mRNA_M-pyrifera_M_contig78486.18444.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig78486.18444.1
Unique NamemRNA_M-pyrifera_M_contig78486.18444.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig78486.18444.1 vs. uniprot
Match: A0A2D5B282_9BACT (Glutamate--tRNA ligase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5B282_9BACT)

HSP 1 Score: 369 bits (947), Expect = 8.960e-123
Identity = 188/302 (62.25%), Postives = 222/302 (73.51%), Query Frame = 1
Query:    1 TYNFVVVVDDAHMEITHVLRGEEHLTNTPKQVLLYQALDLEPPLFGHLPLMLGTDGKKLSKRTGDTNVVDYLDSGYPPEAIVNFLALQGWALDGEHDLFTRDQLVAAFEPTDVSKGGSIFDVEKFQWMAGEYVRQDDPVRLAERCVPYVVEAGLATREELAARHDWFVDVVRAEQERFRLYSELPARIAYLFAPAEGLDWDPKAEKGARKHDGSADTLRAYAAWLA-------DQDAIGAELGAATKAWVQERGIKIPALFQPLRCALTGAPGGADLFDIIGLLGPELVQARLADAAQRMDA 885
            TYNFVVV DD  M ITHVLRGEEHLTNTPKQVLLY+AL LEPPLFGHLPLMLG D KKLSKRTGDT + DY   GYP EA+ NFLALQ WALD +  +F+RD+LVA F+P D+ KGGSIFD +K  W+AGEY+R      LAERC P+VVEAGLAT EEL  R DW++  +  EQER +LYS++P R+AYLFA    + +D KA K  RKHD +  TL  Y  W+A       D DA+GAE    +KAW+ ERG+KIPALFQPLRCAL+GA GGADLF I+ LLGPE V+ R+    +R+ A
Sbjct:  195 TYNFVVVCDDHDMRITHVLRGEEHLTNTPKQVLLYRALGLEPPLFGHLPLMLGKDKKKLSKRTGDTALQDYRRKGYPAEAMSNFLALQSWALDDKTTVFSRDELVANFDPKDLRKGGSIFDPDKCLWIAGEYIRAHSIEVLAERCTPFVVEAGLATAEELEVRRDWYLQALAMEQERIKLYSQMPGRLAYLFADDGDVSYDEKALKNVRKHDEATTTLADYLEWIAPKLVDGFDVDALGAE----SKAWISERGLKIPALFQPLRCALSGAAGGADLFGIMALLGPEKVRRRIECGIERLGA 492          
BLAST of mRNA_M-pyrifera_M_contig78486.18444.1 vs. uniprot
Match: A0A2E5X4V6_9BACT (Glutamate--tRNA ligase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X4V6_9BACT)

HSP 1 Score: 367 bits (942), Expect = 4.790e-122
Identity = 184/299 (61.54%), Postives = 224/299 (74.92%), Query Frame = 1
Query:    1 TYNFVVVVDDAHMEITHVLRGEEHLTNTPKQVLLYQALDLEPPLFGHLPLMLGTDGKKLSKRTGDTNVVDYLDSGYPPEAIVNFLALQGWALDGEHDLFTRDQLVAAFEPTDVSKGGSIFDVEKFQWMAGEYVRQDDPVRLAERCVPYVVEAGLATREELAARHDWFVDVVRAEQERFRLYSELPARIAYLFAPAEGLDWDPKAEKGARKHDGSADTLRAYAAWLADQDAIGAELGAA------TKAWVQERGIKIPALFQPLRCALTGAPGGADLFDIIGLLGPELVQARLADAAQRM 879
            TYNFVVV DDA MEI+HVLRGEEHL NTPKQ+LLYQAL+L  P FGHLPLMLG+ G+KLSKR G T++ DY + GYPPEAIVN+LALQGWALDGE ++F+ ++L AAF+P+ VSK G++FD +KF W+AGEY+R D   RLAERC P++  AGLAT EELA R DW+  VV  EQER RLYSELP R+AYLFA    L++ PKAEK AR+H+    TL A+A ++A     GA+L AA      TKAW+ ER +  PA  QP+RCALTG PGG DLF+ + LLG E   ARLA A +R+
