mRNA_M-pyrifera_M_contig79330.18626.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79330.18626.1 vs. uniprot
Match: A0A7S2S9H7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S9H7_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 5.060e-15 Identity = 53/127 (41.73%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 160 QWRSRLGFLTNGYRPSLFMWESVVALRKVAFAFVTTTLAPSGGGIQVATALLVLIAALVSHATYHPYHTPLLNH-LDTISLVTSCITLLGGLFIVLDDAGEAGLATGIAAPTASVFIVLANSLFFFY 537 +WR GF+ +GYR + WE VV LRK AFA V+ L P G IQ +LVL+A++ H YHPY H L+T SL +TL+ GLFI + ++FIVLAN LFF Y Sbjct: 311 KWRPVYGFIYSGYRKECYFWEIVVMLRKAAFATVSVVLRPVGVDIQTYVGMLVLVASIALHIHYHPYSAVSRLHVLETTSLSICFLTLVCGLFIYSPN------TMTTFKQGCTMFIVLANVLFFLY 431
BLAST of mRNA_M-pyrifera_M_contig79330.18626.1 vs. uniprot
Match: A0A078B8W1_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078B8W1_STYLE) HSP 1 Score: 81.6 bits (200), Expect = 1.420e-14 Identity = 56/199 (28.14%), Postives = 100/199 (50.25%), Query Frame = 1 Query: 1 RLAMNLDTRCTDPDNLALMLSMSLPIIILVRIGFPVASWVFLRSIGPRKLQTLQWRSRLGFLTNGYRPSLFMWESVVALRKVAFAFVTTTLAPSGGGIQVATALLVLIAALVSHATYHPYHTPLLNHLDTISLVTSCITLLGGLFIVLDDAGEAGLATGIAAPTASVFIVLANSLFFFY-----GAGLFIYYVYPLISK 582 R+ +L+ C + L ++LP +I+ +G P+ ++ FL +++L+ R + GFL GY+ F WE V+ RK+ F+ L +G Q LL+LI + + T +P+ T LN L+T+SL+TS +T+ G+F ++ + TG ++ V + L F+ FIY+VY + ++ Sbjct: 602 RIKTDLEILCYQGQHSMWALGVALPALIVWGLGIPMFAF-FLLQKDKLTIESLETRQKYGFLYRGYKRRFFYWEIVITYRKIFLIFIQVFLVQAGVITQAMLVLLMLILFMGVNLTKNPFQTVALNELETLSLITSLLTIFCGIFFIV-SVDTTDVETGNENSSSQVSLNENTKLMLFFIILFSNMAFFIYWVYKMFNE 798
BLAST of mRNA_M-pyrifera_M_contig79330.18626.1 vs. uniprot
Match: A0A078ADQ5_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078ADQ5_STYLE) HSP 1 Score: 81.3 bits (199), Expect = 2.090e-14 Identity = 58/193 (30.05%), Postives = 99/193 (51.30%), Query Frame = 1 Query: 1 RLAMNLDTRCTDPDNLALMLSMSLPIIILVRIGFPVASWVFLRSIGPRKLQTLQWRSRLGFLTNGYRPSLFMWESVVALRKVAFAFVTTTLAPSGGGIQVATALLVLIAALVSHATYHPYHTPLLNHLDTISLVTSCITLLGGLFIVLDDAGE----------AGLATGIAAPTASVF----IVLANSLFFFY 537 R+ +L T C P + +++P I++ +G P ++V L +KL TL+ R +LGFL NGY+ + WE V+ RK+ F+ + G Q L+LI L+ + P+ +LN L+T+SL+TS +++ G++ V + E AG++ G + S+F I+++N LFF Y Sbjct: 4049 RIYKDLQTMCWSPIHTFWSYFVAMPSIVVWGLGIPAFAFVLLTR-DRQKLNTLEIREKLGFLYNGYKHDFYYWEIVIMYRKIILIFIAVFIQNYGVMTQALIVFLLLIICLILNIKTKPFFLVVLNDLETLSLITSILSVYCGIYFVSNIPQEFQEDIPQEVKAGISLG---KSTSLFFFAVILISNLLFFLY 4237
BLAST of mRNA_M-pyrifera_M_contig79330.18626.1 vs. uniprot
Match: J9IX39_9SPIT (Uncharacterized protein n=2 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IX39_9SPIT) HSP 1 Score: 80.5 bits (197), Expect = 3.840e-14 Identity = 53/178 (29.78%), Postives = 92/178 (51.69%), Query Frame = 1 Query: 1 RLAMNLDTRCTDPDNLALMLSMSLPIIILVRIGFPVASWVFLRSIGPRKLQTLQWRSRLGFLTNGYRPSLFMWESVVALRKVAFAFVTTTLAPSGGGIQVATALLVLIAALVSHATYHPYHTPLLNHLDTISLVTSCITLLGGLFIVLDDAGEAGLATGIAAPTASVFIVLANSLFFF 534 R+ +L+ C + + L+++LP +I+ +G P+ +++ L R L + R + GFL GY+ + WE V+ RK+ F+ L G Q LL+LIA + + T +P+ T LN L+T+SL+TS +T+ G+F ++ L TG + ++ V + LF F Sbjct: 3492 RVKNDLEISCYEGQHSLWALAIALPALIVWGLGIPMFAFILLTRESKR-LDQIATRQKYGFLFRGYKQRFYYWEIVIMYRKIFLIFIQVFLVNYGVMTQAMLVLLMLIAFMSINLTKYPFQTISLNQLETLSLITSLLTIFCGVFYIV-SVDSTNLDTGETSSSSEVVLNEDTKLFLF 3667
