mRNA_M-pyrifera_M_contig78959.18550.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: UPI001AC75C95 (Uncharacterized protein n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=UPI001AC75C95) HSP 1 Score: 98.2 bits (243), Expect = 3.950e-19 Identity = 95/314 (30.25%), Postives = 138/314 (43.95%), Query Frame = 1 Query: 1 PRGSNQRLDGSSYADDVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAW---DPRALELGYGYDREALANQQLPASEGMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQ---YLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNALDRGSLDASVVEL 924 PR ++R+ G + ++ + G RV + + Y IEA GA GGVGG+ + G +W PG L L G+ GGG VD G G+ +KA RL+R ++ Y A G F A + W DP L A + +E W G+ + YD + DG++ V + A R +T + + +A G GGY+ L G VQ F GP + AE +GAAGGG V G + Q + V VDL + L + G++ AL G+LDA+ +EL Sbjct: 217 PRSGSKRMSGGALDSEIVIVGTRVERAIDDHAYWGIEAAGAAGGGVGGYAEYLGTIGTETTVW----PGVLTLGGRLALGMGGGGDVDTGGGMLMKAGAYGTVRLSRELGLTLEGGYTKAPQGSFRAVHAAASLNWILDDPSDLT----------APPRNTRTE-----WVGGI--ERYDAQRR---------DGSRRPLQAVTLKANRFVTPHLYLTGQAHSAAGGGAGGYTAGLVGAGVQAKVF---GPVHVGAEALIGAAGGGGVSTEGGAIAQPSAYVGVDLGRSLALRMSAGKIKALRGGALDATTLEL 497
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: UPI001CE11E04 (hypothetical protein n=1 Tax=Sphingobacterium sp. WQ 366 TaxID=2781959 RepID=UPI001CE11E04) HSP 1 Score: 84.0 bits (206), Expect = 2.810e-14 Identity = 74/277 (26.71%), Postives = 129/277 (46.57%), Query Frame = 1 Query: 64 LRVGLE--VSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLPASEGMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQYLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNAL 888 + VGL+ +++ Y ++ GAV+GG+ G+ + + G G L++S+ W+ +++ G +GGG V G G ++A +GLR L + A + + + DGDF+ L+LGV+ +A + + L + L ++ ++ L + Y K G +D L+G + + + + F +G G Y+E L GV + + + A GAAGGG + GSGLV+Q G+ L + GIG+M L Sbjct: 243 IGVGLDQFFTKNWYATLKLHGAVSGGIDGYMSYLVGLGYEDKLFKSSTT----WDAQIVAGPSGGGDVATGGGSIVQANIGLRKNLGNSINAKLALGHTWSPDGDFSGTFLELGVS---KAFQFLIPKKTQRLYS--LSNNDYQRHIFDITLLNRVYFSTDRLDKNGY-PYDEAFNLLGFKFSKRIRNGLEAIGATFWAYQGSYGAYAEGLLGVGYNKQLINE--DWTVKAHLLFGAAGGGGINLGSGLVYQYQLGLERSLGGNWGIQSGIGQMRGL 507
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: A0A101JQG9_CHLLI (Uncharacterized protein n=1 Tax=Chlorobium limicola TaxID=1092 RepID=A0A101JQG9_CHLLI) HSP 1 Score: 77.0 bits (188), Expect = 5.580e-12 Identity = 84/311 (27.01%), Postives = 134/311 (43.09%), Query Frame = 1 Query: 10 SNQRLDGSSYADDVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLPASEGMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQYLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNALDRGSLDASVVELGGAVDV 942 S+ D S DD+ L G+ ++ Y +E GA +G G+ ++ G G R P+ + +V + G G VD GSGL A GL+ + N A + Y + G F A + L + + E+G G+++++ + S+ D +F + + Y +A + + + + + L G+ + L + + + +G G Y L G G +G L AE GAAGGG + GSGLV Q G+ DL V + GRM A D G A+V+ L A V Sbjct: 211 SSAHTDSGSDQDDLTLLGIEWRTYFDDNWYAKLETEGAASGNSTGYMQILTGAGFRLPVTDRLYACA---DVAIGGXXXXG--VDTGSGLMFDAAAGLQLFMTDNLFAELSGGYLSSATGSFDAGSIALKLGY-----EVGGGHEKQSHGVSEQGVSD---DYMRFRIVNQTY-FKADERWRSHHNDEDVENL-GVQVDYFLDRNWYLTGQGLAAYDGGAGAYMTGLIGT---GFRKQLVGGLYLNAEVLAGAAGGGGLAMGSGLVWQGNAGLGYDLGSSVSALVTAGRMEAFD-GDFKANVLGLSLAYHV 502
