mRNA_M-pyrifera_M_contig7855.18457.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7855.18457.1
Unique NamemRNA_M-pyrifera_M_contig7855.18457.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig7855.18457.1 vs. uniprot
Match: D7G3A4_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3A4_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 2.130e-65
Identity = 102/119 (85.71%), Postives = 110/119 (92.44%), Query Frame = 2
Query:    2 VVGWILVDQGVRFPGAQYAAISQSVDAHDPMVAAGNMTIMLLGAFFLEMVGGAAIFGAASGSGRAPGDFGMDPLNLTSNPSKKARFELSEIQHCRLAMMAISGIATQSVLNGGAFPYTG 358
            VVGWILVDQGVRFPG QYAAISQSV AHDPMVA+GNMT++LL  F LEMVGGAAIFGAASGSGR PGDFG+DPLNLTSNP+KKAR+EL+EIQHCRLAM AI GIATQ+VLNGG FPYTG
Sbjct:  117 VVGWILVDQGVRFPGDQYAAISQSVGAHDPMVASGNMTLLLLVVFLLEMVGGAAIFGAASGSGRQPGDFGLDPLNLTSNPAKKARYELNEIQHCRLAMSAIGGIATQAVLNGGDFPYTG 235          
BLAST of mRNA_M-pyrifera_M_contig7855.18457.1 vs. uniprot
Match: A0A836CGA6_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGA6_9STRA)

HSP 1 Score: 138 bits (347), Expect = 4.480e-38
Identity = 67/117 (57.26%), Postives = 88/117 (75.21%), Query Frame = 2
Query:    2 VVGWILVDQGVRFPGAQYAAISQSVDAHDPMVAAGNMTIMLLGAFFLEMVGGAAIFGAASGSGRAPGDFGMDPLNLTSNPSKKARFELSEIQHCRLAMMAISGIATQSVLNGGAFPY 352
            VVGW+ VD G+R PG +Y  +S ++ AHD MV+ GNM +ML  A  LE++ GAAIF AA GSGR PGDF +DPL L  + +K AR++LSE+++ RLAM+A SGIATQ+VL G +FPY
Sbjct:  114 VVGWLAVDMGLRLPGTKYMGLS-AISAHDAMVSGGNMVVMLHFALLLELINGAAIFAAAQGSGRKPGDFCLDPLGLAKDSAKSARYQLSEVKNGRLAMLAFSGIATQAVLTGHSFPY 229          
BLAST of mRNA_M-pyrifera_M_contig7855.18457.1 vs. uniprot
Match: A0A8J5XPQ1_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XPQ1_DIALT)

HSP 1 Score: 110 bits (274), Expect = 1.870e-27
Identity = 53/117 (45.30%), Postives = 78/117 (66.67%), Query Frame = 2
Query:    2 VVGWILVDQGVRFPGAQYAAISQSVDAHDPMVAAGNMTIMLLGAFFLEMVGGAAIFGAASGSGRAPGDFGMDPLNLTSNPSKKARFELSEIQHCRLAMMAISGIATQSVLNGGAFPY 352
            V GW++VD G+ FPGAQY  + +++ AH+ MV +GNM ++L+    LE+ GG A++  A+GSGRA GD+  DPL    + +     +L EI++ RLAM+A SGI TQ+ L+G   PY
Sbjct:   84 VAGWLVVDLGIHFPGAQYEGL-RALTAHNAMVESGNMWLLLIAVSILELAGGLALYEQANGSGRAAGDYKFDPLGYAQDEATLQELQLKEIKNGRLAMIAFSGIVTQAALSGRGLPY 199          
BLAST of mRNA_M-pyrifera_M_contig7855.18457.1 vs. uniprot
Match: A0A6V1NRI4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NRI4_HETAK)

HSP 1 Score: 110 bits (275), Expect = 5.080e-27
Identity = 59/119 (49.58%), Postives = 80/119 (67.23%), Query Frame = 2
Query:    2 VVGWILVDQGVRFPGAQYAAISQSVDAHDPMVAAGNMTIMLLGAFFLEMVGGAAIFGAASGSGRAPGDFGMDPLNLTS-NPSKKARFELSEIQHCRLAMMAISGIATQSVLNG-GAFPY 352
            V+G + VD G R PGA +A +  ++ AHD MVA G M ++LL A   E++GGAA++ AA GSGR PGDF +DP +L   +P +K  F+  EI++ RLAM+ ISGI TQ+ L G   FPY
Sbjct:  115 VLGCVAVDLGARLPGAAFAGVRDALGAHDVMVARGPMALLLLAAGAAEVLGGAAVYEAAKGSGREPGDFQLDPFSLVKGDPVRKKDFQTKEIKNGRLAMIGISGILTQAGLEGQSVFPY 233          
BLAST of mRNA_M-pyrifera_M_contig7855.18457.1 vs. uniprot
Match: F0YCE3_AURAN (Uncharacterized protein LHC26 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCE3_AURAN)