Sbjct:  192 TYNFVVVCDDAAMEISHVLRGEEHLVNTPKQLLLYQALELPAPTFGHLPLMLGSGGRKLSKRDGHTSLGDYRELGYPPEAIVNYLALQGWALDGEREVFSVEELTAAFDPSKVSKAGAVFDQDKFLWLAGEYIRADSVTRLAERCAPFIAAAGLATEEELAERTDWWHSVVAQEQERIRLYSELPGRVAYLFAADAALEYSPKAEKNARRHESCTATLAAFAEFIAS---FGAQLPAADALAEATKAWMAERELPFPAFGQPVRCALTGMPGGPDLFETVALLGSERTLARLAAAQERL 487          
BLAST of mRNA_M-pyrifera_M_contig78486.18444.1 vs. uniprot
Match: A0A7C1WHI0_9BACT (Glutamate--tRNA ligase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1WHI0_9BACT)

HSP 1 Score: 365 bits (938), Expect = 1.810e-121
Identity = 184/299 (61.54%), Postives = 219/299 (73.24%), Query Frame = 1
Query:    1 TYNFVVVVDDAHMEITHVLRGEEHLTNTPKQVLLYQALDLEPPLFGHLPLMLGTDGKKLSKRTGDTNVVDYLDSGYPPEAIVNFLALQGWALDGEHDLFTRDQLVAAFEPTDVSKGGSIFDVEKFQWMAGEYVRQDDPVRLAERCVPYVVEAGLATREELAARHDWFVDVVRAEQERFRLYSELPARIAYLFAPAEGLDWDPKAEKGARKHDGSADTLRAYAAWLA------DQDAIGAELGAATKAWVQERGIKIPALFQPLRCALTGAPGGADLFDIIGLLGPELVQARLADAAQRM 879
            TYNF VV DD+HM ITHVLRGEEHLTNTPKQVLL++AL LEPP F HLPLMLG DGKKLSKRTGDT++ DY D GYP  A++NFL LQGW LD    +F+ D LV  F+P DV KGGS+FD +KF WMAGEY+R++    LA  C P+VV AGLAT EELA R +WF  V+  E+ER +LYSELPARIAYLF   + + +DPKAEK ARKH+G  + L  Y  WL       D DA+      ATKA+V ER ++ PALFQPLRCAL GA GGADLFD++ LLGPE V+ R+  A +R+
Sbjct:  193 TYNFCVVCDDSHMRITHVLRGEEHLTNTPKQVLLFEALGLEPPAFAHLPLMLGNDGKKLSKRTGDTSLQDYRDKGYPAAAVMNFLCLQGWGLDETTTIFSLDDLVRHFDPKDVRKGGSVFDPKKFLWMAGEYLRRESLEELATHCAPFVVAAGLATEEELAERAEWFRAVLATERERIQLYSELPARIAYLFQDDDAVVYDPKAEKNARKHEGRIELLETYLEWLRPRLDPLDVDAVRE----ATKAFVAERELRFPALFQPLRCALMGAAGGADLFDVMALLGPERVERRIRAAMERL 487          
BLAST of mRNA_M-pyrifera_M_contig78486.18444.1 vs. uniprot
Match: A0A2D5W773_9BACT (Glutamate--tRNA ligase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W773_9BACT)

HSP 1 Score: 347 bits (891), Expect = 7.180e-114
Identity = 180/320 (56.25%), Postives = 218/320 (68.12%), Query Frame = 1
Query:    1 TYNFVVVVDDAHMEITHVLRGEEHLTNTPKQVLLYQALDLEPPLFGHLPLMLGTDGKKLSKRTGDTNVVDYLDSGYPPEAIVNFLALQGWALDGEHDLFTRDQLVAAFEPTDVSKGGSIFDVEKFQWMAGEYVRQDDPVRLAERCVPYVVEAGLATREELAARHDWFVDVVRAEQERFRLYSELPARIAYLFAPAEGLDWDPKAEKGARKHDGSADTLRAYAAWLADQDAIG---------------------------AELGAATKAWVQERGIKIPALFQPLRCALTGAPGGADLFDIIGLLGPELVQARLADAAQRM 879
