mRNA_M-pyrifera_M_contig79558.18674.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79558.18674.1
Unique NamemRNA_M-pyrifera_M_contig79558.18674.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A6I6AAG1_9PLAN (Elongation factor Tu n=9 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AAG1_9PLAN)

HSP 1 Score: 517 bits (1332), Expect = 2.740e-183
Identity = 258/262 (98.47%), Postives = 261/262 (99.62%), Query Frame = 1
Query:    1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 786
            NKCDLVDDPELIELVELELREMLTHYGF GDEVPFIYGSAKLADARPDDP+ASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCE+TRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNY+EVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA
Sbjct:  132 NKCDLVDDPELIELVELELREMLTHYGFAGDEVPFIYGSAKLADARPDDPEASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEETRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYAEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 393          
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A518I6C4_9PLAN (Elongation factor Tu-B n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I6C4_9PLAN)

HSP 1 Score: 409 bits (1051), Expect = 1.500e-140
Identity = 199/262 (75.95%), Postives = 228/262 (87.02%), Query Frame = 1
Query:    1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 786
            NKCDLVDDP+LIELVE+E+R+MLT YGF GD+VPFI GSAK A   P D  A+RCIH+LL  LD  +PDP R+TD+PFLMS+ENVFSI GRG+VVTGKIEQG+IR G++VEI+GL ++TR D VT VESF+ALV+TG AGDNVGCLLRKT Y EVSRGQVLA  G+VTPYR+FEAEVYVLKKEEGGRHTPFF+GYTPQFFFRTTNVTGTA V G  D+A+PGDGVTL+V L  P+ALAEGDRFA+REG KTVGSGVVT+VIA
Sbjct:  132 NKCDLVDDPDLIELVEMEIRDMLTQYGFPGDDVPFIRGSAKQAHDHPADEGAARCIHQLLNALDRSIPDPVRMTDKPFLMSIENVFSISGRGTVVTGKIEQGEIRAGESVEILGLSDETRVDTVTQVESFSALVETGRAGDNVGCLLRKTGYDEVSRGQVLAVAGSVTPYRDFEAEVYVLKKEEGGRHTPFFNGYTPQFFFRTTNVTGTAMVLGDVDMALPGDGVTLSVSLTHPVALAEGDRFAVREGGKTVGSGVVTKVIA 393          
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A517W387_9PLAN (Elongation factor Tu n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W387_9PLAN)

HSP 1 Score: 392 bits (1006), Expect = 1.030e-133
Identity = 185/261 (70.88%), Postives = 223/261 (85.44%), Query Frame = 1
Query:    1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVI 783
            NKCDLVDDPELIELVE+ELRE+L+ YGF GDE+PFI GSAKLA   P D +AS+CI++LL  LDTY+PDP R+ D+PFLM +ENVF I GRG+VVTG+IE+G IR GD+VEI+GL    R D+VT VESF+ +++TGYAG+NVGCLLRKT Y EVSRGQVLAA G++T ++NFEAEVYVLKKEEGGRHTPFF+GYTPQFFFRTT+VTGTA V G  D+A+PGDGV L++ L  P+AL +GDRFA+REG KTVGSGV+T+VI
Sbjct:  132 NKCDLVDDPELIELVEMELRELLSRYGFPGDEIPFIRGSAKLAHDNPADKEASKCINQLLSALDTYIPDPDRMIDKPFLMPIENVFMIEGRGTVVTGRIEKGMIRTGDSVEIIGLTNQARVDIVTQVESFSEVLETGYAGNNVGCLLRKTRYDEVSRGQVLAATGSITSHQNFEAEVYVLKKEEGGRHTPFFNGYTPQFFFRTTDVTGTATVLGNVDMALPGDGVKLSISLKHPVALMDGDRFAVREGGKTVGSGVITKVI 392          
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A2S8F408_9BACT (Elongation factor Tu n=3 Tax=Blastopirellula TaxID=265487 RepID=A0A2S8F408_9BACT)