BLAST of mRNA_M-pyrifera_M_contig79330.18626.1 vs. uniprot
Match: A0A078AZK6_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AZK6_STYLE) HSP 1 Score: 79.7 bits (195), Expect = 6.150e-14 Identity = 52/146 (35.62%), Postives = 79/146 (54.11%), Query Frame = 1 Query: 13 NLDTRCTDPDNLALMLSMSLPIIILVRIGFPVASWVFLRSIGPRKLQTLQWRSRLGFLTNGYRPSLFMWESVVALRKVAFAFVTTTLAPSGGGI-QVATALLVLIAALVSHATYHPYHTPLLNHLDTISLVTSCITLLGGLFIVLD 447 +L+ C D + ++LP I++ IG P+ + + L I L + R GFL GY+ + WE V+ RK+ F+T + S G I Q L+VLI LV + + P++T LN L+TISLVTS I++ G+F +LD Sbjct: 142 DLEILCWDKSHQFYSYFVALPSILVWGIGLPILALIILIKIR-NNLNRVSIREMYGFLYRGYKVQFYYWEIVITSRKILIIFITVFVGTSFGLIAQALIMLIVLILFLVINHQFKPFNTQALNDLETISLVTSMISVYSGIFFLLD 286
BLAST of mRNA_M-pyrifera_M_contig79330.18626.1 vs. uniprot
Match: A0A078A232_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A232_STYLE) HSP 1 Score: 79.3 bits (194), Expect = 9.150e-14 Identity = 58/191 (30.37%), Postives = 94/191 (49.21%), Query Frame = 1 Query: 1 RLAMNLDTRCTDPDNLALMLSMSLPIIILVRIGFPVASWVFLRSIGPRKLQTLQWRSRLGFLTNGYRPSLFMWESVVALRKVAFAFVTTTLAPSGGGIQVATALLVLIAALVSHATYHPYHTPLLNHLDTISLVTSCITLLGGLFIVLDDA------------GEAGLATGIAAPTASVFIVLANSLFFFY 537 R+ +L+ C P++ ++LP II+ +G P + L +KL + + R R GFL GYR + WE V+ RK+ F ++ G Q +LI L+ + P++T +LN L+T+SL+TS IT+ GLF +L+ G L+TG ++ I+++N LFF Y Sbjct: 814 RVQDDLEIICWSPEHTFYSYFVALPCIIVWGLGIPFFALAILMR-KRKKLDSFEIRQRFGFLYRGYRKDYYYWEIVIMYRKILIIFTAVFISNFGIVAQALIVFFILIIFLMINFKKQPFNTLILNDLETLSLITSMITIYCGLFFILNKPKEWIEENPDYARGSVSLSTGFQRLFFAL-ILVSNLLFFTY 1002
BLAST of mRNA_M-pyrifera_M_contig79330.18626.1 vs. uniprot
Match: J9IMW4_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IMW4_9SPIT) HSP 1 Score: 79.0 bits (193), Expect = 1.260e-13 Identity = 46/149 (30.87%), Postives = 78/149 (52.35%), Query Frame = 1 Query: 1 RLAMNLDTRCTDPDNLALMLSMSLPIIILVRIGFPVASWVFLRSIGPRKLQTLQWRSRLGFLTNGYRPSLFMWESVVALRKVAFAFVTTTLAPSGGGIQVATALLVLIAALVSHATYHPYHTPLLNHLDTISLVTSCITLLGGLFIVLD 447 R+ +L+ C D + ++LP I L +G P +++ + + L ++ R + GFL GYR + WE V+ RK+ F+ + G Q +VLIA L+++ P+ T LN L+T+SL+TS IT+ G+F V++ Sbjct: 1168 RVLNDLEVLCWDTQHKFFSYFVALPSIFLWGLGIPFFAFILMLKV-KNNLDLIEVREKFGFLYRGYRNDFYYWEIVIMYRKILIIFIAVFVKNFGVIAQALVVFIVLIAFLMTNTEKQPFSTKALNDLETLSLITSMITIYCGIFFVIN 1315
BLAST of mRNA_M-pyrifera_M_contig79330.18626.1 vs. uniprot
