mRNA_M-pyrifera_M_contig79068.18569.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79068.18569.1
Unique NamemRNA_M-pyrifera_M_contig79068.18569.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig79068.18569.1 vs. uniprot
Match: A0A2D8GHJ0_9ACTN (Branched-chain amino acid ABC transporter permease n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GHJ0_9ACTN)

HSP 1 Score: 414 bits (1065), Expect = 5.960e-143
Identity = 205/298 (68.79%), Postives = 258/298 (86.58%), Query Frame = 1
Query:    1 FVLVFKASQVLNFATGGIAMAGAIFMSILIADRGFPFLPFTNPLAPAAGETASVPLWMLHVVIAMLFAALLAVVLERVAIRPLVGQPLFALAVVTLGIEVALGPFNRDATAISSRSLGVPWKTNSWEIWGAIIPKSFLAAVIAAILAFAAVLMFYRSRMGVAMRAVAFDQEAAMAQGINVGRVFSISWALGGSIAALGAIMFGMAPFPPSGAVSQEVHPVLAFRVLPVIILGGLDSVMGALYGGLIIASFEIFAGEYLSGYNSILGPGYSTIVPYIVMLVVLLVKPYGLFGTAEIRRV 894
            FV++FKA+QVLNFA G ++MAGA+FM+IL+AD G PFLPF NP APA GE A++ +W ++V+IA+  AALL +V+ER+AIRP+VGQPLFA+AV+TLGIEVA+ PFN DATA+  RSLGVPWK   W++ GA+IPKS++ AV  A+     V+ F+R+++GVAMRAVAFDQEAAMAQGINVGRVF+I+WA+G ++AALGAI++GMAPFPP G+VSQE+HP+LA RVLPVI+LGGLDSV GA+YGG+IIA+ E+FAG+YLS +NS LG GYSTIVPY+VML +LLVKPYGLFGT EIRRV
Sbjct:   37 FVIIFKATQVLNFAAGALSMAGAMFMTILVADGGLPFLPFDNPFAPAEGENATIIMWFVNVLIALALAALLGLVIERIAIRPMVGQPLFAMAVITLGIEVAIRPFNLDATALEGRSLGVPWKAEFWDVGGAVIPKSYVVAVFIAVATGLGVVYFFRTKLGVAMRAVAFDQEAAMAQGINVGRVFAIAWAMGTALAALGAIVYGMAPFPPGGSVSQEIHPLLALRVLPVIVLGGLDSVAGAIYGGMIIATAEVFAGQYLSQWNSTLGSGYSTIVPYLVMLFMLLVKPYGLFGTPEIRRV 334          
BLAST of mRNA_M-pyrifera_M_contig79068.18569.1 vs. uniprot
Match: A0A7Y1UT72_9ACTN (Branched-chain amino acid ABC transporter permease n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y1UT72_9ACTN)

HSP 1 Score: 378 bits (970), Expect = 1.420e-128
Identity = 195/299 (65.22%), Postives = 241/299 (80.60%), Query Frame = 1
Query:    1 FVLVFKASQVLNFATGGIAMAGAIFMSILIADRGFPFLPFTNPLAPAAGETASVPLWMLHVVIAMLFAALLAVVLERVAIRPLVGQPLFALAVVTLGIEVALGPFNRDATAI-SSRSLGVPWKTNSWEIWGAIIPKSFLAAVIAAILAFAAVLMFYRSRMGVAMRAVAFDQEAAMAQGINVGRVFSISWALGGSIAALGAIMFGMAPFPPSGAVSQEVHPVLAFRVLPVIILGGLDSVMGALYGGLIIASFEIFAGEYLSGYNSILGPGYSTIVPYIVMLVVLLVKPYGLFGTAEIRRV 894
            FV+VFKA+QVLNFA GGIAMAGA+F+SI++ D GFPFLPF NP      E   + +W+L + +AM+  A+LA+VLERVAIRP+VGQPLFALA++TLGIE+A+  FNRDA     +R+L +PW  + WEI+GA +  S+LAAVIAA+ +F  V  FYRSR+GVAMRAVAFDQEAAMAQGINVGRVF I+WA+GG++A LGA+++ MAPF P GAVS ++HPVLAFR LPVIILGGLDSV GAL GGL+I   E+ AG+Y S Y ++LG GY  IVPY++ML VLLV+PYGLFGT EIRRV
