mRNA_M-pyrifera_M_contig7852.18452.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7852.18452.1 vs. uniprot
Match: A0A6H5KLQ2_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ2_9PHAE) HSP 1 Score: 640 bits (1652), Expect = 8.870e-204 Identity = 541/1329 (40.71%), Postives = 655/1329 (49.29%), Query Frame = 1
Query: 130 NDGTISMPAGSPTRYDSPYN-----IHGASPPSPPPRALELVKEEVHRALHAFSTRPLKGATHPPAPRDLLRPYDTTRDGRITYVEFEAGLRGLGIGLTGGEAKVLALDVDSGDTGLVDREKFEAAAVGSWG--------RGTATVGAASAXXXXXXXXXXXXXVPPPTESFSAHADRDQGSRATIVSGREGGMNDKPYAGARGLPPPPSVAQK---IKDASNSYAAGK---SRG-SAMSFEQWHRRMTAEGDGKHSA-----KVPANNVSVSGH--GKAKGRARSVRERA-------------------------------DSLNTLRFLLRGQ---DPDSGSTVEGDTGNHGQWFESRDREYRNRXXXXXXXXXXXXXX-ERALPGAAGDGARGCGGASGGERRDRVGVRKSLAPSERHAVGRGLYSATGSVSPGRGRKTGAASHLVDGDASASLQEQERAHKHAGRAESILRVRSRGDLVGLRRALSRADPSRSGVISQREMERVFLRRFGSSFSDDEARGLAARYGKEISGRAMVDYGRLFDNLEAKEAGLCGEATPRREQPSVE------ERGKH-------------------AGTTTPRAILP--APAGSRS-NNRRTGCARTVQNGDGDGSVRE-APPEESQLARRARAKTLALLDLHGTRSVDKVFGLIDPGRAQTLTVEQLREGLRVLSGSDPLSDIEYKALFKAVGGKQGRIKHR---------------------------------------ELLDTLRDAEGVESRERTQRKLAYQARLPVSGRGSAVHWRHSDILDW-YPPAGDE-QSSSR---VPAGKQHKETRRRALVFEKIRERVRRVQDDRDSAGSVLDMFHRRGGGGGXXXXKGEXXXXXXXXXXXXXXXXXXXXXXXQVLTARSEDGKYNPPPLSPSALRAGLISLGVPLGDEDFDAVLASTDPGRHGEVSYPDFCEVLRLHRLHDNPNGRKPGAAAAPGARRPSSAPP------QLSSQAIGQGVAANGAVVASGEXXXXXXXXXXX---RAMELAPAGD--HDLDGGVFHRNPATDGCSNPNFTTTMVPAWDDDGKGRGTWGGGGRCQG-----------RRQLPAPAPALTAACTVVQPKNRGQTVI-----GDNRFQPWIETGAGAERRFRQDLGAKARRHHRSHSLSCHGGELATCEGWNNLRTPPPHTAADGIESWRDTATAAVARGGGGRSRGISRRGRGLAPRDSDLGFGSARMRSASKLNDRCSATAVDGRRXXXXXXXXXT------DEGAGLTRRRSTSLGVEDRYGEWARSSVGDLLRHDSWLGTR 3612
N T S AGSPTR D PY+ IH A PP PPPRALELVKEEVHRAL AFST+P+KG P P DLLRP+D ++DGR+TY EF G+ GLGIGLT EA+ LA VD TGLVDR FEAAA WG +G T S + P E S H D GS IV R+G +K YAG LPPPP+ ++ ++ S G+ +RG S +SF+ W + + ++A K PA+ S G G G + R+ + SL TLR LL+ D + + +T + S E R R R G GDG + + RR R ++ +P + +++V D A RA A RAE IL++RSRGDLVGLRRA+S+ADPS SGVIS+REMERV LRRFG+ DDEAR LAA Y K+ +GR+MVDYGRLFDN+E +E G+ G PS E +H AG R P A AG R+ +++R R V + D VR AP E SQL RRARAKTLALLD HGTRSVD VFGL+D QT+ +LRE LR+L GSD LS+IE++ALFK + + RI +R ELLDTLR +E