mRNA_M-pyrifera_M_contig79558.18674.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A6I6AAG1_9PLAN (Elongation factor Tu n=9 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AAG1_9PLAN) HSP 1 Score: 517 bits (1332), Expect = 2.740e-183 Identity = 258/262 (98.47%), Postives = 261/262 (99.62%), Query Frame = 1
Query: 1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 786
NKCDLVDDPELIELVELELREMLTHYGF GDEVPFIYGSAKLADARPDDP+ASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCE+TRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNY+EVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA
Sbjct: 132 NKCDLVDDPELIELVELELREMLTHYGFAGDEVPFIYGSAKLADARPDDPEASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEETRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYAEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 393
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A518I6C4_9PLAN (Elongation factor Tu-B n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I6C4_9PLAN) HSP 1 Score: 409 bits (1051), Expect = 1.500e-140 Identity = 199/262 (75.95%), Postives = 228/262 (87.02%), Query Frame = 1
Query: 1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 786
NKCDLVDDP+LIELVE+E+R+MLT YGF GD+VPFI GSAK A P D A+RCIH+LL LD +PDP R+TD+PFLMS+ENVFSI GRG+VVTGKIEQG+IR G++VEI+GL ++TR D VT VESF+ALV+TG AGDNVGCLLRKT Y EVSRGQVLA G+VTPYR+FEAEVYVLKKEEGGRHTPFF+GYTPQFFFRTTNVTGTA V G D+A+PGDGVTL+V L P+ALAEGDRFA+REG KTVGSGVVT+VIA
Sbjct: 132 NKCDLVDDPDLIELVEMEIRDMLTQYGFPGDDVPFIRGSAKQAHDHPADEGAARCIHQLLNALDRSIPDPVRMTDKPFLMSIENVFSISGRGTVVTGKIEQGEIRAGESVEILGLSDETRVDTVTQVESFSALVETGRAGDNVGCLLRKTGYDEVSRGQVLAVAGSVTPYRDFEAEVYVLKKEEGGRHTPFFNGYTPQFFFRTTNVTGTAMVLGDVDMALPGDGVTLSVSLTHPVALAEGDRFAVREGGKTVGSGVVTKVIA 393
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A517W387_9PLAN (Elongation factor Tu n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W387_9PLAN) HSP 1 Score: 392 bits (1006), Expect = 1.030e-133 Identity = 185/261 (70.88%), Postives = 223/261 (85.44%), Query Frame = 1
Query: 1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVI 783
NKCDLVDDPELIELVE+ELRE+L+ YGF GDE+PFI GSAKLA P D +AS+CI++LL LDTY+PDP R+ D+PFLM +ENVF I GRG+VVTG+IE+G IR GD+VEI+GL R D+VT VESF+ +++TGYAG+NVGCLLRKT Y EVSRGQVLAA G++T ++NFEAEVYVLKKEEGGRHTPFF+GYTPQFFFRTT+VTGTA V G D+A+PGDGV L++ L P+AL +GDRFA+REG KTVGSGV+T+VI
Sbjct: 132 NKCDLVDDPELIELVEMELRELLSRYGFPGDEIPFIRGSAKLAHDNPADKEASKCINQLLSALDTYIPDPDRMIDKPFLMPIENVFMIEGRGTVVTGRIEKGMIRTGDSVEIIGLTNQARVDIVTQVESFSEVLETGYAGNNVGCLLRKTRYDEVSRGQVLAATGSITSHQNFEAEVYVLKKEEGGRHTPFFNGYTPQFFFRTTDVTGTATVLGNVDMALPGDGVKLSISLKHPVALMDGDRFAVREGGKTVGSGVITKVI 392