Sbjct:   34 FVIVFKATQVLNFAHGGIAMAGALFLSIMVNDDGFPFLPFGNPFV--GDEPPGLAIWLLMLALAMVLTAILAMVLERVAIRPMVGQPLFALAIITLGIEIAISAFNRDAVNTPDARTLHIPWGVDQWEIFGARVNHSYLAAVIAALFSFGVVFFFYRSRLGVAMRAVAFDQEAAMAQGINVGRVFQIAWAIGGALACLGAVIYAMAPFGPQGAVSADLHPVLAFRALPVIILGGLDSVTGALIGGLVIGGAEVLAGQYFSDYTTVLGVGYQAIVPYVIMLGVLLVRPYGLFGTEEIRRV 330          
BLAST of mRNA_M-pyrifera_M_contig79068.18569.1 vs. uniprot
Match: A0A3M2H0P1_ACTSX (Branched-chain amino acid ABC transporter permease n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2H0P1_ACTSX)

HSP 1 Score: 303 bits (775), Expect = 1.420e-98
Identity = 160/298 (53.69%), Postives = 213/298 (71.48%), Query Frame = 1
Query:    1 FVLVFKASQVLNFATGGIAMAGAIFMSILIADRGFPFLPFTNPLAPAAGETASVPLWMLHVVIAMLFAALLAVVLERVAIRPLVGQPLFALAVVTLGIEVALGPFNRDATAISSRSLGVPWKTNSWEIWGAIIPKSFLAAVIAAILAFAAVLMFYRSRMGVAMRAVAFDQEAAMAQGINVGRVFSISWALGGSIAALGAIMFGMAPFPPSGAVSQEVHPVLAFRVLPVIILGGLDSVMGALYGGLIIASFEIFAGEYLSGYNSILGPGYSTIVPYIVMLVVLLVKPYGLFGTAEIRRV 894
            FVL+FKA+Q +NFA G +AM+GA+F+S ++AD   P   + NPL    G +     W L  V+A+ FAA+L +V+ER+ IRP++G+PLF++AV+TLG+E+ L  FN D   I  R+L +PW   S+++   ++  S++AAVI A +AF AV  FYRSRMG+AMRAVAFDQEAAMAQGINVGRVF+I+W  G  +AA+G I     P   + AV  E   ++AFR LP +ILGGLDSV GAL GG+I+   EIFAG+Y +G   +LG GY  IVPY+VML+ L+V+PYGLFGT EIRRV
Sbjct:   66 FVLIFKATQTVNFAQGAMAMSGALFLSFMVADGHIPLTTWKNPLLDVGGPSWLG--WALSAVVALAFAAVLGLVIERLTIRPMIGEPLFSVAVITLGLEIVLRVFNNDTVKIDYRNLNIPWGVKSFQVGDVVVQWSYVAAVITAAVAFGAVFFFYRSRMGIAMRAVAFDQEAAMAQGINVGRVFAIAWGAGAVLAAIGGIFATQPPVKQTNAVEPETA-LIAFRALPAVILGGLDSVTGALLGGIIVGLAEIFAGQYAAGEVDLLGAGYPLIVPYVVMLIGLIVRPYGLFGTEEIRRV 360          
BLAST of mRNA_M-pyrifera_M_contig79068.18569.1 vs. uniprot
Match: A0A7Y2ID16_9ACTN (Branched-chain amino acid ABC transporter permease n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2ID16_9ACTN)

HSP 1 Score: 297 bits (761), Expect = 3.540e-98
Identity = 152/240 (63.33%), Postives = 193/240 (80.42%), Query Frame = 1
Query:  178 HVVIAMLFAALLAVVLERVAIRPLVGQPLFALAVVTLGIEVALGPFNRDATAI-SSRSLGVPWKTNSWEIWGAIIPKSFLAAVIAAILAFAAVLMFYRSRMGVAMRAVAFDQEAAMAQGINVGRVFSISWALGGSIAALGAIMFGMAPFPPSGAVSQEVHPVLAFRVLPVIILGGLDSVMGALYGGLIIASFEIFAGEYLSGYNSILGPGYSTIVPYIVMLVVLLVKPYGLFGTAEIRRV 894
            ++ +AM   A+LA+VLER+AIRP++GQPLF+LA++TLG+E+AL  FN D   + ++RSL VPW    W + GA I  S+LAA+IAA  +F  V +FYRSR+GVAMRAVAFDQEAAMAQGINVGRVF I+W +GG++A LGA+++ MAPF P GAVS ++HPVLAFR LPVI+LGGLDSV+GAL GG II   E+ AG+YL+ Y S+LG GY TIVPY +ML VL+V+P+GLFGT EIRRV
