mRNA_M-pyrifera_M_contig79338.18628.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79338.18628.1
Unique NamemRNA_M-pyrifera_M_contig79338.18628.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig79338.18628.1 vs. uniprot
Match: A0A5A8DAW6_CAFRO (Coronin n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8DAW6_CAFRO)

HSP 1 Score: 258 bits (658), Expect = 1.970e-79
Identity = 130/245 (53.06%), Postives = 167/245 (68.16%), Query Frame = 1
Query:   16 VEKEEAKITLPA-FPQLVSDMRWNQNGSLLGTTCKDKHARVFDVR--TGEVTAEWEPHEGGKIVNSCWITTKGEYLTAGFTRQSHRELKFWDLRKTDEPVHSTRLDQSAGVLMPFFDADTSILYVAGRGDANVRYFEYTDEA--PFIHPIDEYRSAESAKGACMLPKRSVDVSRCEVARILKLTNAKQVMGLSFIVPRKSEMYQEDLYPDCLSAVPAQTADAWFGGATVEPKRMSMDPEKTGGAT 735
            VE    KIT+   F  L+SD+RW+  G LL  +CKDK  RVFD R  + +  +E + HEG K+VN  ++  + + +T GF+R S RE+K WD R   EP+    LDQSAGVLMPF+D D  +LY+ G+GD N+RYFE  DEA    I+P+ E +SAES KG  MLPKR+VDV RCE AR +KL   K  + +SF VPRKS+ +Q+D+YPD L+  P+ TA+ WFGGAT EPKRMSMDP K GGAT
Sbjct:  159 VENCTDKITIEGCFGGLISDIRWSFRGDLLAASCKDKIVRVFDPRVDSSKPISEVQAHEGAKVVNMVFLGHREQLVTTGFSRDSRREIKVWDPRAMTEPILKQELDQSAGVLMPFWDDDAGMLYIGGKGDGNIRYFEIVDEAGATSIYPVSETKSAESTKGLAMLPKRTVDVGRCETARFIKLLRDKAHL-VSFTVPRKSDRFQDDIYPDTLAPEPSTTAEGWFGGATPEPKRMSMDPAKNGGAT 402          
BLAST of mRNA_M-pyrifera_M_contig79338.18628.1 vs. uniprot
Match: A0A7R9YBR7_9STRA (Coronin (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBR7_9STRA)

HSP 1 Score: 248 bits (632), Expect = 3.980e-77
Identity = 120/244 (49.18%), Postives = 154/244 (63.11%), Query Frame = 1
Query:    4 KIWDVEKEEAKITLPAFPQLVSDMRWNQNGSLLGTTCKDKHARVFDVRTGEVTAEWEPHEGGKIVNSCWITTKGEYLTAGFTRQSHRELKFWDLRKTDEPVHSTRLDQSAGVLMPFFDADTSILYVAGRGDANVRYFEYTDEAPFIHPIDEYRSAESAKGACMLPKRSVDVSRCEVARILKLTNAKQVMGLSFIVPRKSEMYQEDLYPDCLSAVPAQTADAWFGGATVEPKRMSMDPEKTGGAT 735
            K+WDVE      T      L+ D+ W+  GS    +CKDK  R+ D RT E TA ++ HEG K     ++  K + +T GFTRQS R+ K WD R T E +    +DQSAGV+MPF+D DT +LY+AG+GD N+RY+E +DE PF + I EYRS +S KG CMLPKR+ DV RCE AR LKLT+   VM LSFIVPRKS+ +QEDLYPD  + VP+  A  W  G+   P   +M P  T  A+
Sbjct:  158 KVWDVEHSSEISTFAECQALIQDIVWDYMGSNYAVSCKDKLIRIVDGRTAECTASFQAHEGAKSCKLTYLGQKDKLVTVGFTRQSQRQFKIWDPRNTSEALKRVDIDQSAGVIMPFYDPDTCLLYLAGKGDGNIRYYEMSDENPFSYSISEYRSTQSQKGMCMLPKRACDVMRCETARFLKLTS-NSVMPLSFIVPRKSDAFQEDLYPDSFAGVPSHAAADWIEGSDKVPIMATMKPGATPSAS 400          
BLAST of mRNA_M-pyrifera_M_contig79338.18628.1 vs. uniprot
Match: A0A812NV59_9DINO (Coronin n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NV59_9DINO)

HSP 1 Score: 245 bits (626), Expect = 8.480e-76
Identity = 118/235 (50.21%), Postives = 158/235 (67.23%), Query Frame = 1
Query:   16 VEKEEAKITLPAFPQLVSDMRWNQNGSLLGTTCKDKHARVFDVRTGEVTAEWEPHEGGKIVNSCWITTKGEYLTAGFTRQSHRELKFWDLRKTDEPVHSTRLDQSAGVLMPFFDADTSILYVAGRGDANVRYFEYTDEAPFIHPIDEYRSAESAKGACMLPKRSVDVSRCEVARILKLTNAKQVMGLSFIVPRKSEMYQEDLYPDCLSAVPAQTADAWFGGATVEPKRMSMDPEK 720