HSP 1 Score: 107 bits (267), Expect = 3.260e-26
Identity = 59/117 (50.43%), Postives = 73/117 (62.39%), Query Frame = 2
Query:    2 VVGWILVDQGVRFPGAQYAAISQSVDAHDPMVAAGNMTIMLLGAFFLEMVGGAAIFGAASGSGRAPGDFGMDPLNLTSNPSKKARFELSEIQHCRLAMMAISGIATQSVLNGGAFPY 352
            +VG++ VD G+ FPGA+Y  +S S+ AHD MVA+GNM  MLL    LE++    +  AA GSGR  GDF  DPL  T        FE +EIQH RLAM+A SG+ TQS L    FPY
Sbjct:  103 IVGYLTVDAGIHFPGARYEGLS-SLQAHDAMVASGNMGFMLLAVGVLELLSMVGVVQAAKGSGRKAGDFSWDPLYFTQGAKADFFFE-AEIQHARLAMLAFSGLVTQSALLEKGFPY 217          
BLAST of mRNA_M-pyrifera_M_contig7855.18457.1 vs. uniprot
Match: A0A7S2S869_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S869_9STRA)

HSP 1 Score: 103 bits (258), Expect = 6.550e-25
Identity = 55/117 (47.01%), Postives = 72/117 (61.54%), Query Frame = 2
Query:    2 VVGWILVDQGVRFPGAQYAAISQSVDAHDPMVAAGNMTIMLLGAFFLEMVGGAAIFGAASGSGRAPGDFGMDPLNLTSNPSKKARFELSEIQHCRLAMMAISGIATQSVLNGGAFPY 352
            V G+   D G + PG Q+   S   DAH+  V+AG MT+M    F LE + G AI  + +GSGRA GD+G+DPL L+  P K A  ++ EI H RLAM+A SG+ TQ+VL    FPY
Sbjct:   99 VTGFAATDLGFKLPGEQFNVAS--ADAHNMAVSAGYMTVMGCAIFALECISGLAIQESLAGSGRAAGDYGLDPLKLSDKPDKMADMQMKEITHARLAMLAFSGMVTQAVLFDKGFPY 213          
BLAST of mRNA_M-pyrifera_M_contig7855.18457.1 vs. uniprot
Match: A0A7S1Y167_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y167_9STRA)

HSP 1 Score: 104 bits (260), Expect = 7.070e-25
Identity = 62/146 (42.47%), Postives = 80/146 (54.79%), Query Frame = 2
Query:    5 VGWILVDQGVRFPGAQYAAISQSVDAHDPMVAAGNMTIMLLGAFFLEMVGGAAIFGAASGSGRAPGDFGMDPLNL-TSNPSKKARFELSEIQHCR-----------------------------LAMMAISGIATQSVLNGGAFPY 352
            +GW+  D G RFPG  Y+ IS ++ AHD MV  GNM  +L   F +E++ GAAI+ AA GSGRAPGD+G DPL L   N +KKA + L EI++ R                             LAM+  SGI TQ+ L G +FPY
Sbjct:  103 LGWVATDLGFRFPGEAYSGIS-TLAAHDAMVKNGNMGFLLTVIFVIEILSGAAIYEAAKGSGRAPGDYGFDPLGLGRGNDAKKADYALKEIKNARCVPSTILDPNACKSSSHPPTSPSPPSFSSLAMLGFSGIVTQAALTGHSFPY 247          
BLAST of mRNA_M-pyrifera_M_contig7855.18457.1 vs. uniprot
Match: A0A6U4L863_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L863_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.220e-24
Identity = 62/146 (42.47%), Postives = 80/146 (54.79%), Query Frame = 2
Query:    5 VGWILVDQGVRFPGAQYAAISQSVDAHDPMVAAGNMTIMLLGAFFLEMVGGAAIFGAASGSGRAPGDFGMDPLNL-TSNPSKKARFELSEIQHCR-----------------------------LAMMAISGIATQSVLNGGAFPY 352
            +GW+  D G RFPG  Y+ IS ++ AHD MV  GNM  +L   F +E++ GAAI+ AA GSGRAPGD+G DPL L   N +KKA + L EI++ R                             LAM+  SGI TQ+ L G +FPY
Sbjct:  130 LGWVATDLGFRFPGEAYSGIS-TLAAHDAMVKNGNMGFLLTVIFVIEILSGAAIYEAAKGSGRAPGDYGFDPLGLGRGNDAKKADYALKEIKNARCVPSTILDPNACKSSSHPPTSPSPPSFSSLAMLGFSGIVTQAALTGHSFPY 274          
BLAST of mRNA_M-pyrifera_M_contig7855.18457.1 vs. uniprot
Match: A0A0G4FEH5_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FEH5_VITBC)