HSP 1 Score: 369 bits (946), Expect = 1.310e-124
Identity = 186/262 (70.99%), Postives = 213/262 (81.30%), Query Frame = 1
Query:    1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 786
            NKCDLV+D EL+ LVELE+RE+LTHYGF GD VP I GSAKLA   P DP ASRCI+ELL  LDT +PDP R  D+PFLM +ENVFSI GRG+VVTGKIEQG +R GDA+EIVGL + T +DVVT VESF  ++++G AG NVGCLLRKT + +V +GQVLAA G+VT  R FEAEVYVLKKEEGGRHTPFFDGYTPQFFFRT NVTG   V G A +A+PGDGV L V L QPIA+++GDRFAIREG KTVGSGVVT+V A
Sbjct:  132 NKCDLVEDAELLTLVELEVRELLTHYGFPGDTVPVIRGSAKLAHDAPSDPAASRCINELLHALDTAIPDPVRQVDKPFLMPIENVFSIAGRGTVVTGKIEQGTVRSGDAIEIVGLTDQTVSDVVTQVESFAEVLESGEAGANVGCLLRKTRHDQVHKGQVLAARGSVTLRRQFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTANVTGKTHVVGDAAMALPGDGVQLQVDLLQPIAVSQGDRFAIREGGKTVGSGVVTKVTA 393          
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A518GBD4_9BACT (Elongation factor Tu-A n=1 Tax=Aureliella helgolandensis TaxID=2527968 RepID=A0A518GBD4_9BACT)

HSP 1 Score: 369 bits (946), Expect = 1.310e-124
Identity = 185/262 (70.61%), Postives = 212/262 (80.92%), Query Frame = 1
Query:    1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 786
            NKCDLV+DPEL+ELVEL+LREMLT YG+ G EVP I GSAKLA   P D D+  CI+ELL+ LDT + DP R  D+PFLM +ENVFSI GRG+VVTGKIEQG +R GDA+EI+GL + T +DVVT VESF  ++++G AGDNVGCLLRKT + EV +GQVLAA G+VTP R FEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTG   V G   +AMPGDGV L V L QPIAL+ GD FAIREG KTVGSGVVT++ A
Sbjct:  132 NKCDLVEDPELLELVELDLREMLTQYGYAGAEVPVIRGSAKLAHDNPTDADSIACINELLQALDTTIADPVRQIDKPFLMPIENVFSIAGRGTVVTGKIEQGIVRSGDAIEIIGLTDQTVSDVVTQVESFAEILESGRAGDNVGCLLRKTAHDEVHKGQVLAARGSVTPRRQFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGKTHVIGDVQMAMPGDGVQLQVNLLQPIALSTGDHFAIREGGKTVGSGVVTKITA 393          
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A2A2WD71_9BACT (Elongation factor Tu n=15 Tax=Planctomycetes TaxID=203682 RepID=A0A2A2WD71_9BACT)

HSP 1 Score: 364 bits (935), Expect = 7.710e-123
Identity = 178/261 (68.20%), Postives = 213/261 (81.61%), Query Frame = 1
Query:    1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVI 783
            NKCDLV+D EL+ELVEL+LRE+L  YG+ G+  P I GSAK A   P +P+A  CI +LL+ LD ++PDP RL D+PFLM +ENV+SI GRG+VVTGKIEQG +R GD+VEI+GL   T TDV+T VESF  +++ G AGDNVG LLRKT ++E+++GQVLA VGT+TP+R FEAEVYVLKKEEGGRHTPFFDGY PQFFFRTTNVTG+A V G  D+AMPGDGV L V L QPIA+A GDRFAIREG +TVGSGVVTRV+
Sbjct:  139 NKCDLVEDAELLELVELDLRELLNEYGYDGEMTPVIRGSAKQAHDNPTNPEAIECIEQLLDALDRWIPDPVRLIDKPFLMPIENVYSIAGRGTVVTGKIEQGMVRAGDSVEILGLRSATATDVITQVESFGEVLEAGNAGDNVGVLLRKTAHNEITKGQVLARVGTLTPHREFEAEVYVLKKEEGGRHTPFFDGYAPQFFFRTTNVTGSANVLGGVDMAMPGDGVQLKVTLKQPIAVAGGDRFAIREGGRTVGSGVVTRVV 399          
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: M5SUT3_9BACT (Translation elongation factor Tu n=2 Tax=Rhodopirellula TaxID=265488 RepID=M5SUT3_9BACT)