            VEK + K+TL  F   V D+ WN NGSLL TT KDK  RV+D R+ +V A  + H+G K     ++  K + +T GFTRQS RE K WD RK D P+    LDQSAGVL+PF+D   +ILY+ G+GD N+R+FE+ +E+PF++ + E R+  SAKG CM+PKR+VDV+  E+ R LKLT    V G S ++PRK+E Y   +YPD  +AVPAQ+A+ WF G  V+PK  SMDP +
Sbjct:  147 VEKCDDKLTLEDFGGFVQDLNWNYNGSLLATTSKDKLTRVWDPRSSKVVASHKCHDGAKASKVLFLGRKEQLVTVGFTRQSKREFKGWDPRKLDTPLFHKELDQSAGVLLPFYDESNNILYLGGKGDGNMRFFEFVNESPFVYTLGEDRTTTSAKGLCMVPKRTVDVNHSELMRFLKLT-PNTVTGFSVMLPRKAEGYDPSIYPDIPAAVPAQSAEKWFAGTDVDPKLQSMDPSQ 380          
BLAST of mRNA_M-pyrifera_M_contig79338.18628.1 vs. uniprot
Match: A0A7R9VE70_9STRA (Coronin n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VE70_9STRA)

HSP 1 Score: 243 bits (621), Expect = 1.020e-75
Identity = 115/242 (47.52%), Postives = 163/242 (67.36%), Query Frame = 1
Query:    1 VKIWDVEKEEAKITLPAFPQLVSDMRWNQNGSLLGTTCKDKHARVFDVRTGEVTAEWE-PHEGGKIVNSCWITTKGEYLTAGFTRQSHRELKFWDLRKTDEPVHSTRLDQSAGVLMPFFDADTSILYVAGRGDANVRYFEYTDEAPFIHPI-DEYRSAESAKGACMLPKRSVDVSRCEVARILKLTNAKQVMGLSFIVPRKSEMYQEDLYPDCLSAVPAQTADAWFGGATVEPKRMSMDPEK 720
            VK+WDVEK E   +      L+ D+ W+  G +L T+CKDK  R+ D R G V +  E  H+G K V   ++   G+ LTAG +RQS RE+K WDL+    PVHS  +D ++GVL+P +D DT++LY+AG+GD  +R FE+ D+ PF+H + D +RS   AKG CM+PKR ++V  CE AR+LKLTN K +  LSFIVPRKSE +Q+D++PDC S  PA +AD W  G++  P+ MS++P++
Sbjct:  110 VKVWDVEKGEEISSFDDNGGLIQDLEWDFKGDVLATSCKDKIVRIMDPRAGTVASTIENAHDGVKSVKLQFMGESGKLLTAGASRQSAREVKIWDLKNPSAPVHSETIDTASGVLLPLYDDDTNVLYLAGKGDGIIRPFEFEDKKPFLHRLNDGFRSTSPAKGVCMVPKRGLNVMGCETARLLKLTNNKGIHPLSFIVPRKSEAFQDDIFPDCPSTKPAHSADEWAAGSSKPPETMSLNPKE 351          
BLAST of mRNA_M-pyrifera_M_contig79338.18628.1 vs. uniprot
Match: A0A7S1G673_9STRA (Coronin n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G673_9STRA)

HSP 1 Score: 244 bits (623), Expect = 3.550e-75
Identity = 118/236 (50.00%), Postives = 158/236 (66.95%), Query Frame = 1
Query:   13 DVEKEEAKITLP-AFPQLVSDMRWNQNGSLLGTTCKDKHARVFDVRTGEVTAEWEPHEGGKIVNSCWITT-KGEYLTAGFTRQSHRELKFWDLRKTDEPVHSTRLDQSAGVLMPFFDADTSILYVAGRGDANVRYFEYTDEAPFIHPIDEYRSAESAKGACMLPKRSVDVSRCEVARILKLTNAKQVMGLSFIVPRKSEMYQEDLYPDCLSAVPAQTADAWFGGATVEPKRMSMDP 714
            DVEK+E K+T+      LV D++W++ G  +  + KDK  RVFDVR     AEW  HEG K     ++    G+ +T GFT+QS RE++ WDLR T + V    +D ++GV+ PF+D DT +LY+AG+GD N+RY+E  DE PF++ IDEYRS++SAKG  MLPKRSVDV RCEV + LKLT +  V  L F+VPRKSE +Q+DL+PD     P   ADAWF GA  +P + SM+P
Sbjct:  176 DVEKQEDKLTVEYGDGGLVQDLQWDREGKTVLVSSKDKKFRVFDVRANTTVAEWAAHEGAKCSKGVFLEAGSGKVMTVGFTKQSGREMRLWDLRDTSKKVKKVEIDTASGVIFPFYDEDTRMLYLAGKGDGNIRYYEMGDEKPFVYGIDEYRSSQSAKGVFMLPKRSVDVMRCEVVKFLKLTTSA-VEPLHFMVPRKSEAFQDDLFPDHAGFTPGTQADAWFDGADDQPPKTSMNP 410          
BLAST of mRNA_M-pyrifera_M_contig79338.18628.1 vs. uniprot
Match: A0A7S2XRW5_9STRA (Coronin n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRW5_9STRA)

HSP 1 Score: 242 bits (617), Expect = 4.080e-75
Identity = 111/246 (45.12%), Postives = 162/246 (65.85%), Query Frame = 1
