mRNA_M-pyrifera_M_contig79234.18601.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79234.18601.1
Unique NamemRNA_M-pyrifera_M_contig79234.18601.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A2D9CK38_9BACT (Cytochrome c oxidase subunit 2 n=3 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D9CK38_9BACT)

HSP 1 Score: 345 bits (886), Expect = 4.400e-115
Identity = 164/291 (56.36%), Postives = 216/291 (74.23%), Query Frame = 1
Query:    4 DSAMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGV--VTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADD--------LSDDGTMIARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWAVELPPAEKGAQLFNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRGNPAGATSDEA----NEADEAAGS 834
            D+A+EL+I   KW+W ATYPNG  S ETQPLSY+++ + GV  VT+G +YPIFY+PE+TDV+L+M S DVIHSFWIP+FRTK DV+PNRYTG+G +TPKLT  D          ++  M+ RDMWIFCAEYCGDEHSRMAATLR+VP ++Y+ K+ EW V+L P E G +++N +C+SCH +      GP   +  ++G +FGYGYDV L DG+T PRD NYYR SI+DPNA +VAG+ P M ++  QLS++ ID +IAYI++LSDRG PA A  +E     ++A+EAAGS
Sbjct:  111 DNALELRITGMKWSWIATYPNGGQSNETQPLSYNKETLDGVEVVTQGREYPIFYLPENTDVKLRMQSTDVIHSFWIPEFRTKRDVIPNRYTGFGIKTPKLTKYDSYIYRDKETGEETEMLGRDMWIFCAEYCGDEHSRMAATLRIVPQEIYEQKMAEWGVQLSPIETGEKIYNQICMSCHAIDGTKLVGPPWNSATLDGHEFGYGYDVTLEDGSTHPRDANYYRESILDPNAKIVAGYAPAMASYQGQLSDEQIDGLIAYIQSLSDRG-PAPAEGEETEAGTDQAEEAAGS 400          
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A812Y1Q0_9DINO (CtaD protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812Y1Q0_9DINO)

HSP 1 Score: 312 bits (800), Expect = 1.260e-93
Identity = 151/287 (52.61%), Postives = 193/287 (67.25%), Query Frame = 1
Query:    1 PDSAMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLT-------ADDLSDDGTMIARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWAVELPPAEKGAQLFNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRGNPAGATSDEANEADEAAGSNP 840
            P  AMELK+DAWKWAW+ TYPNGA+SPET+ LSY E  +   ++ GL+YPIFY+PEDT+V+L+M S DVIHSFWIP+FRTKMDV+PNRYTGYGF+TP+L         DD      +  RDMWIFCAEYCGDEHSRMAATLR+VP ++Y  K+  W     P   G  L+ TMC  CH++     TGPT                 Q+ DGT   RD NY R SI+DPNA +V+G+ P M +F  QLS+ DID +IA+I++LSD+   A  + ++  +AD++AGS P
Sbjct: 1875 PTDAMELKVDAWKWAWKVTYPNGASSPETKFLSYQETDIG--ISSGLEYPIFYVPEDTEVKLRMHSQDVIHSFWIPEFRTKMDVIPNRYTGYGFKTPELRDSDTVIQVDDQGISSEIPGRDMWIFCAEYCGDEHSRMAATLRIVPREIYDEKIKFWGTPKDPKVLGETLWKTMCAICHSIDGSPGTGPTWGTXXXXXXXXM----AQMDDGTEMMRDANYIRESILDPNAHIVSGYAPAMPSFQGQLSDTDIDGLIAFIQSLSDKNPNADESGEDNQQADDSAGSPP 2155          
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A3M2CIP3_9BACT (Cytochrome c oxidase subunit 2 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CIP3_9BACT)

