mRNA_M-pyrifera_M_contig7909.18575.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7909.18575.1 vs. uniprot
Match: D8LTI0_ECTSI (DUF1736 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTI0_ECTSI) HSP 1 Score: 73.2 bits (178), Expect = 6.830e-13 Identity = 29/41 (70.73%), Postives = 35/41 (85.37%), Query Frame = 1 Query: 1 NHDVWTDSPWSDMWRHDFWGQKMADAESHKSFRPLTTLTYR 123 N DVW S W D+WRHDFWGQ++A AESHKSFRPLTT+T++ Sbjct: 57 NQDVWAGSSWGDIWRHDFWGQQIAHAESHKSFRPLTTVTFK 97
BLAST of mRNA_M-pyrifera_M_contig7909.18575.1 vs. uniprot
Match: A0A7R9HYY6_9NEOP (Dolichyl-phosphate-mannose--protein mannosyltransferase n=1 Tax=Timema bartmani TaxID=61472 RepID=A0A7R9HYY6_9NEOP) HSP 1 Score: 72.8 bits (177), Expect = 1.350e-12 Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 1 NHDVWTDSPWSDMWRHDFWGQKMADAESHKSFRPLTTLTYRLNNMLAQALSAGRSASDGNPEENVDLMAAEINRGAGPQYTDAPGFHLFNVILHGATCASSTWLFRLI 324 N DV ++P SD+W HDFWG + + SH S+RPLTTL+++LN AL AG DL A ++ GFH+ NV+LH AT A+ TW L+ Sbjct: 35 NDDVLPETPLSDLWLHDFWGTPLRHSGSHGSYRPLTTLSFKLN-----ALWAGG-----------DLRAVPSSK----------GFHVVNVVLHSATTAAFTWWIGLL 116
BLAST of mRNA_M-pyrifera_M_contig7909.18575.1 vs. uniprot
Match: A0A7R9FHE4_9NEOP (Dolichyl-phosphate-mannose--protein mannosyltransferase n=1 Tax=Timema tahoe TaxID=61484 RepID=A0A7R9FHE4_9NEOP) HSP 1 Score: 72.8 bits (177), Expect = 1.370e-12 Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 1 NHDVWTDSPWSDMWRHDFWGQKMADAESHKSFRPLTTLTYRLNNMLAQALSAGRSASDGNPEENVDLMAAEINRGAGPQYTDAPGFHLFNVILHGATCASSTWLFRLI 324 N DV ++P SD+W HDFWG + + SH S+RPLTTL+++LN AL AG DL A ++ GFH+ NV+LH AT A+ TW L+ Sbjct: 85 NDDVLPETPLSDLWLHDFWGTPLRHSGSHGSYRPLTTLSFKLN-----ALWAGG-----------DLRAVPSSK----------GFHVVNVVLHSATTAAFTWWIGLL 166
BLAST of mRNA_M-pyrifera_M_contig7909.18575.1 vs. uniprot
Match: A0A7R9CFW2_TIMCR (Dolichyl-phosphate-mannose--protein mannosyltransferase n=2 Tax=Timema TaxID=61471 RepID=A0A7R9CFW2_TIMCR) HSP 1 Score: 72.4 bits (176), Expect = 1.850e-12 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 1 NHDVWTDSPWSDMWRHDFWGQKMADAESHKSFRPLTTLTYRLNNMLAQALSAGRSASDGNPEENVDLMAAEINRGAGPQYTDAPGFHLFNVILHGATCASSTWLFRLI 324 N DV +++P S++W HDFWG + + SH S+RPLTTL+++LN AL AG DL A ++ GFH+ NVILH AT A+ TW L+ Sbjct: 35 NDDVLSETPLSELWFHDFWGTPLRHSGSHGSYRPLTTLSFKLN-----ALWAGG-----------DLRAVSSSK----------GFHVVNVILHSATTAAFTWWIGLL 116
BLAST of mRNA_M-pyrifera_M_contig7909.18575.1 vs. uniprot
Match: A0A7R9P2W6_TIMCA ((California timema) hypothetical protein n=1 Tax=Timema californicum TaxID=61474 RepID=A0A7R9P2W6_TIMCA) HSP 1 Score: 72.4 bits (176), Expect = 1.870e-12 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 1 NHDVWTDSPWSDMWRHDFWGQKMADAESHKSFRPLTTLTYRLNNMLAQALSAGRSASDGNPEENVDLMAAEINRGAGPQYTDAPGFHLFNVILHGATCASSTWLFRLI 324 N DV ++P S++W HDFWG + + SH S+RPLTTL+++LN A+ AG DL AA ++ GFH+ NVILH AT A+ TW L+ Sbjct: 160 NDDVLPETPLSELWLHDFWGTPLRHSGSHGSYRPLTTLSFKLN-----AVWAGG-----------DLRAASSSK----------GFHVVNVILHSATTAAFTWWIGLL 241
BLAST of mRNA_M-pyrifera_M_contig7909.18575.1 vs. uniprot
Match: A0A7R9JXW1_TIMGE (Dolichyl-phosphate-mannose--protein mannosyltransferase n=4 Tax=Timema TaxID=61471 RepID=A0A7R9JXW1_TIMGE) HSP 1 Score: 70.5 bits (171), Expect = 9.040e-12 Identity = 42/108 (38.89%), Postives = 56/108 (51.85%), Query Frame = 1 Query: 1 NHDVWTDSPWSDMWRHDFWGQKMADAESHKSFRPLTTLTYRLNNMLAQALSAGRSASDGNPEENVDLMAAEINRGAGPQYTDAPGFHLFNVILHGATCASSTWLFRLI 324 N DV ++P SD+W HDFWG + + SH S+RPLTTL+++LN AL AG G P + GFH+ NV+LH AT A+ TW L+ Sbjct: 98 NDDVLPETPLSDLWLHDFWGTPLRHSGSHGSYRPLTTLSFKLN-----ALWAG-----GEPRT----------------VPSSKGFHVVNVVLHSATTAAFTWWIGLL 179