            TYNFVVV DD  M I+HVLRGEEHL NTPKQ+LLY+ALD  PPLFGHLPLMLG+ GKKLSKR G T+V DY D GYPPEA+VNFLALQGWALDGE ++F+  +L AAF+P  VSK G++FD +KF W+AGEY+R      LA+RC P+VV AGL T ++LA+R DW+  VV  EQER RLYSE+P R+AYLFA  E + + PKAEK AR+H+   DTL A+A ++A                                 AEL  ATKAW+ ER +  PA  QP+RCALTG PGG DLF+ + LLG +   ARLA A  R+
Sbjct:  204 TYNFVVVCDDLAMGISHVLRGEEHLVNTPKQLLLYEALDSAPPLFGHLPLMLGSGGKKLSKRDGHTSVGDYRDLGYPPEAVVNFLALQGWALDGEREVFSVAELQAAFDPRAVSKAGAVFDQDKFMWLAGEYIRAASVAELAQRCAPFVVAAGLTTADDLASRADWWRAVVAQEQERIRLYSEIPERVAYLFADDEAVPYAPKAEKNARRHESRLDTLAAFADFIASFGGXXXXXXXXXXXXDXXXXAAVAGGADLPAPAELSDATKAWMAERELPFPAFGQPVRCALTGLPGGPDLFETMVLLGSQKTLARLAAAGARL 523          
BLAST of mRNA_M-pyrifera_M_contig78486.18444.1 vs. uniprot
Match: A0A7Y5UT70_9PLAN (Glutamate--tRNA ligase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5UT70_9PLAN)

HSP 1 Score: 341 bits (875), Expect = 6.700e-112
Identity = 177/296 (59.80%), Postives = 208/296 (70.27%), Query Frame = 1
Query:    1 TYNFVVVVDDAHMEITHVLRGEEHLTNTPKQVLLYQALDLEPPLFGHLPLMLGTDGKKLSKRTGDTNVVDYLDSGYPPEAIVNFLALQGWALDGEHDLFTRDQLVAAFEPTDVSKGGSIFDVEKFQWMAGEYVRQDDPVRLAERCVPYVVEAGLATREELAARHDWFVDVVRAEQERFRLYSELPARIAYLFAPAEGLDWDPKAEKGARKHDGSADTLRAYAAWLADQDAIGAELGA---ATKAWVQERGIKIPALFQPLRCALTGAPGGADLFDIIGLLGPELVQARLADAAQRM 879
            TYNF VV DD  M ITHV RGEEHL NTPKQVLLYQAL    P FGHLPLMLGTDGKKLSKRTGDT + DY D GYP EA+VNFL LQGWALDG   LF+ DQLV  F+  DV K G+IFD EKF+WMAGEY+R++    LA  C P+VVEA LAT E+L+    WF +VV+ EQ R  +YSELPARIAYLF P + ++ +  A    RKH  +A TLR Y  WLA + A G +  A    +KAW  E+G+K+PA FQP+R AL+G   GADLFD++ LLG E V  RL  AA R+
Sbjct:  194 TYNFCVVCDDVDMGITHVFRGEEHLVNTPKQVLLYQALGQPMPEFGHLPLMLGTDGKKLSKRTGDTALQDYRDKGYPREAVVNFLCLQGWALDGTSVLFSVDQLVQHFDIKDVQKAGAIFDPEKFRWMAGEYLRKEPLATLAAHCTPFVVEAELATAEQLSENAKWFEEVVKTEQPRINIYSELPARIAYLFQPDDAVETNDAALAAVRKHANAAQTLRDYREWLAPKVAGGIDAAALRDTSKAWAAEKGLKLPAFFQPVRFALSGEVHGADLFDVMALLGAESVLRRLEAAANRL 489          
BLAST of mRNA_M-pyrifera_M_contig78486.18444.1 vs. uniprot
Match: A0A800G481_9BACT (Glutamate--tRNA ligase n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800G481_9BACT)

HSP 1 Score: 337 bits (865), Expect = 1.920e-110
Identity = 171/294 (58.16%), Postives = 210/294 (71.43%), Query Frame = 1