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: A0A2E1U4W8_9BACT (Uncharacterized protein n=1 Tax=Kiritimatiellaceae bacterium TaxID=2026752 RepID=A0A2E1U4W8_9BACT) HSP 1 Score: 74.3 bits (181), Expect = 4.190e-11 Identity = 82/300 (27.33%), Postives = 125/300 (41.67%), Query Frame = 1 Query: 34 SYADDVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLPASEGMLDVWQFGLTTKAYDMRASAKKQGGGDF---DGTQYLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNALDRGSLDASVVEL 924 S D L G+ V+ Y +E GA G G+ ++ G G E L Q+ +E G AGGG V G G+ + GLR + ++ + Y A DG+ + + A ++GY E + AS G L F T Y + K++ D VG+ + TE + I + F G+ G Y L G+ Q A + + AE VGAAGGG ++ GSGLV Q G+ + L + + +GR+ A++ G DA ++ L Sbjct: 193 SEQKDFSLVGIEARAHVANGWYAKLETEGAAQGESTGYMQILGGGGR-----EVLLAPQVILFIEAGIGGAGGGSVSTGGGVLIDGAAGLRWCVFDDYYIGISGGYLHAPDGELSGYTV---------ACKIGYTVQYE----DEFEASPGSLKAEPFKKTRIRYSYQHYEKRKENWRSHHPDENVGNVGVQLDTFFTEQLYISGQGFAAANGNAGAYMIGLLGIGFQQAIHQ---AWFVSAECLVGAAGGGGLQMGSGLVAQWNAGIGIKLSETIGFQGYVGRLKAVE-GQFDADIIGL 470
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: A0A7C1ZIK6_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1ZIK6_9GAMM) HSP 1 Score: 73.6 bits (179), Expect = 7.870e-11 Identity = 73/302 (24.17%), Postives = 130/302 (43.05%), Query Frame = 1 Query: 46 DVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLPASEGMLDV----WQFGLTTKAYDMRASAKKQGGGDFDGTQY-LVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNALDRGSLDASVVELGGAV 936 D+ L G+ ++T++ ++A GA+ G G+ +++ G G ++ LPGQ + ++ + G +GGG VD G G + L+ R + + +A DGDF A L + + R + + G L++ W+ T + Y + +++ D L G+ A+ + ++ + +A G +G GGY+ L G + P L AE GAAGGG + G GLV Q G+ L G +++ G+ +A+V+ L A+ Sbjct: 216 DMSLVGVEWDTYFHKNTFLRLQALGAMRGNSDGYASILLGLG-----YDYQLPGQNNLKLAVSLGASGGGNVDTGGGFIADTSLNLQHRFNNGLLLGLKAGFQNAPDGDFEATSLGIYIGHSDRPPK---------------KPNPGGLNIKPRHWRIRATHQTYLPKGDTRRKSQTTPDNRNINLFGLQADIMVNRNIYLTGQAIGAYDGGAGGYAAGLIGTGII-FPLHKKNRLVLNAEVLAGAAGGGGLAIGDGLVTQAMIGIGYRTSRSTSLRASYGMFKSIN-GTFEANVINLSFAL 495
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: A0A7X9GYP4_9BACT (Uncharacterized protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7X9GYP4_9BACT) HSP 1 Score: 73.6 bits (179), Expect = 8.140e-11 Identity = 67/278 (24.10%), Postives = 121/278 (43.53%), Query Frame = 1 Query: 46 DVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLPASEGMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQYLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRM 879 D+ L G+ + Y ++ GA+AGG+ G+ + + G G