Query:    1 VKIWDVEKEEAKITLPAFPQLVSDMRWNQNGSLLGTTCKDKHARVFDVRTGEV-TAEWEPHEGGKIVNSCWITTKGEYLTAGFTRQSHRELKFWDLRKTDEPVHSTRLDQSAGVLMPFFDADTSILYVAGRGDANVRYFEYTDEAPFIHPI-DEYRSAESAKGACMLPKRSVDVSRCEVARILKLTNAKQVMGLSFIVPRKSEMYQEDLYPDCLSAVPAQTADAWFGGATVEPKRMSMDPEKTGGA 732
            VK+WD+E      +      L  D+ W+  G +  T+CKDK  R+ D R G V T   +PH+G K V   ++   G++LT G ++QS RE+K WDL+   EP+H+ ++DQ+AGVL+P +D DT++LY+ G+GD  VR FE+ D+APF+H + D YRS + +KG CM+PKR++++  CE AR+LKLTN+  V  LSF VPRKS+ +Q+D++PDC    PA TA+ W  G++  P  MS+DP   G A
Sbjct:  109 VKVWDIENASEISSFDEMGDLAQDIIWDVRGDICATSCKDKKVRMIDGRAGTVATYIDQPHDGSKSVKIAYMGETGKFLTLGASKQSAREIKVWDLKNLSEPLHTEKIDQAAGVLLPLYDNDTNVLYLCGKGDGQVRPFEFEDKAPFLHKMSDGYRSTKPSKGICMVPKRALNIMDCESARLLKLTNSDGVHPLSFTVPRKSDAFQDDIFPDCPCLTPAHTAEEWAAGSSKLPVTMSLDPANAGKA 354          
BLAST of mRNA_M-pyrifera_M_contig79338.18628.1 vs. uniprot
Match: A0A6U3ZMW4_9STRA (Coronin n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZMW4_9STRA)

HSP 1 Score: 241 bits (614), Expect = 4.790e-74
Identity = 107/244 (43.85%), Postives = 163/244 (66.80%), Query Frame = 1
Query:    1 VKIWDVEKEEAKITLPAFPQLVSDMRWNQNGSLLGTTCKDKHARVFDVRTGEVTAEWE-PHEGGKIVNSCWITTKGEYLTAGFTRQSHRELKFWDLRKTDEPVHSTRLDQSAGVLMPFFDADTSILYVAGRGDANVRYFEYTDEAPFIHPI-DEYRSAESAKGACMLPKRSVDVSRCEVARILKLTNAKQVMGLSFIVPRKSEMYQEDLYPDCLSAVPAQTADAWFGGATVEPKRMSMDPEKTG 726
            V++WD+EK EA  T      L  D+ W+  G    T+CKDK  R+ D R G V +  + PHEG K V   ++   G+ L+ G ++QS RELK WDL+  ++P+ + ++D ++GVLMP +D DT+++Y++G+GD  +R +E+ D+AP++H + D YRS    KG CM+PKR +DV +CE AR+LKLTN + V+ LSF+VPRKS+ +Q+D++PDC S  PA T + W  G++  P+ M +DP + G
Sbjct:  164 VRVWDIEKGEAVSTFSDMGDLTQDLIWDVRGDSYATSCKDKTVRIMDARLGTVASSIDTPHEGLKSVKLVFLGETGKLLSVGASKQSARELKIWDLKNLEKPLLTEKIDTASGVLMPMYDCDTNVIYLSGKGDGIIRPYEFEDKAPYLHKLNDGYRSTVPTKGICMVPKRGLDVMKCESARLLKLTNNQGVIPLSFVVPRKSDAFQDDIFPDCSSCNPAHTCEEWMAGSSKPPETMCLDPAQAG 407          
BLAST of mRNA_M-pyrifera_M_contig79338.18628.1 vs. uniprot
Match: A0A0H5R7V6_9EUKA (Coronin n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R7V6_9EUKA)

HSP 1 Score: 239 bits (609), Expect = 2.290e-73
Identity = 113/242 (46.69%), Postives = 150/242 (61.98%), Query Frame = 1
Query:    1 VKIWDVEKEEAKITLPAFPQLVSDMRWNQNGSLLGTTCKDKHARVFDVRTGEVTAEWEPHEGGKIVNSCWITTKGEYLTAGFTRQSHRELKFWDLRKTDEPVHSTRLDQSAGVLMPFFDADTSILYVAGRGDANVRYFEYTDEAPFIHPIDEYRSAESAKGACMLPKRSVDVSRCEVARILKLTNAKQVMGLSFIVPRKSEMYQEDLYPDCLSAVPAQTADAWFGGATVEPKRMSMDPEKTG 726
            +K WD+EK+     +    +L+    WN +GSL+ +TCKDK  RVFD R        E   GGK   + WI  K +   AGF++ S R++K WD RK  + +  T LDQSAGVLMPF+D DTSILY+ G+GD N+RYFE  DE PF+H + EYRS E  KG   L KR+ D ++CE+AR L+L N   +  +SF VPRKS+ +Q D+YPD  + +PA +AD W  G    P  MSMDP  +G
Sbjct:  154 IKFWDIEKQAEIAEVTQHTELIQSFEWNMDGSLVVSTCKDKLLRVFDPRQPSTAMSTEGMAGGKSSRAVWIVDKDKICVAGFSKTSMRQIKIWDPRKLGDALSETDLDQSAGVLMPFYDPDTSILYLGGKGDGNIRYFEVVDEEPFLHILSEYRSNEPQKGLEFLAKRACDTNKCEIARALRL-NRDWIEPVSFQVPRKSDNFQADIYPDTYAGIPASSADDWISGTNRNPPLMSMDPALSG 394          
