mRNA_M-pyrifera_M_contig79450.18653.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79450.18653.1
Unique NamemRNA_M-pyrifera_M_contig79450.18653.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig79450.18653.1 vs. uniprot
Match: A0A2E7KFD3_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KFD3_9PLAN)

HSP 1 Score: 468 bits (1204), Expect = 8.610e-167
Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 1
Query:    1 CLSVGCGENTNTKVPPQATVEQAQPEKQVASPLSQEAQNQIDWMVRSGFYDYSDLFRTLCLEVFPDEEMDIKLVKQACDQRIQSWQREQKNWPAVTDCDRLDKAFEKLEEQGIISIQFAGNTQSDGYEIFEDTLHIHDHPASVIGYCFFHKQDLERVMDGKDLILSFGPVNPEDEKSRGPEIGKIIQQELEQAGLKVKWDGTFNERIRVTDMVWQKRNPACKPIDFDI 684
            CL VGCGENTNTKVPPQATVEQAQPEKQVASPLSQEAQNQIDWMVRSGFYDYSDLFRTLCLEVFP+EEMDIKLVKQACDQRIQSWQREQKNWPAVTDCDRLDKAFEKLEEQGIISIQFAGNTQSDGYEIFEDTLHIHDHPASVIGYCFFHKQDLERVMDGKDLILSFGPVNPEDEKSRGPEIGKIIQQELEQAGLKVKWDGTFNERIRVTDM WQKRNPACKPIDFDI
Sbjct:   13 CLPVGCGENTNTKVPPQATVEQAQPEKQVASPLSQEAQNQIDWMVRSGFYDYSDLFRTLCLEVFPEEEMDIKLVKQACDQRIQSWQREQKNWPAVTDCDRLDKAFEKLEEQGIISIQFAGNTQSDGYEIFEDTLHIHDHPASVIGYCFFHKQDLERVMDGKDLILSFGPVNPEDEKSRGPEIGKIIQQELEQAGLKVKWDGTFNERIRVTDMAWQKRNPACKPIDFDI 240          
BLAST of mRNA_M-pyrifera_M_contig79450.18653.1 vs. uniprot
Match: UPI001D15AB4D (hypothetical protein n=2 Tax=Gimesia TaxID=1649453 RepID=UPI001D15AB4D)

HSP 1 Score: 322 bits (824), Expect = 8.530e-109
Identity = 154/233 (66.09%), Postives = 183/233 (78.54%), Query Frame = 1
Query:    1 CLSVGCGENTNTKVPPQATVEQAQP---EKQVASPLSQEAQN---QIDWMVRSGFYDYSDLFRTLCLEVFPDEEMDIKLVKQACDQRIQSWQREQKNWPAVTDCDRLDKAFEKLEEQGIISIQFAGNTQSDGYEIFEDTLHIHDHPASVIGYCFFHKQDLERVMDGKDLILSFGPVNPEDEKSRGPEIGKIIQQELEQAGLKVKWDGTFNERIRVTDMVWQKRNPACKPIDFD 681
            CL +GCGEN NTKVPPQATVE  QP   E     P + + Q+   +IDW+VR+GFYD +DL R +C E++ D  +D   V  A D+RI++W + QK WP VTDCD+LD+ F KL E+GII++Q AGNTQSDGYEIFEDTL  H  P SVIGYCF+H QDLERV+DG DL L+FGPV  EDE+SRGPEIGKII+QELEQAGLKVKWDGTFNERIRVTD+VWQKRNPAC+ +DFD
Sbjct:   14 CLPIGCGENANTKVPPQATVEPTQPVPAEPSAHEPSALQDQSVLGEIDWLVRAGFYDKADLMRIICDEIYYDSNLDADQVSAAIDKRIKAWMQTQKTWPKVTDCDKLDQVFAKLNERGIIALQNAGNTQSDGYEIFEDTLKEHPQPTSVIGYCFYHNQDLERVVDGDDLYLAFGPVKAEDEESRGPEIGKIIRQELEQAGLKVKWDGTFNERIRVTDIVWQKRNPACRSVDFD 246          
BLAST of mRNA_M-pyrifera_M_contig79450.18653.1 vs. uniprot
Match: A0A6I6AKG2_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AKG2_9PLAN)