Sbjct:    1 NLAVAMALTAILAMVLERLAIRPMIGQPLFSLAIITLGLEIALRAFNSDPVNVPTARSLRVPWSNQFWTVGGANINHSYLAALIAAAFSFTVVYLFYRSRLGVAMRAVAFDQEAAMAQGINVGRVFQIAWGIGGALACLGAVIYAMAPFGPQGAVSADLHPVLAFRALPVIVLGGLDSVIGALIGGFIIGGAEVLAGQYLASYTSVLGVGYQTIVPYAIMLGVLIVRPFGLFGTPEIRRV 240          
BLAST of mRNA_M-pyrifera_M_contig79068.18569.1 vs. uniprot
Match: A0A6B0ZGJ1_9ACTN (Branched-chain amino acid ABC transporter permease n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZGJ1_9ACTN)

HSP 1 Score: 299 bits (766), Expect = 6.670e-98
Identity = 163/298 (54.70%), Postives = 215/298 (72.15%), Query Frame = 1
Query:    1 FVLVFKASQVLNFATGGIAMAGAIFMSILIADRGFPFLPFTNPLAPAAGETASVPLWMLHVVIAMLFAALLAVVLERVAIRPLVGQPLFALAVVTLGIEVALGPFNRDATAISSRSLGVPWKTNSWEIWGAIIPKSFLAAVIAAILAFAAVLMFYRSRMGVAMRAVAFDQEAAMAQGINVGRVFSISWALGGSIAALGAIMFGMAPFPPSGAVSQEVHPVLAFRVLPVIILGGLDSVMGALYGGLIIASFEIFAGEYLSGYNSILGPGYSTIVPYIVMLVVLLVKPYGLFGTAEIRRV 894
            FVL+FKA++ +NFA GG+A AGA+F++ L+AD   PF    NPL    G  A V  W L V +A++FAA L +V+ER+AIRP+VG+PLF++AV+TLG+E+ L  FN DA     R LG PW  + + + GA+I  SF+AA++AA  AF AV  FYRSR+G+AMRAVAFDQEAAMAQG+NVGRVF+++WA G  +AA+G I     P   + +V Q    + AFR LP +ILGGLDS  GAL GGLI+ + EI+AG+Y + ++  LG GY  IVPY+VM++ LLV+PYGLFGT EIRRV
Sbjct:   17 FVLIFKATRTINFAQGGLAAAGALFVTFLVADGHIPFTTIANPLRDVGGP-AWVG-WSLSVAVALVFAAALGLVIERLAIRPMVGKPLFSVAVITLGLEIMLRVFNNDAVETLFRPLGAPWGLDGFTVGGALINWSFVAAMVAAAAAFVAVYRFYRSRLGIAMRAVAFDQEAAMAQGVNVGRVFAVAWAAGAVLAAVGGIFATQPPISQTFSVDQGTANI-AFRALPAVILGGLDSATGALLGGLIVGAAEIYAGQYAASHSDWLGAGYPLIVPYLVMIIGLLVRPYGLFGTPEIRRV 311          
BLAST of mRNA_M-pyrifera_M_contig79068.18569.1 vs. uniprot
Match: A0A2E0SY80_9ACTN (Branched-chain amino acid ABC transporter permease n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0SY80_9ACTN)

HSP 1 Score: 296 bits (758), Expect = 4.360e-96
Identity = 158/298 (53.02%), Postives = 212/298 (71.14%), Query Frame = 1
Query:    1 FVLVFKASQVLNFATGGIAMAGAIFMSILIADRGFPFLPFTNPLAPAAGETASVPLWMLHVVIAMLFAALLAVVLERVAIRPLVGQPLFALAVVTLGIEVALGPFNRDATAISSRSLGVPWKTNSWEIWGAIIPKSFLAAVIAAILAFAAVLMFYRSRMGVAMRAVAFDQEAAMAQGINVGRVFSISWALGGSIAALGAIMFGMAPFPPSGAVSQEVHPVLAFRVLPVIILGGLDSVMGALYGGLIIASFEIFAGEYLSGYNSILGPGYSTIVPYIVMLVVLLVKPYGLFGTAEIRRV 894
            FVL+FKA+Q +NFA G +A++GA+F+S  +AD   PF    NP+    G       W + +V+AM+FAA+L +V+ER+ IRP+VGQPLF++AV+TLG+E+AL  FN D   +  R++ VPW  + +++    I  S +AA++ A +AF AV +FYRSR+G+AMRAVAFDQEAAMAQGINVGRVF+I+WA G  +A +G +     P   S AV  E   + AFR LP +ILGGLDS  GAL GGLI+ + EIFAG+Y +G   ILG GY  IVPY+VM++ LL++PYGLFGT EIRRV