HSP 1 Score: 104 bits (259), Expect = 1.230e-24
Identity = 58/121 (47.93%), Postives = 75/121 (61.98%), Query Frame = 2
Query:    2 VVGWILVDQGVRFPGAQYAAISQSVDAHDPMVAAGNMTIMLLGAFFLEMVGGAAIFGAASG--SGRAPGDFGMDPLNL--TSNPSKKARFELSEIQHCRLAMMAISGIATQSVLNGGAFPY 352
            V+G++  D G+RFPGAQ+   S + +AHD MVA+GNM +MLL A FLE   G  I+    G  + R PGD+  DPLN     N S K      E+++ RLAM+A  GI TQ+VLN G FPY
Sbjct:  136 VLGYVATDLGLRFPGAQFQGFS-AAEAHDKMVASGNMMVMLLAAGFLEFFRGITIWDFTRGFYAEREPGDYNFDPLNFYKNKNDSTKDAMRARELKNGRLAMLAFGGIVTQAVLNDGGFPY 255          
BLAST of mRNA_M-pyrifera_M_contig7855.18457.1 vs. uniprot
Match: A0A7S2CMP0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMP0_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.200e-21
Identity = 54/117 (46.15%), Postives = 65/117 (55.56%), Query Frame = 2
Query:    2 VVGWILVDQGVRFPGAQYAAISQSVDAHDPMVAAGNMTIMLLGAFFLEMVGGAAIFGAASGSGRAPGDFGMDPLNLTSNPSKKARFELSEIQHCRLAMMAISGIATQSVLNGGAFPY 352
            + G+I  D G R PG QY   S    AHD  V +G MT M +    +E V   AI    +GSGR PGDF +DPL L S+P K     L EI H RLAM+A  G+ TQ+VL    FPY
Sbjct:  130 ITGFIATDIGFRLPGEQYDVPSYL--AHDVAVKSGAMTFMFIAISLIETVSFLAIQEMLAGSGRKPGDFNLDPLQLASSPEKLETMLLKEITHARLAMLAFGGLVTQAVLTEKGFPY 244          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7855.18457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3A4_ECTSI2.130e-6585.71Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A836CGA6_9STRA4.480e-3857.26Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A8J5XPQ1_DIALT1.870e-2745.30Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A6V1NRI4_HETAK5.080e-2749.58Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0YCE3_AURAN3.260e-2650.43Uncharacterized protein LHC26 n=1 Tax=Aureococcus ... [more]
A0A7S2S869_9STRA6.550e-2547.01Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S1Y167_9STRA7.070e-2542.47Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A6U4L863_9STRA1.220e-2442.47Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A0G4FEH5_VITBC1.230e-2447.93Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S2CMP0_9STRA1.200e-2146.15Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7855contigM-pyrifera_M_contig7855:8121..10491 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score150.6
Seed ortholog evalue3.5e-34
Seed eggNOG ortholog2880.D7G3A4
Preferred nameLhcr11
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2DDP1@1,2S5ND@2759
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-07_005670.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size437
Cds size270
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7855.18457.1prot_M-pyrifera_M_contig7855.18457.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7855 8197..10400 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816687.8985386-UTR-M-pyrifera_M_contig7855:8120..81961622816687.8985386-UTR-M-pyrifera_M_contig7855:8120..8196Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7855 8121..8196 -
1692278120.3145325-UTR-M-pyrifera_M_contig7855:8120..81961692278120.3145325-UTR-M-pyrifera_M_contig7855:8120..8196Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7855 8121..8196 -
1622816687.9367993-UTR-M-pyrifera_M_contig7855:10400..104911622816687.9367993-UTR-M-pyrifera_M_contig7855:10400..10491Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7855 10401..10491 -
1692278120.3551736-UTR-M-pyrifera_M_contig7855:10400..104911692278120.3551736-UTR-M-pyrifera_M_contig7855:10400..10491Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7855 10401..10491 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816687.911336-CDS-M-pyrifera_M_contig7855:8196..83571622816687.911336-CDS-M-pyrifera_M_contig7855:8196..8357Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7855 8197..8357 -
1692278120.325607-CDS-M-pyrifera_M_contig7855:8196..83571692278120.325607-CDS-M-pyrifera_M_contig7855:8196..8357Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7855 8197..8357 -
1622816687.9254076-CDS-M-pyrifera_M_contig7855:10291..104001622816687.9254076-CDS-M-pyrifera_M_contig7855:10291..10400Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7855 10292..10400 -
1692278120.3362274-CDS-M-pyrifera_M_contig7855:10291..104001692278120.3362274-CDS-M-pyrifera_M_contig7855:10291..10400Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7855 10292..10400 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7855.18457.1