Query:    1 TYNFVVVVDDAHMEITHVLRGEEHLTNTPKQVLLYQALDLEPPLFGHLPLMLGTDGKKLSKRTGDTNVVDYLDSGYPPEAIVNFLALQGWALDGEHDLFTRDQLVAAFEPTDVSKGGSIFDVEKFQWMAGEYVRQDDPVRLAERCVPYVVEAGLATREELAARHDWFVDVVRAEQERFRLYSELPARIAYLFAPAEGLDWDPKAEKGARKHDGSADTLRAYAAWLADQDAIGA-ELGAATKAWVQERGIKIPALFQPLRCALTGAPGGADLFDIIGLLGPELVQARLADAAQRM 879
            TYNFVVV DDA M+ITHVLRGEEHL NTPKQVLLY AL ++ P+F HLPL+LG   KKLSKR G  ++ DY D GYP EAI+NFL +QGWALDGE D+F     V  F+  DVS+GG+IFD +KF W+AGEY+ ++    LAE C+P+VV  GL    +L AR DWF+ V+  E+ER R+YSELPAR+AYL A  + +++ PKAEKGARKH+  A TL  Y AWL +  +  A E   ATKAW+ ERG KIP LFQPLRCALTG PGG DLF+I+ LLG      R+    +R+
Sbjct:  194 TYNFVVVCDDADMDITHVLRGEEHLVNTPKQVLLYAALGVDAPIFAHLPLLLGKGRKKLSKRDGGVSLSDYRDQGYPREAILNFLCMQGWALDGETDVFDLATFVEHFDLADVSRGGAIFDFDKFLWLAGEYLHKEADEVLAEHCLPFVVGEGLFDEADLRARWDWFLRVIAMEKERIRIYSELPARMAYLAAQNDQVEYLPKAEKGARKHEDRAQTLTDYLAWLPEHCSDSASEQAEATKAWLVERGQKIPMLFQPLRCALTGLPGGPDLFEIMHLLGQAATLDRIRSGVERL 487          
BLAST of mRNA_M-pyrifera_M_contig78486.18444.1 vs. uniprot
Match: A0A800MFZ2_9BACT (Glutamate--tRNA ligase n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800MFZ2_9BACT)

HSP 1 Score: 338 bits (866), Expect = 5.010e-110
Identity = 169/288 (58.68%), Postives = 212/288 (73.61%), Query Frame = 1
Query:    1 TYNFVVVVDDAHMEITHVLRGEEHLTNTPKQVLLYQALDLEPPLFGHLPLMLGTDGKKLSKRTGDTNVVDYLDSGYPPEAIVNFLALQGWALDGEHDLFTRDQLVAAFEPTDVSKGGSIFDVEKFQWMAGEYVRQDDPVRLAERCVPYVVEAGLATREELAARHDWFVDVVRAEQERFRLYSELPARIAYLFAPAEGLDWDPKAEKGARKHDGSADTLRAYAAWLADQDAIG--AELGAATKAWVQERGIKIPALFQPLRCALTGAPGGADLFDIIGLLGPELVQARL 858
            TYNF VV DD  M IT VLRGEEHL NTPKQ+LLY+AL  EPP FGHLPL+LG D +KLSKRTGDT++ DY   GYP  AI+NFLALQGWALDGE ++F+ +  V  F+P  VSKGG+IFD +KF W+AGEY+R + P  LAE C+P+V+  GLA+++EL  R DWFV +++A QER  LYS+ P  +A  F  A+ L ++ KAEKGARKH+G+ D L A+AAWL ++ A    A  GAA + W+++RG KI +LFQPLRCALTG PGG DLF II LLG +    R+
Sbjct:  237 TYNFTVVSDDMAMGITCVLRGEEHLVNTPKQLLLYEALGSEPPAFGHLPLLLGKDRRKLSKRTGDTSLGDYRAKGYPRGAILNFLALQGWALDGETEVFSMETFVEHFDPAQVSKGGAIFDPDKFLWLAGEYLRAESPADLAEHCLPFVLSEGLASQDELRGRWDWFVQLIQAVQERLSLYSDAPKWLAPYFVGAQDLVYETKAEKGARKHEGAGDLLMAFAAWLGERPASEDPALTGAAARQWLEDRGAKIGSLFQPLRCALTGQPGGPDLFLIISLLGRQEALLRI 524          
BLAST of mRNA_M-pyrifera_M_contig78486.18444.1 vs. uniprot
Match: A0A521JV76_9BACT (Glutamate--tRNA ligase (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521JV76_9BACT)