E RERTQRKL +QA LP SGRGSA+HWRHSD+LDW PPAG + SR + G+QHKE+RR+ALVF+++R+ V+++Q+ ++SA V DMF +RG XXXXXXXXXX +D P PLSPSALRAGL SLGVPLGDEDFD ++A+TDP R G+VSYP FCE L LH L +P A+ + RPSSAPP Q + Q XXXXXXXX RAMELAP D DL+GGVFH N AT GC+NPNFTTTMVPA + GGG R RRQ PAPAP T T V+ K+ GQT++ G +R +TG AERRFRQ LG K R +W D GGR RRGR PRDSDLGFGS RMRS S+ +D GRR D G GL R RS SLG E RYG+WARSSV LLR D WLG R
Sbjct: 52 NQATCSTAAGSPTRRDVPYDVGECIIHSAPPPVPPPRALELVKEEVHRALKAFSTKPVKGEPKAPLPSDLLRPFDVSKDGRVTYREFRTGILGLGIGLTAHEAEALAQVVDREGTGLVDRGPFEAAATRDWGSSGRDGGWQGRPTSAPGSVPGAVAEPQIGGGALHSPGEHTS-HPQVDDGS---IV--RDG---EKGYAGGEVLPPPPTPSEAPEPLRQWSRLETTGRPSRNRGPSTLSFDCWQQNANRRNESNNAADAVVAKTPASTGSSIGRSDGNVNGHHKHSRDTSTXXXXXXXXXXXXNSDYNTHNNNLQPSQKYLQSLQTLRSLLQRDGVFDEVKSTPIADETNKSNERSLSFGTEIRGRRRERRLQEQSQHQAGSRLSGGGGGDGKQRVDLSRVEHRRSREEDCRADSPXXXXXXXXXXXXXXXXXXXXXXXXSTGKTNVVVSDTEAP-DHLARAQAVAARAEKILQLRSRGDLVGLRRAVSKADPSASGVISRREMERVILRRFGTGLEDDEARHLAACYRKDFNGRSMVDYGRLFDNMEVQEGGVYGRGVTPSPGPSKSSGRGCWEDQQHSSSRDGGGGTRARSASVSAAGEXRRRGSRPMRAAAGGRTRHSQRRYWRRGVPDAADDNFVRGGAPAEASQLVRRARAKTLALLDRHGTRSVDCVFGLVDQAHTQTVNSGELREALRILGGSDTLSEIEHRALFKGISKGRDRIHYRDKTYPNTQRYSRGPAASVVATTCFIYTLFFGTPLVLHKQELLDTLRASEVAEHRERTQRKLQHQAGLPTSGRGSAIHWRHSDVLDWDAPPAGGGGRKGSRGVGLKGGRQHKESRRQALVFQRLRDGVKQIQEKQNSAWPVFDMFRQRG------------RARAGGYCDAAAXXXXXXXXXXXXTINNDDDPDRTPSPLSPSALRAGLGSLGVPLGDEDFDTLIAATDPDRRGKVSYPTFCEALDLHPLRGDPPDAHRTASGSEEEERPSSAPPVPTKSRQHNRQXXXXXXXXXXXXXXXXXXXXXXXXXGGYIRRRAMELAPPADAREDLEGGVFHVNEATCGCANPNFTTTMVPA---------STGGGCRANNNRPRPDSYRPKRRQSPAPAPGGTL--TGVRTKSHGQTLLVVGSGGGDRVGLRDQTGLEAERRFRQGLGIKMR-------------------------------------AWSDDNNT------GGRGH---RRGRSHTPRDSDLGFGSERMRSTSRCDDDEDCRGGGGRRERRSGSVGWRRTGTNGDVGPGLRRVRSLSLGAERRYGDWARSSVQHLLRQDGWLGAR 1301
BLAST of mRNA_M-pyrifera_M_contig7852.18452.1 vs. uniprot
Match: D8LB86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB86_ECTSI) HSP 1 Score: 626 bits (1615), Expect = 1.680e-199 Identity = 500/1269 (39.40%), Postives = 614/1269 (48.38%), Query Frame = 1