Match: J9F519_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9F519_9SPIT) HSP 1 Score: 79.0 bits (193), Expect = 1.290e-13 Identity = 52/178 (29.21%), Postives = 91/178 (51.12%), Query Frame = 1 Query: 1 RLAMNLDTRCTDPDNLALMLSMSLPIIILVRIGFPVASWVFLRSIGPRKLQTLQWRSRLGFLTNGYRPSLFMWESVVALRKVAFAFVTTTLAPSGGGIQVATALLVLIAALVSHATYHPYHTPLLNHLDTISLVTSCITLLGGLFIVLDDAGEAGLATGIAAPTASVFIVLANSLFFF 534 R+ +L+ C + + L+++LP +I+ +G P+ +++ L R L + R + GFL GY+ + WE V+ RK+ F+ L G Q LL+LI + + T +P+ T LN L+T+SL+TS +T+ G+F ++ L TG + ++ V + LF F Sbjct: 2268 RVKNDLEISCYEGQHSLWALAIALPALIVWGLGIPMFAFILLTRESKR-LDQIATRQKYGFLFRGYKQRFYYWEIVIMYRKIFLIFIQVFLVNYGVMTQAMLVLLMLITFMSINLTKYPFQTISLNQLETLSLITSLLTIFCGVFYIV-SVDSTNLDTGETSSSSEVVLNEDTKLFLF 2443
BLAST of mRNA_M-pyrifera_M_contig79330.18626.1 vs. uniprot
Match: J9IYZ4_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IYZ4_9SPIT) HSP 1 Score: 79.0 bits (193), Expect = 1.310e-13 Identity = 46/149 (30.87%), Postives = 78/149 (52.35%), Query Frame = 1 Query: 1 RLAMNLDTRCTDPDNLALMLSMSLPIIILVRIGFPVASWVFLRSIGPRKLQTLQWRSRLGFLTNGYRPSLFMWESVVALRKVAFAFVTTTLAPSGGGIQVATALLVLIAALVSHATYHPYHTPLLNHLDTISLVTSCITLLGGLFIVLD 447 R+ +L+ C D + ++LP I L +G P +++ + + L ++ R + GFL GYR + WE V+ RK+ F+ + G Q +VLIA L+++ P+ T LN L+T+SL+TS IT+ G+F V++ Sbjct: 3713 RVLNDLEVLCWDTQHKFFSYFVALPSIFLWGLGIPFFAFILMLKV-KNNLDLIEVREKFGFLYRGYRNDFYYWEIVIMYRKILIIFIAVFVKNFGVIAQALVVFIVLIAFLMTNTEKQPFSTKALNDLETLSLITSMITIYCGIFFVIN 3860
BLAST of mRNA_M-pyrifera_M_contig79330.18626.1 vs. uniprot
Match: J9HYM5_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HYM5_9SPIT) HSP 1 Score: 79.0 bits (193), Expect = 1.310e-13 Identity = 47/153 (30.72%), Postives = 83/153 (54.25%), Query Frame = 1 Query: 1 RLAMNLDTRCTDPDNLALMLSMSLPIIILVRIGFPVASWVFLRSIGPRKLQTLQWRSRLGFLTNGYRPSLFMWESVVALRKVAFAFVTTTLAPSGGGIQVATALLVLIAALVSHATYHPYHTPLLNHLDTISLVTSCITLLGGLFIVLDDAGE 459 R+ +L+ C + ++ ++LP I + +G P+ +++ L + L ++Q R + GFL GYR + WES++ RK+ F++ ++ G Q +VLI L+ ++ P+ T LN L+T+SLVTS IT+ GLF + + E Sbjct: 4231 RIQDDLEVVCWNAEHKLYSYFIALPSIFVWGLGIPLFAFILLSKVR-FNLDSIQVREKYGFLYRGYRKDFYFWESIIMYRKIMLIFISVFVSNLGVIAQALVVFMVLICFLIVNSKKKPFSTIALNDLETLSLVTSMITVYCGLFFISNKPEE 4382 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79330.18626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79330.18626.1 >prot_M-pyrifera_M_contig79330.18626.1 ID=prot_M-pyrifera_M_contig79330.18626.1|Name=mRNA_M-pyrifera_M_contig79330.18626.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp MNLDTRCTDPDNLALMLSMSLPIIILVRIGFPVASWVFLRSIGPRKLQTLback to top mRNA from alignment at M-pyrifera_M_contig79330:18..599- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79330.18626.1 ID=mRNA_M-pyrifera_M_contig79330.18626.1|Name=mRNA_M-pyrifera_M_contig79330.18626.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig79330:18..599- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79330:18..599- >mRNA_M-pyrifera_M_contig79330.18626.1 ID=mRNA_M-pyrifera_M_contig79330.18626.1|Name=mRNA_M-pyrifera_M_contig79330.18626.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig79330:18..599- (Macrocystis pyrifera P11B4 male)back to top |