HSP 1 Score: 325 bits (833), Expect = 3.970e-107
Identity = 167/296 (56.42%), Postives = 206/296 (69.59%), Query Frame = 1
Query:    4 YNFVVVVDDAHMEITHVLRGEEHLTNTPKQVLLYQALDLEPPLFGHLPLMLGTDGKKLSKRTGDTNVVDYLDSGYPPEAIVNFLALQGWALDGEHDLFTRDQLVAAFEPTDVSKGGSIFDVEKFQWMAGEYVRQDDPVRLAERCVPYVVEAGLATREELAARHDWFVDVVRAEQERFRLYSELPARIAYLFAPAEGLDWDPKAEKGARKHDGSADTLRAYAAWL----ADQDAIGAELGAATKAWVQERGIKIPALFQPLRCALTGAPGGADLFDIIGLLGPELVQARLADAAQRM 879
            YNF VV DD  M+ITHVLRGEEHLTNTPKQ+LLYQAL L  P FGHLPLMLGTDGKKLSKRTGDT + DY + GYP  AIVNFL LQGWALDG+ ++FT D+LV  F+PT VSK G++FD +KF+WMAGEY+R++   +L E C PY+V +GL ++ ELA++  W +  +  E++R  +Y+ELP R+ ++FA    + +   A    RK      TL AY  WL    AD+ A  A L  ATKAWV ER +K+PALFQPLRCALTG  GG DLFD I L+G E    R+     RM
Sbjct:   81 YNFAVVCDDVDMKITHVLRGEEHLTNTPKQILLYQALGLPFPTFGHLPLMLGTDGKKLSKRTGDTALQDYREKGYPKAAIVNFLCLQGWALDGKTEVFTVDELVKHFDPTQVSKAGAVFDQDKFRWMAGEYLRKEPLEQLFEHCAPYLVASGLVSQAELASKRAWLLQALALEKDRLHIYAELPERLKWMFADDRAIAYAEAALANVRKQADWKGTLSAYLEWLRPKLADRVAKDA-LRDATKAWVAERKLKMPALFQPLRCALTGEAGGPDLFDAIELIGSERALVRIESGLARM 375          
BLAST of mRNA_M-pyrifera_M_contig78486.18444.1 vs. uniprot
Match: A0A7C8CTM2_9BACT (Glutamate--tRNA ligase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8CTM2_9BACT)

HSP 1 Score: 326 bits (836), Expect = 5.740e-106
Identity = 162/296 (54.73%), Postives = 204/296 (68.92%), Query Frame = 1
Query:    1 TYNFVVVVDDAHMEITHVLRGEEHLTNTPKQVLLYQALDLEPPLFGHLPLMLGTDGKKLSKRTGDTNVVDYLDSGYPPEAIVNFLALQGWALDGEHDLFTRDQLVAAFEPTDVSKGGSIFDVEKFQWMAGEYVRQDDPVRLAERCVPYVVEAGLATREELAARHDWFVDVVRAEQERFRLYSELPARIAYLFAPAEGLDWDPKAEKGARKHDGSADTLRAYAAWLADQDAIGAE---LGAATKAWVQERGIKIPALFQPLRCALTGAPGGADLFDIIGLLGPELVQARLADAAQRM 879
            TYNFVVV DDA MEI+HV RGEEHL NTPKQ+L+Y+AL LEPP FGHLPLMLG DG+KLSKR G  ++  Y+  GY  +A+VNFL  QGWALDGE ++F+ +Q +A+F+P DVS+ G++FD +K +WM+GEY+  + P  LA  C P++  AGL T EEL  R DW+ + +   QER RLYSE+P  + +LFA    L++D KAEK ARKH      L AY   L     +G +   L    KAWV ER +K P LFQPLRCALTGA GG DLF ++ LLGPE   ARLA   +R+
Sbjct:  200 TYNFVVVCDDAAMEISHVFRGEEHLVNTPKQILVYRALGLEPPAFGHLPLMLGQDGRKLSKRHGAVSLSKYIAEGYSRDALVNFLCRQGWALDGETEIFSVEQFIASFDPGDVSRAGAVFDFDKLRWMSGEYIHAESPDELALHCAPHMTAAGLMTAEELVQRGDWYREALCLGQERVRLYSEMPGVLGFLFAADASLEYDAKAEKNARKHSERVAELSAYHEHLHPMIELGVDAEVLRDDAKAWVAERNLKFPQLFQPLRCALTGAAGGPDLFSVMALLGPEASLARLAAGIERL 495          