Sbjct:   60 FVLIFKATQTVNFAQGALAVSGALFLSFAVADDHIPFTTIDNPINSLPGPDWFH--WGVSLVLAMIFAAILGLVIERLTIRPMVGQPLFSVAVITLGLEIALRVFNNDTVKVEFRNVEVPWGIDGFQVGKETINYSIIAAMVTAAIAFVAVFIFYRSRLGIAMRAVAFDQEAAMAQGINVGRVFAIAWAAGAVLAMIGGVFATQPPVKQSLAVDNETANI-AFRALPAVILGGLDSATGALLGGLIVGAAEIFAGQYAAGETDILGAGYPVIVPYVVMMIGLLIRPYGLFGTPEIRRV 354          
BLAST of mRNA_M-pyrifera_M_contig79068.18569.1 vs. uniprot
Match: A0A6N2DU66_9ACTN (Branched-chain amino acid ABC transporter permease n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DU66_9ACTN)

HSP 1 Score: 294 bits (753), Expect = 2.820e-95
Identity = 157/298 (52.68%), Postives = 211/298 (70.81%), Query Frame = 1
Query:    1 FVLVFKASQVLNFATGGIAMAGAIFMSILIADRGFPFLPFTNPLAPAAGETASVPLWMLHVVIAMLFAALLAVVLERVAIRPLVGQPLFALAVVTLGIEVALGPFNRDATAISSRSLGVPWKTNSWEIWGAIIPKSFLAAVIAAILAFAAVLMFYRSRMGVAMRAVAFDQEAAMAQGINVGRVFSISWALGGSIAALGAIMFGMAPFPPSGAVSQEVHPVLAFRVLPVIILGGLDSVMGALYGGLIIASFEIFAGEYLSGYNSILGPGYSTIVPYIVMLVVLLVKPYGLFGTAEIRRV 894
            FVL+FKASQV+NF+ G +AM GA+F+S L+AD   PF    NPL    G       W L + +A+ FAALL +V+ER+ IRP+VG+P+FA+AV+TLG+E+ L  F  DA  I  RSL +PW   ++ ++GA +  S++A +I A +AF AV +FY++R G++MRAVA DQEAAMAQGINVGRVF+I+W  G  +A LG I     P    GAV  +   ++AFR LP +ILGGLDSV GAL GGL+I + EI+AG+YL+G  + LG GY  I+PY VM++ L+V+PYGLFGT E+RRV
Sbjct:   64 FVLIFKASQVVNFSQGALAMCGALFLSFLVADGHIPFTTIRNPLMDLPGPEWLG--WFLSLFVALFFAALLGLVIERITIRPMVGEPIFAVAVITLGLEIVLRTFATDAVKIQFRSLEIPWGNQTFSLFGATLNWSYIAMMITAGIAFVAVYLFYKTRTGISMRAVAHDQEAAMAQGINVGRVFAIAWGAGAVLATLGGIFSTQPPVKQIGAVEPDTA-LVAFRALPAVILGGLDSVQGALVGGLLIGAAEIYAGQYLAGETAWLGAGYPVIIPYFVMIIGLIVRPYGLFGTPEVRRV 358          
BLAST of mRNA_M-pyrifera_M_contig79068.18569.1 vs. uniprot
Match: A0A848UKN6_9ACTN (Branched-chain amino acid ABC transporter permease n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UKN6_9ACTN)

HSP 1 Score: 293 bits (750), Expect = 7.770e-95
Identity = 157/302 (51.99%), Postives = 209/302 (69.21%), Query Frame = 1
Query:    1 FVLVFKASQVLNFATGGIAMAGAIFMSILIADRGFPFLPF----TNPLAPAAGETASVPLWMLHVVIAMLFAALLAVVLERVAIRPLVGQPLFALAVVTLGIEVALGPFNRDATAISSRSLGVPWKTNSWEIWGAIIPKSFLAAVIAAILAFAAVLMFYRSRMGVAMRAVAFDQEAAMAQGINVGRVFSISWALGGSIAALGAIMFGMAPFPPSGAVSQEVHPVLAFRVLPVIILGGLDSVMGALYGGLIIASFEIFAGEYLSGYNSILGPGYSTIVPYIVMLVVLLVKPYGLFGTAEIRRV 894