>prot_M-pyrifera_M_contig7855.18457.1 ID=prot_M-pyrifera_M_contig7855.18457.1|Name=mRNA_M-pyrifera_M_contig7855.18457.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp
MVAAGNMTIMLLGAFFLEMVGGAAIFGAASGSGRAPGDFGMDPLNLTSNP
SKKARFELSEIQHCRLAMMAISGIATQSVLNGGAFPYTG*
back to top

mRNA from alignment at M-pyrifera_M_contig7855:8121..10491-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7855.18457.1 ID=mRNA_M-pyrifera_M_contig7855.18457.1|Name=mRNA_M-pyrifera_M_contig7855.18457.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2371bp|location=Sequence derived from alignment at M-pyrifera_M_contig7855:8121..10491- (Macrocystis pyrifera P11B4 male)
AGTGGTGGGCTGGATCTTGGTGGACCAGGGGGTTCGGTTCCCTGGGGCAC AGTACGCGGCTATCAGCCAGTCCGTCGATGCGCACGACCCCATGGTGGCC GCGGGTAACATGACCATAATGCTCCTCGGCGCGTTTTTCCTTGAGATGGT CGGGGGAGCCGCGATCTTCGGAGCAGCAAGCGGATCCGGCCGCGCCCCGG GTAAGGCCACTTTTGTTGGTTGCTACGTCTTTATACTGTTGTATATTATA TACCAATGGCAATGCCAATGCCAATGCCAGTGCCAGTGCCAGTGCCAGTG CCAGTGCCAGTGCCAGTACTACGCTGTCCCAAGAGATGAGCGCATTGTTT CATGTTGATATTATAGTTGGCACGATATATACTTACTTGCCTTTCGGGAC ATAGTGGTATACCGGTACCTGATACATACCTGGTCCATAGGGTATTTGCG ATTTTCCCCGCGAAAGGAGATGCAGTAGATGCAGGCGTGTCTACTTCGGG TATGCCCACATTTAGATTGCTGCGTACGTGTTGCTGCAATGTGTATTGCG AGTAGACGTAGGGTATATATACATGTTCCTACTCGACTGCGCGAAGCGTG ACAGGCGCACCGATTAATCCATCTATTAGCTACCAGGTATCGTCTGCTCA ATCGTCTATGGTACCATTGGACCAGAGTTTTTTTCAACTTGTACAGCAGA CTGCGTACCCAGTGTTGAAACATGCCGGTATATTTATCGCTGACACATGT TTGTCCGGTTCGAGGGTGACTGCATTGCTATCATCTTGTTCGATGAAAGT TGTGGTACACAATCCTATCGTACGATAGGCATGTTGGACTGGTTGCTACT ATTGGTGCTATTTTTTCAGCAGGAGATCGCCCCTGAGCGCAAGCGCAAAA TGTGGCGTGTTGAGAACGGGTACATGGAAAAGCCGTGCTTTTTGTTACAG CGGTTGCGGTTGCTGTTGGTAGTGTTTTGGACAGCTATGCTTGCTCGAGC GACTTGCGCTGTCGTTCGGTTGTGACATCGTTCGCTACCGGCGCTCGAGT CGAGCCGAAGTTCATTTTCATTGCGCAACGTTTGTAACTTTTGTAACTTT TGTAACCCTAACCCTAACCCTATAGGACCAAAACAATGACGAACTCGGTG TTACCAGTCGTTTAGTGCCAGCGCGTAGCAGTGCGAGTATCGTCATGTCC TCATGCTGCGTTTGTGCCTTACAGCTACTTACAGTGCGGTTGGGACACAT CCCCTATCCCCTACAGTATGACATGCTGCCGCCAGTTATGTGGGACGTAT