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A2S8F408_9BACT (Elongation factor Tu n=3 Tax=Blastopirellula TaxID=265487 RepID=A0A2S8F408_9BACT) HSP 1 Score: 369 bits (946), Expect = 1.310e-124 Identity = 186/262 (70.99%), Postives = 213/262 (81.30%), Query Frame = 1
Query: 1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 786
NKCDLV+D EL+ LVELE+RE+LTHYGF GD VP I GSAKLA P DP ASRCI+ELL LDT +PDP R D+PFLM +ENVFSI GRG+VVTGKIEQG +R GDA+EIVGL + T +DVVT VESF ++++G AG NVGCLLRKT + +V +GQVLAA G+VT R FEAEVYVLKKEEGGRHTPFFDGYTPQFFFRT NVTG V G A +A+PGDGV L V L QPIA+++GDRFAIREG KTVGSGVVT+V A
Sbjct: 132 NKCDLVEDAELLTLVELEVRELLTHYGFPGDTVPVIRGSAKLAHDAPSDPAASRCINELLHALDTAIPDPVRQVDKPFLMPIENVFSIAGRGTVVTGKIEQGTVRSGDAIEIVGLTDQTVSDVVTQVESFAEVLESGEAGANVGCLLRKTRHDQVHKGQVLAARGSVTLRRQFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTANVTGKTHVVGDAAMALPGDGVQLQVDLLQPIAVSQGDRFAIREGGKTVGSGVVTKVTA 393
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A518GBD4_9BACT (Elongation factor Tu-A n=1 Tax=Aureliella helgolandensis TaxID=2527968 RepID=A0A518GBD4_9BACT) HSP 1 Score: 369 bits (946), Expect = 1.310e-124 Identity = 185/262 (70.61%), Postives = 212/262 (80.92%), Query Frame = 1
Query: 1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 786
NKCDLV+DPEL+ELVEL+LREMLT YG+ G EVP I GSAKLA P D D+ CI+ELL+ LDT + DP R D+PFLM +ENVFSI GRG+VVTGKIEQG +R GDA+EI+GL + T +DVVT VESF ++++G AGDNVGCLLRKT + EV +GQVLAA G+VTP R FEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTG V G +AMPGDGV L V L QPIAL+ GD FAIREG KTVGSGVVT++ A
Sbjct: 132 NKCDLVEDPELLELVELDLREMLTQYGYAGAEVPVIRGSAKLAHDNPTDADSIACINELLQALDTTIADPVRQIDKPFLMPIENVFSIAGRGTVVTGKIEQGIVRSGDAIEIIGLTDQTVSDVVTQVESFAEILESGRAGDNVGCLLRKTAHDEVHKGQVLAARGSVTPRRQFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGKTHVIGDVQMAMPGDGVQLQVNLLQPIALSTGDHFAIREGGKTVGSGVVTKITA 393
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A2A2WD71_9BACT (Elongation factor Tu n=15 Tax=Planctomycetes TaxID=203682 RepID=A0A2A2WD71_9BACT) HSP 1 Score: 364 bits (935), Expect = 7.710e-123 Identity = 178/261 (68.20%), Postives = 213/261 (81.61%), Query Frame = 1
Query: 1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVI 783
NKCDLV+D EL+ELVEL+LRE+L YG+ G+ P I GSAK A P +P+A CI +LL+ LD ++PDP RL D+PFLM +ENV+SI GRG+VVTGKIEQG +R GD+VEI+GL T TDV+T VESF +++ G AGDNVG LLRKT ++E+++GQVLA VGT+TP+R FEAEVYVLKKEEGGRHTPFFDGY PQFFFRTTNVTG+A V G D+AMPGDGV L V L QPIA+A GDRFAIREG +TVGSGVVTRV+
