACGCAGGCGTCGACGGCGAGGGATGGCCGCTACGGGCCGGATA ACGACATCAACACAGATGACGTGGATGCCAACCACGCTCCGAAAATGCAA CGCTCAGTGGAGTTGTCGTTGTTTTCCGAAGCCTTAGCAGAAATATGTCC CGATGGGAAAGCGGAGGAGGCCATGCTGGTGCTCAAGGAGTGGCTGTGGA GCGGGCCCCTTCTGCCTTGTCACTACCGCATTCGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig7960:3145..7929-

>mRNA_M-pyrifera_M_contig7960.18685.1 ID=mRNA_M-pyrifera_M_contig7960.18685.1|Name=mRNA_M-pyrifera_M_contig7960.18685.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3330bp|location=Sequence derived from alignment at M-pyrifera_M_contig7960:3145..7929- (Macrocystis pyrifera P11B4 male)
ATGAAGACGAACCTGTCGAAGCACACTTGCTGCTTTTCAGACTTCCGCTG
GCCTGAAGATGCCCCTACGTTCCCCTCTTGCGATGAAGACGAACCTGTCG
AAGCACACTTGCTGCTTTTCAGACTTCCGCTGGCCTGAAGATGCCCCTAC
GTTCCCCTCTTGCGCTCAAGTCAGACAGTACCTCGAGGACTACGCCGTGC
GCTTCAATCTTGTGCGCTACGTGCGGTTCGGCCATGAGGTCACCGCAGTC
GGACCGTCCAAGTCCGGCGGGTGGGAGGTGACCTTTACCTCAAATTCTAC
TGCTGGTGACGCAAGCGCGGAGAAGGCTCAAAAGACGACAGACGTGTTCG
ACAAGTGCATAATTGCGTCGGGAATTTTCGTCACACCTTACTTTCCTCCG
CCGGAAAAAGTGAGAGGAATCACGGCCGCGGTGGAGAACGGATGGGCCAC
GCATAGCGGAGCATACCGGGACCCCGAACAATTCTCTGGAAAATCGGTCC
TAGTGGTTGGCTGCGCATTCAGTGGTGCAGAGATCGCTTCTGCTCAAGTC
AGACAGTACCTCGAGGACTACGCCGTGCGCTTCAATCTTGTGCGCTACGT
GCGGTTCGGCCATGAGGTCACCGCAGTCGGACCGTCCAAGTCCGGCGGGT
GGGAGGTGACCTTTACCTCAAATTCTACTGCTGGTGACGCAAGCGCGGAG
AAGGCTCAAAAGACGACAGACGTGTTCGACAAGTGCATAATTGCGTCGGG
AATTTTCGTCACACCTTACTTTCCTCCGCCGGAAAAAGTGAGAGGAATCA
CGGCCGCGGTGGAGAACGGATGGGCCACGCATAGCGGAGCATACCGGGAC
CCCGAACAATTCTCTGGAAAATCGGTCCTAGTGGTTGGCTGCGCATTCAG
TGGTGCAGAGATCGCTTCTGGTCTGACTGAAACAGTAGAGAAATGCGTGG
TAGCCACCGGCGGGGCATCGGTGTTTCTTCCCCGTGTTTTCTCGATGCCG
GTGCCGAATCCGGACAAACAACCTGCTACCCTAGCCGACGCGCCAAGCGT
TAGCGTGGGAGTCTGACTGAAACAGTAGAGAAATGCGTGGTAGCCACCGG
CGGGGCATCGGTGTTTCTTCCCCGTGTTTTCTCGATGCCGGTGCCGAATC
CGGACAAACAACCTGCTACCCTAGCCGACGCGCCAAGCGTTAGCGTGGGA
GATGTCAATGATGGAGGCGTGTCTAGCGCTTCGGTTGGCGAAGAGGGCTC
AGCCAGGTGTGCCACAACAGAAACTCGTACAGGTGGCTGTGGTCACTCTT
GCGGGGTGGCAAGTGGGGGCCATACCAGCCCGGAGTCGACGGCTTACGGG
ATGCCTTTAGACCTTGTTTTGTACTCGCTAAAGGCCGCCGCAGGCGAGTC
