mRNA_M-pyrifera_M_contig79382.18641.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79382.18641.1
Unique NamemRNA_M-pyrifera_M_contig79382.18641.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig79382.18641.1 vs. uniprot
Match: A0A6A7LRR2_9CHLR (Prolyl oligopeptidase family serine peptidase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6A7LRR2_9CHLR)

HSP 1 Score: 104 bits (260), Expect = 2.780e-21
Identity = 92/295 (31.19%), Postives = 137/295 (46.44%), Query Frame = 1
Query:    4 LMRERKRAXXXXIGEFEVTPTPWVGEGSYGVVFPLHGALYIADDISKEVSELRCIVKS-EDVGGAVLEVKEMRGSAVFVAGAKLWRVDLRSGGGLEEVCSVPEGATSVAVADYLAAEEFDRYSGFWVSKEGGWVCWQVTDESVLSDVPIPIVPVRDSEPLRQDRQSHRFVYAGGTNPRVALCVRGEDDGTVHWLKLGKEDEGEVDWVRGWYLGRVWWIGDV-LVVALVNREQSKLRILRFDAPTFQPHLILEEEDPSWINIVDNLILSSSPSTSASPATLDLIYTSEMSGYRQLY 882
            L RER+R       E  VT   W  + +  ++ P +G L +    S     LR +  S E    A L     R   VFV  ++LW  D+  GG   ++        S  +A+Y+A EE DR SGFWVS +G  V +   D     D+P+  +  +  +  R +   HR+ +AGG N RV L V   D G+  WL LG + +         YL RV W  D  L V + +R+Q +L + R+D+      L   EE  SWIN+ D+L   +  +          +++SE +G+R LY
Sbjct:   85 LRRERQRQR-----ETGVTQYSWA-KAADRLLVPSNGQLSVT---SSRGEPLRSVAPSAEPAIDARLTPDGQR--VVFVRRSELWIADVE-GGPARQLTFDASDTISNGLAEYIAQEEMDRPSGFWVSLDGSLVAYIQVDGG---DIPVYPIVHQGGDAWRVEH--HRYPFAGGGNVRVRLGVVSADGGSTRWLDLGSDTDI--------YLARVDWCPDGRLAVQVQSRDQRRLELWRYDSDGCARTLCHAEESDSWINLHDDLRFLNDGT---------FVWSSERTGFRHLY 345          
BLAST of mRNA_M-pyrifera_M_contig79382.18641.1 vs. uniprot
Match: G7J6W0_MEDTR (Dipeptidyl peptidase IV-like protein n=6 Tax=Trifolieae TaxID=163742 RepID=G7J6W0_MEDTR)

HSP 1 Score: 99.4 bits (246), Expect = 1.950e-19
Identity = 87/298 (29.19%), Postives = 140/298 (46.98%), Query Frame = 1
Query:    4 LMRERKRAXXXXIGEFEVTPTPWVGEGSY--GVVFPLHGALYIADDISKEVSELRCIVKSEDVGGAVLEVKEMRGSAV-FVAGAKLWRVDLRSGGGLEEVCSVPEGATSVAVADYLAAEEFDRYSGFWVSKEGGWVCWQVTDESVLSDVPIPIVPVRDSEPLRQDRQS-HRFVYAGGTNPRVALCVRGEDDGTVHWLKLGKEDEGEVDWVRGWYLGRVWWI-GDVLVVALVNREQSKLRILRFDAPTFQPHLILEEEDPSWINIVDNLILSSSPSTSASPATLDLIYTSEMSGYRQLY 882
            L RER R     +  +E     WV   S    V+ PL   +Y+  DIS   +EL+  + S      +       GS + +V   +L  ++L S    +      E   +  +A+Y+A EE DR +G+W S +  ++ +   D    S++P+  +  +    +  D Q  H + +AG +N ++ L V     G+  W+ L      E+D     YL RV W+ G++L   ++NR Q+K++I++FD  T Q   IL EE+ +WINI D         T  S      I+ SE SG+R LY