            FVL+FKA++V+NF+ G +AM GA+F+S ++ D   P + F     NPL    G       W L  ++A+ FAALL +++ER+AIRP++GQPLF++AV+TLG+E+AL     D   I  RS+  PW    + I    +  ++ AA+I A +AF AV  FYRSRMG+AMRAVA DQEAAMAQGIN+GRVF+I+W  G  +AALG +     P   +GA+  E   ++AFR LP +ILGGLDSV GAL GGL++   EI+AG+YLSGY  +LG GY  IVPY+VM++ LLV+PYGLFGT EIRRV
Sbjct:   59 FVLIFKATEVVNFSQGALAMIGALFISFMVVDENLPIIGFFTEVPNPLYQIGGPEWI--RWGLSAIVALAFAALLGLLIERIAIRPMIGQPLFSVAVITLGLEIALRVLANDTVKIQFRSVDAPWGNGGFNIGDGFVNYAYFAAMITAAIAFVAVFFFYRSRMGIAMRAVARDQEAAMAQGINIGRVFAIAWGAGAVLAALGGLFSTQPPVRQTGAIDPE-SALVAFRALPAVILGGLDSVQGALIGGLLVGLAEIYAGQYLSGYTDVLGSGYPLIVPYVVMIIGLLVRPYGLFGTPEIRRV 357          
BLAST of mRNA_M-pyrifera_M_contig79068.18569.1 vs. uniprot
Match: A0A7K2BR69_9ACTN (Branched-chain amino acid ABC transporter permease n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2BR69_9ACTN)

HSP 1 Score: 288 bits (738), Expect = 1.160e-93
Identity = 156/298 (52.35%), Postives = 208/298 (69.80%), Query Frame = 1
Query:    1 FVLVFKASQVLNFATGGIAMAGAIFMSILIADRGFPFLPFTNPLAPAAGETASVPLWMLHVVIAMLFAALLAVVLERVAIRPLVGQPLFALAVVTLGIEVALGPFNRDATAISSRSLGVPWKTNSWEIWGAIIPKSFLAAVIAAILAFAAVLMFYRSRMGVAMRAVAFDQEAAMAQGINVGRVFSISWALGGSIAALGAIMFGMAPFPPSGAVSQEVHPVLAFRVLPVIILGGLDSVMGALYGGLIIASFEIFAGEYLSGYNSILGPGYSTIVPYIVMLVVLLVKPYGLFGTAEIRRV 894
            FVL+FKA+Q +NFA G +A  GA+F+  L+ D   PF   +NP+    G       W L+V +A+ FAA + +V+ER+AIRP++G+PLF++AV+TLG+E+    FN DA  +  R LG+PW  + +   GA I  SF+A +I A  AFAAV +F+RSR+G+AMRAVAFDQEAAMAQG++VGRVF+I+WA G  +AA+G I     P   + +V QE   + AFR LP +ILGGLDS  GAL GGL++   EI+AG+Y  G  S LG GY  IVPY+VM+V LLV+PYG+FGT EIRRV
Sbjct:   17 FVLIFKATQTVNFAQGALAATGALFVCFLVTDGHIPFTSISNPVNSLGGPDWV--RWFLNVAVALAFAAAVGLVVERLAIRPMIGEPLFSVAVITLGLEIMFRVFNNDAVEVEFRPLGIPWAADGFTGGGAFINWSFIAVMITAAAAFAAVFLFFRSRLGIAMRAVAFDQEAAMAQGVSVGRVFAIAWAAGAVLAAVGGIFATQPPVAQTLSVDQETANI-AFRALPAVILGGLDSTSGALLGGLLVGVAEIYAGQYAHGNVSWLGAGYPLIVPYVVMIVGLLVRPYGMFGTPEIRRV 311          
BLAST of mRNA_M-pyrifera_M_contig79068.18569.1 vs. uniprot
Match: A0A6B0WKM4_9ACTN (Branched-chain amino acid ABC transporter permease n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WKM4_9ACTN)

HSP 1 Score: 290 bits (743), Expect = 1.510e-93
Identity = 160/312 (51.28%), Postives = 216/312 (69.23%), Query Frame = 1
Query:    1 FVLVFKASQVLNFATGGIAMAGAIFMSILIADRG--------------FPFLPFTNPLAPAAGETASVPLWMLHVVIAMLFAALLAVVLERVAIRPLVGQPLFALAVVTLGIEVALGPFNRDATAISSRSLGVPWKTNSWEIWGAIIPKSFLAAVIAAILAFAAVLMFYRSRMGVAMRAVAFDQEAAMAQGINVGRVFSISWALGGSIAALGAIMFGMAPFPPSGAVSQEVHPVLAFRVLPVIILGGLDSVMGALYGGLIIASFEIFAGEYLSGYNSILGPGYSTIVPYIVMLVVLLVKPYGLFGTAEIRRV 894