TTTGCCCTCTGAACCCCCGAAGGCGTTATTCAGCGTAACGTTAAGGTTAA CGACAGTCGTCTAACAGTCGTTTCAACGGTTGCAATGGGCACCAATTTTC TATTTGTTTCTCAGCGCACGTACCCTTGCACGGCGTAGCGGAGTAACTAC AACAAGAAAACAAAGTCGTACTTGCTGCCCGTGCTGACGTCTGCTGGCAT TTACAGGACGCACTTGTCGTTTGGGTTTCTCGAGGAACACCAAAGTGCGT GGATCGTATGTAGTTGTGGCAGCGTCAATCCGTGCGGAAATCCTGGGTAG TGTTTGCAGCCTTTACAGGGAGGGGTGGTGGGTTCCATTGCTCAAAATGG TTCCATTGCTCTAGGTAGCCCCGTTGTTGTCGTTCCGCCTGCGCCCCTCA TTTACAGAAGCTATGTTGCCGGGTGGGAGTCGTGTAGTCTGCTCTAGGAC ATGTCGACCAAGAGTTGGATCTATATCCTGTACAGCATCTCGTAACGGCA ATACTAATAATAGGATATATCTGATCTATCTATCTTCATGGTCCATCCAC AGATGATCTATCGGATCTGTTCGAGCTGTGGAGTATTCTATTCGTACCTG GTATGGTATACCAGGTACTTACGATCTTCTACCTACTGCACTAGTACACT CCTTGTGCTTTTTCGTGACCAGCTATGTATAGATTAACTAAAACAGCCAG CAAGCAGCTATATGTGAGACCAGCACCAACATGCACTTGCTGTATCATAT GCTGACCTCTGCCTTGCCGCCGTATACACGAACGCTTGCCCTCTACACGA ACGCTGTGTGCCCCGGACACGTTGCTTTCCACAGGAGACTTCGGAATGGA CCCGCTCAACCTCACCTCCAACCCTAGCAAAAAGGCGCGATTCGAATTGA GCGAAATCCAGCACTGCCGGCTGGCCATGATGGCCATCAGCGGCATCGCA ACGCAGTCCGTCCTTAACGGCGGCGCTTTCCCCTACACGGGATAATTTTA TAAAATACACCTCAGCTTACGCTTACTCGATTTTTTTTTTTGTTTTAGGC GGGTTGTCTGGCCTTGCCGTG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig7855:8121..10491-

>mRNA_M-pyrifera_M_contig7855.18457.1 ID=mRNA_M-pyrifera_M_contig7855.18457.1|Name=mRNA_M-pyrifera_M_contig7855.18457.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig7855:8121..10491- (Macrocystis pyrifera P11B4 male)
ATGGTGGCCGCGGGTAACATGACCATAATGCTCCTCGGCGCGTTTTTCCT
TGAGATGGTCGGGGGAGCCGCGATCTTCGGAGCAGCAAGCGGATCCGGCC
GCGCCCCGGATGGTGGCCGCGGGTAACATGACCATAATGCTCCTCGGCGC
GTTTTTCCTTGAGATGGTCGGGGGAGCCGCGATCTTCGGAGCAGCAAGCG
GATCCGGCCGCGCCCCGGGAGACTTCGGAATGGACCCGCTCAACCTCACC
TCCAACCCTAGCAAAAAGGCGCGATTCGAATTGAGCGAAATCCAGCACTG
CCGGCTGGCCATGATGGCCATCAGCGGCATCGCAACGCAGTCCGTCCTTA
ACGGCGGCGCTTTCCCCTACACGGGATAAGAGACTTCGGAATGGACCCGC
TCAACCTCACCTCCAACCCTAGCAAAAAGGCGCGATTCGAATTGAGCGAA
ATCCAGCACTGCCGGCTGGCCATGATGGCCATCAGCGGCATCGCAACGCA
GTCCGTCCTTAACGGCGGCGCTTTCCCCTACACGGGATAA
back to top