Sbjct:  108 LRRERLRERGLGVTRYE-----WVKTNSKRKAVLVPLPAGIYV-HDISHSKTELK--LPSIPASPIIDPHLSPDGSMLAYVRDCELHVMNLLSDESKQLTHGAKENGFTHGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVD---YSEIPLFRIMHQGRSSVGTDAQEDHPYPFAGASNAKIRLGVVSVAGGSTTWMDLVCGGVKELD-NEDEYLARVNWMHGNILTAQIINRHQTKIKIVKFDIRTGQRRDILVEENKTWINIHDCFTPFDKGVTKFSGG---FIWASEKSGFRHLY 390          
BLAST of mRNA_M-pyrifera_M_contig79382.18641.1 vs. uniprot
Match: A0A535MZS9_9CHLR (S9 family peptidase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535MZS9_9CHLR)

HSP 1 Score: 99.0 bits (245), Expect = 2.530e-19
Identity = 83/292 (28.42%), Postives = 125/292 (42.81%), Query Frame = 1
Query:    7 MRERKRAXXXXIGEFEVTPTPWVGEGSYGVVFPLHGALYIADDISKEVSELRCIVKSEDVGGAVLEVKEMRGSAVFVAGAKLWRVDLRSGGGLEEVCSVPEGATSVAVADYLAAEEFDRYSGFWVSKEGGWVCWQVTDESVLSDVPIPIVPVRDSEPLRQDRQSHRFVYAGGTNPRVALCVRGEDDGTVHWLKLGKEDEGEVDWVRGWYLGRVWWIGDV-LVVALVNREQSKLRILRFDAPTFQPHLILEEEDPSWINIVDNLILSSSPSTSASPATLDLIYTSEMSGYRQL 879
            ++ER R       E  +T   W  E    +V P+ G LY       E   LR +       GA+       G  VF    +   V +    G   + S  +       A+Y+A EE DRYSGFWVS++  W+ ++  DE       +P+ P+      R + + HR+ +AG  N R  L V     G V WL LG  ++         YL RV W  D  L +  + R+   L +L FD  T +   ++ E+   WIN+ D+L           P T +  ++SE  G+R+L
Sbjct:   78 LQERLRRERLRRREVGITEYWWAAEAPVMLV-PIEGDLY-----RWEAGSLRRLTS-----GAITPQISRDGRLVFFV--RDGEVRVLDQDGERALTSGAQPGVGNGSAEYVAQEELDRYSGFWVSRDSRWLAFEQVDER-----HVPVYPIVHQGQDRIEIEEHRYPFAGADNVRWRLGVTPVAGGGVRWLDLGDPEDH--------YLARVDWHPDGRLFIQRLRRDWRLLELLAFDPTTGRTSTLVSEQADPWINLHDDLRFD--------PRTGEFTWSSESGGFRRL 335          
BLAST of mRNA_M-pyrifera_M_contig79382.18641.1 vs. uniprot
Match: A0A1S2YD78_CICAR (uncharacterized protein LOC101508879 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2YD78_CICAR)

HSP 1 Score: 98.6 bits (244), Expect = 3.550e-19
Identity = 86/300 (28.67%), Postives = 140/300 (46.67%), Query Frame = 1
Query:    4 LMRERKRAXXXXIGEFEVTPTPWVGEGSY--GVVFPLHGALYIADDISKEVSELRCIVKSEDVGGAVLEVKEMR--GSAV-FVAGAKLWRVDLRSGGGLEEVCSVPEGATSVAVADYLAAEEFDRYSGFWVSKEGGWVCWQVTDESVLSDVPIPIVPVRDSEPLRQDRQS-HRFVYAGGTNPRVALCVRGEDDGTVHWLKLGKEDEGEVDWVRGWYLGRVWWI-GDVLVVALVNREQSKLRILRFDAPTFQPHLILEEEDPSWINIVDNLILSSSPSTSASPATLDLIYTSEMSGYRQLY 882
            L RER R     +  +E     WV   S    V+ PL   +YI D     +S  +  +K   + G+ +    +   GS + +V   +L  ++L S    +      E      +A+Y+A EE DR +G+W S +  ++ +   D    S++P+  +  +    +  D Q  H + +AG +N +V L V     G++ W+ L      ++D     YL RV WI G+ +   ++NR Q++++I++FD  T Q   IL EE+ SWINI D         T  S      I+ SE SG+R LY