Sbjct: 139 NKCDLVEDAELLELVELDLRELLNEYGYDGEMTPVIRGSAKQAHDNPTNPEAIECIEQLLDALDRWIPDPVRLIDKPFLMPIENVYSIAGRGTVVTGKIEQGMVRAGDSVEILGLRSATATDVITQVESFGEVLEAGNAGDNVGVLLRKTAHNEITKGQVLARVGTLTPHREFEAEVYVLKKEEGGRHTPFFDGYAPQFFFRTTNVTGSANVLGGVDMAMPGDGVQLKVTLKQPIAVAGGDRFAIREGGRTVGSGVVTRVV 399
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: M5SUT3_9BACT (Translation elongation factor Tu n=2 Tax=Rhodopirellula TaxID=265488 RepID=M5SUT3_9BACT) HSP 1 Score: 364 bits (934), Expect = 1.060e-122 Identity = 175/262 (66.79%), Postives = 213/262 (81.30%), Query Frame = 1
Query: 1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 786
NKCDLV+D EL++LVE++LREML+ YG+ GDEVP I GSAK A P+DPDA+ CI LL+ LD +PDP RL DRPFL+ +ENV+SI GRG+VVTGKIEQG +R GDA+EI+GL +T +DV+T VESF ++ G AGDNVGCLLRKT ++ +++GQVLA G+VTP+R FEAEVYVLKKEEGGRH PFFDGY PQFFFRTTNVTG+A V +AMPGDGV L+V L QP+A+ +GD FAIREG KTVGSGVVTRV++
Sbjct: 138 NKCDLVEDSELLDLVEMDLREMLSEYGYPGDEVPVIRGSAKRAHDDPNDPDATACIERLLDALDRSIPDPVRLVDRPFLLPIENVYSIAGRGTVVTGKIEQGIVRAGDAIEIIGLSSETGSDVITQVESFGDVLQAGKAGDNVGCLLRKTAHTAITKGQVLAKAGSVTPHREFEAEVYVLKKEEGGRHMPFFDGYAPQFFFRTTNVTGSASVMDGVQMAMPGDGVRLSVALKQPVAITDGDHFAIREGGKTVGSGVVTRVVS 399
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A847GMC7_9BACT (Elongation factor Tu n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GMC7_9BACT) HSP 1 Score: 363 bits (932), Expect = 2.130e-122 Identity = 180/262 (68.70%), Postives = 208/262 (79.39%), Query Frame = 1
Query: 1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 786
NKCDLVDDPELIELVE++LRE+LT YGF GDEVPF+ GSA LA P D A+RCI ELL LDTY+PDP R DRP LM +ENVF+I GRG+VVTGKIE+G +R GD V+IVGL ++ R VVT VE+F ++D G AGDNVGCLLR EV RGQVLAA G++TP+ FEAEVYVL KEEGGRHTPFFDGYTPQFFFRT +VTGTA V G D+AMPGDGV L + L +PIAL +G FAIREG +TVGSGVVT+V+A
Sbjct: 138 NKCDLVDDPELIELVEMDLRELLTKYGFPGDEVPFVRGSAMLAHDNPTDSQATRCIDELLAALDTYIPDPVRAVDRPLLMPIENVFTIEGRGTVVTGKIERGMVRGGDTVDIVGLADEPRKVVVTQVETFGQVLDFGQAGDNVGCLLRGVARDEVQRGQVLAAAGSITPHVRFEAEVYVLTKEEGGRHTPFFDGYTPQFFFRTADVTGTAEVLGGVDMAMPGDGVKLGIRLGRPIALDDGAHFAIREGGRTVGSGVVTKVLA 399
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A5Q3L2X6_9BACT (Translation elongation factor Tu n=1 Tax=Planctomycetales bacterium 10988 TaxID=2603660 RepID=A0A5Q3L2X6_9BACT) HSP 1 Score: 359 bits (921), Expect = 8.140e-121 Identity = 181/261 (69.35%), Postives = 209/261 (80.08%), Query Frame = 1
Query: 1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVI 783
NKCDLVDDPELIELVE+E+RE+L+ YGF G+ VPFI+GSAKLA P D +RCI ELLE LD VPDP RL D+PFLM +E V+SI GRG+VVTGK+EQG IR GDA+EIVGL E + D+VT VESF + G AG++VGCLLRKT SEV RGQVLAA G++ + FEAEVYVLKKEEGGRHT F +GYTPQFFFRTT++TGT V G LAMPGDGV LNV L+ PIALA+GDRFAIREG KT+GSGVVT+VI