BLAST of mRNA_M-pyrifera_M_contig78486.18444.1 vs. uniprot
Match: A0A2D6HBL8_9BACT (Glutamate--tRNA ligase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HBL8_9BACT)

HSP 1 Score: 322 bits (826), Expect = 2.940e-104
Identity = 167/298 (56.04%), Postives = 200/298 (67.11%), Query Frame = 1
Query:    1 TYNFVVVVDDAHMEITHVLRGEEHLTNTPKQVLLYQALDLEPPLFGHLPLMLGTDGKKLSKRTGDTNVVDYLDSGYPPEAIVNFLALQGWALDGEHDLFTRDQLVAAFEPTDVSKGGSIFDVEKFQWMAGEYVRQDDPVRLAERCVPYVVEAGLATREELAARHDWFVDVVRAEQERFRLYSELPARIAYLFAPAEGLDWDPKAEKGARKHDGSADTLRAYAAWLADQDAIGAELGA---ATKAWVQERGIKIPALFQPLRCALTGAPGGADLFDIIGLLGPELVQARLADAAQRMDA 885
            TYNFVVV DDA MEI+HV+RGEEHL NTPKQV L+ ALD  PP F HLPLMLG D KKLSKR GD ++ DY   GYP  AI+NFLALQGWALDGE ++F+  + V AF   DVSKGG++FD +KF+W+AGEY+R + P  LA  C P+   AGL    +L  R +WF  VV  E+ER  LYSELP RIAYLFA  + + W+ KAEK ARK  G+   L  Y  WL  +   G +  A   AT+AW+ ERG     LFQPLRCAL G  GG DLFDI+  LG E    R+A A +R+ A
Sbjct:  211 TYNFVVVCDDAAMEISHVVRGEEHLVNTPKQVQLFAALDSRPPRFAHLPLMLGGDRKKLSKRAGDVSLEDYRAKGYPTGAILNFLALQGWALDGETEVFSTRRFVEAFRLEDVSKGGAVFDADKFRWLAGEYLRAESPADLAGHCAPFAAAAGLLDERQLTERAEWFEAVVAGERERISLYSELPDRIAYLFAADDAVAWEAKAEKNARKQGGA--LLAEYLEWLRPRLTGGVDAPALREATRAWIAERGAAFGVLFQPLRCALAGKAGGPDLFDIMAWLGGEACLRRIAVAIERLAA 506          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78486.18444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D5B282_9BACT8.960e-12362.25Glutamate--tRNA ligase n=1 Tax=Planctomycetes bact... [more]
A0A2E5X4V6_9BACT4.790e-12261.54Glutamate--tRNA ligase n=1 Tax=Planctomycetes bact... [more]
A0A7C1WHI0_9BACT1.810e-12161.54Glutamate--tRNA ligase n=1 Tax=Planctomycetes bact... [more]
A0A2D5W773_9BACT7.180e-11456.25Glutamate--tRNA ligase n=1 Tax=Planctomycetes bact... [more]
A0A7Y5UT70_9PLAN6.700e-11259.80Glutamate--tRNA ligase n=1 Tax=Planctomycetaceae b... [more]
A0A800G481_9BACT1.920e-11058.16Glutamate--tRNA ligase n=2 Tax=Planctomycetes bact... [more]
A0A800MFZ2_9BACT5.010e-11058.68Glutamate--tRNA ligase n=2 Tax=Planctomycetes bact... [more]
A0A521JV76_9BACT3.970e-10756.42Glutamate--tRNA ligase (Fragment) n=1 Tax=Planctom... [more]
A0A7C8CTM2_9BACT5.740e-10654.73Glutamate--tRNA ligase n=1 Tax=Planctomycetes bact... [more]
