mRNA_M-pyrifera_M_contig78833.18519.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig78833.18519.1
Unique NamemRNA_M-pyrifera_M_contig78833.18519.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig78833.18519.1 vs. uniprot
Match: A0A2E7KCV9_9PLAN (Beta-Ig-H3/fasciclin n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KCV9_9PLAN)

HSP 1 Score: 463 bits (1191), Expect = 3.640e-162
Identity = 242/243 (99.59%), Postives = 243/243 (100.00%), Query Frame = 1
Query:    1 NGIIHVIDQVILPADKNLVETASAAGKFNTLLTAATKAGLAGVLSEKGPFTVFAPTDEAFAQLPEGTIESLLKPENKKKLADILKYHVVAGRVYSEDAVSAGEAKTLQGQKVKISVSGGVAKVNQAKILKTDIDASNGVIHVIDAVILPPEGKKVTAREACHQIRETVAQGAHLYNCGHYQQSAKLYRKTMQSMLQDVDGMPSDVSQQMYQALTSSKSMHCASQQAWTLRNALDHAYARMSAL 729
            NGIIHVIDQVILPADKNLVETASAAGKFNTLLTAATKAGLAGVLSEKGPFTVFAPTDEAFAQLPEGTIESLLKPENKKKLADILKYHVVAGRVYSEDAVSAGEAKTLQGQKVKISVSGGVAKVNQAKILKTDIDASNGVIHVIDAVILPPEGKKVTAREACHQIRETVAQGAHLYNCGHYQQSAKLYRKTMQSMLQDVDGMPSDVSQQM+QALTSSKSMHCASQQAWTLRNALDHAYARMSAL
Sbjct:  151 NGIIHVIDQVILPADKNLVETASAAGKFNTLLTAATKAGLAGVLSEKGPFTVFAPTDEAFAQLPEGTIESLLKPENKKKLADILKYHVVAGRVYSEDAVSAGEAKTLQGQKVKISVSGGVAKVNQAKILKTDIDASNGVIHVIDAVILPPEGKKVTAREACHQIRETVAQGAHLYNCGHYQQSAKLYRKTMQSMLQDVDGMPSDVSQQMHQALTSSKSMHCASQQAWTLRNALDHAYARMSAL 393          
BLAST of mRNA_M-pyrifera_M_contig78833.18519.1 vs. uniprot
Match: A0A518A396_9PLAN (Immunogenic protein MPT70 n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A396_9PLAN)

HSP 1 Score: 397 bits (1019), Expect = 5.140e-136
Identity = 205/243 (84.36%), Postives = 226/243 (93.00%), Query Frame = 1
Query:    1 NGIIHVIDQVILPADKNLVETASAAGKFNTLLTAATKAGLAGVLSEKGPFTVFAPTDEAFAQLPEGTIESLLKPENKKKLADILKYHVVAGRVYSEDAVSAGEAKTLQGQKVKISVSGGVAKVNQAKILKTDIDASNGVIHVIDAVILPPEGKKVTAREACHQIRETVAQGAHLYNCGHYQQSAKLYRKTMQSMLQDVDGMPSDVSQQMYQALTSSKSMHCASQQAWTLRNALDHAYARMSAL 729
            NGIIHVIDQVILPADKNLVETASAAG+F TLLTAAT+AGLA  LS KGPFTVFAPTD+AFAQLPEGT+ESLLKPENK+KLA ILKYHVVAGRVYSEDA++AGEAKTLQGQKVKIS +GGVAKVNQAKILKTDIDASNGVIHVIDAV++PP+ KK+TA EACH+IRE VAQGA LYNCGHY Q+AKLYRKTMQ++L  V+ MP++VS QM QAL+ SK+MHCASQQAWTLRNALDHAYARMSAL
Sbjct:  151 NGIIHVIDQVILPADKNLVETASAAGQFKTLLTAATEAGLAETLSNKGPFTVFAPTDKAFAQLPEGTLESLLKPENKQKLAAILKYHVVAGRVYSEDALAAGEAKTLQGQKVKISATGGVAKVNQAKILKTDIDASNGVIHVIDAVLMPPKDKKLTASEACHKIREAVAQGASLYNCGHYDQTAKLYRKTMQNVLTGVEDMPAEVSTQMRQALSHSKNMHCASQQAWTLRNALDHAYARMSAL 393          