Sbjct:  108 LRRERSRERGLGVTRYE-----WVKTNSKRKAVMVPLPAGIYIRD-----ISHSKAELKLPSIPGSPIIDPHLSPDGSMLAYVRDCELHVMNLLSNETKQLTHGAKENGLIHGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVD---YSEIPLFRIMHQGKSSVGTDAQEDHPYPFAGASNVKVRLGVVSVAGGSITWMDLVCGSGNKLDSEEE-YLARVNWIHGNSVTAQILNRHQTRIKIVKFDIRTGQRRDILVEENKSWINIHDCFTPLDKGVTKFSGG---FIWASEKSGFRHLY 390          
BLAST of mRNA_M-pyrifera_M_contig79382.18641.1 vs. uniprot
Match: A0A834T7U9_9FABA (Dipeptidyl aminopeptidase 4 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834T7U9_9FABA)

HSP 1 Score: 97.8 bits (242), Expect = 6.500e-19
Identity = 85/303 (28.05%), Postives = 143/303 (47.19%), Query Frame = 1
Query:    4 LMRERKRAXXXXIGEFEVTPTPWVGEGSY--GVVFPLHGALYIADDISKEVSELRCIVKSEDVGGAVLEVKEMR--GSAV-FVAGAKLWRVDLRSGGGLEEVCSVPEGATSVAVADYLAAEEFDRYSGFWVSKEGGWVCWQVTDESVLSDVPI-PIVPVRDSEPLRQDRQSHRFVYAGGTNPRVALCVRGEDDGTVHWLKL---GKEDEGEVDWVRGWYLGRVWWI-GDVLVVALVNREQSKLRILRFDAPTFQPHLILEEEDPSWINIVDNLILSSSPSTSASPATLDLIYTSEMSGYRQLY 882
            L RER R     +  +E     WV   S    ++ PL   +YI     +E+S  +  +K   V G+ +    +   GS + +V  ++L  ++L S    +      E   +  +A+Y+A EE DR +G+W S +  ++ +   D S   ++P+  I+    S    + ++ H + +AG  N +V L V     G+  W+ L   G + +   +     YL RV W+ G+VL   ++NR Q+K++I++FD  T Q  ++L EE   WINI D         T  S      I+ SE +G+R LY
Sbjct:  117 LRRERLRERGLGVTRYE-----WVNTSSKRKAIMVPLPAGIYI-----QEMSHSKAELKLPSVSGSPIIDPRLSPDGSMIAYVRDSELHVLNLLSNETKQLTHGAKENGLTHGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDSS---EIPLFRIMHQGKSSVGVEAQEDHPYPFAGAPNVKVRLGVVSVAGGSTTWMDLVCGGTDQQNNEEE----YLARVNWMHGNVLTAQVLNRHQTKIKIIKFDIKTGQRKIVLVEEHSIWINIHDCFTPLDKGVTKFSGG---FIWASEKTGFRHLY 399          
BLAST of mRNA_M-pyrifera_M_contig79382.18641.1 vs. uniprot
Match: A0A6D2I4W1_9BRAS (Uncharacterized protein n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2I4W1_9BRAS)

HSP 1 Score: 96.3 bits (238), Expect = 2.120e-18
Identity = 67/198 (33.84%), Postives = 104/198 (52.53%), Query Frame = 1
Query:  307 EGATSVAVADYLAAEEFDRYSGFWVSKEGGWVCWQVTDESVLSDVPI-PIVPVRDSEPLRQDRQSHRFVYAGGTNPRVAL-CVRGEDDGTVHWLKL--GKEDEGEVDWVRGWYLGRVWWI-GDVLVVALVNREQSKLRILRFDAPTFQPHLILEEEDPSWINIVDNLI-LSSSPSTSASPATLDLIYTSEMSGYRQLY 882