            FVL+FKA+Q +NFA G +A  GA+F++ L+  R                PF   +NPL    G       W L V++A+ FAA++ +V+ER+AIRP++G+PLF++AV+TLG+E+    FN DA  I  R +GVPW+ + +++ GA+I  SF+AA++AA +AF +V  FYRSR+G+AMRAVAFDQEAAMAQGINVGRVF+I+WA G  +AA+G I     P   + +V Q    + AFR LP +ILGGLDSV GAL GGLI+   EI+AG+Y +G+ S LG GY  IVPY+VM++ LLV+PYGLFGT EI RV
Sbjct:   66 FVLIFKATQTVNFAQGALAATGALFLAFLVQKRSVFSEGESVVERDGHIPFTNISNPLDSLGGPQWVH--WSLSVIVALAFAAVVGLVVERLAIRPMIGEPLFSVAVITLGLEIMFRVFNNDAVEIELRPIGVPWEISGFKVGGALINWSFVAAMVAAAVAFISVYFFYRSRLGIAMRAVAFDQEAAMAQGINVGRVFAIAWAAGAVLAAVGGIFATQPPVEQTISVDQGTANI-AFRALPAVILGGLDSVTGALLGGLIVGLAEIYAGQYAAGHTSWLGAGYPLIVPYVVMIIGLLVRPYGLFGTPEIERV 374          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79068.18569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8GHJ0_9ACTN5.960e-14368.79Branched-chain amino acid ABC transporter permease... [more]
A0A7Y1UT72_9ACTN1.420e-12865.22Branched-chain amino acid ABC transporter permease... [more]
A0A3M2H0P1_ACTSX1.420e-9853.69Branched-chain amino acid ABC transporter permease... [more]
A0A7Y2ID16_9ACTN3.540e-9863.33Branched-chain amino acid ABC transporter permease... [more]
A0A6B0ZGJ1_9ACTN6.670e-9854.70Branched-chain amino acid ABC transporter permease... [more]
A0A2E0SY80_9ACTN4.360e-9653.02Branched-chain amino acid ABC transporter permease... [more]
A0A6N2DU66_9ACTN2.820e-9552.68Branched-chain amino acid ABC transporter permease... [more]
A0A848UKN6_9ACTN7.770e-9551.99Branched-chain amino acid ABC transporter permease... [more]
A0A7K2BR69_9ACTN1.160e-9352.35Branched-chain amino acid ABC transporter permease... [more]
A0A6B0WKM4_9ACTN1.510e-9351.28Branched-chain amino acid ABC transporter permease... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79068contigM-pyrifera_M_contig79068:77..973 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score192.2
Seed ortholog evalue3.5e-46
Seed eggNOG ortholog1463825.JNXC01000023_gene4961
Preferred namelivH
KEGG koko:K01997
KEGG TC3.A.1.4
KEGG Pathwayko02010,ko02024,map02010,map02024
KEGG ModuleM00237
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.Branched-chain amino acid transport system / permease component
EggNOG OGs2HDZ9@201174,4DZD5@85010,COG0559@1,COG0559@2
COG Functional cat.U