BLAST of mRNA_M-pyrifera_M_contig78833.18519.1 vs. uniprot
Match: A0A518I9G2_9PLAN (Immunogenic protein MPT70 n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I9G2_9PLAN)

HSP 1 Score: 350 bits (899), Expect = 8.430e-118
Identity = 180/243 (74.07%), Postives = 209/243 (86.01%), Query Frame = 1
Query:    1 NGIIHVIDQVILPADKNLVETASAAGKFNTLLTAATKAGLAGVLSEKGPFTVFAPTDEAFAQLPEGTIESLLKPENKKKLADILKYHVVAGRVYSEDAVSAGEAKTLQGQKVKISVSGGVAKVNQAKILKTDIDASNGVIHVIDAVILPPEGKKVTAREACHQIRETVAQGAHLYNCGHYQQSAKLYRKTMQSMLQDVDGMPSDVSQQMYQALTSSKSMHCASQQAWTLRNALDHAYARMSAL 729
            NGIIHVID VILP+DKN+V TA  A KF TLL AAT AGLA VL+ KGPFTVFAPTDEAFA+LPEGT+ SLLKPENK+KLA ILKYHVVAGRVYSEDA++AG+AKTLQG+KVKIS S GVAKVN AK+L TDIDASNGVIH+ID VI+PP+GKK++A EAC +I+ TVA+GA+LYN GHY ++ KLY+KTMQ+ML  VD MP ++   M QALT S+ MHCASQQAWTLR+ALDHAY +MSAL
Sbjct:  151 NGIIHVIDSVILPSDKNIVVTALEAEKFKTLLAAATAAGLADVLANKGPFTVFAPTDEAFAKLPEGTVASLLKPENKEKLAAILKYHVVAGRVYSEDALAAGKAKTLQGKKVKISASNGVAKVNSAKLLATDIDASNGVIHIIDTVIMPPDGKKLSASEACEKIKHTVARGANLYNHGHYGETTKLYKKTMQTMLNSVDNMPEEIRVNMKQALTHSERMHCASQQAWTLRHALDHAYMQMSAL 393          
BLAST of mRNA_M-pyrifera_M_contig78833.18519.1 vs. uniprot
Match: A6CBF8_9PLAN (Uncharacterized protein n=11 Tax=Planctomycetaceae TaxID=126 RepID=A6CBF8_9PLAN)

HSP 1 Score: 323 bits (829), Expect = 3.430e-107
Identity = 168/243 (69.14%), Postives = 196/243 (80.66%), Query Frame = 1
Query:    1 NGIIHVIDQVILPADKNLVETASAAGKFNTLLTAATKAGLAGVLSEKGPFTVFAPTDEAFAQLPEGTIESLLKPENKKKLADILKYHVVAGRVYSEDAVSAGEAKTLQGQKVKISVSGGVAKVNQAKILKTDIDASNGVIHVIDAVILPPEGKKVTAREACHQIRETVAQGAHLYNCGHYQQSAKLYRKTMQSMLQDVDGMPSDVSQQMYQALTSSKSMHCASQQAWTLRNALDHAYARMSAL 729
            NGIIHVID VILP+DKN+V TA  A KF TL+ AA  AGLAGVLSE+GPFTVFAPTD+AFA+LPEGTI SLLKPENK KLA ILKYHVVAGRVYSEDA+ AG+AKTLQG+ V I V  GVAKVN AK+L TD+DASNGVIHVID VI+PPEGKK +A EA  +I+  VA+GA+LYNCG Y  + +LY+KTMQ +L+  D MP+ +   M  AL+ S+ M+C SQQAW LRNALDHAY  MS+L
Sbjct:  151 NGIIHVIDSVILPSDKNIVTTAVEAEKFKTLIAAAKAAGLAGVLSEQGPFTVFAPTDDAFAKLPEGTIASLLKPENKDKLAAILKYHVVAGRVYSEDALKAGKAKTLQGKPVMIKVVDGVAKVNNAKLLMTDLDASNGVIHVIDTVIMPPEGKKYSATEAREKIKHAVARGANLYNCGDYHATTQLYQKTMQDVLKSTDSMPATIRMNMKHALSESQQMNCVSQQAWRLRNALDHAYTEMSSL 393          
BLAST of mRNA_M-pyrifera_M_contig78833.18519.1 vs. uniprot
Match: A0A517W061_9PLAN (Immunogenic protein MPT70 n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W061_9PLAN)

HSP 1 Score: 320 bits (821), Expect = 5.590e-106