HSP 1 Score: 288 bits (737), Expect = 2.630e-96
Identity = 131/188 (69.68%), Postives = 156/188 (82.98%), Query Frame = 1
Query:  118 QIDWMVRSGFYDYSDLFRTLCLEVFPDEEMDIKLVKQACDQRIQSWQREQKNWPAVTDCDRLDKAFEKLEEQGIISIQFAGNTQSDGYEIFEDTLHIHDHPASVIGYCFFHKQDLERVMDGKDLILSFGPVNPEDEKSRGPEIGKIIQQELEQAGLKVKWDGTFNERIRVTDMVWQKRNPACKPIDFD 681
            +IDW+VR+GFYD +DL R +C E++ D  +D   V  A D+RI++W + QK WP VTDCD+LD+ F KL E+GII++Q AGNTQSDGYEIFEDTL  H  P SVIGYCF+H QDLERV+DG DL L+FGPV  EDE+SRGPEIGKII+QELEQAGLKVKWDGTFNERIRVTD+VWQKRNPAC+ +DFD
Sbjct:    9 EIDWLVRAGFYDKADLMRIICDEIYYDSNLDADQVSAAIDKRIKAWMQTQKTWPKVTDCDKLDQVFAKLNERGIIALQNAGNTQSDGYEIFEDTLKEHPQPTSVIGYCFYHNQDLERVVDGDDLYLAFGPVKAEDEESRGPEIGKIIRQELEQAGLKVKWDGTFNERIRVTDIVWQKRNPACRSVDFD 196          
BLAST of mRNA_M-pyrifera_M_contig79450.18653.1 vs. uniprot
Match: A0A518FYM8_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FYM8_9PLAN)

HSP 1 Score: 286 bits (731), Expect = 8.140e-95
Identity = 137/223 (61.43%), Postives = 169/223 (75.78%), Query Frame = 1
Query:    1 CLSVGCGENTNTKVPPQATVEQAQPEKQVA------SPLSQEAQNQIDWMVRSGFYDYSDLFRTLCLEVFPDEEMDIKLVKQACDQRIQSWQREQKNWPAVTDCDRLDKAFEKLEEQGIISIQFAGNTQSDGYEIFEDTLHIHDHPASVIGYCFFHKQDLERVMDGKDLILSFGPVNPEDEKSRGPEIGKIIQQELEQAGLKVKWDGTFNERIRVTDMVWQKR 651
            CL +GCGENTNT+ PPQA VE AQP + V       +PL QE  ++IDW VR+GFYD SDL R +C E++ +  +D + V  A D+RI SW+  QK WP VTDCD+LD+ F KL E+GII++Q AG TQSDGYEIF +TL  H  PA++IGYCF+H QDLE V+DG+DL L+FGPV   DE++RGPEIGKIIQQELE+AG +VKWDGTF ERIRV D+ WQKR
Sbjct:   14 CLFLGCGENTNTEAPPQAAVEPAQPVQAVPPAPKTPAPLDQEVHDEIDWRVRAGFYDKSDLMRIICDEIYYESNLDTEQVSAAIDERISSWKDAQKTWPKVTDCDKLDQVFAKLNERGIIALQNAGITQSDGYEIFAETLKEHPQPATIIGYCFYHNQDLEGVVDGRDLYLAFGPVKAGDEETRGPEIGKIIQQELERAGFQVKWDGTFKERIRVQDITWQKR 236          
BLAST of mRNA_M-pyrifera_M_contig79450.18653.1 vs. uniprot
Match: A0A517VMQ7_9PLAN (Uncharacterized protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VMQ7_9PLAN)

HSP 1 Score: 229 bits (583), Expect = 2.550e-72
Identity = 105/186 (56.45%), Postives = 143/186 (76.88%), Query Frame = 1
Query:   97 LSQEAQNQIDWMVRSGFYDYSDLFRTLCLEVFPDEEMDIKLVKQACDQRIQSWQREQKNWPAVTDCDRLDKAFEKLEEQGIISIQFAGNTQSDGYEIFEDTLHIHDHPASVIGYCFFHKQDLERVMDGKDLILSFGPVNPEDEKSRGPEIGKIIQQELEQAGLKVKWDGTFNERIRVTDMVWQKRN 654
            L  EA  ++DW+VRSGFYD +DL R  C E+    ++D   V  A D R+ + + EQKNWPAVTDCDRLD+AF  ++++G+I+++ AGNTQ+DGY+IF+  L  H HP +VIGYCF+H QDLER +DG  L L+FGPV+P+DEK++G EIG II++ELEQ GL+V+W GTFN+++RV  MVWQKR+
Sbjct:   51 LDAEALTEMDWLVRSGFYDKTDLMRVFCEEMDAPGDLDETQVAAAIDARLAAHRAEQKNWPAVTDCDRLDQAFAGMKKRGLITLENAGNTQTDGYDIFQVYLAEHPHPETVIGYCFYHNQDLERAVDGLPLYLAFGPVDPKDEKTKGAEIGNIIREELEQGGLEVEWQGTFNDQLRVPGMVWQKRS 236          
BLAST of mRNA_M-pyrifera_M_contig79450.18653.1 vs. uniprot
Match: A0A517VP57_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VP57_9PLAN)