BLAST of mRNA_M-pyrifera_M_contig7909.18575.1 vs. uniprot
Match: A9UT00_MONBE (Dolichyl-phosphate-mannose--protein mannosyltransferase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UT00_MONBE) HSP 1 Score: 70.1 bits (170), Expect = 1.190e-11 Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 1 Query: 1 NHDVWTDSPWSDMWRHDFWGQKMADAESHKSFRPLTTLTYRLNNMLAQALSAG 159 N DV D+ WSD+W HDFWG M A SHKS+RPLT T++LNN+LA AG Sbjct: 89 NPDVRLDTSWSDLWAHDFWGTPMTAARSHKSYRPLTVATFKLNNLLAGMAPAG 141
BLAST of mRNA_M-pyrifera_M_contig7909.18575.1 vs. uniprot
Match: A0A8J9Z1F4_BRALA (TMTC4 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9Z1F4_BRALA) HSP 1 Score: 68.2 bits (165), Expect = 5.570e-11 Identity = 38/113 (33.63%), Postives = 55/113 (48.67%), Query Frame = 1 Query: 1 NHDVWTDSPWSDMWRHDFWGQKMADAESHKSFRPLTTLTYRLNNMLAQALSAGRSASDGNPEENVDLMAAEINRGAGPQYTDAPGFHLFNVILHGATCASSTWLFRLIFAGEK 339 N D+ +++P +++RHDFWG+ +A SHKS+RPLT LT+RLN+ A LS S FH N++LH A C +F +IF G + Sbjct: 88 NKDLLSETPVWELFRHDFWGKNLASKTSHKSYRPLTVLTFRLNHWFAGGLSQPWS------------------------------FHAVNLLLHAAICVQLLHVFSVIFGGVR 170
BLAST of mRNA_M-pyrifera_M_contig7909.18575.1 vs. uniprot
Match: UPI000B4EBC00 (transmembrane and TPR repeat-containing protein 4 isoform X4 n=1 Tax=Meriones unguiculatus TaxID=10047 RepID=UPI000B4EBC00) HSP 1 Score: 68.2 bits (165), Expect = 5.600e-11 Identity = 37/113 (32.74%), Postives = 54/113 (47.79%), Query Frame = 1 Query: 1 NHDVWTDSPWSDMWRHDFWGQKMADAESHKSFRPLTTLTYRLNNMLAQALSAGRSASDGNPEENVDLMAAEINRGAGPQYTDAPGFHLFNVILHGATCASSTWLFRLIFAGEK 339 N D+ D+P D+W HDFWG +++ SHKS+RPLT LT+R+N +LS G GFH+ N++LHGA +F ++F G + Sbjct: 52 NKDLRADTPLGDLWHHDFWGSRLSSNTSHKSYRPLTVLTFRIN----YSLSGG---------------------------FHPVGFHVVNILLHGAVSVLMLDVFSVLFGGLR 133
BLAST of mRNA_M-pyrifera_M_contig7909.18575.1 vs. uniprot
Match: A0A7S3P8A2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P8A2_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 7.570e-11 Identity = 39/105 (37.14%), Postives = 51/105 (48.57%), Query Frame = 1 Query: 25 PWSDMWRHDFWGQKMADAESHKSFRPLTTLTYRLNNMLAQALSAGRSASDGNPEENVDLMAAEINRGAGPQYTDAPGFHLFNVILHGATCASSTWLFRLIFAGEK 339 PW+ ++ DFWG M+D +SHKSFRP+TTL+++LN MLA+ L E V GFH+ NVILHG A T +F G Sbjct: 65 PWTQVFTRDFWGTPMSDVQSHKSFRPITTLSFKLNWMLAEKL------------ETVGTDDHTF------------GFHVVNVILHGIVTALVTEAAAFVFCGSS 145 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7909.18575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7909.18575.1 >prot_M-pyrifera_M_contig7909.18575.1 ID=prot_M-pyrifera_M_contig7909.18575.1|Name=mRNA_M-pyrifera_M_contig7909.18575.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp NHDVWTDSPWSDMWRHDFWGQKMADAESHKSFRPLTTLTYRLNNMLAQALback to top mRNA from alignment at M-pyrifera_M_contig7909:10951..12233- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7909.18575.1 ID=mRNA_M-pyrifera_M_contig7909.18575.1|Name=mRNA_M-pyrifera_M_contig7909.18575.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1283bp|location=Sequence derived from alignment at M-pyrifera_M_contig7909:10951..12233- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7909:10951..12233- >mRNA_M-pyrifera_M_contig7909.18575.1 ID=mRNA_M-pyrifera_M_contig7909.18575.1|Name=mRNA_M-pyrifera_M_contig7909.18575.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig7909:10951..12233- (Macrocystis pyrifera P11B4 male)back to top |