A0A2D6HBL8_9BACT2.940e-10456.04Glutamate--tRNA ligase n=1 Tax=Planctomycetes bact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78486contigM-pyrifera_M_contig78486:89..985 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score216.1
Seed ortholog evalue2.3e-53
Seed eggNOG ortholog429009.Adeg_0526
Preferred namegltX
KEGG rclassRC00055,RC00523
KEGG koko:K01885
KEGG ReactionR05578
KEGG Pathwayko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120
KEGG ModuleM00121,M00359,M00360
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
EggNOG OGs1TPJC@1239,2482P@186801,42ETH@68295,COG0008@1,COG0008@2
EC6.1.1.17
COG Functional cat.J
Best tax levelThermoanaerobacterales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016
Exons1
Model size897
Cds size897
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816687.1156435-CDS-M-pyrifera_M_contig78486:88..9851622816687.1156435-CDS-M-pyrifera_M_contig78486:88..985Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78486 89..985 -
1692278119.8004346-CDS-M-pyrifera_M_contig78486:88..9851692278119.8004346-CDS-M-pyrifera_M_contig78486:88..985Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78486 89..985 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78486.18444.1prot_M-pyrifera_M_contig78486.18444.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig78486 89..985 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig78486.18444.1

>prot_M-pyrifera_M_contig78486.18444.1 ID=prot_M-pyrifera_M_contig78486.18444.1|Name=mRNA_M-pyrifera_M_contig78486.18444.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=299bp
TYNFVVVVDDAHMEITHVLRGEEHLTNTPKQVLLYQALDLEPPLFGHLPL
MLGTDGKKLSKRTGDTNVVDYLDSGYPPEAIVNFLALQGWALDGEHDLFT
RDQLVAAFEPTDVSKGGSIFDVEKFQWMAGEYVRQDDPVRLAERCVPYVV
EAGLATREELAARHDWFVDVVRAEQERFRLYSELPARIAYLFAPAEGLDW
DPKAEKGARKHDGSADTLRAYAAWLADQDAIGAELGAATKAWVQERGIKI
PALFQPLRCALTGAPGGADLFDIIGLLGPELVQARLADAAQRMDAPAD*
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mRNA from alignment at M-pyrifera_M_contig78486:89..985-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig78486.18444.1 ID=mRNA_M-pyrifera_M_contig78486.18444.1|Name=mRNA_M-pyrifera_M_contig78486.18444.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=897bp|location=Sequence derived from alignment at M-pyrifera_M_contig78486:89..985- (Macrocystis pyrifera P11B4 male)