            E   +  +A+Y+A EE DR SG+W S +  ++ +   D S++   P+  I+    S    + ++ H + +AG  N  V L  V     G   W+ L  G ++  E +     YLGRV WI G+VL   ++NR QSKL+I+ FD  T Q ++IL EE  +W+++ D    L   PS+S        I+ SE +G+R LY
Sbjct:  182 ESTLTYGLAEYIAQEEMDRRSGYWWSLDSKFIAYTEVDSSLI---PLFRIMHQGKSSVGSEAQEDHAYPFAGALNSSVRLGVVSSSGGGKTTWMNLTCGGKNNTEDE-----YLGRVNWISGNVLTAQVLNRSQSKLKIISFDINTGQGNIILTEESDAWVSLHDCFTPLEKVPSSSRRSG--GFIWASERTGFRHLY 369          
BLAST of mRNA_M-pyrifera_M_contig79382.18641.1 vs. uniprot
Match: A0A1R7T3L2_ARATH (Prolyl oligopeptidase family protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A1R7T3L2_ARATH)

HSP 1 Score: 95.9 bits (237), Expect = 2.470e-18
Identity = 89/301 (29.57%), Postives = 142/301 (47.18%), Query Frame = 1
Query:    4 LMRERKRAXXXXIGEFEVTPTPWVGEGSYG--VVFPLHGALYIADDISKEVSELRCIVKSEDVGGAVLEVKEMRGSAV-FVAGAKLWRVDLRSGGGLEEVCSVPEGAT-SVAVADYLAAEEFDRYSGFWVSKEGGWVCWQVTDESVLSDVPIPIVPVRDSEPLRQDRQS-HRFVYAGGTNPRVAL-CVRGEDDGTVHWLKLGKEDEGEVDWVRGWYLGRVWWI-GDVLVVALVNREQSKLRILRFDAPTFQPHLILEEEDPSWINIVDNLI-LSSSPSTSASPATLDLIYTSEMSGYRQLY 882
            L RER R     +  +E     WV   S    +V PL   +Y+ D  S    EL  IV S      +       G  + +V  ++L  ++L      +++ S   G+T S  +A+Y+A EE DR +G+W S +  ++ +   D S    +P+  +  +    +  + Q  H + +AG  N  + L  V     G   W+ L     G  +     YLGRV W+ G+VL+V ++NR QSKL+I+ FD  T Q +++L EE  +W+ + D    L   PS+  S      I+ SE +G+R LY
Sbjct:   82 LRRERLRERGLGVTRYE-----WVKTNSKMRFIVVPLPAGVYMKDLSSSPNPEL--IVPSSPTSPIIDPRLSPNGLFLAYVRESELHVLNLLKNQ-TQQLTSGANGSTLSHGLAEYIAQEEMDRRNGYWWSLDSKFIAYTEVDSS---QIPLFRIMHQGKRSVGSEAQEDHAYPFAGALNSTLRLGVVSSAGGGKTTWMNLVCGGRGNTE---DEYLGRVNWLPGNVLIVQVLNRSQSKLKIISFDINTGQGNVLLTEESDTWVTLHDCFTPLEKVPSSRGSGG---FIWASERTGFRHLY 365          
BLAST of mRNA_M-pyrifera_M_contig79382.18641.1 vs. uniprot
Match: Q9FNF6_ARATH (Dipeptidyl peptidase IV-like protein n=16 Tax=Brassicaceae TaxID=3700 RepID=Q9FNF6_ARATH)

HSP 1 Score: 95.9 bits (237), Expect = 2.860e-18
Identity = 89/301 (29.57%), Postives = 142/301 (47.18%), Query Frame = 1
Query:    4 LMRERKRAXXXXIGEFEVTPTPWVGEGSYG--VVFPLHGALYIADDISKEVSELRCIVKSEDVGGAVLEVKEMRGSAV-FVAGAKLWRVDLRSGGGLEEVCSVPEGAT-SVAVADYLAAEEFDRYSGFWVSKEGGWVCWQVTDESVLSDVPIPIVPVRDSEPLRQDRQS-HRFVYAGGTNPRVAL-CVRGEDDGTVHWLKLGKEDEGEVDWVRGWYLGRVWWI-GDVLVVALVNREQSKLRILRFDAPTFQPHLILEEEDPSWINIVDNLI-LSSSPSTSASPATLDLIYTSEMSGYRQLY 882