HSP 1 Score: 364 bits (934), Expect = 1.060e-122
Identity = 175/262 (66.79%), Postives = 213/262 (81.30%), Query Frame = 1
Query:    1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 786
            NKCDLV+D EL++LVE++LREML+ YG+ GDEVP I GSAK A   P+DPDA+ CI  LL+ LD  +PDP RL DRPFL+ +ENV+SI GRG+VVTGKIEQG +R GDA+EI+GL  +T +DV+T VESF  ++  G AGDNVGCLLRKT ++ +++GQVLA  G+VTP+R FEAEVYVLKKEEGGRH PFFDGY PQFFFRTTNVTG+A V     +AMPGDGV L+V L QP+A+ +GD FAIREG KTVGSGVVTRV++
Sbjct:  138 NKCDLVEDSELLDLVEMDLREMLSEYGYPGDEVPVIRGSAKRAHDDPNDPDATACIERLLDALDRSIPDPVRLVDRPFLLPIENVYSIAGRGTVVTGKIEQGIVRAGDAIEIIGLSSETGSDVITQVESFGDVLQAGKAGDNVGCLLRKTAHTAITKGQVLAKAGSVTPHREFEAEVYVLKKEEGGRHMPFFDGYAPQFFFRTTNVTGSASVMDGVQMAMPGDGVRLSVALKQPVAITDGDHFAIREGGKTVGSGVVTRVVS 399          
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A847GMC7_9BACT (Elongation factor Tu n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GMC7_9BACT)

HSP 1 Score: 363 bits (932), Expect = 2.130e-122
Identity = 180/262 (68.70%), Postives = 208/262 (79.39%), Query Frame = 1
Query:    1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 786
            NKCDLVDDPELIELVE++LRE+LT YGF GDEVPF+ GSA LA   P D  A+RCI ELL  LDTY+PDP R  DRP LM +ENVF+I GRG+VVTGKIE+G +R GD V+IVGL ++ R  VVT VE+F  ++D G AGDNVGCLLR     EV RGQVLAA G++TP+  FEAEVYVL KEEGGRHTPFFDGYTPQFFFRT +VTGTA V G  D+AMPGDGV L + L +PIAL +G  FAIREG +TVGSGVVT+V+A
Sbjct:  138 NKCDLVDDPELIELVEMDLRELLTKYGFPGDEVPFVRGSAMLAHDNPTDSQATRCIDELLAALDTYIPDPVRAVDRPLLMPIENVFTIEGRGTVVTGKIERGMVRGGDTVDIVGLADEPRKVVVTQVETFGQVLDFGQAGDNVGCLLRGVARDEVQRGQVLAAAGSITPHVRFEAEVYVLTKEEGGRHTPFFDGYTPQFFFRTADVTGTAEVLGGVDMAMPGDGVKLGIRLGRPIALDDGAHFAIREGGRTVGSGVVTKVLA 399          
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A5Q3L2X6_9BACT (Translation elongation factor Tu n=1 Tax=Planctomycetales bacterium 10988 TaxID=2603660 RepID=A0A5Q3L2X6_9BACT)