Query: 1 KVSTALDQIPQLMHALKS-NGRGSGIT--WSGRHDQVITQQERAQ-RNDGTISMPAGSPTRYDSPYNI-----HGASPPSPPPRALELVKEEVHRALHAFSTRPLKGATHPPAPRDLLRPYDTTRDGRITYVEFEAGLRGLGIGLTGGEAKVLALDVDSGDTGLVDREKFEAAAVGSWGRGTATVGAASAXXXXXXXXXXXXXVPPPTESFSAHADRDQGSRATIVSGREGGMNDKPYAGARGLPPPPSVAQK---IKDASNSYAAGK-SRG---SAMSFEQWHRRMTAEGDGKHSAKVPANNV--------------------------------------SVSGHGKAKGRARSVRERADSLNTLRFLL---RGQDPDSGSTVEGDTGNHGQWFESRDREYRNRXXXXXXXXXXXXXXERALPGAAGDGARGCGGASGGERRDRVGV--RKSLAPSERHAVGRGLYSATGSVSPGRGRKTGAASHLVDGDASASLQEQE------RAHKHAGRAESILRVRSRGDLVGLRRALSRADPSRSGVISQREMERVFLRRFGSSFSDDEARGLAARYGKEISGRAMVDYGRLFDNLEAKEAGLCGEATPRREQPSV---------EERGKHAGTTTPRAILPAPAGSRSNNRRTGC--------ARTVQN-------GDGDGSVRE-----APPEESQLARRARAKTLALLDLHGTRSVDKVFGLIDPGRAQTLTVEQLREGLRVLSGSDPLSDIEYKALFKAVGGKQGRIKHRELLDTLRDAEGVESRERTQRKLAYQARLPVSGRGSAVHWRHSDILDW-YPPAG--DEQSSSRV--PAGKQHKETRRRALVFEKIRERVRRVQDDRDSAGSVLDMFHRRGGG--GGXXXXKGEXXXXXXXXXXXXXXXXXXXXXXXQVLTARSEDGKYNPPPLSPSALRAGLISLGVPLGDEDFDAVLASTDPGRHGEVSYPDFCEVLRLHRLHDNPNGRKPGAAAAPGARRPSSAPPQLSSQAIGQGVAANG------------AVVASGEXXXXXXXXXXXRAMELAPAGD--HDLDGGVFHRNPATDGCSNPNFTTTMVPAWDDDGKGRGTWGGGGRCQG-----------RRQLPAPAPALTAACTVVQPKNRGQTVI-----GDNRFQPWIETGAGAERRFRQDLGAKARRHHRSHSLSCHGGELATCEGWNNLRTPPPHTAADGIESWRDTATAAVARGGGGRSRGISRRGRGLAPRDSDLGFGSARMRSAS 3414
+++ LDQIP+LMH L + N +G T S DQ +T++E+ + N T S AGSPT D PY+I H A PP PPPRALELVKEEVHRAL AFST+P+KG P P DLLRP+D ++DGR+TY E G+ GLGIGLT EA+ LA VD TGLVDR FEAAA WG G G X +ES + H+ + S + GR +K AG LPPPP+ ++ ++ S S G+ SR S +SF+ W + D ++A N S S + + ++ SL TLR LL R D + + +T + S E R R P CG G +R D V R+ R G+ S + + E RA A RAESILR+RSRGDLVGLRRA+S+ADPS SGVIS+REMERV LRRFG+ D EAR LAARY K+ +GR+MVDYGRLFD+LE KE L G PS ++R AP + RR G ART + G D + + AP EESQL RRARAKTLALLD HGT SVD VFGL+D QT++ +LRE LR+L GSD LS+IE++ALFK + + R+ +RELLDTLR +E E RERTQRKL +QA LP SGRGSA+HWRHSD+LDW PPAG D + S V G+QHKE+RR+ALVF+++R+ VR++Q+ ++SAG V DMF RRG G GG D PPPLSPSALRAGL SLGVPLG+EDF ++A+TDP R GEV+YP FCE L LH L +P+ A+ + RPS A A XX RAMELAP D DL+GGVFH N AT GC NPNFTTTMVPA + GGG + RRQ PAPAP T T ++ K+ GQT++ G +R +TG AERRFRQ LG K R G NN P V GG G +RRGR PRDSDLGFGS RMRS S