HSP 1 Score: 227 bits (578), Expect = 7.170e-72
Identity = 101/185 (54.59%), Postives = 138/185 (74.59%), Query Frame = 1
Query:   97 LSQEAQNQIDWMVRSGFYDYSDLFRTLCLEVFPDEEMDIKLVKQACDQRIQSWQREQKNWPAVTDCDRLDKAFEKLEEQGIISIQFAGNTQSDGYEIFEDTLHIHDHPASVIGYCFFHKQDLERVMDGKDLILSFGPVNPEDEKSRGPEIGKIIQQELEQAGLKVKWDGTFNERIRVTDMVWQKR 651
            L  E   ++ W VRSGFYD  DL R  C E++   ++D  LV  A D  +  W+ E+K+WP VTDCDRLD AF  L ++GIIS+Q AGNTQ+DG+EIF+  L  H  PA+V+GYCF+HKQDLERV+ G DL LSFGP++P++EK++G ++G+++ +ELE+ G KV+WDGTFNER++V  +VWQKR
Sbjct:   32 LDSEVIEEMSWYVRSGFYDKQDLTRIFCEEMYAPGDLDEALVSTAIDSELAKWEEEKKSWPTVTDCDRLDSAFTALNKRGIISLQNAGNTQTDGFEIFQVYLEEHPQPATVMGYCFYHKQDLERVVAGHDLYLSFGPIDPKEEKTKGIKVGQVVFEELERVGFKVEWDGTFNERLKVVGLVWQKR 216          
BLAST of mRNA_M-pyrifera_M_contig79450.18653.1 vs. uniprot
Match: A0A518IL17_9PLAN (Uncharacterized protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IL17_9PLAN)

HSP 1 Score: 226 bits (577), Expect = 2.000e-71
Identity = 101/187 (54.01%), Postives = 140/187 (74.87%), Query Frame = 1
Query:   91 SPLSQEAQNQIDWMVRSGFYDYSDLFRTLCLEVFPDEEMDIKLVKQACDQRIQSWQREQKNWPAVTDCDRLDKAFEKLEEQGIISIQFAGNTQSDGYEIFEDTLHIHDHPASVIGYCFFHKQDLERVMDGKDLILSFGPVNPEDEKSRGPEIGKIIQQELEQAGLKVKWDGTFNERIRVTDMVWQKR 651
            S L  E   +IDW+VR+GFYD SDL R +C E++  E++D  LV +  D ++ +W+ ++K WPAVTDCDRLD  F+ L ++GI + Q +GNTQSDGYE F      H  PAS++GYCF+H QDLERV+ G  L L+FGPV+P++E+++G E+G II++EL++AGLKV+WDGTFNER+ V D VWQ+R
Sbjct:   51 SKLDAEILKEIDWLVRAGFYDKSDLMRIICEEIYAQEDIDESLVSKTIDSQLAAWEEQKKTWPAVTDCDRLDSVFDALNKRGINAQQNSGNTQSDGYENFRYDYEEHPAPASIVGYCFYHNQDLERVVGGDGLYLAFGPVDPKEEEAKGMEVGNIIREELQKAGLKVEWDGTFNERLIVRDFVWQRR 237          
BLAST of mRNA_M-pyrifera_M_contig79450.18653.1 vs. uniprot
Match: A0A6M0S4X9_9CYAN (Uncharacterized protein n=1 Tax=Leptolyngbyaceae cyanobacterium CCMR0082 TaxID=2304604 RepID=A0A6M0S4X9_9CYAN)