HSP 1 Score: 359 bits (921), Expect = 8.140e-121
Identity = 181/261 (69.35%), Postives = 209/261 (80.08%), Query Frame = 1
Query:    1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVI 783
            NKCDLVDDPELIELVE+E+RE+L+ YGF G+ VPFI+GSAKLA   P D   +RCI ELLE LD  VPDP RL D+PFLM +E V+SI GRG+VVTGK+EQG IR GDA+EIVGL E +  D+VT VESF  +   G AG++VGCLLRKT  SEV RGQVLAA G++  +  FEAEVYVLKKEEGGRHT F +GYTPQFFFRTT++TGT  V G   LAMPGDGV LNV L+ PIALA+GDRFAIREG KT+GSGVVT+VI
Sbjct:  132 NKCDLVDDPELIELVEMEMRELLSDYGFPGETVPFIHGSAKLAHDHPADEQHARCIVELLEALDRSVPDPVRLIDQPFLMPIEGVYSISGRGTVVTGKVEQGIIRAGDAIEIVGLSEKSHVDIVTQVESFGQVQSEGKAGESVGCLLRKTGKSEVQRGQVLAASGSLNSHSQFEAEVYVLKKEEGGRHTAFSNGYTPQFFFRTTDITGTTTVLGDLGLAMPGDGVKLNVSLHNPIALADGDRFAIREGGKTIGSGVVTKVI 392          
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A5C5X2Q4_9BACT (Elongation factor Tu n=3 Tax=Rhodopirellula TaxID=265488 RepID=A0A5C5X2Q4_9BACT)

HSP 1 Score: 359 bits (921), Expect = 9.590e-121
Identity = 172/262 (65.65%), Postives = 214/262 (81.68%), Query Frame = 1
Query:    1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 786
            NKCDLV+D EL++LVE++LRE+L+ YG+ GDEVP I GSAK A   P +P+   CI +LL+TLD+ +PDP RL D+PFLM +ENV+SI GRG+VVTGKIEQG +R GD +EIVGL  +  +DV+T VESF  +++ G AGDNVG LLRKT ++ +++GQVLA  G+VTP+RNFEAEVYVLKKEEGGRHTPFFDGY PQFFFRTTNVTG+A V     +AMPGDGV L++ L QPIA+++GD FAIREG KTVGSGVVT+V+A
Sbjct:  137 NKCDLVEDAELLDLVEMDLRELLSEYGYPGDEVPLIRGSAKQAHDDPTNPETIACIEQLLDTLDSSIPDPLRLIDKPFLMPIENVYSIAGRGTVVTGKIEQGVVRAGDRIEIVGLSSEIGSDVITQVESFGDMLEAGNAGDNVGVLLRKTTHTAIAKGQVLAKAGSVTPHRNFEAEVYVLKKEEGGRHTPFFDGYAPQFFFRTTNVTGSASVMDGVQMAMPGDGVRLSIALKQPIAISDGDHFAIREGGKTVGSGVVTKVVA 398          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I6AAG1_9PLAN2.740e-18398.47Elongation factor Tu n=9 Tax=Gimesia TaxID=1649453... [more]
A0A518I6C4_9PLAN1.500e-14075.95Elongation factor Tu-B n=2 Tax=Gimesia TaxID=16494... [more]
A0A517W387_9PLAN1.030e-13370.88Elongation factor Tu n=1 Tax=Gimesia aquarii TaxID... [more]
A0A2S8F408_9BACT1.310e-12470.99Elongation factor Tu n=3 Tax=Blastopirellula TaxID... [more]
A0A518GBD4_9BACT1.310e-12470.61Elongation factor Tu-A n=1 Tax=Aureliella helgolan... [more]
A0A2A2WD71_9BACT7.710e-12368.20Elongation factor Tu n=15 Tax=Planctomycetes TaxID... [more]
M5SUT3_9BACT1.060e-12266.79Translation elongation factor Tu n=2 Tax=Rhodopire... [more]
A0A847GMC7_9BACT2.130e-12268.70Elongation factor Tu n=1 Tax=Candidatus Anammoximi... [more]
A0A5Q3L2X6_9BACT8.140e-12169.35Translation elongation factor Tu n=1 Tax=Planctomy... [more]
A0A5C5X2Q4_9BACT9.590e-12165.65Elongation factor Tu n=3 Tax=Rhodopirellula TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79558contigM-pyrifera_M_contig79558:176..964 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score366.7
Seed ortholog evalue9.1e-99
Seed eggNOG ortholog595460.RRSWK_06773
Preferred nametuf
KEGG koko:K02358
Hectar predicted targeting categoryother localisation
EggNOG free text desc.This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
EggNOG OGs2IXC2@203682,COG0050@1,COG0050@2
COG Functional cat.J
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012,ko03029,ko04147
Exons1
Model size789
Cds size789
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816699.0410347-CDS-M-pyrifera_M_contig79558:175..9641622816699.0410347-CDS-M-pyrifera_M_contig79558:175..964Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79558 176..964 -
1692278126.652635-CDS-M-pyrifera_M_contig79558:175..9641692278126.652635-CDS-M-pyrifera_M_contig79558:175..964Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79558 176..964 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79558.18674.1prot_M-pyrifera_M_contig79558.18674.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79558 176..964 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79558.18674.1