Sbjct: 43 EINGTLDQIPRLMHKLHNYNNERTGSTRVTSSYRDQYLTRKEQQRISNQVTCSTAAGSPTHRDVPYDIGEYIIHSAPPPVPPPRALELVKEEVHRALKAFSTQPVKGEPKAPLPSDLLRPFDVSKDGRVTYRELRTGILGLGIGLTAREAEELAQVVDREGTGLVDRGHFEAAATRDWGSGGGGDGGWQGRPTSAPGRVXGAVAESQSESGALHSPGEHASHPQVDDGRIAHDGEKGCAGGEVLPPPPTPSEAPEPLRQWSRSETTGRPSRNHGPSTLSFDYWQQNANRRNDSNNAANAVVTNTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPKSSNSDYNTHNNNQQLSQKYIQSLQTLRSLLQLDRVFDEVKSTPIADETNKPNRRSLSFGTETRGRRCERRRQEQSQHQ-SGLRPSGXXXXXXSCGVGDGKQRVDSTKVEHRRFREEDGRADSPXXXXXXXXXXXXXXXXXXXXXXXXXTGNTSVVVSDTEAPDHLARARSVAARAESILRLRSRGDLVGLRRAVSKADPSASGVISRREMERVILRRFGTGLEDHEARHLAARYRKDFNGRSMVDYGRLFDSLEVKEGDLFGRGVTSSPGPSTSSGRGCWEAQQRSSSXXXXXXXXARSAPTSTAGEGRRRGSRPMRAAAGARTRHSQRRYWRRGVPDAAAADFVRGGAPAEESQLVRRARAKTLALLDRHGTPSVDCVFGLVDQAHTQTVSSGELREALRILGGSDTLSEIEHRALFKGISKGRDRVLYRELLDTLRASEVAEHRERTQRKLQHQAGLPTSGRGSAIHWRHSDVLDWDAPPAGGGDRKGSCGVGLKGGRQHKESRRQALVFQRLRDGVRQIQEKQNSAGPVFDMFRRRGRGRTGGYSDAAATVAAPTTSGNGTMN---------------NDNDPVRTPPPLSPSALRAGLGSLGVPLGNEDFVTLIAATDPDRRGEVTYPTFCEALDLHPLRGDPSDAHRTASGSEEQERPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDAGKGRREGXXGYARRRAMELAPPADTREDLEGGVFHVNEATYGCDNPNFTTTMVPA---------SIGGGCKANNNHPRPDAYRPKRRQSPAPAPGGTL--TGIRTKSHGQTLLVVGSGGGDRVGLRDQTGLEAERRFRQGLGVKMR----------------AWSGDNNTDPTP------------------VLNGGRG-----NRRGRSHTPRDSDLGFGSERMRSTS 1245 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7852.18452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7852.18452.1 >prot_M-pyrifera_M_contig7852.18452.1 ID=prot_M-pyrifera_M_contig7852.18452.1|Name=mRNA_M-pyrifera_M_contig7852.18452.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1209bp KVSTALDQIPQLMHALKSNGRGSGITWSGRHDQVITQQERAQRNDGTISMback to top mRNA from alignment at M-pyrifera_M_contig7852:3687..10419+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7852.18452.1 ID=mRNA_M-pyrifera_M_contig7852.18452.1|Name=mRNA_M-pyrifera_M_contig7852.18452.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6733bp|location=Sequence derived from alignment at M-pyrifera_M_contig7852:3687..10419+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7852:3687..10419+ >mRNA_M-pyrifera_M_contig7852.18452.1 ID=mRNA_M-pyrifera_M_contig7852.18452.1|Name=mRNA_M-pyrifera_M_contig7852.18452.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=7254bp|location=Sequence derived from alignment at M-pyrifera_M_contig7852:3687..10419+ (Macrocystis pyrifera P11B4 male)back to top |