HSP 1 Score: 191 bits (484), Expect = 4.810e-58
Identity = 90/185 (48.65%), Postives = 126/185 (68.11%), Query Frame = 1
Query:   97 LSQEAQNQIDWMVRSGFYDYSDLFRTLCLEVFPDEEMDIKLVKQACDQRIQSWQREQKNWPAVTDCDRLDKAFEKLEEQGIISIQFAGNTQSDGYEIFEDTLHIHDHPASVIGYCFFHKQDLERVMDGKDLILSFGPVNPEDEKSRGPEIGKIIQQELEQAGLKVKWDGTFNERIRVTDMVWQKR 651
            LS E   +I  +VRSGFY  + L    C E++   +++   V  A D   ++W+ E++ WP VTDCDRLD AF  + E+GII++Q AG TQSDGYE F D    H + +SV+GYCF+H QDLER + G  L  +FGPV+P +E+++GPEIG +I++ELE+ GLKV WDGTF +R+ V  + WQ+R
Sbjct:    2 LSSETVQEIAALVRSGFYRKNRLMDIFCEEMYAPGDLEPDEVSAAIDVEFETWEAEKQTWPEVTDCDRLDSAFAAINERGIIALQNAGYTQSDGYEDFLDAYENHPNKSSVLGYCFYHGQDLERAVYGGGLYFAFGPVDPTEEETKGPEIGNVIREELERVGLKVDWDGTFAKRLGVPKLEWQRR 186          
BLAST of mRNA_M-pyrifera_M_contig79450.18653.1 vs. uniprot
Match: A0A2S8FQ10_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8FQ10_9BACT)

HSP 1 Score: 176 bits (445), Expect = 3.820e-52
Identity = 89/185 (48.11%), Postives = 118/185 (63.78%), Query Frame = 1
Query:   97 LSQEAQNQIDWMVRSGFYDYSDLFRTLCLEVFPDEEMDIKLVKQACDQRIQSWQREQKNWPAVTDCDRLDKAFEKLEEQGIISIQFAGNTQSDGYEIFEDTLHIHDHPASVIGYCFFHKQDLERVMDGKDLILSFGPVNPEDEKSRGPEIGKIIQQELEQAGLKVKWDGTFNERIRVTDMVWQKR 651
            LSQE + +I  MVR GFY +  L      E++   E+D K V  A D +   ++ E+  +P VTDCDRLD AF  + EQGII+IQ AG TQSDGY+   D         S++GYCF+H QDLER + G+ L  +FGP+ P DE++ G E+G I++  LEQAGL V WDGTF +R+ V  +VWQKR
Sbjct:    2 LSQETRTEIAVMVRYGFYGHGQLVEIFTEEMYAPGELDPKEVVVAIDAQFAEYELEKLQYPDVTDCDRLDTAFSLMSEQGIIAIQNAGYTQSDGYDDVRDFYARCRDQDSILGYCFYHGQDLERAVLGQGLYFAFGPIQPADEQTVGVEVGNIVRSSLEQAGLSVNWDGTFEKRLSVPKLVWQKR 186          
BLAST of mRNA_M-pyrifera_M_contig79450.18653.1 vs. uniprot
Match: K0CAE1_ALCDB (Uncharacterized protein n=8 Tax=Alcanivorax TaxID=59753 RepID=K0CAE1_ALCDB)