>prot_M-pyrifera_M_contig79558.18674.1 ID=prot_M-pyrifera_M_contig79558.18674.1|Name=mRNA_M-pyrifera_M_contig79558.18674.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=263bp
NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDP
DASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIE
QGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKT
NYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFF
FRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSK
TVGSGVVTRVIA*
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mRNA from alignment at M-pyrifera_M_contig79558:176..964-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79558.18674.1 ID=mRNA_M-pyrifera_M_contig79558.18674.1|Name=mRNA_M-pyrifera_M_contig79558.18674.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=789bp|location=Sequence derived from alignment at M-pyrifera_M_contig79558:176..964- (Macrocystis pyrifera P11B4 male)
AACAAGTGTGATCTGGTGGATGATCCGGAGCTGATCGAACTGGTAGAGCT GGAGCTGCGGGAAATGCTGACGCATTATGGCTTTACTGGAGATGAAGTTC CCTTTATCTACGGTTCCGCGAAACTGGCCGATGCACGTCCGGATGATCCG GACGCCTCCCGGTGTATCCACGAACTGCTGGAGACGCTCGACACCTACGT GCCGGATCCGCAGAGGCTGACTGACAGGCCGTTTCTGATGTCGGTCGAAA ACGTGTTCAGCATCATGGGCCGCGGGTCTGTGGTGACGGGTAAGATTGAA CAGGGACAAATCCGTCCCGGCGATGCGGTCGAGATTGTCGGTCTGTGTGA AGATACGCGCACTGATGTTGTGACTTCGGTGGAGTCGTTCAACGCACTGG TCGACACGGGCTATGCCGGCGACAACGTGGGTTGCCTGTTGAGAAAGACG AACTACTCAGAAGTTTCGCGGGGTCAGGTGCTGGCAGCAGTTGGCACCGT GACGCCGTATCGAAACTTCGAGGCGGAAGTTTATGTTTTGAAAAAGGAAG AAGGGGGACGGCATACGCCTTTTTTTGATGGCTATACGCCCCAGTTTTTC TTTCGTACGACGAACGTCACGGGAACCGCACGGGTGGAAGGCCAGGCAGA TCTGGCCATGCCCGGTGATGGTGTGACACTGAACGTGATGCTCAACCAGC CGATCGCGCTGGCTGAGGGGGACCGGTTTGCGATACGCGAAGGCAGCAAA ACGGTCGGTTCGGGAGTGGTCACACGCGTGATTGCCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79558:176..964-