BLAST of mRNA_M-pyrifera_M_contig79338.18628.1 vs. uniprot
Match: A0A6U0GPC1_9STRA (Coronin n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0GPC1_9STRA)

HSP 1 Score: 238 bits (608), Expect = 4.110e-73
Identity = 112/251 (44.62%), Postives = 163/251 (64.94%), Query Frame = 1
Query:    1 VKIWDVEKEEAKITLPAFPQLVSDMRWNQNGSLLGTTCKDKHARVFDVRTGEVTAEWE-PHEGGKIVNSCWITTKGEYLTAGFTRQSHRELKFWDLRKTDEPVHSTRLDQSAGVLMPFFDADTSILYVAGRGDANVRYFEYTDEAPFIHPI-DEYRSAESAKGACMLPKRSVDVSRCEVARILKLTNAKQVMGLSFIVPRKSEMYQEDLYPDCLSAVPAQTADAWFGGATVEPKRMSMDP-----EKTGGA 732
            VK+WD+EK EA  T      L  D+ W+  G    T+CKDK  R+ D RTG + +  + PHEG K V   ++   G+ L+ G +RQS RELK WDL+  D+P+ + ++D ++GVLMP +D DT+++Y+ G+GD  +R FE+ D+ P++H + D +RS    KG CM+PKR +DV  CE AR+LK+TN + V  LSF+VPRKS+ +Q+D++PDC S  PA TAD W  G++  P+ M ++P      K GGA
Sbjct:  164 VKVWDIEKGEAISTFDEMGDLTQDIVWDVRGDNYATSCKDKIVRIMDARTGTIGSSLDKPHEGLKSVKLAYLGESGKLLSVGASRQSARELKIWDLKMLDKPLLTEKIDTASGVLMPLYDNDTNVVYLCGKGDGIIRPFEFEDKDPYLHRLNDGFRSTTPTKGICMVPKRGLDVMGCETARLLKVTNNQGVHPLSFVVPRKSDAFQDDIFPDCPSTNPAHTADEWLAGSSKPPETMCLNPALAGSNKAGGA 414          
BLAST of mRNA_M-pyrifera_M_contig79338.18628.1 vs. uniprot
Match: W7TD57_9STRA (Coronin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD57_9STRA)

HSP 1 Score: 238 bits (608), Expect = 5.480e-73
Identity = 111/239 (46.44%), Postives = 157/239 (65.69%), Query Frame = 1
Query:    1 VKIWDVEKEEAKITLPAFPQLVSDMRWNQNGSLLGTTCKDKHARVFDVRTGEVTAEW-EPHEGGKIVNSCWITTKGEYLTAGFTRQSHRELKFWDLRKTDEPVHSTRLDQSAGVLMPFFDADTSILYVAGRGDANVRYFEYTDEAPFIHPIDEYRSAESAKGACMLPKRSVDVSRCEVARILKLTNAKQVMGLSFIVPRKSEMYQEDLYPDCLSAVPAQTADAWFGGATVEPKRMSMDP 714
            +K+WDVE  +         QLV D++W+  G+   TTCKDK  RV D RTG +  E  + HEG K     ++  +   LT GFT+QS R+LK WDL+   + V +  +DQ+AG +MPFFD+DT++LY+AG+GD N+RY+E   EAPF+ PI EYRS   +KG C++PKR ++V RCE AR+LKLT +  V  LSFIVPRK   +Q+DL+P  ++ +P+ +A  W+ G+   P  MS+DP
Sbjct:  154 IKLWDVEGGQEGGQCHVHQQLVQDVQWDYRGNTFATTCKDKVLRVLDGRTGRLGLERKDAHEGSKSSKCVFLGDREMLLTVGFTKQSRRQLKIWDLKNLKQEVKTLDIDQAAGAIMPFFDSDTNLLYLAGKGDGNIRYYEIVSEAPFVFPISEYRSTTPSKGCCLVPKRGLNVLRCETARVLKLTTSS-VEPLSFIVPRKGGFFQDDLFPPSMAGLPSHSAPEWWAGSDKAPLLMSLDP 391          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79338.18628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DAW6_CAFRO1.970e-7953.06Coronin n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8DAW6... [more]
A0A7R9YBR7_9STRA3.980e-7749.18Coronin (Fragment) n=1 Tax=Pinguiococcus pyrenoido... [more]
A0A812NV59_9DINO8.480e-7650.21Coronin n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 ... [more]
A0A7R9VE70_9STRA1.020e-7547.52Coronin n=1 Tax=Pseudictyota dubia TaxID=2749911 R... [more]
A0A7S1G673_9STRA3.550e-7550.00Coronin n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486... [more]
A0A7S2XRW5_9STRA4.080e-7545.12Coronin n=1 Tax=Attheya septentrionalis TaxID=4202... [more]
A0A6U3ZMW4_9STRA4.790e-7443.85Coronin n=3 Tax=Ditylum brightwellii TaxID=49249 R... [more]