AGCGAAGAATTTGTCTGCGGCAGAGAAGCTAAGGGGGCTTCGGACGTATT
GCCTTCATTTGGCTGGCCAGGACCCCGGCGACGTGCATGAAGCGCTGCGG
CTTGAGAACGGGCCCAACGTGTCGACCAGTGTAGCCATATCGGAGGCCTT
CCTGAGCAAGGATGTCAATGATGGAGGCGTGTCTAGCGCTTCGGTTGGCG
AAGAGGGCTCAGCCAGGTGTGCCACAACAGAAACTCGTACAGGTGGCTGT
GGTCACTCTTGCGGGGTGGCAAGTGGGGGCCATACCAGCCCGGAGTCGAC
GGCTTACGGGATGCCTTTAGACCTTGTTTTGTACTCGCTAAAGGCCGCCG
CAGGCGAGTCAGCGAAGAATTTGTCTGCGGCAGAGAAGCTAAGGGGGCTT
CGGACGTATTGCCTTCATTTGGCTGGCCAGGACCCCGGCGACGTGCATGA
AGCGCTGCGGCTTGAGAACGGGCCCAACGTGTCGACCAGTGTAGCCATAT
CGGAGGCCTTCCTGAGCAAGGTACGGGACGGTTTCATTGAAGTGAAACCA
AGGTTGATCGCTCTCGACGTCCAAGAAAGCAAAGCTCACTTCTCGGATGG
GACCAGCGAACACGTACGGGACGGTTTCATTGAAGTGAAACCAAGGTTGA
TCGCTCTCGACGTCCAAGAAAGCAAAGCTCACTTCTCGGATGGGACCAGC
GAACACGTCGACCACGTTATTTGCTGTACTGGACTGCGCCCGAAAATCGG
CTTTTTGCCCGCGAACATTCTTGAGCAGTACGAGTTCGATGAGAGCGACT
CGGTTCAGCCTATTCTGCTTCATGCTCTAACGTGGAACCCTTGCATTCCG
AACCTGGCATTCGTCGGGGTGTACAGGGCGCCGTATTTCGGGGTGGTAGA
GCTTCAGGCGCGGTCGACCACGTTATTTGCTGTACTGGACTGCGCCCGAA
AATCGGCTTTTTGCCCGCGAACATTCTTGAGCAGTACGAGTTCGATGAGA
GCGACTCGGTTCAGCCTATTCTGCTTCATGCTCTAACGTGGAACCCTTGC
ATTCCGAACCTGGCATTCGTCGGGGTGTACAGGGCGCCGTATTTCGGGGT
GGTAGAGCTTCAGGCGCGGTGGGTGGCGAGAATGTGGAGTGGCGCGGTAC
CCCCGCCGACCGCCGAAATATGCGCAGCAGGCCTCCAGGAGAGACGGGAC
GTCAGGAACGCTCAGCCTCGTTCTCAATTTGCGTCGGTGGGTGGCGAGAA
TGTGGAGTGGCGCGGTACCCCCGCCGACCGCCGAAATATGCGCAGCAGGC
CTCCAGGAGAGACGGGACGTCAGGAACGCTCAGCCTCGTTCTCAATTTGC
GTCGGGCTACGTGGAGGTCATGGAAGCCCTTGCGGAAGTGGCTGGTCTGG
TGCCTTCGCAAGATTGGTCGGGCTACGTGGAGGTCATGGAAGCCCTTGCG
GAAGTGGCTGGTCTGGTGCCTTCGCAAGATTGGTCGGCGTCGACGGCGAG
GGATGGCCGCTACGGGCCGGATAACGACATCAACACAGATGACGTGGATG
CCAACCACGCTCCGAAAATGCAACGCTCAGTGGAGTTGTCGTTGTTTTCC
GAAGCCTTAGCAGAAATATGTCCCGATGGGAAAGCGGAGGAGGCCATGCT
GGTGCTCAAGGAGTGGCTGTGGAGCGGGCCCCTTCTGCCTTGTCACTACC
GCATTCGAGCGTCGACGGCGAGGGATGGCCGCTACGGGCCGGATAACGAC
ATCAACACAGATGACGTGGATGCCAACCACGCTCCGAAAATGCAACGCTC
AGTGGAGTTGTCGTTGTTTTCCGAAGCCTTAGCAGAAATATGTCCCGATG
GGAAAGCGGAGGAGGCCATGCTGGTGCTCAAGGAGTGGCTGTGGAGCGGG
CCCCTTCTGCCTTGTCACTACCGCATTCGA
back to top