>mRNA_M-pyrifera_M_contig79558.18674.1 ID=mRNA_M-pyrifera_M_contig79558.18674.1|Name=mRNA_M-pyrifera_M_contig79558.18674.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1578bp|location=Sequence derived from alignment at M-pyrifera_M_contig79558:176..964- (Macrocystis pyrifera P11B4 male)
AACAAGTGTGATCTGGTGGATGATCCGGAGCTGATCGAACTGGTAGAGCT
GGAGCTGCGGGAAATGCTGACGCATTATGGCTTTACTGGAGATGAAGTTC
CCTTTATCTACGGTTCCGCGAAACTGGCCGATGCACGTCCGGATGATCCG
GACGCCTCCCGGTGTATCCACGAACTGCTGGAGACGCTCGACACCTACGT
GCCGGATCCGCAGAGGCTGACTGACAGGCCGTTTCTGATGTCGGTCGAAA
ACGTGTTCAGCATCATGGGCCGCGGGTCTGTGGTGACGGGTAAGATTGAA
CAGGGACAAATCCGTCCCGGCGATGCGGTCGAGATTGTCGGTCTGTGTGA
AGATACGCGCACTGATGTTGTGACTTCGGTGGAGTCGTTCAACGCACTGG
TCGACACGGGCTATGCCGGCGACAACGTGGGTTGCCTGTTGAGAAAGACG
AACTACTCAGAAGTTTCGCGGGGTCAGGTGCTGGCAGCAGTTGGCACCGT
GACGCCGTATCGAAACTTCGAGGCGGAAGTTTATGTTTTGAAAAAGGAAG
AAGGGGGACGGCATACGCCTTTTTTTGATGGCTATACGCCCCAGTTTTTC
TTTCGTACGACGAACGTCACGGGAACCGCACGGGTGGAAGGCCAGGCAGA
TCTGGCCATGCCCGGTGATGGTGTGACACTGAACGTGATGCTCAACCAGC
CGATCGCGCTGGCTGAGGGGGACCGGTTTGCGATACGCGAAGGCAGCAAA
ACGGTCGGTTCGGGAGTGGTCACACGCGTGATTGCCTGAAACAAGTGTGA
TCTGGTGGATGATCCGGAGCTGATCGAACTGGTAGAGCTGGAGCTGCGGG
AAATGCTGACGCATTATGGCTTTACTGGAGATGAAGTTCCCTTTATCTAC
GGTTCCGCGAAACTGGCCGATGCACGTCCGGATGATCCGGACGCCTCCCG
GTGTATCCACGAACTGCTGGAGACGCTCGACACCTACGTGCCGGATCCGC
AGAGGCTGACTGACAGGCCGTTTCTGATGTCGGTCGAAAACGTGTTCAGC
ATCATGGGCCGCGGGTCTGTGGTGACGGGTAAGATTGAACAGGGACAAAT
CCGTCCCGGCGATGCGGTCGAGATTGTCGGTCTGTGTGAAGATACGCGCA
CTGATGTTGTGACTTCGGTGGAGTCGTTCAACGCACTGGTCGACACGGGC
TATGCCGGCGACAACGTGGGTTGCCTGTTGAGAAAGACGAACTACTCAGA
AGTTTCGCGGGGTCAGGTGCTGGCAGCAGTTGGCACCGTGACGCCGTATC
GAAACTTCGAGGCGGAAGTTTATGTTTTGAAAAAGGAAGAAGGGGGACGG
CATACGCCTTTTTTTGATGGCTATACGCCCCAGTTTTTCTTTCGTACGAC
GAACGTCACGGGAACCGCACGGGTGGAAGGCCAGGCAGATCTGGCCATGC
CCGGTGATGGTGTGACACTGAACGTGATGCTCAACCAGCCGATCGCGCTG
GCTGAGGGGGACCGGTTTGCGATACGCGAAGGCAGCAAAACGGTCGGTTC
GGGAGTGGTCACACGCGTGATTGCCTGA
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