mRNA_M-pyrifera_M_contig78657.18487.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78657.18487.1 vs. uniprot
Match: UPI00145523E6 (protein RCC2 homolog n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI00145523E6) HSP 1 Score: 67.0 bits (162), Expect = 1.000e-10 Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 1 Query: 49 HVAVVTENGECFVWGDGEKGQLGIAASMKRSLRPFRIPATKDKYPLVAVATGASHTLGLTEQGAVVAFGSNKMGQ 273 H ++TE G+ WG G+KGQLG A++ R P I A KD + +V A G SH++ LT++GAV AFG NK+GQ Sbjct: 110 HSIIITEAGKAMSWGRGDKGQLGHGAAV-RCEAPKIIEALKD-FNIVNAACGRSHSMCLTDEGAVYAFGDNKLGQ 182
BLAST of mRNA_M-pyrifera_M_contig78657.18487.1 vs. uniprot
Match: UPI0018D5C136 (protein RCC2 homolog n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D5C136) HSP 1 Score: 66.2 bits (160), Expect = 1.880e-10 Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 1 Query: 49 HVAVVTENGECFVWGDGEKGQLGIAASMKRSLRPFRIPATKDKYPLVAVATGASHTLGLTEQGAVVAFGSNKMGQ 273 H ++TE G+ WG G+KGQLG + R P I K+ + +V A G SHT+ LTE+GAV AFG NK+GQ Sbjct: 111 HSVIITEAGKAMSWGRGDKGQLGHG-DLNRCEAPKLIEGLKE-FTIVNAACGRSHTMCLTEEGAVYAFGDNKLGQ 183
BLAST of mRNA_M-pyrifera_M_contig78657.18487.1 vs. uniprot
Match: UPI001425B338 (protein RCC2-like isoform X1 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425B338) HSP 1 Score: 63.5 bits (153), Expect = 1.610e-9 Identity = 36/80 (45.00%), Postives = 44/80 (55.00%), Query Frame = 1 Query: 49 HVAVVTENGECFVWGDGEKGQLGIAASMKRSLRPFRIPATKDKYPLVAVATGASHTLGLTEQGAVVAFGSNKMGQCAQPF 288 H +VTE G+ WG +K QLG +++R P I KD Y LV A G +HTL LT +G V AFG NK GQ F Sbjct: 121 HTLLVTEEGKAMSWGRNDKEQLGHCDAIRRDT-PTLIETLKD-YTLVEAACGRNHTLCLTNEGEVFAFGENKFGQLGLGF 198
BLAST of mRNA_M-pyrifera_M_contig78657.18487.1 vs. uniprot
Match: A0A8B7Y0D8_ACAPL (protein RCC2 homolog n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y0D8_ACAPL) HSP 1 Score: 63.2 bits (152), Expect = 2.270e-9 Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 1 Query: 49 HVAVVTENGECFVWGDGEKGQLGIAASMKRSLRPFRIPATKDKYPLVAVATGASHTLGLTEQGAVVAFGSNKMGQ 273 H ++TE G+ WG G+KGQLG + R P I K+ + +V A G +HT+ LTE+G V AFG NK+GQ Sbjct: 110 HSIIITEAGKAMSWGRGDKGQLGHG-DLNRCEAPKLIEGLKE-FTIVNAACGRNHTMCLTEEGVVYAFGDNKLGQ 182
BLAST of mRNA_M-pyrifera_M_contig78657.18487.1 vs. uniprot
Match: A0A7S0SJ66_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SJ66_9CHLO) HSP 1 Score: 59.7 bits (143), Expect = 3.160e-9 Identity = 38/109 (34.86%), Postives = 51/109 (46.79%), Query Frame = 1 Query: 46 GHVAVVTENGECFVWGDGEKGQLGIAASMKR-------------------SLRPFRIPATK-DKYPLVAVATGASHTLGLTEQGAVVAFGSNKMGQCAQPFDVNVCHEP 312 GH A VT GE F WG GQLG S++R + RP+R+ ++ LV VA GA+HT+ LT +G + A+GSN GQ + H P Sbjct: 1 GHAAAVTATGELFTWGGNSDGQLG--RSLRRGQVRGPVRFAAATGVAAADTTRPYRVVGGGLSRHDLVGVAVGAAHTVALTSEGQLWAWGSNAQGQLGRLECAERSHHP 107
BLAST of mRNA_M-pyrifera_M_contig78657.18487.1 vs. uniprot
Match: A0A0K8TBL4_LYGHE (RCC1 and BTB domain-containing protein 1 n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0K8TBL4_LYGHE) HSP 1 Score: 62.4 bits (150), Expect = 4.130e-9 Identity = 35/87 (40.23%), Postives = 49/87 (56.32%), Query Frame = 1 Query: 40 GRGHVAVVTENGECFVWGDGEKGQLGIAASMKRSLRPFRIPATKDKYPLVAVATGASHTLGLTEQGAVVAFGSNKMGQCAQPFDVNV 300 G+ VT NGE + WG GQLG+ ++ + L P R+ A + +V V G SHTL L+++G V A+G+N GQ A P NV Sbjct: 188 GQTSTIAVTNNGEVYGWGYNGNGQLGVGNTVNQ-LNPCRVMALSNTV-IVKVVCGNSHTLALSDEGKVYAWGANTYGQLAMPTKSNV 272