HSP 1 Score: 174 bits (440), Expect = 2.250e-51
Identity = 84/185 (45.41%), Postives = 120/185 (64.86%), Query Frame = 1
Query:   97 LSQEAQNQIDWMVRSGFYDYSDLFRTLCLEVFPDEEMDIKLVKQACDQRIQSWQREQKNWPAVTDCDRLDKAFEKLEEQGIISIQFAGNTQSDGYEIFEDTLHIHDHPASVIGYCFFHKQDLERVMDGKDLILSFGPVNPEDEKSRGPEIGKIIQQELEQAGLKVKWDGTFNERIRVTDMVWQKR 651
            LS +   +I  +VR GF +  D+   LC E++   E+D + V+QA D      +RE++ WPAVTDCDRL++AF  L ++G+I++  AG TQ DGY   ++    H    SV GYCF+H QDLE V+ G  L L+FGP++P  E++ GP +G +I +EL +AGL V+WDGTF  RI + DM WQ+R
Sbjct:    3 LSVDTLGEIRALVRGGFDERDDIIEILCEEMYEPGELDEQAVEQAVDAAFSELEREKRQWPAVTDCDRLEQAFLALNKRGVIALHNAGYTQDDGYADVQEVFSEHPEQDSVSGYCFYHGQDLECVVSGGGLYLAFGPMDPVHEETEGPVVGTLIVEELTKAGLDVQWDGTFAHRIFIPDMDWQRR 187          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79450.18653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7KFD3_9PLAN8.610e-16798.68Uncharacterized protein n=3 Tax=Gimesia TaxID=1649... [more]
UPI001D15AB4D8.530e-10966.09hypothetical protein n=2 Tax=Gimesia TaxID=1649453... [more]
A0A6I6AKG2_9PLAN2.630e-9669.68Uncharacterized protein n=2 Tax=Gimesia TaxID=1649... [more]
A0A518FYM8_9PLAN8.140e-9561.43Uncharacterized protein n=1 Tax=Gimesia panareensi... [more]
A0A517VMQ7_9PLAN2.550e-7256.45Uncharacterized protein n=1 Tax=Gimesia algae TaxI... [more]
A0A517VP57_9PLAN7.170e-7254.59Uncharacterized protein n=2 Tax=Gimesia aquarii Ta... [more]
A0A518IL17_9PLAN2.000e-7154.01Uncharacterized protein n=1 Tax=Gimesia fumaroli T... [more]
A0A6M0S4X9_9CYAN4.810e-5848.65Uncharacterized protein n=1 Tax=Leptolyngbyaceae c... [more]
A0A2S8FQ10_9BACT3.820e-5248.11Uncharacterized protein n=1 Tax=Blastopirellula ma... [more]
K0CAE1_ALCDB2.250e-5145.41Uncharacterized protein n=8 Tax=Alcanivorax TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79450contigM-pyrifera_M_contig79450:279..965 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score176.4
Seed ortholog evalue1.5e-41
Seed eggNOG ortholog930169.B5T_00365
Hectar predicted targeting categoryother localisation
EggNOG OGs1R3PG@1224,1SQ7B@1236,2DM25@1,31E7N@2
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size687
Cds size687
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816698.0415847-CDS-M-pyrifera_M_contig79450:278..9651622816698.0415847-CDS-M-pyrifera_M_contig79450:278..965Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79450 279..965 -
1692278126.0503206-CDS-M-pyrifera_M_contig79450:278..9651692278126.0503206-CDS-M-pyrifera_M_contig79450:278..965Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79450 279..965 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79450.18653.1prot_M-pyrifera_M_contig79450.18653.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79450 279..965 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79450.18653.1

>prot_M-pyrifera_M_contig79450.18653.1 ID=prot_M-pyrifera_M_contig79450.18653.1|Name=mRNA_M-pyrifera_M_contig79450.18653.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=229bp
CLSVGCGENTNTKVPPQATVEQAQPEKQVASPLSQEAQNQIDWMVRSGFY
DYSDLFRTLCLEVFPDEEMDIKLVKQACDQRIQSWQREQKNWPAVTDCDR
LDKAFEKLEEQGIISIQFAGNTQSDGYEIFEDTLHIHDHPASVIGYCFFH
KQDLERVMDGKDLILSFGPVNPEDEKSRGPEIGKIIQQELEQAGLKVKWD
GTFNERIRVTDMVWQKRNPACKPIDFDI*
back to top

mRNA from alignment at M-pyrifera_M_contig79450:279..965-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79450.18653.1 ID=mRNA_M-pyrifera_M_contig79450.18653.1|Name=mRNA_M-pyrifera_M_contig79450.18653.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=687bp|location=Sequence derived from alignment at M-pyrifera_M_contig79450:279..965- (Macrocystis pyrifera P11B4 male)
TGCCTGTCCGTCGGTTGTGGTGAGAACACCAATACCAAAGTCCCACCGCA AGCGACAGTAGAGCAGGCTCAGCCAGAAAAGCAGGTCGCATCACCACTCA GCCAGGAAGCACAGAATCAAATTGACTGGATGGTCCGTTCCGGCTTTTAT GACTATTCCGATCTGTTTCGAACCCTCTGTCTCGAAGTCTTCCCAGATGA AGAGATGGATATCAAGCTGGTAAAGCAGGCTTGCGATCAACGCATCCAAT CCTGGCAGAGAGAACAGAAAAACTGGCCCGCAGTGACCGACTGCGACCGT CTCGACAAGGCATTTGAAAAGCTGGAAGAGCAAGGGATCATTTCGATCCA GTTCGCCGGGAATACACAGTCAGACGGTTACGAAATTTTTGAAGACACCC TCCACATACACGATCACCCCGCTTCTGTCATCGGGTACTGTTTCTTTCAC AAACAGGATCTGGAACGGGTAATGGACGGCAAAGACCTCATCCTTTCTTT CGGTCCTGTTAACCCCGAGGACGAAAAGTCCAGAGGACCGGAAATCGGAA AAATCATCCAGCAGGAACTGGAGCAGGCTGGTCTGAAGGTCAAATGGGAC GGAACTTTCAACGAACGCATCCGCGTCACTGATATGGTCTGGCAGAAACG CAACCCTGCTTGCAAACCCATTGATTTTGACATCTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig79450:279..965-