Sbjct: 132 NKCDLVDDPELIELVEMEMRELLSDYGFPGETVPFIHGSAKLAHDHPADEQHARCIVELLEALDRSVPDPVRLIDQPFLMPIEGVYSISGRGTVVTGKVEQGIIRAGDAIEIVGLSEKSHVDIVTQVESFGQVQSEGKAGESVGCLLRKTGKSEVQRGQVLAASGSLNSHSQFEAEVYVLKKEEGGRHTAFSNGYTPQFFFRTTDITGTTTVLGDLGLAMPGDGVKLNVSLHNPIALADGDRFAIREGGKTIGSGVVTKVI 392
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Match: A0A5C5X2Q4_9BACT (Elongation factor Tu n=3 Tax=Rhodopirellula TaxID=265488 RepID=A0A5C5X2Q4_9BACT) HSP 1 Score: 359 bits (921), Expect = 9.590e-121 Identity = 172/262 (65.65%), Postives = 214/262 (81.68%), Query Frame = 1
Query: 1 NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPDASRCIHELLETLDTYVPDPQRLTDRPFLMSVENVFSIMGRGSVVTGKIEQGQIRPGDAVEIVGLCEDTRTDVVTSVESFNALVDTGYAGDNVGCLLRKTNYSEVSRGQVLAAVGTVTPYRNFEAEVYVLKKEEGGRHTPFFDGYTPQFFFRTTNVTGTARVEGQADLAMPGDGVTLNVMLNQPIALAEGDRFAIREGSKTVGSGVVTRVIA 786
NKCDLV+D EL++LVE++LRE+L+ YG+ GDEVP I GSAK A P +P+ CI +LL+TLD+ +PDP RL D+PFLM +ENV+SI GRG+VVTGKIEQG +R GD +EIVGL + +DV+T VESF +++ G AGDNVG LLRKT ++ +++GQVLA G+VTP+RNFEAEVYVLKKEEGGRHTPFFDGY PQFFFRTTNVTG+A V +AMPGDGV L++ L QPIA+++GD FAIREG KTVGSGVVT+V+A
Sbjct: 137 NKCDLVEDAELLDLVEMDLRELLSEYGYPGDEVPLIRGSAKQAHDDPTNPETIACIEQLLDTLDSSIPDPLRLIDKPFLMPIENVYSIAGRGTVVTGKIEQGVVRAGDRIEIVGLSSEIGSDVITQVESFGDMLEAGNAGDNVGVLLRKTTHTAIAKGQVLAKAGSVTPHRNFEAEVYVLKKEEGGRHTPFFDGYAPQFFFRTTNVTGSASVMDGVQMAMPGDGVRLSIALKQPIAISDGDHFAIREGGKTVGSGVVTKVVA 398 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79558.18674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79558.18674.1 >prot_M-pyrifera_M_contig79558.18674.1 ID=prot_M-pyrifera_M_contig79558.18674.1|Name=mRNA_M-pyrifera_M_contig79558.18674.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=263bp NKCDLVDDPELIELVELELREMLTHYGFTGDEVPFIYGSAKLADARPDDPback to top mRNA from alignment at M-pyrifera_M_contig79558:176..964- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79558.18674.1 ID=mRNA_M-pyrifera_M_contig79558.18674.1|Name=mRNA_M-pyrifera_M_contig79558.18674.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=789bp|location=Sequence derived from alignment at M-pyrifera_M_contig79558:176..964- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79558:176..964- >mRNA_M-pyrifera_M_contig79558.18674.1 ID=mRNA_M-pyrifera_M_contig79558.18674.1|Name=mRNA_M-pyrifera_M_contig79558.18674.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1578bp|location=Sequence derived from alignment at M-pyrifera_M_contig79558:176..964- (Macrocystis pyrifera P11B4 male)back to top |