mRNA_M-pyrifera_M_contig78916.18538.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78916.18538.1 vs. uniprot
Match: A0A0H2R6K7_9AGAM (SET domain-containing protein n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2R6K7_9AGAM) HSP 1 Score: 62.0 bits (149), Expect = 5.380e-8 Identity = 33/93 (35.48%), Postives = 49/93 (52.69%), Query Frame = 1 Query: 217 GHGVYLAPALFNHSCAPNVRLRTNAAGPLLLFEAAQAVAKGQPLTLSYLDNGLLVDDSAAPRLSARRDCALRRKELMESFRFHCACARCLEDE 495 GH +Y+AP+L NHSC PN R G ++ Q + KG+ +T+SY+D + D+ RR LM S+RF+C+C C D+ Sbjct: 557 GHALYVAPSLMNHSCMPNARREF--IGTAIVIRTIQDLKKGEEVTVSYIDAQVSYDE--------------RRFRLMNSWRFNCSCGVCEADD 633
BLAST of mRNA_M-pyrifera_M_contig78916.18538.1 vs. uniprot
Match: A0A813L9Q5_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813L9Q5_POLGL) HSP 1 Score: 60.5 bits (145), Expect = 1.500e-7 Identity = 42/132 (31.82%), Postives = 61/132 (46.21%), Query Frame = 1 Query: 94 RSLQAYFRHL--EVTDGDLLLEMLCRNRRNGFCFGNGVHEEPQGHGVYLAPALFNHSCAPNVRLRTNAAGPLLLFEAAQAVAKGQPLTLSYLDNGLLVDDSAAPRLSARRDCALRRKELMESFRFHCACARC 483 R+ QA R L ++ D D L +L N F F +EP G+ Y P+ +HSC P+ A + A +A+A G +T+SYL+ LL+ RR +L E+ +F CAC RC Sbjct: 130 RATQAIARQLVPQLRDVDKLERLLQAWIHNAFDFS----DEPSGYATYYFPSFMSHSCYPSAFWHYGADAERYVLRARRAIAAGDEVTVSYLEETLLLSHVQE-----------RRWDLFETKQFWCACERC 246
BLAST of mRNA_M-pyrifera_M_contig78916.18538.1 vs. uniprot
Match: A0A2C6L766_9APIC (Histone lysine set n=1 Tax=Cystoisospora suis TaxID=483139 RepID=A0A2C6L766_9APIC) HSP 1 Score: 58.9 bits (141), Expect = 6.400e-7 Identity = 41/122 (33.61%), Postives = 58/122 (47.54%), Query Frame = 1 Query: 118 HLEVTDGDLLLEMLCRNRRNGFCFGNGVHEEPQGHGVYLAPALFNHSCAPNVRLRTNAAGPLLLFEAAQAVAKGQPLTLSYLDNGLLVDDSAAPRLSARRDCALRRKELMESFRFHCACARC 483 H V D +L+L++ N CF H++P G+ +Y P+ +HSC PN T+ +L A + KG +TLSYL L+ R RRK L+E+ F CAC RC Sbjct: 162 HTTVQDLELMLQIWIHN-----CFEQ--HDDPIGYVIYFMPSFSSHSCLPNTLWFTDEKDRFVLRSRAH-LKKGDEVTLSYLSEEDLM-----------RPAKERRKVLLETKDFFCACERC 264
BLAST of mRNA_M-pyrifera_M_contig78916.18538.1 vs. uniprot
Match: A0A383W211_TETOB (SET domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W211_TETOB) HSP 1 Score: 56.6 bits (135), Expect = 3.820e-6 Identity = 36/90 (40.00%), Postives = 49/90 (54.44%), Query Frame = 1 Query: 217 GH-GVYLAPALFNHSCAPNVRLRTNAAGPLLLFEAAQAVAKGQPLTLSYLDNGLLVDDSAAPRLSARRDCALRRKELMESFRFHCACARC 483 GH GV+ A A+ NH+C PN G L+ AA+ +A GQ +TLSYL P+L A A+R++EL + + F C CARC Sbjct: 533 GHLGVWPAAAMINHACCPNAHALL--IGDRLVVRAAEDIAAGQQVTLSYL----------GPQLFA--PAAVRQEELRQQWGFDCGCARC 608
BLAST of mRNA_M-pyrifera_M_contig78916.18538.1 vs. uniprot
Match: A0A0H2R7W9_9AGAM (SET domain-containing protein n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2R7W9_9AGAM) HSP 1 Score: 56.2 bits (134), Expect = 5.130e-6 Identity = 33/97 (34.02%), Postives = 47/97 (48.45%), Query Frame = 1 Query: 205 EEPQGHGVYLAPALFNHSCAPNVRLRTNAAGPLLLFEAAQAVAKGQPLTLSYLDNGLLVDDSAAPRLSARRDCALRRKELMESFRFHCACARCLEDE 495 E G+Y+AP+L NHSCAP R G A Q + KG+ LTL+Y++ + D+ RR +M+S+RF C C C D+ Sbjct: 492 ESDSWKGLYVAPSLLNHSCAPTARREF--IGNAFALRAIQDMKKGEELTLTYIEPHVSYDE--------------RRFRMMKSWRFSCECIVCQADD 572
BLAST of mRNA_M-pyrifera_M_contig78916.18538.1 vs. uniprot
Match: E1ZCG6_CHLVA (SET domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZCG6_CHLVA) HSP 1 Score: 55.8 bits (133), Expect = 5.800e-6 Identity = 31/95 (32.63%), Postives = 48/95 (50.53%), Query Frame = 1 Query: 217 GHGVYLAPALFNHSCAPNVRLRTNAAGPLLLFEAAQAVAKGQPLTLSYLDNGLLVDDSAAPRLSARRDCALRRKELMESFRFHCACARCLEDEVA 501 G YL +L NHSC P++ + + F AA+ +A+G+ LT+SY+D G + A RR+ L ++ F C C RC+E+ A Sbjct: 300 GSAAYLLASLLNHSCEPSLGVSFPRNNAVAAFTAARHIARGEQLTVSYVDAG--------------QGLAARRQALAWAYGFTCRCPRCVEEAAA 380