BLAST of mRNA_M-pyrifera_M_contig78657.18487.1 vs. uniprot
Match: A0A6B2KZ94_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KZ94_9EUKA) HSP 1 Score: 62.4 bits (150), Expect = 4.200e-9 Identity = 33/76 (43.42%), Postives = 45/76 (59.21%), Query Frame = 1 Query: 49 HVAVVTENGECFVWGDGEKGQLGIAASMKRSLRPFRIPATKDKYPLVAVATGASHTLGLTEQGAVVAFGSNKMGQC 276 H AV+T E +V+G G+KGQLG+ ++RP +P DK + VA G SHT+ T G + AFG N+ GQC Sbjct: 21 HSAVLTSKNELYVFGRGDKGQLGLGVD--NAMRPSVVPFFADKK-VAKVACGNSHTIVCTMNGEIYAFGDNEKGQC 93
BLAST of mRNA_M-pyrifera_M_contig78657.18487.1 vs. uniprot
Match: A0A7S3YLJ7_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YLJ7_9EUKA) HSP 1 Score: 62.4 bits (150), Expect = 4.310e-9 Identity = 33/95 (34.74%), Postives = 53/95 (55.79%), Query Frame = 1 Query: 28 EVDVGRGHVAVVTENGECFVWGDGEKGQLGIAASMKRSLRPFRIPATKDKYPLVAVATGASHTLGLTEQGAVVAFGSNKMGQCAQPFDVNVCHEP 312 +V G VT +G+C+ WG G++G+LG+ S + P + + + +VAV+ G+ H LGLT G V A+GS + GQ + N C++P Sbjct: 409 DVAAGDTFCCAVTRHGQCYAWGTGKEGELGLGQSALKKNYPCLVVSLRSTS-VVAVSCGSHHVLGLTGNGQVFAWGSGEYGQLGHGGNSN-CYKP 501
BLAST of mRNA_M-pyrifera_M_contig78657.18487.1 vs. uniprot
Match: S4R6Y3_PETMA (Regulator of chromosome condensation 2 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4R6Y3_PETMA) HSP 1 Score: 62.0 bits (149), Expect = 5.470e-9 Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = 1 Query: 49 HVAVVTENGECFVWGDGEKGQLGIAASMKRSLRPFRIPATKDKYPLVAVATGASHTLGLTEQGAVVAFGSNKMGQ 273 H ++T+ G+ + WG G+KGQLG +KR P + A K +VA A G SHTL +TE G V+AFG N +GQ Sbjct: 65 HCLLLTDLGQVYTWGRGDKGQLGHG-DLKRVEAPRPVDALF-KLTVVAAACGRSHTLCITETGVVMAFGENHLGQ 137
BLAST of mRNA_M-pyrifera_M_contig78657.18487.1 vs. uniprot
Match: A0A7K7GSB7_ERIRU (RCC2 protein (Fragment) n=1 Tax=Erithacus rubecula TaxID=37610 RepID=A0A7K7GSB7_ERIRU) HSP 1 Score: 61.6 bits (148), Expect = 7.070e-9 Identity = 37/89 (41.57%), Postives = 47/89 (52.81%), Query Frame = 1 Query: 49 HVAVVTENGECFVWGDGEKGQLGIAASMKRSLRPFRIPATKDKYPLVAVATGASHTLGLTEQGAVVAFGSNKMGQCAQPFDVNVCHEPT 315 H ++T G + WG EKGQLG + KR P I A + +VA A G +HTL LTE G+V AFG NK+GQ + PT Sbjct: 39 HSLLITAEGRLWSWGRNEKGQLGHGDT-KRVEAPRPIEALAGEA-IVAAACGRNHTLALTENGSVFAFGENKLGQLGLGNQTDAVPSPT 125 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78657.18487.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78657.18487.1 >prot_M-pyrifera_M_contig78657.18487.1 ID=prot_M-pyrifera_M_contig78657.18487.1|Name=mRNA_M-pyrifera_M_contig78657.18487.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp MFKPPRAPAEVDVGRGHVAVVTENGECFVWGDGEKGQLGIAASMKRSLRPback to top mRNA from alignment at M-pyrifera_M_contig78657:503..820+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78657.18487.1 ID=mRNA_M-pyrifera_M_contig78657.18487.1|Name=mRNA_M-pyrifera_M_contig78657.18487.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=318bp|location=Sequence derived from alignment at M-pyrifera_M_contig78657:503..820+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78657:503..820+ >mRNA_M-pyrifera_M_contig78657.18487.1 ID=mRNA_M-pyrifera_M_contig78657.18487.1|Name=mRNA_M-pyrifera_M_contig78657.18487.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig78657:503..820+ (Macrocystis pyrifera P11B4 male)back to top |