PL +L + +L+ G +GGG V L+ VGL RL + + G L++ ++ + + + A +L SE L ++ F L + Y + + G +D L+G + + + +L +G G Y+E L G+R + + + +EL A+ GAAGGG ++ GSGLV+ + G+ + L + +G+M Sbjct: 235 DISLVGVELDHFFHAQWYAALKLHGAMAGGIDGYMSYLVGVGFEQPLAGD----RLTLDAQLLAGPSGGGGVAXXXXGTLQGTVGLSTRLGEAYGIKAAIGHTFTPGGQLNGTLLEMALSHNFHFYTTAGAHTKTAY---RLKESE-RLRMFGFELLNRTYWSSSERMDKNGRPYDKAFNLMGFVVSKRIHDHFDLLGATNWAYQGSYGAYAEGLLGLRYR---YGWNPSWELRAQALGGAAGGGGIDLGSGLVYHYSAGLVRHISQNWRLAVSVGQM 501
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: UPI0019ACBFBA (Uncharacterized protein n=1 Tax=Caulobacter sp. TaxID=78 RepID=UPI0019ACBFBA) HSP 1 Score: 73.2 bits (178), Expect = 9.150e-11 Identity = 89/302 (29.47%), Postives = 128/302 (42.38%), Query Frame = 1 Query: 28 GSSYADDVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAW--DPRALELGYGYDREALANQQLPASEGMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQYL--VGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNALDRGSLDASVVE 921 G+ + L GLR V + IE GA +GGV G+ ++A GLR P+ ++ +L V G+AGGG +D G GL +KA G RL DA G + A + + W D A + G D A ++ +FG + Y +A+K G TQ L V + R +T ++ + +A G G YS L GV GA L E GAAGGG V+ G + Q V L D + L + G++ ++ G LDA VV+ Sbjct: 144 GAPLTQRIGLVGLRAERSVDGPLWAGIETAGAGSGGVAGYAEVLATAGLRWPVVDN----RLSLGVGAAVGLAGGGGIDTGGGLLVKAAAGGTLRLTGTLGVGAELGVVDAPRGHYKAGTAAVSLNWSLDAPAADPGSWSDIRPGAPTRM----------EFGAGVERY---RAARKDGR-----TQPLEAVVLQVNRFVTPNLYVTGQAHSAFAGGAGAYSVGLFGV---GAQLPVTPGLRLGVEALGGAAGGGGVDTQGGALMQGRAYADVALTDALSLRVAGGKIKSV-HGGLDAPVVD 419
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: A0A2M7WQH4_9PROT (Uncharacterized protein n=1 Tax=Zetaproteobacteria bacterium CG_4_9_14_3_um_filter_53_7 TaxID=1974119 RepID=A0A2M7WQH4_9PROT) HSP 1 Score: 72.4 bits (176), Expect = 1.910e-10 Identity = 80/306 (26.14%), Postives = 132/306 (43.14%), Query Frame = 1 Query: 28 GSSYADDVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDW-EVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLPASE-GMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQYLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNALDRGSLDASVVELGGAVD 939 G ++L G+ + ++ ++ IE+ GA+ G G+ ++ G G R L + + W ++ GVAGGG V G GL + A+ ++ RL+ + A V Y + F A L A +LGY + + ++ + S+ D F + +A + L+G+ + E++ + + +G G Y L G + F+ P + AE VGAAGGG + GSGLV Q G+ LFD L G M+A+ +G+ A V+ L A D Sbjct: 212 GQPQHKSIQLMGIEWNNYLDDNVFLKIESEGAMGGKSNGYMQILFGMGYRFELIDGST-----WVKLSSSAGVAGGGDVATGGGLIVDAVASVQQRLSDHLFAEVSAGYVRVPETTFKAISL---------AGKLGYHFYTPDVRDESVALSDLAGFDTSYFRIRATHQSYYKAAANWRSHHANLNVDLLGLQIDYFPHENIYLTGQGIAAYKGQAGAYMTGLVGAGLHMPLFNT--PLFVDAEALVGAAGGGGLAVGSGLVWQANAGLGYQLFDDFSLLAQYGYMSAI-KGNFKAKVMTLSFAYD 500