            L RER R     +  +E     WV   S    +V PL   +Y+ D  S    EL  IV S      +       G  + +V  ++L  ++L      +++ S   G+T S  +A+Y+A EE DR +G+W S +  ++ +   D S    +P+  +  +    +  + Q  H + +AG  N  + L  V     G   W+ L     G  +     YLGRV W+ G+VL+V ++NR QSKL+I+ FD  T Q +++L EE  +W+ + D    L   PS+  S      I+ SE +G+R LY
Sbjct:   82 LRRERLRERGLGVTRYE-----WVKTNSKMRFIVVPLPAGVYMKDLSSSPNPEL--IVPSSPTSPIIDPRLSPNGLFLAYVRESELHVLNLLKNQ-TQQLTSGANGSTLSHGLAEYIAQEEMDRRNGYWWSLDSKFIAYTEVDSS---QIPLFRIMHQGKRSVGSEAQEDHAYPFAGALNSTLRLGVVSSAGGGKTTWMNLVCGGRGNTE---DEYLGRVNWLPGNVLIVQVLNRSQSKLKIISFDINTGQGNVLLTEESDTWVTLHDCFTPLEKVPSSRGSGG---FIWASERTGFRHLY 365          
BLAST of mRNA_M-pyrifera_M_contig79382.18641.1 vs. uniprot
Match: A0A2P2L8S3_RHIMU (Uncharacterized protein MANES_01G183000 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2L8S3_RHIMU)

HSP 1 Score: 95.1 bits (235), Expect = 5.280e-18
Identity = 64/194 (32.99%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  307 EGATSV-AVADYLAAEEFDRYSGFWVSKEGGWVCWQVTDESVLSDVPIPIVPVRDSEPLRQDRQSHRFVYAGGTNPRVALCVRGEDDGTVHWLKLGKEDEGEVDWVRGWYLGRVWWI-GDVLVVALVNREQSKLRILRFDAPTFQPHLILEEEDPSWINIVDNLILSSSPSTSASPATLDLIYTSEMSGYRQLY 882
            +G T V  +A+Y+A EE DR +G+W S +  ++ +   D S    +P  I+    S    + ++ H + +AG  N +V L V     G + WL L     GE D     YL R  W+ G+VL+V ++ R  S+L+I++FD  T +   IL EE+ +W+N+ D         T  S      I+ SE SG+R LY
Sbjct:  208 QGNTIVHGLAEYIAQEEMDRKNGYWWSLDSKFIAFTQVDSS--GTLPYRIMHQGKSSVSSEAQEDHAYPFAGTANVKVRLGVVSASGGPITWLNLQCGGTGEADSEEE-YLARANWMHGNVLLVQVLERSHSRLKIIKFDIKTGERKDILVEENDTWVNLHDCFTPLDKGVTKYSGG---FIWASEKSGFRHLY 395          
BLAST of mRNA_M-pyrifera_M_contig79382.18641.1 vs. uniprot
Match: A0A168TEP3_9CYAN (Peptidase S9 n=1 Tax=Leptolyngbya valderiana BDU 20041 TaxID=322866 RepID=A0A168TEP3_9CYAN)

HSP 1 Score: 93.6 bits (231), Expect = 1.730e-17
Identity = 89/295 (30.17%), Postives = 126/295 (42.71%), Query Frame = 1
Query:   10 RERKRAXXXXIGEFEVTPTPWVGEGSYGVVFPLHGALYIADDISKEVSELRCIVKSEDVGGAVLEVKEMRGSAVFVAGAKLWRVDLRSGGGLEEVCSVPEGATSVAVADYLAAEEFDRYSGFWVSKEGGWVCWQVTDESVLSDVPIPIVPVRDSEPLRQDRQSHRFVYAGGTNPRVALCVRGEDDGTVHWLKLGKEDEGEVDWVRGWYLGRVWWI--GDVLVVALVNREQSKLRILRFDAPTFQPHLILEEEDPSWINIVDNLILSSSPSTSASPATLDLIYTSEMSGYRQLYRL 888
            RER R     I E  V    W  E    V+ PL G ++  D  S E   L      E       +V        F+    +W   L +G     +    EG  S  VA+++A EE  RY+G+W S EG  +     DES     P+ IVP              R+  AG  N  V L V   + G +  + LG+E +         YL RV W   GD L V   NREQ+ L IL  D  T +  ++L EE P+WIN+ ++     +P         D ++TSE +G+R ++R+