Best tax levelPseudonocardiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02000
Exons1
Model size897
Cds size897
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816693.709767-CDS-M-pyrifera_M_contig79068:76..9731622816693.709767-CDS-M-pyrifera_M_contig79068:76..973Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79068 77..973 -
1692278123.650514-CDS-M-pyrifera_M_contig79068:76..9731692278123.650514-CDS-M-pyrifera_M_contig79068:76..973Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79068 77..973 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79068.18569.1prot_M-pyrifera_M_contig79068.18569.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79068 77..973 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79068.18569.1

>prot_M-pyrifera_M_contig79068.18569.1 ID=prot_M-pyrifera_M_contig79068.18569.1|Name=mRNA_M-pyrifera_M_contig79068.18569.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=299bp
FVLVFKASQVLNFATGGIAMAGAIFMSILIADRGFPFLPFTNPLAPAAGE
TASVPLWMLHVVIAMLFAALLAVVLERVAIRPLVGQPLFALAVVTLGIEV
ALGPFNRDATAISSRSLGVPWKTNSWEIWGAIIPKSFLAAVIAAILAFAA
VLMFYRSRMGVAMRAVAFDQEAAMAQGINVGRVFSISWALGGSIAALGAI
MFGMAPFPPSGAVSQEVHPVLAFRVLPVIILGGLDSVMGALYGGLIIASF
EIFAGEYLSGYNSILGPGYSTIVPYIVMLVVLLVKPYGLFGTAEIRRV*
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mRNA from alignment at M-pyrifera_M_contig79068:77..973-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79068.18569.1 ID=mRNA_M-pyrifera_M_contig79068.18569.1|Name=mRNA_M-pyrifera_M_contig79068.18569.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=897bp|location=Sequence derived from alignment at M-pyrifera_M_contig79068:77..973- (Macrocystis pyrifera P11B4 male)
TTCGTCTTGGTCTTCAAGGCCAGCCAGGTCCTGAACTTCGCCACCGGCGG CATTGCGATGGCCGGTGCCATCTTCATGTCGATCCTGATCGCCGATCGGG GCTTTCCCTTCCTGCCGTTCACCAACCCGCTGGCGCCGGCTGCGGGCGAA ACGGCGAGCGTGCCGCTGTGGATGCTCCATGTGGTGATCGCGATGTTGTT CGCCGCACTGCTGGCCGTGGTGCTCGAACGAGTCGCCATCCGGCCGCTGG TCGGTCAGCCACTGTTTGCTCTGGCGGTCGTCACGCTCGGTATCGAAGTG GCCCTCGGGCCGTTCAACCGAGATGCAACAGCCATCAGCTCGAGAAGCCT CGGTGTGCCGTGGAAGACCAACTCCTGGGAGATCTGGGGTGCCATCATCC CCAAGAGCTTTCTCGCTGCGGTGATCGCCGCAATCCTGGCCTTCGCAGCG GTCCTCATGTTCTATCGATCGAGGATGGGCGTCGCCATGCGTGCGGTCGC CTTCGATCAAGAGGCCGCAATGGCTCAAGGCATCAACGTCGGTCGAGTCT TCTCGATCTCGTGGGCGCTCGGCGGTTCGATCGCTGCACTCGGGGCGATC ATGTTCGGCATGGCGCCGTTCCCACCATCGGGAGCCGTCAGTCAGGAAGT GCATCCGGTGCTCGCCTTCCGAGTGCTGCCGGTCATCATTCTCGGTGGTC TCGACTCGGTCATGGGTGCCCTCTATGGCGGACTCATCATCGCCTCGTTC GAGATCTTCGCCGGTGAATATCTCTCTGGCTACAACAGCATTCTCGGCCC TGGCTACTCGACCATCGTTCCCTACATCGTGATGCTGGTCGTGCTGCTCG TGAAGCCCTATGGCCTCTTCGGAACTGCAGAAATCAGGAGAGTCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79068:77..973-

