mRNA_M-pyrifera_M_contig7930.18619.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7930.18619.1 vs. uniprot
Match: A0A7S3TS18_EMIHU (Hypothetical protein (Fragment) n=6 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TS18_EMIHU) HSP 1 Score: 129 bits (323), Expect = 2.370e-36 Identity = 55/61 (90.16%), Postives = 60/61 (98.36%), Query Frame = 3 Query: 90 PNNTMRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG 272 PN+ MRECI+IH+GQAG+QTGNACWEL+CLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG Sbjct: 15 PNSVMRECITIHLGQAGVQTGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG 75
BLAST of mRNA_M-pyrifera_M_contig7930.18619.1 vs. uniprot
Match: R7VRJ6_COLLI (Tubulin alpha chain n=1 Tax=Columba livia TaxID=8932 RepID=R7VRJ6_COLLI) HSP 1 Score: 125 bits (315), Expect = 1.190e-35 Identity = 55/76 (72.37%), Postives = 62/76 (81.58%), Query Frame = 3 Query: 45 LGIPTVLSPSISFSCPNNTMRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG 272 L +P+ + P + RECISIH+GQAG+Q GNACWELYCLEHGIQPDGQMPSDKTIGGGDD+FNTFFSETG Sbjct: 16 LALPSSMPARPGGGVPTGSARECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 91
BLAST of mRNA_M-pyrifera_M_contig7930.18619.1 vs. uniprot
Match: A0A821VI49_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821VI49_9NEOB) HSP 1 Score: 124 bits (310), Expect = 2.280e-35 Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 102 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG 272 MRECISIH GQAG+QTGNACWELYCLEHGIQPDGQMPSDKTIGGGDD+FNTFFSETG Sbjct: 1 MRECISIHAGQAGVQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 57
BLAST of mRNA_M-pyrifera_M_contig7930.18619.1 vs. uniprot
Match: A0A7R9VZ41_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VZ41_9STRA) HSP 1 Score: 125 bits (315), Expect = 2.500e-35 Identity = 56/61 (91.80%), Postives = 57/61 (93.44%), Query Frame = 3 Query: 90 PNNTMRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG 272 P N MRE +SIHIGQAGIQ GNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG Sbjct: 26 PTNNMREVLSIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG 86
BLAST of mRNA_M-pyrifera_M_contig7930.18619.1 vs. uniprot
Match: A0A3B3SI82_9TELE (Tubulin alpha-3 chain-like n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SI82_9TELE) HSP 1 Score: 126 bits (317), Expect = 2.750e-35 Identity = 56/71 (78.87%), Postives = 61/71 (85.92%), Query Frame = 3 Query: 60 VLSPSISFSCPNNTMRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG 272 +L S +NT RECISIH+GQAG+Q GNACWELYCLEHGIQPDGQMPSDKTIGGGDD+FNTFFSETG Sbjct: 15 ILKGGASLCSQHNTGRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 85
BLAST of mRNA_M-pyrifera_M_contig7930.18619.1 vs. uniprot
Match: Q41999_ARATH (Tubulin alpha-2 chain (Fragment) n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q41999_ARATH) HSP 1 Score: 123 bits (309), Expect = 2.750e-35 Identity = 54/57 (94.74%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 102 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG 272 MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQMP DKT+GGGDDAFNTFFSETG Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETG 57
BLAST of mRNA_M-pyrifera_M_contig7930.18619.1 vs. uniprot
Match: A0A1J6KH75_NICAT (Tubulin domain-containing protein n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=A0A1J6KH75_NICAT) HSP 1 Score: 124 bits (310), Expect = 3.690e-35 Identity = 55/57 (96.49%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 102 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG 272 MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQMP DKTIGGGDDAFNTFFSETG Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTIGGGDDAFNTFFSETG 57
BLAST of mRNA_M-pyrifera_M_contig7930.18619.1 vs. uniprot
Match: UPI00128F4B05 (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI00128F4B05) HSP 1 Score: 125 bits (313), Expect = 3.740e-35 Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 102 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG 272 MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETG Sbjct: 34 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETG 90
BLAST of mRNA_M-pyrifera_M_contig7930.18619.1 vs. uniprot
Match: A0A448XM44_9PLAT (Hypothetical protein n=1 Tax=Protopolystoma xenopodis TaxID=117903 RepID=A0A448XM44_9PLAT) HSP 1 Score: 124 bits (310), Expect = 3.910e-35 Identity = 53/58 (91.38%), Postives = 57/58 (98.28%), Query Frame = 3 Query: 99 TMRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG 272 T+RECISIH+GQAG+Q GNACWELYCLEHGIQPDGQMPSDKTIGGGDD+FNTFFSETG Sbjct: 3 TLRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 60
BLAST of mRNA_M-pyrifera_M_contig7930.18619.1 vs. uniprot
Match: Q1KSI0_PHAVU (Alpha-tubulin (Fragment) n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=Q1KSI0_PHAVU) HSP 1 Score: 125 bits (313), Expect = 5.040e-35 Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 3 Query: 102 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG 272 MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETG Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETG 57 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7930.18619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7930.18619.1 >prot_M-pyrifera_M_contig7930.18619.1 ID=prot_M-pyrifera_M_contig7930.18619.1|Name=mRNA_M-pyrifera_M_contig7930.18619.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=94bp PAVASRDDSPDNSPSSVSPQSSRHLSPFPAPITPCASASPSTLARPASRPback to top mRNA from alignment at M-pyrifera_M_contig7930:2915..3648- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7930.18619.1 ID=mRNA_M-pyrifera_M_contig7930.18619.1|Name=mRNA_M-pyrifera_M_contig7930.18619.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=734bp|location=Sequence derived from alignment at M-pyrifera_M_contig7930:2915..3648- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7930:2915..3648- >mRNA_M-pyrifera_M_contig7930.18619.1 ID=mRNA_M-pyrifera_M_contig7930.18619.1|Name=mRNA_M-pyrifera_M_contig7930.18619.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig7930:2915..3648- (Macrocystis pyrifera P11B4 male)back to top |