A0A0H5R7V6_9EUKA2.290e-7346.69Coronin n=1 Tax=Spongospora subterranea TaxID=7018... [more]
A0A6U0GPC1_9STRA4.110e-7344.62Coronin n=1 Tax=Helicotheca tamesis TaxID=374047 R... [more]
W7TD57_9STRA5.480e-7346.44Coronin n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79338contigM-pyrifera_M_contig79338:80..969 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score231.5
Seed ortholog evalue4.3e-58
Seed eggNOG ortholog112098.XP_008619834.1
Preferred nameCORO2A
KEGG koko:K13882,ko:K13886,ko:K13887
KEGG Pathwayko04145,ko05152,map04145,map05152
Hectar predicted targeting categoryother localisation
GOsGO:0000147,GO:0000278,GO:0000281,GO:0000910,GO:0001667,GO:0001725,GO:0001755,GO:0001772,GO:0001775,GO:0001776,GO:0001845,GO:0001891,GO:0001894,GO:0001906,GO:0001909,GO:0001932,GO:0001933,GO:0001952,GO:0001953,GO:0002228,GO:0002252,GO:0002260,GO:0002263,GO:0002285,GO:0002323,GO:0002366,GO:0002376,GO:0002443,GO:0002449,GO:0002520,GO:0002521,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0003779,GO:0003785,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005826,GO:0005829,GO:0005856,GO:0005884,GO:0005885,GO:0005886,GO:0005901,GO:0005903,GO:0005911,GO:0005937,GO:0005938,GO:0006469,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006887,GO:0006897,GO:0006909,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0006972,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007033,GO:0007040,GO:0007049,GO:0007154,GO:0007155,GO:0007162,GO:0007165,GO:0007166,GO:0007275,GO:0007525,GO:0007527,GO:0008017,GO:0008022,GO:0008064,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008154,GO:0008284,GO:0008360,GO:0009267,GO:0009605,GO:0009607,GO:0009611,GO:0009617,GO:0009620,GO:0009628,GO:0009719,GO:0009888,GO:0009892,GO:0009986,GO:0009987,GO:0009991,GO:0010033,GO:0010324,GO:0010467,GO:0010522,GO:0010563,GO:0010605,GO:0010631,GO:0010632,GO:0010633,GO:0010638,GO:0010639,GO:0010721,GO:0010762,GO:0010769,GO:0010771,GO:0010810,GO:0010812,GO:0010941,GO:0010959,GO:0012505,GO:0012506,GO:0014031,GO:0014032,GO:0014033,GO:0014070,GO:0014910,GO:0014912,GO:0015629,GO:0015631,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016328,GO:0016477,GO:0016482,GO:0016600,GO:0017016,GO:0017022,GO:0017048,GO:0017053,GO:0019220,GO:0019222,GO:0019899,GO:0022402,GO:0022407,GO:0022409,GO:0022411,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0023052,GO:0030001,GO:0030027,GO:0030029,GO:0030030,GO:0030036,GO:0030041,GO:0030042,GO:0030054,GO:0030097,GO:0030098,GO:0030101,GO:0030139,GO:0030154,GO:0030155,GO:0030217,GO:0030334,GO:0030335,GO:0030336,GO:0030424,GO:0030427,GO:0030479,GO:0030587,GO:0030595,GO:0030659,GO:0030666,GO:0030674,GO:0030832,GO:0030833,GO:0030834,GO:0030835,GO:0030838,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031090,GO:0031152,GO:0031252,GO:0031267,GO:0031323,GO:0031324,GO:0031334,GO:0031338,GO:0031339,GO:0031344,GO:0031345,GO:0031346,GO:0031399,GO:0031400,GO:0031410,GO:0031529,GO:0031589,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032036,GO:0032101,GO:0032102,GO:0032153,GO:0032155,GO:0032268,GO:0032269,GO:0032271,GO:0032273,GO:0032420,GO:0032421,GO:0032426,GO:0032432,GO:0032501,GO:0032502,GO:0032506,GO:0032535,GO:0032796,GO:0032879,GO:0032940,GO:0032944,GO:0032946,GO:0032956,GO:0032970,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0033554,GO:0033673,GO:0034097,GO:0034315,GO:0034316,GO:0034613,GO:0034622,GO:0034762,GO:0034765,GO:0035556,GO:0035767,GO:0035838,GO:0036089,GO:0036119,GO:0036120,GO:0038179,GO:0038180,GO:0040011,GO:0040012,GO:0040013,GO:0040017,GO:0042060,GO:0042102,GO:0042110,GO:0042127,GO:0042129,GO:0042221,GO:0042267,GO:0042325,GO:0042326,GO:0042330,GO:0042493,GO:0042592,GO:0042594,GO:0042641,GO:0042742,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043029,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043086,GO:0043087,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043242,GO:0043244,GO:0043254,GO:0043269,GO:0043299,GO:0043320,GO:0043332,GO:0043519,GO:0043521,GO:0043523,GO:0043524,GO:0043542,GO:0043547,GO:0043548,GO:0043549,GO:0043624,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044093,GO:0044387,GO:0044396,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044459,GO:0044463,GO:0044464,GO:0044764,GO:0044853,GO:0044877,GO:0045055,GO:0045087,GO:0045121,GO:0045184,GO:0045321,GO:0045335,GO:0045472,GO:0045595,GO:0045596,GO:0045785,GO:0045859,GO:0045936,GO:0046649,GO:0046677,GO:0046903,GO:0046907,GO:0046983,GO:0048365,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048731,GO:0048762,GO:0048856,GO:0048863,GO:0048864,GO:0048869,GO:0048870,GO:0048871,GO:0048872,GO:0048873,GO:0050670,GO:0050671,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050832,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0050900,GO:0050918,GO:0050920,GO:0050922,GO:0051015,GO:0051017,GO:0051020,GO:0051049,GO:0051051,GO:0051093,GO:0051094,GO:0051125,GO:0051126,GO:0051127,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051249,GO:0051251,GO:0051258,GO:0051261,GO:0051270,GO:0051271,GO:0051272,GO:0051279,GO:0051282,GO:0051286,GO:0051301,GO:0051336,GO:0051338,GO:0051345,GO:0051348,GO:0051493,GO:0051494,GO:0051495,GO:0051641,GO:0051649,GO:0051666,GO:0051674,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0051893,GO:0051895,GO:0051924,GO:0060090,GO:0060249,GO:0060255,GO:0060284,GO:0060326,GO:0060341,GO:0060485,GO:0060491,GO:0060548,GO:0060627,GO:0061024,GO:0061061,GO:0061502,GO:0061572,GO:0061640,GO:0061645,GO:0061802,GO:0061836,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070528,GO:0070663,GO:0070665,GO:0070670,GO:0070727,GO:0070838,GO:0070848,GO:0070887,GO:0070925,GO:0070938,GO:0071310,GO:0071345,GO:0071353,GO:0071363,GO:0071495,GO:0071496,GO:0071671,GO:0071672,GO:0071704,GO:0071840,GO:0071933