Sbjct:  118 RERAR-----ISETGVVSYDW-DESGEAVLVPLDGDVFYVDVASGEAERLMETESFE----TDFKVSPDGSHVSFIRDQTVWVHALETGQA-RALSPEGEGPVSWGVAEFVAQEEMQRYTGYWWSPEGDRIAVARIDES-----PVEIVPRFGIGAEGVSVTEQRYPRAGTDNALVELYVIELETGALTQVDLGEETDI--------YLSRVNWSESGDRLYVQRQNREQTVLDILAADPATGETEIVLTEEAPTWINLTNDF----TPLEGG-----DFLWTSERTGFRHIHRV 379          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79382.18641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A7LRR2_9CHLR2.780e-2131.19Prolyl oligopeptidase family serine peptidase n=1 ... [more]
G7J6W0_MEDTR1.950e-1929.19Dipeptidyl peptidase IV-like protein n=6 Tax=Trifo... [more]
A0A535MZS9_9CHLR2.530e-1928.42S9 family peptidase n=1 Tax=Chloroflexi bacterium ... [more]
A0A1S2YD78_CICAR3.550e-1928.67uncharacterized protein LOC101508879 n=1 Tax=Cicer... [more]
A0A834T7U9_9FABA6.500e-1928.05Dipeptidyl aminopeptidase 4 n=1 Tax=Senna tora Tax... [more]
A0A6D2I4W1_9BRAS2.120e-1833.84Uncharacterized protein n=5 Tax=Coluteocarpeae Tax... [more]
A0A1R7T3L2_ARATH2.470e-1829.57Prolyl oligopeptidase family protein n=1 Tax=Arabi... [more]
Q9FNF6_ARATH2.860e-1829.57Dipeptidyl peptidase IV-like protein n=16 Tax=Bras... [more]
A0A2P2L8S3_RHIMU5.280e-1832.99Uncharacterized protein MANES_01G183000 n=1 Tax=Rh... [more]
A0A168TEP3_9CYAN1.730e-1730.17Peptidase S9 n=1 Tax=Leptolyngbya valderiana BDU 2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79382contigM-pyrifera_M_contig79382:1..939 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score114.0
Seed ortholog evalue1.3e-22
Seed eggNOG ortholog44056.XP_009032701.1
KEGG koko:K01278
KEGG Pathwayko04974,map04974
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.serine-type peptidase activity
EggNOG OGsCOG1506@1,KOG2281@2759
EC3.4.14.5
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko04090,ko04147
Exons1
Model size939
Cds size933
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816697.3816721-UTR-M-pyrifera_M_contig79382:0..61622816697.3816721-UTR-M-pyrifera_M_contig79382:0..6Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79382 1..6 +
1692278125.6345825-UTR-M-pyrifera_M_contig79382:0..61692278125.6345825-UTR-M-pyrifera_M_contig79382:0..6Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79382 1..6 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816697.3932788-CDS-M-pyrifera_M_contig79382:6..9391622816697.3932788-CDS-M-pyrifera_M_contig79382:6..939Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79382 7..939 +