Identity = 166/243 (68.31%), Postives = 195/243 (80.25%), Query Frame = 1
Query:    1 NGIIHVIDQVILPADKNLVETASAAGKFNTLLTAATKAGLAGVLSEKGPFTVFAPTDEAFAQLPEGTIESLLKPENKKKLADILKYHVVAGRVYSEDAVSAGEAKTLQGQKVKISVSGGVAKVNQAKILKTDIDASNGVIHVIDAVILPPEGKKVTAREACHQIRETVAQGAHLYNCGHYQQSAKLYRKTMQSMLQDVDGMPSDVSQQMYQALTSSKSMHCASQQAWTLRNALDHAYARMSAL 729
            NGIIHVID VILP DKN+V TA+ AGKF TL+ AA  AGLA  LS KGP TVFAPTDEAFA+LPEGT+ SLLKPENK+KLADILKYHVV GRVYSEDA++A +AKTLQG  + I V+ G AKVN AK+L TDIDASNGVIHVID+VI+P + KK +A EA  +I+  VAQGA LYN GH+  SAKLY+KTM  +L+ VD MP ++  +M  AL++S  MHC +QQAWTLR+ALDHAY RMSAL
Sbjct:  151 NGIIHVIDSVILPTDKNIVVTAAEAGKFKTLIAAAKAAGLAEALSGKGPLTVFAPTDEAFAKLPEGTVASLLKPENKQKLADILKYHVVPGRVYSEDALAAKKAKTLQGNNINIGVADGTAKVNNAKLLATDIDASNGVIHVIDSVIMPSDAKKFSATEAREKIKHAVAQGARLYNSGHHDASAKLYKKTMHEVLKGVDQMPEEIRTRMKHALSNSSQMHCPTQQAWTLRHALDHAYTRMSAL 393          
BLAST of mRNA_M-pyrifera_M_contig78833.18519.1 vs. uniprot
Match: A0A518FMJ7_9PLAN (Immunogenic protein MPT70 n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FMJ7_9PLAN)

HSP 1 Score: 283 bits (725), Expect = 2.380e-93
Identity = 149/228 (65.35%), Postives = 173/228 (75.88%), Query Frame = 1
Query:   46 KNLVETASAAGKFNTLLTAATKAGLAGVLSEKGPFTVFAPTDEAFAQLPEGTIESLLKPENKKKLADILKYHVVAGRVYSEDAVSAGEAKTLQGQKVKISVSGGVAKVNQAKILKTDIDASNGVIHVIDAVILPPEGKKVTAREACHQIRETVAQGAHLYNCGHYQQSAKLYRKTMQSMLQDVDGMPSDVSQQMYQALTSSKSMHCASQQAWTLRNALDHAYARMSAL 729
            KN+VETA  AG F TL TA  +A L   L  KGPFTVFAPTD AF +LPEGT+++LLKPENK KLA IL YHVV G V + +      AKTL GQ+V I    G   V+ A ++K DI  SNG+IHVIDAV++PP+ KK+TA EACH+IRE VAQGA LYNCGHY Q+A LYRKTMQ++L  V+ MPS+VS QM QAL  SK+MHCASQQAWTLRNALDHAYARMSAL
Sbjct:   30 KNIVETAVEAGLFKTLATALKEAELVSALQGKGPFTVFAPTDAAFKKLPEGTLKTLLKPENKSKLAAILTYHVVPGNVTAAEVTQLSGAKTLNGQRVDIMTKDGKVMVDGATVVKADIKCSNGIIHVIDAVLMPPKEKKLTASEACHKIREAVAQGASLYNCGHYHQTATLYRKTMQNVLTGVEEMPSEVSTQMRQALAHSKNMHCASQQAWTLRNALDHAYARMSAL 257          
BLAST of mRNA_M-pyrifera_M_contig78833.18519.1 vs. uniprot
Match: A0A5Q4GYV7_9PLAN (Fasciclin domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A5Q4GYV7_9PLAN)

HSP 1 Score: 269 bits (687), Expect = 7.760e-86
Identity = 139/242 (57.44%), Postives = 182/242 (75.21%), Query Frame = 1
Query:    1 NGIIHVIDQVILPADKNLVETASAAGKFNTLLTAATKAGLAGVLSEKGPFTVFAPTDEAFAQLPEGTIESLLKPENKKKLADILKYHVVAGRVYSEDAVSAGEAKTLQGQKVKISVSGGVAKVNQAKILKTDIDASNGVIHVIDAVILPPEGKKVTAREACHQIRETVAQGAHLYNCGHYQQSAKLYRKTMQSMLQDVDGMPSDVSQQMYQALTSSKSMHCASQQAWTLRNALDHAYARMSA 726