>mRNA_M-pyrifera_M_contig79068.18569.1 ID=mRNA_M-pyrifera_M_contig79068.18569.1|Name=mRNA_M-pyrifera_M_contig79068.18569.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1794bp|location=Sequence derived from alignment at M-pyrifera_M_contig79068:77..973- (Macrocystis pyrifera P11B4 male)
TTCGTCTTGGTCTTCAAGGCCAGCCAGGTCCTGAACTTCGCCACCGGCGG
CATTGCGATGGCCGGTGCCATCTTCATGTCGATCCTGATCGCCGATCGGG
GCTTTCCCTTCCTGCCGTTCACCAACCCGCTGGCGCCGGCTGCGGGCGAA
ACGGCGAGCGTGCCGCTGTGGATGCTCCATGTGGTGATCGCGATGTTGTT
CGCCGCACTGCTGGCCGTGGTGCTCGAACGAGTCGCCATCCGGCCGCTGG
TCGGTCAGCCACTGTTTGCTCTGGCGGTCGTCACGCTCGGTATCGAAGTG
GCCCTCGGGCCGTTCAACCGAGATGCAACAGCCATCAGCTCGAGAAGCCT
CGGTGTGCCGTGGAAGACCAACTCCTGGGAGATCTGGGGTGCCATCATCC
CCAAGAGCTTTCTCGCTGCGGTGATCGCCGCAATCCTGGCCTTCGCAGCG
GTCCTCATGTTCTATCGATCGAGGATGGGCGTCGCCATGCGTGCGGTCGC
CTTCGATCAAGAGGCCGCAATGGCTCAAGGCATCAACGTCGGTCGAGTCT
TCTCGATCTCGTGGGCGCTCGGCGGTTCGATCGCTGCACTCGGGGCGATC
ATGTTCGGCATGGCGCCGTTCCCACCATCGGGAGCCGTCAGTCAGGAAGT
GCATCCGGTGCTCGCCTTCCGAGTGCTGCCGGTCATCATTCTCGGTGGTC
TCGACTCGGTCATGGGTGCCCTCTATGGCGGACTCATCATCGCCTCGTTC
GAGATCTTCGCCGGTGAATATCTCTCTGGCTACAACAGCATTCTCGGCCC
TGGCTACTCGACCATCGTTCCCTACATCGTGATGCTGGTCGTGCTGCTCG
TGAAGCCCTATGGCCTCTTCGGAACTGCAGAAATCAGGAGAGTCTGATTC
GTCTTGGTCTTCAAGGCCAGCCAGGTCCTGAACTTCGCCACCGGCGGCAT
TGCGATGGCCGGTGCCATCTTCATGTCGATCCTGATCGCCGATCGGGGCT
TTCCCTTCCTGCCGTTCACCAACCCGCTGGCGCCGGCTGCGGGCGAAACG
GCGAGCGTGCCGCTGTGGATGCTCCATGTGGTGATCGCGATGTTGTTCGC
CGCACTGCTGGCCGTGGTGCTCGAACGAGTCGCCATCCGGCCGCTGGTCG
GTCAGCCACTGTTTGCTCTGGCGGTCGTCACGCTCGGTATCGAAGTGGCC
CTCGGGCCGTTCAACCGAGATGCAACAGCCATCAGCTCGAGAAGCCTCGG
TGTGCCGTGGAAGACCAACTCCTGGGAGATCTGGGGTGCCATCATCCCCA
AGAGCTTTCTCGCTGCGGTGATCGCCGCAATCCTGGCCTTCGCAGCGGTC
CTCATGTTCTATCGATCGAGGATGGGCGTCGCCATGCGTGCGGTCGCCTT
CGATCAAGAGGCCGCAATGGCTCAAGGCATCAACGTCGGTCGAGTCTTCT
CGATCTCGTGGGCGCTCGGCGGTTCGATCGCTGCACTCGGGGCGATCATG
TTCGGCATGGCGCCGTTCCCACCATCGGGAGCCGTCAGTCAGGAAGTGCA
TCCGGTGCTCGCCTTCCGAGTGCTGCCGGTCATCATTCTCGGTGGTCTCG
ACTCGGTCATGGGTGCCCTCTATGGCGGACTCATCATCGCCTCGTTCGAG
ATCTTCGCCGGTGAATATCTCTCTGGCTACAACAGCATTCTCGGCCCTGG
CTACTCGACCATCGTTCCCTACATCGTGATGCTGGTCGTGCTGCTCGTGA
AGCCCTATGGCCTCTTCGGAACTGCAGAAATCAGGAGAGTCTGA
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