1692278125.644929-CDS-M-pyrifera_M_contig79382:6..9391692278125.644929-CDS-M-pyrifera_M_contig79382:6..939Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79382 7..939 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79382.18641.1prot_M-pyrifera_M_contig79382.18641.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79382 7..939 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79382.18641.1

>prot_M-pyrifera_M_contig79382.18641.1 ID=prot_M-pyrifera_M_contig79382.18641.1|Name=mRNA_M-pyrifera_M_contig79382.18641.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=311bp
MRERKRARGRGIGEFEVTPTPWVGEGSYGVVFPLHGALYIADDISKEVSE
LRCIVKSEDVGGAVLEVKEMRGSAVFVAGAKLWRVDLRSGGGLEEVCSVP
EGATSVAVADYLAAEEFDRYSGFWVSKEGGWVCWQVTDESVLSDVPIPIV
PVRDSEPLRQDRQSHRFVYAGGTNPRVALCVRGEDDGTVHWLKLGKEDEG
EVDWVRGWYLGRVWWIGDVLVVALVNREQSKLRILRFDAPTFQPHLILEE
EDPSWINIVDNLILSSSPSTSASPATLDLIYTSEMSGYRQLYRLTSSTTP
LSTPSPTPSGH
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mRNA from alignment at M-pyrifera_M_contig79382:1..939+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79382.18641.1 ID=mRNA_M-pyrifera_M_contig79382.18641.1|Name=mRNA_M-pyrifera_M_contig79382.18641.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=939bp|location=Sequence derived from alignment at M-pyrifera_M_contig79382:1..939+ (Macrocystis pyrifera P11B4 male)
GAGCTCATGCGTGAGCGGAAACGGGCACGTGGACGAGGGATTGGGGAGTT TGAGGTCACTCCGACACCTTGGGTTGGCGAAGGGTCATATGGAGTGGTGT TTCCATTGCATGGAGCTTTGTATATTGCGGATGACATTAGCAAGGAGGTG TCAGAGCTGCGCTGCATTGTGAAATCGGAGGACGTTGGTGGCGCCGTGTT GGAAGTGAAGGAGATGCGAGGGTCTGCTGTGTTTGTTGCTGGGGCAAAGT TATGGCGTGTAGATCTTCGTAGTGGAGGTGGTTTGGAAGAGGTATGTAGT GTCCCTGAAGGAGCTACATCGGTGGCAGTAGCAGATTACCTTGCAGCTGA GGAATTTGATCGCTACAGTGGATTTTGGGTGAGTAAGGAAGGTGGATGGG TTTGTTGGCAAGTCACAGATGAGAGTGTCTTGAGTGATGTCCCTATTCCA ATCGTTCCTGTTCGAGATTCTGAGCCACTTCGTCAAGACCGTCAATCACA TCGATTCGTTTACGCTGGAGGAACAAATCCTCGTGTTGCTCTTTGTGTTC GCGGAGAAGATGATGGTACGGTGCATTGGTTGAAGCTTGGGAAAGAAGAT GAAGGTGAGGTGGATTGGGTGAGAGGATGGTATTTGGGTAGAGTGTGGTG GATTGGAGACGTGTTGGTGGTGGCGTTGGTGAATCGAGAACAATCCAAGC TCCGAATTCTGCGTTTTGATGCACCTACGTTTCAACCACACCTCATCCTT GAAGAGGAAGACCCATCCTGGATCAACATTGTTGATAATCTCATCCTCTC CTCTTCCCCTTCCACCTCTGCATCGCCTGCCACTCTGGACCTCATTTATA CCAGCGAGATGAGCGGATATCGTCAACTCTATCGTCTCACTTCCTCCACA ACTCCACTTTCCACCCCATCTCCAACACCTTCGGGCCAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79382:1..939+