            NGIIHVID VILPA  NLV  A  AG+F TLL AA  AGLA  L+  GPFTVFAPTD+AF++LPEGT+ESLLKPENK++LA+ILKYHV+AGRVYS+ AV   EA+TL GQ ++++V  GVAK+N AK+L TDIDASNGVIHVID+V+LP +  KV+A EA   I   +++GA L+N GH+ Q A++Y +T + ++   D MP+ V++ +   LT +   HCA+Q++WTLR+ LD AY  M +
Sbjct:  144 NGIIHVIDSVILPASDNLVAVAKKAGQFETLLAAAQAAGLADALAGGGPFTVFAPTDDAFSKLPEGTVESLLKPENKEQLANILKYHVIAGRVYSDAAVDGREARTLLGQNIRVTVGDGVAKINDAKLLTTDIDASNGVIHVIDSVLLPQD--KVSAHEARQMIEHAISRGARLFNAGHHHQCAEIYTETARKLVSYGDRMPTTVTRDLNVTLTQATHTHCATQRSWTLRHGLDRAYFAMQS 383          
BLAST of mRNA_M-pyrifera_M_contig78833.18519.1 vs. uniprot
Match: A0A0J1B8P7_RHOIS (Putative Sensory subunit of low CO2-induced protein complex n=2 Tax=Rhodopirellula TaxID=265488 RepID=A0A0J1B8P7_RHOIS)

HSP 1 Score: 263 bits (671), Expect = 1.900e-83
Identity = 142/242 (58.68%), Postives = 172/242 (71.07%), Query Frame = 1
Query:    1 NGIIHVIDQVILPADKNLVETASAAGKFNTLLTAATKAGLAGVLSEKGPFTVFAPTDEAFAQLPEGTIESLLKPENKKKLADILKYHVVAGRVYSEDAVSAGEAKTLQGQKVKISVSGGVAKVNQAKILKTDIDASNGVIHVIDAVILPPEGKKVTAREACHQIRETVAQGAHLYNCGHYQQSAKLYRKTMQSMLQDVDGMPSDVSQQMYQALTSSKSMHCASQQAWTLRNALDHAYARMSA 726
            NG+IH+ID VILPADK + ETA AAG F TLL AA  AGLA VL  +GPFTVFAPTDEAFA+LPEGT+ SLLKPENK+KL  ILKYHVVAGRVYSEDAV+A  AKTLQG  V I V+ G A +N +K++ TD+DASNGVIH+IDAV+LPPE     A +A   I  TVAQGAHL+N GH+   A LY  TM  ++     +   ++  M   LTS+    C +Q+AWTLR  +D  Y ++ A
Sbjct:  145 NGVIHIIDSVILPADKTIPETADAAGSFKTLLAAAKAAGLAEVLGSEGPFTVFAPTDEAFAKLPEGTVASLLKPENKEKLVAILKYHVVAGRVYSEDAVAAKSAKTLQGSPVAIKVTDGGAMINDSKVVATDVDASNGVIHIIDAVLLPPEN----AVDARRVIENTVAQGAHLFNAGHHAACADLYHNTMTELMSA--NLGDSLNSHMSTVLTSANHTTCPTQRAWTLRTGIDQMYGQIVA 380          
BLAST of mRNA_M-pyrifera_M_contig78833.18519.1 vs. uniprot
Match: A0A5C6D3R9_9BACT (Immunogenic protein MPT70 n=1 Tax=Bythopirellula polymerisocia TaxID=2528003 RepID=A0A5C6D3R9_9BACT)

HSP 1 Score: 260 bits (665), Expect = 2.450e-82
Identity = 146/244 (59.84%), Postives = 177/244 (72.54%), Query Frame = 1
Query:    1 NGIIHVIDQVILPADKNLVETASAAGKFNTLLTAATKAGLAGVLSEKGPFTVFAPTDEAFAQLPEGTIESLLKPENKKKLADILKYHVVAGRVYSEDAVSAGEAKTLQGQKVKISVSGGVAKVNQAKILKTDIDASNGVIHVIDAVILPPEGKKVTAREACHQIRET-VAQGAHLYNCGHYQQSAKLYRKTMQSMLQDVD-GMPSDVSQQMYQALTSSKSMHCASQQAWTLRNALDHAYARMSA 726