HSP 1 Score: 265 bits (678), Expect = 7.090e-84
Identity = 140/269 (52.04%), Postives = 170/269 (63.20%), Query Frame = 1
Query:    1 PDSAMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADDLSDDGTM----IARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWAVELPPAEKGAQLFNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRG-NPAGA 792
            P  A+EL++ AWKW W  TYPNGA SPET+ L   E+   G V  G  YPIFY+PE+T V L+M S DVIH+FWIPDFRTKMDV PNR+TGY F TP L  ++   D T+      RDMW+FCAEYCGDEHSRMAAT+RVVP  +Y+ KL EW     P E G Q+    C  CH+V+    TGPT         D  YG    ++DG+T  +DDNY R SI  P A +VAG+   M +F  QL E  +D IIAY+KTLS     PAG+
Sbjct:  105 PTGALELRVSAWKWGWAITYPNGAQSPETKFL---EESADGTVV-GNKYPIFYVPENTAVSLRMSSQDVIHAFWIPDFRTKMDVYPNRFTGYTFHTPTLGLEEEVFDETVGQNIPGRDMWVFCAEYCGDEHSRMAATIRVVPQFIYEQKLAEWNAPKDPVELGKQIHEGRCAICHSVNGTPGTGPTWK-------DL-YGSQGLMSDGSTVLKDDNYIRESIYIPAAKIVAGYAGNMPSFQGQLDETQLDGIIAYMKTLSQHAPQPAGS 361          
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A7Y5VXA9_9BACT (Cytochrome c oxidase subunit II n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Y5VXA9_9BACT)

HSP 1 Score: 220 bits (560), Expect = 2.210e-66
Identity = 114/266 (42.86%), Postives = 152/266 (57.14%), Query Frame = 1
Query:    1 PDSAMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADDLSDDGTMIA---RDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWA-VELPPAEKGAQLFNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRGNPA 786
            P  A+E+ + A KW WR  YPNGA S E + L               + PIFY+P +T V+L+MVS DV+HSFW+PDFR K DVMPNRYT YGF +  +  +   + G       +D W+FCAEYCGD HS MAA +R+VP + +   +D W+   L P EKG +L+   C SCH++    +TGP+            +G     TDGT+   DD Y R SI +P   +VAG+ P M +F   LSE D+ AII Y+KT+S    PA
Sbjct:  115 PAGAIEMDVRAAKWDWRIIYPNGAESTEREKLG-----------SAKEIPIFYMPAETPVKLRMVSNDVLHSFWVPDFRGKFDVMPNRYTYYGFTSGPIKGEKKLEAGPFAGTPYQDHWLFCAEYCGDSHSEMAAVVRMVPRETWAKIVDSWSGAGLTPVEKGKRLYTIQCASCHSIDGSKNTGPSWKD--------AFGKTETFTDGTSGVVDDAYVRESIYEPAKKLVAGYGPQMASFKGILSEDDVAAIIEYMKTISVNHKPA 361          
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A7D8UH07_9BACT (Cytochrome c oxidase subunit 2 n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7D8UH07_9BACT)

HSP 1 Score: 211 bits (536), Expect = 4.420e-62
Identity = 119/278 (42.81%), Postives = 156/278 (56.12%), Query Frame = 1
Query:   10 AMELKIDAWKWAWRATYPNGATSPE-TQPLSYHE---------DPVT------GVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADD--LSDDGTMIARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWAV--ELPPAEKGAQLFNTM--CVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRG 777
            AME  ++A+ W W  TYPNG  S E T+ L   +         D  T      G     ++YPIFY+PED  +RL+M S DVIHSFW+PDFR K DV PNRYT Y FRT +L+ +D  L +      RD  I+CAEYCGD HS M A LRVV    Y   +    +  E  P  +  Q+ +    C +CH+V    +TGPT            YGYDVQLT G + P D NY R SI++P A++ AG+   M ++    SE+ ++ IIAYI++LSDRG
Sbjct:  110 AMEYSLEAYTWGWDLTYPNGIQSAEATRILDVSQRRAAIPMPGDTPTVDLEAGGPSATSMEYPIFYVPEDQPIRLRMTSRDVIHSFWVPDFRVKFDVFPNRYTSYWFRTDRLSQNDPVLPETNGQRYRDHIIYCAEYCGDFHSEMLAILRVVSRQYYAEWVQSGGIDEENTPLPELGQIISRRSGCFACHSVDGSRNTGPT--------WQNAYGYDVQLTTGESVPYDANYIRRSIVEPAAEIHAGYPNQMPSYAGVFSERQMNGIIAYIQSLSDRG 379          
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A7L9BPE0_9BACT (Cytochrome c oxidase subunit 2 n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A7L9BPE0_9BACT)