BLAST of mRNA_M-pyrifera_M_contig78916.18538.1 vs. uniprot
Match: A0A0G4FR69_VITBC (SET domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FR69_VITBC) HSP 1 Score: 54.7 bits (130), Expect = 1.610e-5 Identity = 34/110 (30.91%), Postives = 53/110 (48.18%), Query Frame = 1 Query: 181 FCFGNGVHEEPQGHGVYLAPALFNHSCAPNVRLRTNAAGPLLLFEAAQAVAKGQPLTLSYLDNGLLVDDSAAPRLSARRDCALRRKELMESF--RFHCACARCLEDEVAP 504 FC+ ++ + G++ + FNHSC+PNV + +LF + V KG+PLT+SY++ L + LRR L E+ RF C C +C+E P Sbjct: 234 FCYSKAGFDKMEAVGLFFLASFFNHSCSPNVCRYS--ISEWMLFHTIKPVKKGEPLTISYVEEEHLEEPLW-----------LRRAVLAENGYQRFKCVCPKCVEQRDDP 330
BLAST of mRNA_M-pyrifera_M_contig78916.18538.1 vs. uniprot
Match: A0A812LEA2_SYMMI (Pgl protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812LEA2_SYMMI) HSP 1 Score: 54.7 bits (130), Expect = 1.870e-5 Identity = 37/124 (29.84%), Postives = 58/124 (46.77%), Query Frame = 1 Query: 142 LLLEMLCRNRRNGFCFGNGVHEEPQGHGVYLAPALFNHSCAPNVRLRTNAA-GPL---------LLFEAAQAVAKGQPLTLSYLDNGLLVDDSAAPRLSARRDCALRRKELMESFRFHCACARC 483 L+LE+ C +G+ G++ A NHSCAPN +R +AA GP + F A + ++KG+ +T+SY++ GLL + R+ + S+ F CAC RC Sbjct: 636 LILEVCCSGLPSGWA------------GLFEYVAYVNHSCAPNAAIRASAASGPSRQESCCQYRIRFVALRPISKGEEITISYIEEGLLKQPVRS------------RQRYLRSWGFSCACVRC 735
BLAST of mRNA_M-pyrifera_M_contig78916.18538.1 vs. uniprot
Match: A0A1Q9CKV6_SYMMI (6-phosphogluconolactonase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CKV6_SYMMI) HSP 1 Score: 54.7 bits (130), Expect = 1.960e-5 Identity = 37/124 (29.84%), Postives = 58/124 (46.77%), Query Frame = 1 Query: 142 LLLEMLCRNRRNGFCFGNGVHEEPQGHGVYLAPALFNHSCAPNVRLRTNAA-GPL---------LLFEAAQAVAKGQPLTLSYLDNGLLVDDSAAPRLSARRDCALRRKELMESFRFHCACARC 483 L+LE+ C +G+ G++ A NHSCAPN +R +AA GP + F A + ++KG+ +T+SY++ GLL + R+ + S+ F CAC RC Sbjct: 3069 LILEVCCSGLPSGWA------------GLFEYVAYVNHSCAPNAAIRASAASGPSRQESCCQYRIRFVALRPISKGEEITISYIEEGLLKQPVRS------------RQRYLRSWGFSCACVRC 3168
BLAST of mRNA_M-pyrifera_M_contig78916.18538.1 vs. uniprot
Match: A0A553PDN0_TIGCA (MYND-type domain-containing protein (Fragment) n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PDN0_TIGCA) HSP 1 Score: 53.5 bits (127), Expect = 3.560e-5 Identity = 33/99 (33.33%), Postives = 53/99 (53.54%), Query Frame = 1 Query: 202 HEEPQGHGVYLAPALFNHSCAPNVRL----RTNAAGPLLLFEAAQAVAKGQPLTLSYLDNGLLVDDSAAPRLSARRDCALRRKELMESFRFHCACARCL 486 H +G G+YLAP++ +HSCAPN + RT L+ E+ K + +SY+D L++ S +R+K+L+E ++FHC C RC+ Sbjct: 132 HRSIKGWGLYLAPSILDHSCAPNATVSFLGRTIFVRTLVDMESP---LKWNEVRISYID---LMETSE-----------MRQKKLLEQYQFHCDCPRCV 213 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78916.18538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78916.18538.1 >prot_M-pyrifera_M_contig78916.18538.1 ID=prot_M-pyrifera_M_contig78916.18538.1|Name=mRNA_M-pyrifera_M_contig78916.18538.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp RFEDYLLLVARPEDFPEEEVASLRYWIIDYLRSLQAYFRHLEVTDGDLLLback to top mRNA from alignment at M-pyrifera_M_contig78916:19..684+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78916.18538.1 ID=mRNA_M-pyrifera_M_contig78916.18538.1|Name=mRNA_M-pyrifera_M_contig78916.18538.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig78916:19..684+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78916:19..684+ >mRNA_M-pyrifera_M_contig78916.18538.1 ID=mRNA_M-pyrifera_M_contig78916.18538.1|Name=mRNA_M-pyrifera_M_contig78916.18538.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig78916:19..684+ (Macrocystis pyrifera P11B4 male)back to top |