            NG+IHVIDQVILPA  N+  TA+ AG F TLL AA  A L  VLS KGPFTVFAPTDEAFA+LP GTIE+LL PENK KLA ILKYHVVAGRVYS DA++AGEAKTLQGQ V I+V  G A VN AK+L TD+DASNGVIHVID V++P + K+       HQ+ ET + +GA L+N GH  + AK+Y  T +S+L   D GM + VS+ +  A+  ++   C++ QAWTLR+ALD AY  M A
Sbjct:  154 NGVIHVIDQVILPAVDNIPATAAKAGSFKTLLAAAEAADLVEVLSGKGPFTVFAPTDEAFAKLPAGTIETLLNPENKAKLASILKYHVVAGRVYSTDALAAGEAKTLQGQSVSIAVQSGAAMVNNAKLLATDLDASNGVIHVIDTVLMPSDTKQAALMP--HQMIETAIREGAPLFNAGHADECAKVYMTTAKSLLSMEDHGMSTSVSRTLQTAVNKAEHCSCSNTQAWTLRHALDSAYNSMQA 395          
BLAST of mRNA_M-pyrifera_M_contig78833.18519.1 vs. uniprot
Match: A0A518G3R8_9BACT (Immunogenic protein MPT70 n=1 Tax=Aureliella helgolandensis TaxID=2527968 RepID=A0A518G3R8_9BACT)

HSP 1 Score: 259 bits (662), Expect = 5.810e-82
Identity = 142/238 (59.66%), Postives = 173/238 (72.69%), Query Frame = 1
Query:    1 NGIIHVIDQVILPADKNLVETASAAGKFNTLLTAATKAGLAGVLSEKGPFTVFAPTDEAFAQLPEGTIESLLKPENKKKLADILKYHVVAGRVYSEDAVSAGEAKTLQGQKVKISVSGGVAKVNQAKILKTDIDASNGVIHVIDAVILPPEGKKVTAREACHQIRETVAQGAHLYNCGHYQQSAKLYRKTMQSMLQDVDGMPSDVSQQMYQALTSSKSMHCASQQAWTLRNALDHAYA 714
            NGIIHVID VILP+  NLV TA  AG F TLL AA  AGL   LS +   TVFAPTD+AFA+LP GT+ESLLKPENK KLA ILKYHVVAGRVYSEDA+ A  AKTLQG  V I+V+ G A+VN A ++ TDIDASNGVIHVIDAVILPPE KKV+A +A   I + +AQG+  YN GH++  A+LY  T  ++L D   +P  V  ++  A+T ++   C++ +AWTLRN LD AY+
Sbjct:  150 NGIIHVIDSVILPSSDNLVTTADKAGTFKTLLAAAEAAGLVEALSGETELTVFAPTDDAFAKLPAGTVESLLKPENKDKLAGILKYHVVAGRVYSEDALEAKVAKTLQGATVAITVTDGKARVNDANLIATDIDASNGVIHVIDAVILPPEPKKVSATKASQVIVDAIAQGSSTYNAGHHEACAQLYMTTTTNLLGD-RSLPVHVVSKLQHAMTQAQHTSCSTSRAWTLRNGLDQAYS 386          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78833.18519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7KCV9_9PLAN3.640e-16299.59Beta-Ig-H3/fasciclin n=6 Tax=Gimesia TaxID=1649453... [more]
A0A518A396_9PLAN5.140e-13684.36Immunogenic protein MPT70 n=2 Tax=Gimesia panareen... [more]
A0A518I9G2_9PLAN8.430e-11874.07Immunogenic protein MPT70 n=2 Tax=Gimesia TaxID=16... [more]
A6CBF8_9PLAN3.430e-10769.14Uncharacterized protein n=11 Tax=Planctomycetaceae... [more]
A0A517W061_9PLAN5.590e-10668.31Immunogenic protein MPT70 n=2 Tax=Gimesia aquarii ... [more]
A0A518FMJ7_9PLAN2.380e-9365.35Immunogenic protein MPT70 n=1 Tax=Gimesia panareen... [more]
A0A5Q4GYV7_9PLAN7.760e-8657.44Fasciclin domain-containing protein n=1 Tax=Planct... [more]
A0A0J1B8P7_RHOIS1.900e-8358.68Putative Sensory subunit of low CO2-induced protei... [more]