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: A0A1F3GXT2_9BACT (Uncharacterized protein n=3 Tax=Bacteroidetes TaxID=976 RepID=A0A1F3GXT2_9BACT) HSP 1 Score: 72.4 bits (176), Expect = 1.950e-10 Identity = 68/278 (24.46%), Postives = 119/278 (42.81%), Query Frame = 1 Query: 46 DVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLPASEGMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQYLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRM 879 D+ L G+ + Y ++ GAVAGG+ G+ + + G G L +L + +L+ G +GGG + ++ VGLRA L + G+F L+LG++ + + G DR+ + L + F L + Y + + G +D + L+G+ + IL + +G G Y+E L G+ G + ++ A+ GAAGGG ++ G+GLV Q + G+A + +G G+M Sbjct: 231 DIYLVGIELDHFFHHKWYAALKLHGAVAGGIDGYMSYLVGLGFEQALGTD----RLTLDTQLLAGPSGGGGIASXXXXXIQGSVGLRALLGNAYGIKAAIGQTITPGGEFNGTLLELGLSKNFQFASTGG--DRQRTVYRLKDTDR--LHEFGFELQNRTYYPSTKSTDKNGRPYDRSFNLMGLVVSKKFHHHFDILGATYWAYQGSYGAYAEGLLGL---GYRYARTPSWKFRAQVLGGAAGGGGIDTGNGLVFQYSAGLAHQINQNWGFSIGAGQM 497
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: A0A7Y0C559_9BURK (Uncharacterized protein n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=A0A7Y0C559_9BURK) HSP 1 Score: 71.2 bits (173), Expect = 4.700e-10 Identity = 76/299 (25.42%), Postives = 126/299 (42.14%), Query Frame = 1 Query: 25 DGSSYADDVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLP-ASEGMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQYLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNALDRGSLDASVV 918 DG ++L G+ + + ++ +E+ GA+ G G+ ++AG G R PL S ++ G AGGG+VD G GL L A + L+ L + A F A+ + AL+L Y + A+ + +P + G D + ++ GD D + +G+ + ++ + + + G G G Y L G+ G + + + E GAAGGG + G GLV Q+ GV L + + +GR+ AL RG A+VV Sbjct: 228 DGQPQHRSMQLLGVEWLSYIDDRWFLKLESEGAMGGQSNGYMQILAGGGYRLPLTRSTA-----LKLHAAAGPAGGGRVDTGGGLLLDAGIALQQNLTPRTAVELSVGEVRAPSRSFKASSV---------ALKLNYRFGLPAVTSAAVPWETLGGFDAEPLRVRVVNQTYFKASPNWRNGDVDRSVSNLGVQLDYFVSPHLFLTGQGLGAYAGKAGAYMTGLVGL---GGQWPVSERWFVEGEALAGAAGGGGLAVGGGLVGQVNAGVGYRLSKSLSVMTTVGRIEAL-RGDFKANVV 508 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78959.18550.1 >prot_M-pyrifera_M_contig78959.18550.1 ID=prot_M-pyrifera_M_contig78959.18550.1|Name=mRNA_M-pyrifera_M_contig78959.18550.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=322bp PRGSNQRLDGSSYADDVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRback to top mRNA from alignment at M-pyrifera_M_contig78959:11..976- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78959.18550.1 ID=mRNA_M-pyrifera_M_contig78959.18550.1|Name=mRNA_M-pyrifera_M_contig78959.18550.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=966bp|location=Sequence derived from alignment at M-pyrifera_M_contig78959:11..976- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78959:11..976- >mRNA_M-pyrifera_M_contig78959.18550.1 ID=mRNA_M-pyrifera_M_contig78959.18550.1|Name=mRNA_M-pyrifera_M_contig78959.18550.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1932bp|location=Sequence derived from alignment at M-pyrifera_M_contig78959:11..976- (Macrocystis pyrifera P11B4 male)back to top |