HSP 1 Score: 205 bits (522), Expect = 3.250e-60
Identity = 113/264 (42.80%), Postives = 152/264 (57.58%), Query Frame = 1
Query:   13 MELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADD-----------LSDDGTMIARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWAV-ELPPAEKGAQLFNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLS 768
            +++ + AWKW W+ TYPNGA S E    S+    V G   +  D P+FY PE T VR++M+S DV+HSFW+PDFR K+DVMP RYT Y F +  + A             LS D T +  D W+FCAEYCGD+HS MAA +R+VP + +   L++  V  LPP E G   +   C +CHT+  +  TGPT         D  YG   Q TDGT++  DD+Y R S+  P   +  GF   M  F   L EKD+ AIIA++K++S
Sbjct:  134 IDVDLTAWKWNWKVTYPNGAESRE----SWSPTEVKGF--QATDTPVFYFPEKTPVRMRMISQDVMHSFWVPDFRYKVDVMPKRYTRYWFESEAIDASKWKRVLPAAESGLSKDYTCV--DHWVFCAEYCGDQHSEMAAIIRIVPQEAFDEWLEKNGVGALPPVELGRLRWEQNCKACHTIDGKQGTGPTWK-------DL-YGSTRQFTDGTSQLADDDYIRESMYYPARKISQGFANQMQVFA--LPEKDVQAIIAFMKSIS 379          
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A7Y5W9Y8_9BACT (Cytochrome c oxidase subunit 2 n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Y5W9Y8_9BACT)

HSP 1 Score: 200 bits (508), Expect = 1.530e-58
Identity = 112/275 (40.73%), Postives = 154/275 (56.00%), Query Frame = 1
Query:    1 PDSAMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTAD--------DLSDDGTMIA---RDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEW-----AVELPPAEKGAQLFNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRG 777
            P  A+EL + A+KW W   YPNG+ S E+  +     PV          PIFY+P D  ++L+M S DV+H+FW+PDFR K D+MPNRYT   F T  L AD         L++   M      D W+FCAEYCG+EHS MAA +RVVP D    K ++W        L P + G  ++   C SCHT+     TGPT     +N     +GY+ + TDG+T   D+N  R SI+ P   +V G+   MT+F  Q+ + +++AI AY+K+LSDRG
Sbjct:  119 PGDAIELSVSAYKWNWDLEYPNGSQSRESTTIGSR--PV----------PIFYMPADRPIKLRMNSRDVMHAFWVPDFRIKADIMPNRYTSVWFNT-SLPADAATLGEAHGLNESSPMWGVPYSDHWVFCAEYCGNEHSEMAAVIRVVPED----KWNQWLGTIGTAGLSPIDLGKFIYQRKCASCHTIDGSKGTGPTW----LNK----WGYESKYTDGSTAIMDENSARESILVPAKKIVEGYSNQMTSFQGQIKDNELEAIFAYMKSLSDRG 368          
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A2E2N883_9BACT (Cytochrome c oxidase subunit 2 n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E2N883_9BACT)

HSP 1 Score: 201 bits (511), Expect = 2.670e-58
Identity = 117/277 (42.24%), Postives = 158/277 (57.04%), Query Frame = 1
Query:   10 AMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGL-DYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADDLSDDGTMIARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWAVELPPAEKGAQLFNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRGNP------AGATSDEANEAD 819
            A EL I A KW+W   Y NGA++    P     DPVTG VTK + D P+  +PED+++RL M S DVIHSFWIPD R K DV PNRYTGY FRTPKL       +     +D W+FCAEYCGD+H  MAA LRV+P   +   +  W+  L   +K AQ+    C +CH+V   +  GPT      +   F     +         +D+NY R SI++PNA +V+G +  MT++   LSE ++DA++ YI+ LSD G        AG    EA++A+
Sbjct:  139 AYELAIKAKKWSWTPVYHNGASTQWFLPTDETVDPVTGDVTKTIVDSPVIVVPEDSNIRLTMSSTDVIHSFWIPDLRIKGDVFPNRYTGYTFRTPKL-------EPGQPYQDHWVFCAEYCGDQHGAMAAVLRVMPSADFDQTVSGWSGALT-GDKVAQVQG--CFTCHSVDGTNMAGPTWLGLYGSSGTFDNAPPIDF-------KDENYIRESILNPNAKLVSG-RAGMTSYDGLLSEAELDALVFYIRGLSDAGQKVNEELEAGGDGGEASDAE 397          
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A6N2ES79_9BACT (Cytochrome c oxidase subunit 2 n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6N2ES79_9BACT)