,GO:0071944,GO:0072511,GO:0080090,GO:0080171,GO:0090066,GO:0090109,GO:0090130,GO:0090132,GO:0090135,GO:0090382,GO:0090630,GO:0090702,GO:0097327,GO:0097435,GO:0097458,GO:0097517,GO:0097708,GO:0098542,GO:0098588,GO:0098589,GO:0098590,GO:0098630,GO:0098657,GO:0098743,GO:0098796,GO:0098797,GO:0098805,GO:0098857,GO:0098858,GO:0098862,GO:0098927,GO:0099024,GO:0099080,GO:0099081,GO:0099120,GO:0099512,GO:0099513,GO:0099568,GO:0099738,GO:0110053,GO:0120025,GO:0120032,GO:0120035,GO:0120036,GO:0120038,GO:1900024,GO:1900025,GO:1900027,GO:1901214,GO:1901215,GO:1901654,GO:1901700,GO:1901879,GO:1901880,GO:1901888,GO:1901889,GO:1902410,GO:1902463,GO:1902743,GO:1902744,GO:1902745,GO:1902903,GO:1902904,GO:1902905,GO:1903037,GO:1903039,GO:1903047,GO:1903169,GO:1903391,GO:1903392,GO:1903673,GO:1904062,GO:1904643,GO:1905861,GO:1990089,GO:1990090,GO:1990819,GO:2000145,GO:2000146,GO:2000147,GO:2000392,GO:2000393,GO:2000394,GO:2000601
EggNOG free text desc.actin filament binding
EggNOG OGsCOG1985@1,KOG0303@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147,ko04812
Exons2
Model size738
Cds size738
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816696.8043435-CDS-M-pyrifera_M_contig79338:79..2391622816696.8043435-CDS-M-pyrifera_M_contig79338:79..239Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79338 80..239 -
1692278125.3580148-CDS-M-pyrifera_M_contig79338:79..2391692278125.3580148-CDS-M-pyrifera_M_contig79338:79..239Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79338 80..239 -
1622816696.8193235-CDS-M-pyrifera_M_contig79338:391..9691622816696.8193235-CDS-M-pyrifera_M_contig79338:391..969Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79338 392..969 -
1692278125.36958-CDS-M-pyrifera_M_contig79338:391..9691692278125.36958-CDS-M-pyrifera_M_contig79338:391..969Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79338 392..969 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79338.18628.1prot_M-pyrifera_M_contig79338.18628.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79338 80..969 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79338.18628.1

>prot_M-pyrifera_M_contig79338.18628.1 ID=prot_M-pyrifera_M_contig79338.18628.1|Name=mRNA_M-pyrifera_M_contig79338.18628.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=246bp
VKIWDVEKEEAKITLPAFPQLVSDMRWNQNGSLLGTTCKDKHARVFDVRT
GEVTAEWEPHEGGKIVNSCWITTKGEYLTAGFTRQSHRELKFWDLRKTDE
PVHSTRLDQSAGVLMPFFDADTSILYVAGRGDANVRYFEYTDEAPFIHPI
DEYRSAESAKGACMLPKRSVDVSRCEVARILKLTNAKQVMGLSFIVPRKS
EMYQEDLYPDCLSAVPAQTADAWFGGATVEPKRMSMDPEKTGGATA
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mRNA from alignment at M-pyrifera_M_contig79338:80..969-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79338.18628.1 ID=mRNA_M-pyrifera_M_contig79338.18628.1|Name=mRNA_M-pyrifera_M_contig79338.18628.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=890bp|location=Sequence derived from alignment at M-pyrifera_M_contig79338:80..969- (Macrocystis pyrifera P11B4 male)