>mRNA_M-pyrifera_M_contig79382.18641.1 ID=mRNA_M-pyrifera_M_contig79382.18641.1|Name=mRNA_M-pyrifera_M_contig79382.18641.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1866bp|location=Sequence derived from alignment at M-pyrifera_M_contig79382:1..939+ (Macrocystis pyrifera P11B4 male)
ATGCGTGAGCGGAAACGGGCACGTGGACGAGGGATTGGGGAGTTTGAGGT
CACTCCGACACCTTGGGTTGGCGAAGGGTCATATGGAGTGGTGTTTCCAT
TGCATGGAGCTTTGTATATTGCGGATGACATTAGCAAGGAGGTGTCAGAG
CTGCGCTGCATTGTGAAATCGGAGGACGTTGGTGGCGCCGTGTTGGAAGT
GAAGGAGATGCGAGGGTCTGCTGTGTTTGTTGCTGGGGCAAAGTTATGGC
GTGTAGATCTTCGTAGTGGAGGTGGTTTGGAAGAGGTATGTAGTGTCCCT
GAAGGAGCTACATCGGTGGCAGTAGCAGATTACCTTGCAGCTGAGGAATT
TGATCGCTACAGTGGATTTTGGGTGAGTAAGGAAGGTGGATGGGTTTGTT
GGCAAGTCACAGATGAGAGTGTCTTGAGTGATGTCCCTATTCCAATCGTT
CCTGTTCGAGATTCTGAGCCACTTCGTCAAGACCGTCAATCACATCGATT
CGTTTACGCTGGAGGAACAAATCCTCGTGTTGCTCTTTGTGTTCGCGGAG
AAGATGATGGTACGGTGCATTGGTTGAAGCTTGGGAAAGAAGATGAAGGT
GAGGTGGATTGGGTGAGAGGATGGTATTTGGGTAGAGTGTGGTGGATTGG
AGACGTGTTGGTGGTGGCGTTGGTGAATCGAGAACAATCCAAGCTCCGAA
TTCTGCGTTTTGATGCACCTACGTTTCAACCACACCTCATCCTTGAAGAG
GAAGACCCATCCTGGATCAACATTGTTGATAATCTCATCCTCTCCTCTTC
CCCTTCCACCTCTGCATCGCCTGCCACTCTGGACCTCATTTATACCAGCG
AGATGAGCGGATATCGTCAACTCTATCGTCTCACTTCCTCCACAACTCCA
CTTTCCACCCCATCTCCAACACCTTCGGGCCATATGCGTGAGCGGAAACG
GGCACGTGGACGAGGGATTGGGGAGTTTGAGGTCACTCCGACACCTTGGG
TTGGCGAAGGGTCATATGGAGTGGTGTTTCCATTGCATGGAGCTTTGTAT
ATTGCGGATGACATTAGCAAGGAGGTGTCAGAGCTGCGCTGCATTGTGAA
ATCGGAGGACGTTGGTGGCGCCGTGTTGGAAGTGAAGGAGATGCGAGGGT
CTGCTGTGTTTGTTGCTGGGGCAAAGTTATGGCGTGTAGATCTTCGTAGT
GGAGGTGGTTTGGAAGAGGTATGTAGTGTCCCTGAAGGAGCTACATCGGT
GGCAGTAGCAGATTACCTTGCAGCTGAGGAATTTGATCGCTACAGTGGAT
TTTGGGTGAGTAAGGAAGGTGGATGGGTTTGTTGGCAAGTCACAGATGAG
AGTGTCTTGAGTGATGTCCCTATTCCAATCGTTCCTGTTCGAGATTCTGA
GCCACTTCGTCAAGACCGTCAATCACATCGATTCGTTTACGCTGGAGGAA
CAAATCCTCGTGTTGCTCTTTGTGTTCGCGGAGAAGATGATGGTACGGTG
CATTGGTTGAAGCTTGGGAAAGAAGATGAAGGTGAGGTGGATTGGGTGAG
AGGATGGTATTTGGGTAGAGTGTGGTGGATTGGAGACGTGTTGGTGGTGG
CGTTGGTGAATCGAGAACAATCCAAGCTCCGAATTCTGCGTTTTGATGCA
CCTACGTTTCAACCACACCTCATCCTTGAAGAGGAAGACCCATCCTGGAT
CAACATTGTTGATAATCTCATCCTCTCCTCTTCCCCTTCCACCTCTGCAT
CGCCTGCCACTCTGGACCTCATTTATACCAGCGAGATGAGCGGATATCGT
CAACTCTATCGTCTCACTTCCTCCACAACTCCACTTTCCACCCCATCTCC
AACACCTTCGGGCCAT
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