HSP 1 Score: 192 bits (489), Expect = 1.320e-55
Identity = 106/275 (38.55%), Postives = 161/275 (58.55%), Query Frame = 1
Query:    1 PDSAMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADDLSD-DGTMIARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKL-DEWAVELPPAEKGAQLFNTM-CVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKTLSDRG-NPAGATSDEANE 813
            P  A+ L +  ++W W   YP G TS ET P         G ++     P+F  PEDT + L+M S DVIHSFW+PDFR+KMD+ PNR T + FRT KL   D+ + D     ++  ++CAEYCGD+HS+M   +RVVP +VY+  L + W   +   EKG  L +   C +CH++     TGPT        L++ YGY+ + TDG+T   D ++ R SI  P   + +G+Q VM ++  Q++E+++ A+IA+++++SD+G +P     DE  E
Sbjct:  118 PSDAVRLDLIGYRWGWNLYYPGGVTSTETLP--------PGTISAS-SVPVFMFPEDTPILLEMSSQDVIHSFWVPDFRSKMDLFPNRSTSFWFRTSKLQPGDMDNPDLGYPNKEHILYCAEYCGDQHSQMLGLIRVVPREVYENFLRNPWPEGISLVEKGKLLHSLRGCNACHSLDGSSGTGPTW-------LNW-YGYEHRYTDGSTHLADADFTRESIYYPGRKIRSGYQNVMNSYLGQINEEEMRALIAFMRSISDQGGDPTAGFPDEEEE 375          
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Match: A0A5M4D356_9CYAN (Cytochrome c oxidase subunit 2 n=1 Tax=Cyanobacteria bacterium CYA TaxID=2484221 RepID=A0A5M4D356_9CYAN)

HSP 1 Score: 188 bits (478), Expect = 6.300e-54
Identity = 113/265 (42.64%), Postives = 142/265 (53.58%), Query Frame = 1
Query:    1 PDSAMELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYIPEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADDLSDDGTMIARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWAVELPPAEKGAQL-FNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDGTTKPRDDNYYRTSIIDPNADVVAGFQ-PVMTAFGAQLSEKDIDAIIAYIKTLSDRGNPAG 789
            P  A++L +   KW W  TYPNG  S  + P+       T    K     IF +PEDT ++L M S+DVIHSFW+PD+RTKMD+ PN+YT Y F T KL     +D+ T   RD WIFCAEYCGD+HS M    RVV  D YQ  L +W+      E   QL +   C+SCHTV      GPT            +G    L  G     D+NY R SI+ P A    GFQ  VMT F   LS+++I  +I Y K+LS +  PAG
Sbjct:  128 PTDAIQLNVSGMKWDWNITYPNGEKSAYSLPMG------TKKAVK-----IFVLPEDTSIQLLMQSSDVIHSFWVPDYRTKMDLYPNQYTTYTFHTEKL-----NDEETY--RDHWIFCAEYCGDQHSEMYGIFRVVRADDYQKILTDWSAGALSCEDLGQLVYRNNCISCHTVDGNPGIGPTWLGS--------FGATRALEGGGQVVVDENYIRESILYPQAKRADGFQGQVMTPFLGLLSDEEIAGVICYFKSLSSQ--PAG 364          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79234.18601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D9CK38_9BACT4.400e-11556.36Cytochrome c oxidase subunit 2 n=3 Tax=Phycisphaer... [more]
A0A812Y1Q0_9DINO1.260e-9352.61CtaD protein n=1 Tax=Symbiodinium sp. CCMP2592 Tax... [more]
A0A3M2CIP3_9BACT7.090e-8452.04Cytochrome c oxidase subunit 2 n=1 Tax=Planctomyce... [more]
A0A7Y5VXA9_9BACT2.210e-6642.86Cytochrome c oxidase subunit II n=1 Tax=Phycisphae... [more]
A0A7D8UH07_9BACT4.420e-6242.81Cytochrome c oxidase subunit 2 n=1 Tax=Phycisphaer... [more]
A0A7L9BPE0_9BACT3.250e-6042.80Cytochrome c oxidase subunit 2 n=1 Tax=Phycisphaer... [more]
A0A7Y5W9Y8_9BACT1.530e-5840.73Cytochrome c oxidase subunit 2 n=1 Tax=Phycisphaer... [more]
A0A2E2N883_9BACT2.670e-5842.24Cytochrome c oxidase subunit 2 n=1 Tax=Phycisphaer... [more]
A0A6N2ES79_9BACT1.320e-5538.55Cytochrome c oxidase subunit 2 n=1 Tax=Phycisphaer... [more]
A0A5M4D356_9CYAN6.300e-5442.64Cytochrome c oxidase subunit 2 n=1 Tax=Cyanobacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79234contigM-pyrifera_M_contig79234:5..847 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score163.7
Seed ortholog evalue1.2e-37
Seed eggNOG ortholog1519464.HY22_05060
Preferred namecoxB
KEGG rclassRC00016,RC02794,RC03151,RC03152
KEGG koko:K02275,ko:K02305,ko:K08738
KEGG TC3.D.4.10,3.D.4.2,3.D.4.4,3.D.4.6
KEGG ReactionR00081,R00294,R10151
KEGG Pathwayko00190,ko00910,ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00190,map00910,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416
KEGG ModuleM00155,M00529,M00595
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494
EggNOG free text desc.electron transfer activity
EggNOG OGsCOG1622@1,COG1622@2,COG3474@1,COG3474@2
EC1.9.3.1
COG Functional cat.C
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size843
Cds size831
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816695.3190367-UTR-M-pyrifera_M_contig79234:4..161622816695.3190367-UTR-M-pyrifera_M_contig79234:4..16Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79234 5..16 +
1692278124.5168648-UTR-M-pyrifera_M_contig79234:4..161692278124.5168648-UTR-M-pyrifera_M_contig79234:4..16Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig79234 5..16 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816695.333818-CDS-M-pyrifera_M_contig79234:16..8471622816695.333818-CDS-M-pyrifera_M_contig79234:16..847Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79234 17..847 +
1692278124.5313437-CDS-M-pyrifera_M_contig79234:16..8471692278124.5313437-CDS-M-pyrifera_M_contig79234:16..847Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79234 17..847 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79234.18601.1prot_M-pyrifera_M_contig79234.18601.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79234 17..847 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79234.18601.1