A0A5C6D3R9_9BACT2.450e-8259.84Immunogenic protein MPT70 n=1 Tax=Bythopirellula p... [more]
A0A518G3R8_9BACT5.810e-8259.66Immunogenic protein MPT70 n=1 Tax=Aureliella helgo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78833contigM-pyrifera_M_contig78833:2..733 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score327.4
Seed ortholog evalue5.7e-87
Seed eggNOG ortholog344747.PM8797T_15686
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG2335 Secreted and surface protein containing fasciclin-like repeats
EggNOG OGs2IZDI@203682,COG2335@1,COG2335@2
COG Functional cat.M
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size732
Cds size732
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816691.2156658-CDS-M-pyrifera_M_contig78833:1..7331622816691.2156658-CDS-M-pyrifera_M_contig78833:1..733Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78833 2..733 +
1692278122.2542694-CDS-M-pyrifera_M_contig78833:1..7331692278122.2542694-CDS-M-pyrifera_M_contig78833:1..733Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78833 2..733 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78833.18519.1prot_M-pyrifera_M_contig78833.18519.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig78833 2..733 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig78833.18519.1

>prot_M-pyrifera_M_contig78833.18519.1 ID=prot_M-pyrifera_M_contig78833.18519.1|Name=mRNA_M-pyrifera_M_contig78833.18519.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=244bp
NGIIHVIDQVILPADKNLVETASAAGKFNTLLTAATKAGLAGVLSEKGPF
TVFAPTDEAFAQLPEGTIESLLKPENKKKLADILKYHVVAGRVYSEDAVS
AGEAKTLQGQKVKISVSGGVAKVNQAKILKTDIDASNGVIHVIDAVILPP
EGKKVTAREACHQIRETVAQGAHLYNCGHYQQSAKLYRKTMQSMLQDVDG
MPSDVSQQMYQALTSSKSMHCASQQAWTLRNALDHAYARMSAL*
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mRNA from alignment at M-pyrifera_M_contig78833:2..733+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig78833.18519.1 ID=mRNA_M-pyrifera_M_contig78833.18519.1|Name=mRNA_M-pyrifera_M_contig78833.18519.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig78833:2..733+ (Macrocystis pyrifera P11B4 male)