GTCAAGATTTGGGACGTGGAGAAGGAGGAGGCCAAGATCACGCTCCCCGC CTTCCCTCAGCTGGTGAGTGACATGCGCTGGAACCAGAACGGTTCTCTGT TGGGCACCACATGCAAGGACAAGCACGCCCGTGTGTTCGACGTGCGCACT GGAGAAGTGACTGCAGAGTGGGAGCCCCATGAAGGTGGCAAGATCGTCAA CTCGTGCTGGATCACCACCAAGGGAGAGTACCTCACTGCCGGGTTCACCC GCCAAAGCCACCGTGAGCTCAAGTTCTGGGACTTGCGAAAGACGGACGAG CCAGTGCACTCCACTCGCCTCGACCAATCCGCCGGTGTGCTCATGCCATT CTTCGACGCGGACACTTCCATCCTCTACGTCGCTGGCAGAGGAGACGCCA ACGTCCGCTACTTTGAATACACCGACGAGGCCCCATTCATCCACCCCATT GATGAATACCGATCTGCCGAATCCGCAAAGGGCGCATGCATGCTCCCCAA GCGCTCCGTTGACGTCTCCAGGTGCGAAGTCGCACGCATCCTCAAACTCA CCAACGCGAAACAAGTCATGGGACTCAGGTAAGAGTTAAAAGGGAGAAGG ATGGGGTGGGGTGGTGGGGGGTTGGTGGCATCAGATCGTTGTTTTTGTAT TCTTGCATTCCCTTCCATGTTTCTCTGTTCACCTTCTTCCCACTGACTGT CTCTGTTCTCTTTTGCTTTTTTGTTTACAGTTTCATTGTGCCGCGCAAGA GTGAAATGTACCAGGAGGACTTGTATCCGGACTGTTTGTCAGCTGTGCCA GCACAAACTGCTGATGCTTGGTTTGGAGGTGCTACTGTGGAGCCAAAGCG TATGTCAATGGATCCTGAAAAGACTGGCGGTGCAACTGCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79338:80..969-

>mRNA_M-pyrifera_M_contig79338.18628.1 ID=mRNA_M-pyrifera_M_contig79338.18628.1|Name=mRNA_M-pyrifera_M_contig79338.18628.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1476bp|location=Sequence derived from alignment at M-pyrifera_M_contig79338:80..969- (Macrocystis pyrifera P11B4 male)
GTCAAGATTTGGGACGTGGAGAAGGAGGAGGCCAAGATCACGCTCCCCGC
CTTCCCTCAGCTGGTGAGTGACATGCGCTGGAACCAGAACGGTTCTCTGT
TGGGCACCACATGCAAGGACAAGCACGCCCGTGTGTTCGACGTGCGCACT
GGAGAAGTGACTGCAGAGTGGGAGCCCCATGAAGGTGGCAAGATCGTCAA
CTCGTGCTGGATCACCACCAAGGGAGAGTACCTCACTGCCGGGTTCACCC
GCCAAAGCCACCGTGAGCTCAAGTTCTGGGACTTGCGAAAGACGGACGAG
CCAGTGCACTCCACTCGCCTCGACCAATCCGCCGGTGTGCTCATGCCATT
CTTCGACGCGGACACTTCCATCCTCTACGTCGCTGGCAGAGGAGACGCCA
ACGTCCGCTACTTTGAATACACCGACGAGGCCCCATTCATCCACCCCATT
GATGAATACCGATCTGCCGAATCCGCAAAGGGCGCATGCATGCTCCCCAA
GCGCTCCGTTGACGTCTCCAGGTGCGAAGTCGCACGCATCCTCAAACTCA
CCAACGCGAAACAAGTCATGGGACTCAGGTCAAGATTTGGGACGTGGAGA
AGGAGGAGGCCAAGATCACGCTCCCCGCCTTCCCTCAGCTGGTGAGTGAC
ATGCGCTGGAACCAGAACGGTTCTCTGTTGGGCACCACATGCAAGGACAA
GCACGCCCGTGTGTTCGACGTGCGCACTGGAGAAGTGACTGCAGAGTGGG
AGCCCCATGAAGGTGGCAAGATCGTCAACTCGTGCTGGATCACCACCAAG
GGAGAGTACCTCACTGCCGGGTTCACCCGCCAAAGCCACCGTGAGCTCAA
GTTCTGGGACTTGCGAAAGACGGACGAGCCAGTGCACTCCACTCGCCTCG
ACCAATCCGCCGGTGTGCTCATGCCATTCTTCGACGCGGACACTTCCATC
CTCTACGTCGCTGGCAGAGGAGACGCCAACGTCCGCTACTTTGAATACAC
CGACGAGGCCCCATTCATCCACCCCATTGATGAATACCGATCTGCCGAAT
CCGCAAAGGGCGCATGCATGCTCCCCAAGCGCTCCGTTGACGTCTCCAGG
TGCGAAGTCGCACGCATCCTCAAACTCACCAACGCGAAACAAGTCATGGG
ACTCAGTTTCATTGTGCCGCGCAAGAGTGAAATGTACCAGGAGGACTTGT
ATCCGGACTGTTTGTCAGCTGTGCCAGCACAAACTGCTGATGCTTGGTTT
GGAGGTGCTACTGTGGAGCCAAAGCGTATGTCAATGGATCCTGAAAAGAC
TGGCGGTGCAACTGCTTTTCATTGTGCCGCGCAAGAGTGAAATGTACCAG
GAGGACTTGTATCCGGACTGTTTGTCAGCTGTGCCAGCACAAACTGCTGA
TGCTTGGTTTGGAGGTGCTACTGTGGAGCCAAAGCGTATGTCAATGGATC
CTGAAAAGACTGGCGGTGCAACTGCT
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