>prot_M-pyrifera_M_contig79234.18601.1 ID=prot_M-pyrifera_M_contig79234.18601.1|Name=mRNA_M-pyrifera_M_contig79234.18601.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=277bp
MELKIDAWKWAWRATYPNGATSPETQPLSYHEDPVTGVVTKGLDYPIFYI
PEDTDVRLKMVSADVIHSFWIPDFRTKMDVMPNRYTGYGFRTPKLTADDL
SDDGTMIARDMWIFCAEYCGDEHSRMAATLRVVPMDVYQAKLDEWAVELP
PAEKGAQLFNTMCVSCHTVSDQHSTGPTQAAHNINGLDFGYGYDVQLTDG
TTKPRDDNYYRTSIIDPNADVVAGFQPVMTAFGAQLSEKDIDAIIAYIKT
LSDRGNPAGATSDEANEADEAAGSNP*
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mRNA from alignment at M-pyrifera_M_contig79234:5..847+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79234.18601.1 ID=mRNA_M-pyrifera_M_contig79234.18601.1|Name=mRNA_M-pyrifera_M_contig79234.18601.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=843bp|location=Sequence derived from alignment at M-pyrifera_M_contig79234:5..847+ (Macrocystis pyrifera P11B4 male)
CCCGACAGCGCCATGGAACTGAAGATCGATGCGTGGAAATGGGCATGGAG AGCGACTTATCCCAACGGCGCAACTTCCCCCGAGACGCAGCCGCTCAGCT ATCACGAAGATCCAGTCACAGGGGTCGTCACCAAGGGACTCGACTATCCG ATCTTCTACATCCCCGAAGACACGGATGTGCGTCTGAAGATGGTCAGCGC CGATGTGATCCACTCGTTCTGGATTCCTGATTTCCGCACGAAGATGGATG TGATGCCCAATCGCTATACAGGTTACGGCTTCCGCACACCCAAGCTCACT GCCGACGATCTAAGCGACGACGGCACGATGATCGCACGCGACATGTGGAT CTTCTGCGCCGAATACTGCGGCGACGAGCACTCACGCATGGCCGCGACCC TCCGGGTCGTGCCGATGGATGTGTATCAAGCGAAACTGGACGAATGGGCC GTCGAGTTGCCCCCAGCAGAGAAGGGTGCACAACTCTTCAACACGATGTG TGTGAGCTGTCATACCGTCAGCGATCAGCACAGCACGGGTCCGACCCAAG CTGCGCACAACATCAACGGACTCGATTTCGGCTACGGCTACGATGTGCAG CTGACCGACGGCACGACCAAGCCGCGTGATGACAACTACTACCGCACATC GATCATCGATCCCAACGCAGATGTCGTCGCGGGATTCCAGCCCGTCATGA CCGCGTTCGGCGCTCAGCTGAGTGAGAAGGACATCGACGCGATTATCGCA TACATCAAGACGCTGTCGGATCGCGGGAACCCTGCGGGCGCGACGAGCGA TGAAGCAAACGAGGCAGACGAAGCTGCCGGGAGTAATCCATGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79234:5..847+