>mRNA_M-pyrifera_M_contig79450.18653.1 ID=mRNA_M-pyrifera_M_contig79450.18653.1|Name=mRNA_M-pyrifera_M_contig79450.18653.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1374bp|location=Sequence derived from alignment at M-pyrifera_M_contig79450:279..965- (Macrocystis pyrifera P11B4 male)
TGCCTGTCCGTCGGTTGTGGTGAGAACACCAATACCAAAGTCCCACCGCA
AGCGACAGTAGAGCAGGCTCAGCCAGAAAAGCAGGTCGCATCACCACTCA
GCCAGGAAGCACAGAATCAAATTGACTGGATGGTCCGTTCCGGCTTTTAT
GACTATTCCGATCTGTTTCGAACCCTCTGTCTCGAAGTCTTCCCAGATGA
AGAGATGGATATCAAGCTGGTAAAGCAGGCTTGCGATCAACGCATCCAAT
CCTGGCAGAGAGAACAGAAAAACTGGCCCGCAGTGACCGACTGCGACCGT
CTCGACAAGGCATTTGAAAAGCTGGAAGAGCAAGGGATCATTTCGATCCA
GTTCGCCGGGAATACACAGTCAGACGGTTACGAAATTTTTGAAGACACCC
TCCACATACACGATCACCCCGCTTCTGTCATCGGGTACTGTTTCTTTCAC
AAACAGGATCTGGAACGGGTAATGGACGGCAAAGACCTCATCCTTTCTTT
CGGTCCTGTTAACCCCGAGGACGAAAAGTCCAGAGGACCGGAAATCGGAA
AAATCATCCAGCAGGAACTGGAGCAGGCTGGTCTGAAGGTCAAATGGGAC
GGAACTTTCAACGAACGCATCCGCGTCACTGATATGGTCTGGCAGAAACG
CAACCCTGCTTGCAAACCCATTGATTTTGACATCTGATGCCTGTCCGTCG
GTTGTGGTGAGAACACCAATACCAAAGTCCCACCGCAAGCGACAGTAGAG
CAGGCTCAGCCAGAAAAGCAGGTCGCATCACCACTCAGCCAGGAAGCACA
GAATCAAATTGACTGGATGGTCCGTTCCGGCTTTTATGACTATTCCGATC
TGTTTCGAACCCTCTGTCTCGAAGTCTTCCCAGATGAAGAGATGGATATC
AAGCTGGTAAAGCAGGCTTGCGATCAACGCATCCAATCCTGGCAGAGAGA
ACAGAAAAACTGGCCCGCAGTGACCGACTGCGACCGTCTCGACAAGGCAT
TTGAAAAGCTGGAAGAGCAAGGGATCATTTCGATCCAGTTCGCCGGGAAT
ACACAGTCAGACGGTTACGAAATTTTTGAAGACACCCTCCACATACACGA
TCACCCCGCTTCTGTCATCGGGTACTGTTTCTTTCACAAACAGGATCTGG
AACGGGTAATGGACGGCAAAGACCTCATCCTTTCTTTCGGTCCTGTTAAC
CCCGAGGACGAAAAGTCCAGAGGACCGGAAATCGGAAAAATCATCCAGCA
GGAACTGGAGCAGGCTGGTCTGAAGGTCAAATGGGACGGAACTTTCAACG
AACGCATCCGCGTCACTGATATGGTCTGGCAGAAACGCAACCCTGCTTGC
AAACCCATTGATTTTGACATCTGA
back to top