AACGGGATCATTCATGTGATCGACCAGGTAATCTTGCCCGCAGACAAGAA TCTCGTGGAGACCGCATCTGCTGCTGGTAAGTTCAATACCCTGTTAACAG CTGCGACCAAAGCTGGTTTGGCAGGGGTGTTGTCAGAGAAAGGGCCTTTC ACAGTGTTTGCTCCCACAGACGAAGCATTCGCTCAACTACCAGAAGGCAC GATTGAATCATTGTTGAAGCCAGAAAATAAGAAGAAACTGGCCGACATTT TGAAGTACCACGTTGTCGCCGGCCGCGTCTATTCAGAAGATGCCGTGTCT GCAGGCGAAGCTAAAACGCTGCAGGGGCAGAAGGTGAAGATCAGTGTTAG TGGTGGTGTCGCCAAAGTAAATCAAGCTAAAATCCTCAAAACTGATATCG ATGCTTCGAACGGCGTAATTCATGTGATTGATGCAGTAATTTTGCCGCCG GAAGGCAAGAAAGTAACGGCTCGAGAAGCCTGTCACCAGATTCGTGAGAC AGTTGCCCAGGGGGCTCACCTGTATAACTGCGGTCACTATCAGCAATCAG CGAAATTGTATCGAAAGACGATGCAATCCATGTTACAGGATGTGGATGGA ATGCCTTCTGATGTCAGTCAGCAGATGTATCAAGCATTGACCTCATCCAA GAGCATGCATTGTGCATCGCAGCAAGCTTGGACGCTGCGGAATGCATTAG ACCATGCCTACGCACGGATGTCTGCACTGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig78833:2..733+

>mRNA_M-pyrifera_M_contig78833.18519.1 ID=mRNA_M-pyrifera_M_contig78833.18519.1|Name=mRNA_M-pyrifera_M_contig78833.18519.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1464bp|location=Sequence derived from alignment at M-pyrifera_M_contig78833:2..733+ (Macrocystis pyrifera P11B4 male)
AACGGGATCATTCATGTGATCGACCAGGTAATCTTGCCCGCAGACAAGAA
TCTCGTGGAGACCGCATCTGCTGCTGGTAAGTTCAATACCCTGTTAACAG
CTGCGACCAAAGCTGGTTTGGCAGGGGTGTTGTCAGAGAAAGGGCCTTTC
ACAGTGTTTGCTCCCACAGACGAAGCATTCGCTCAACTACCAGAAGGCAC
GATTGAATCATTGTTGAAGCCAGAAAATAAGAAGAAACTGGCCGACATTT
TGAAGTACCACGTTGTCGCCGGCCGCGTCTATTCAGAAGATGCCGTGTCT
GCAGGCGAAGCTAAAACGCTGCAGGGGCAGAAGGTGAAGATCAGTGTTAG
TGGTGGTGTCGCCAAAGTAAATCAAGCTAAAATCCTCAAAACTGATATCG
ATGCTTCGAACGGCGTAATTCATGTGATTGATGCAGTAATTTTGCCGCCG
GAAGGCAAGAAAGTAACGGCTCGAGAAGCCTGTCACCAGATTCGTGAGAC
AGTTGCCCAGGGGGCTCACCTGTATAACTGCGGTCACTATCAGCAATCAG
CGAAATTGTATCGAAAGACGATGCAATCCATGTTACAGGATGTGGATGGA
ATGCCTTCTGATGTCAGTCAGCAGATGTATCAAGCATTGACCTCATCCAA
GAGCATGCATTGTGCATCGCAGCAAGCTTGGACGCTGCGGAATGCATTAG
ACCATGCCTACGCACGGATGTCTGCACTGTAAAACGGGATCATTCATGTG
ATCGACCAGGTAATCTTGCCCGCAGACAAGAATCTCGTGGAGACCGCATC
TGCTGCTGGTAAGTTCAATACCCTGTTAACAGCTGCGACCAAAGCTGGTT
TGGCAGGGGTGTTGTCAGAGAAAGGGCCTTTCACAGTGTTTGCTCCCACA
GACGAAGCATTCGCTCAACTACCAGAAGGCACGATTGAATCATTGTTGAA
GCCAGAAAATAAGAAGAAACTGGCCGACATTTTGAAGTACCACGTTGTCG
CCGGCCGCGTCTATTCAGAAGATGCCGTGTCTGCAGGCGAAGCTAAAACG
CTGCAGGGGCAGAAGGTGAAGATCAGTGTTAGTGGTGGTGTCGCCAAAGT
AAATCAAGCTAAAATCCTCAAAACTGATATCGATGCTTCGAACGGCGTAA
TTCATGTGATTGATGCAGTAATTTTGCCGCCGGAAGGCAAGAAAGTAACG
GCTCGAGAAGCCTGTCACCAGATTCGTGAGACAGTTGCCCAGGGGGCTCA
CCTGTATAACTGCGGTCACTATCAGCAATCAGCGAAATTGTATCGAAAGA
CGATGCAATCCATGTTACAGGATGTGGATGGAATGCCTTCTGATGTCAGT
CAGCAGATGTATCAAGCATTGACCTCATCCAAGAGCATGCATTGTGCATC
GCAGCAAGCTTGGACGCTGCGGAATGCATTAGACCATGCCTACGCACGGA
TGTCTGCACTGTAA
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