>mRNA_M-pyrifera_M_contig79234.18601.1 ID=mRNA_M-pyrifera_M_contig79234.18601.1|Name=mRNA_M-pyrifera_M_contig79234.18601.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1662bp|location=Sequence derived from alignment at M-pyrifera_M_contig79234:5..847+ (Macrocystis pyrifera P11B4 male)
ATGGAACTGAAGATCGATGCGTGGAAATGGGCATGGAGAGCGACTTATCC
CAACGGCGCAACTTCCCCCGAGACGCAGCCGCTCAGCTATCACGAAGATC
CAGTCACAGGGGTCGTCACCAAGGGACTCGACTATCCGATCTTCTACATC
CCCGAAGACACGGATGTGCGTCTGAAGATGGTCAGCGCCGATGTGATCCA
CTCGTTCTGGATTCCTGATTTCCGCACGAAGATGGATGTGATGCCCAATC
GCTATACAGGTTACGGCTTCCGCACACCCAAGCTCACTGCCGACGATCTA
AGCGACGACGGCACGATGATCGCACGCGACATGTGGATCTTCTGCGCCGA
ATACTGCGGCGACGAGCACTCACGCATGGCCGCGACCCTCCGGGTCGTGC
CGATGGATGTGTATCAAGCGAAACTGGACGAATGGGCCGTCGAGTTGCCC
CCAGCAGAGAAGGGTGCACAACTCTTCAACACGATGTGTGTGAGCTGTCA
TACCGTCAGCGATCAGCACAGCACGGGTCCGACCCAAGCTGCGCACAACA
TCAACGGACTCGATTTCGGCTACGGCTACGATGTGCAGCTGACCGACGGC
ACGACCAAGCCGCGTGATGACAACTACTACCGCACATCGATCATCGATCC
CAACGCAGATGTCGTCGCGGGATTCCAGCCCGTCATGACCGCGTTCGGCG
CTCAGCTGAGTGAGAAGGACATCGACGCGATTATCGCATACATCAAGACG
CTGTCGGATCGCGGGAACCCTGCGGGCGCGACGAGCGATGAAGCAAACGA
GGCAGACGAAGCTGCCGGGAGTAATCCATGAATGGAACTGAAGATCGATG
CGTGGAAATGGGCATGGAGAGCGACTTATCCCAACGGCGCAACTTCCCCC
GAGACGCAGCCGCTCAGCTATCACGAAGATCCAGTCACAGGGGTCGTCAC
CAAGGGACTCGACTATCCGATCTTCTACATCCCCGAAGACACGGATGTGC
GTCTGAAGATGGTCAGCGCCGATGTGATCCACTCGTTCTGGATTCCTGAT
TTCCGCACGAAGATGGATGTGATGCCCAATCGCTATACAGGTTACGGCTT
CCGCACACCCAAGCTCACTGCCGACGATCTAAGCGACGACGGCACGATGA
TCGCACGCGACATGTGGATCTTCTGCGCCGAATACTGCGGCGACGAGCAC
TCACGCATGGCCGCGACCCTCCGGGTCGTGCCGATGGATGTGTATCAAGC
GAAACTGGACGAATGGGCCGTCGAGTTGCCCCCAGCAGAGAAGGGTGCAC
AACTCTTCAACACGATGTGTGTGAGCTGTCATACCGTCAGCGATCAGCAC
AGCACGGGTCCGACCCAAGCTGCGCACAACATCAACGGACTCGATTTCGG
CTACGGCTACGATGTGCAGCTGACCGACGGCACGACCAAGCCGCGTGATG
ACAACTACTACCGCACATCGATCATCGATCCCAACGCAGATGTCGTCGCG
GGATTCCAGCCCGTCATGACCGCGTTCGGCGCTCAGCTGAGTGAGAAGGA
CATCGACGCGATTATCGCATACATCAAGACGCTGTCGGATCGCGGGAACC
CTGCGGGCGCGACGAGCGATGAAGCAAACGAGGCAGACGAAGCTGCCGGG
AGTAATCCATGA
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