ACCTACAACTTCGTGGTCGTGGTCGACGACGCGCACATGGAGATCACGCA CGTGCTGCGCGGCGAGGAGCACCTGACGAACACGCCCAAGCAGGTGCTGC TCTACCAAGCGCTGGACCTCGAGCCGCCGCTGTTCGGGCACCTGCCCTTG ATGCTCGGCACCGACGGCAAGAAGCTCAGCAAGCGCACCGGCGACACGAA CGTCGTCGACTACCTCGACAGCGGCTACCCGCCCGAGGCGATCGTCAACT TCCTCGCGCTGCAGGGCTGGGCGCTCGACGGCGAGCACGATCTGTTCACC CGCGACCAGCTCGTCGCGGCCTTCGAGCCGACCGACGTGTCCAAGGGCGG CAGCATCTTCGACGTCGAGAAGTTCCAGTGGATGGCCGGCGAGTACGTGC GCCAGGACGATCCGGTGCGGCTCGCCGAGCGCTGTGTGCCGTACGTCGTC GAGGCGGGGCTCGCGACCCGCGAGGAGCTCGCGGCGCGCCACGACTGGTT CGTCGACGTGGTGCGCGCCGAGCAGGAGCGCTTTCGGCTCTACTCCGAGC TGCCTGCGCGGATCGCGTACCTGTTCGCGCCCGCGGAGGGGCTCGACTGG GACCCCAAGGCGGAGAAGGGCGCGCGCAAGCACGACGGCTCCGCCGACAC GCTGCGCGCGTACGCCGCGTGGCTCGCGGACCAGGACGCGATCGGCGCCG AGCTCGGCGCGGCGACCAAGGCGTGGGTCCAGGAGCGCGGGATCAAGATC CCGGCGCTGTTCCAGCCGCTGCGTTGTGCGCTGACCGGCGCGCCGGGCGG CGCGGACCTGTTCGACATCATCGGGCTGCTCGGGCCGGAGTTGGTCCAGG CGCGGCTCGCGGATGCGGCGCAGCGCATGGACGCGCCGGCGGACTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig78486:89..985-

>mRNA_M-pyrifera_M_contig78486.18444.1 ID=mRNA_M-pyrifera_M_contig78486.18444.1|Name=mRNA_M-pyrifera_M_contig78486.18444.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1794bp|location=Sequence derived from alignment at M-pyrifera_M_contig78486:89..985- (Macrocystis pyrifera P11B4 male)
ACCTACAACTTCGTGGTCGTGGTCGACGACGCGCACATGGAGATCACGCA
CGTGCTGCGCGGCGAGGAGCACCTGACGAACACGCCCAAGCAGGTGCTGC
TCTACCAAGCGCTGGACCTCGAGCCGCCGCTGTTCGGGCACCTGCCCTTG
ATGCTCGGCACCGACGGCAAGAAGCTCAGCAAGCGCACCGGCGACACGAA
CGTCGTCGACTACCTCGACAGCGGCTACCCGCCCGAGGCGATCGTCAACT
TCCTCGCGCTGCAGGGCTGGGCGCTCGACGGCGAGCACGATCTGTTCACC
CGCGACCAGCTCGTCGCGGCCTTCGAGCCGACCGACGTGTCCAAGGGCGG
CAGCATCTTCGACGTCGAGAAGTTCCAGTGGATGGCCGGCGAGTACGTGC
GCCAGGACGATCCGGTGCGGCTCGCCGAGCGCTGTGTGCCGTACGTCGTC
GAGGCGGGGCTCGCGACCCGCGAGGAGCTCGCGGCGCGCCACGACTGGTT
CGTCGACGTGGTGCGCGCCGAGCAGGAGCGCTTTCGGCTCTACTCCGAGC
TGCCTGCGCGGATCGCGTACCTGTTCGCGCCCGCGGAGGGGCTCGACTGG
GACCCCAAGGCGGAGAAGGGCGCGCGCAAGCACGACGGCTCCGCCGACAC
GCTGCGCGCGTACGCCGCGTGGCTCGCGGACCAGGACGCGATCGGCGCCG
AGCTCGGCGCGGCGACCAAGGCGTGGGTCCAGGAGCGCGGGATCAAGATC
CCGGCGCTGTTCCAGCCGCTGCGTTGTGCGCTGACCGGCGCGCCGGGCGG
CGCGGACCTGTTCGACATCATCGGGCTGCTCGGGCCGGAGTTGGTCCAGG
CGCGGCTCGCGGATGCGGCGCAGCGCATGGACGCGCCGGCGGACTGAACC
TACAACTTCGTGGTCGTGGTCGACGACGCGCACATGGAGATCACGCACGT
GCTGCGCGGCGAGGAGCACCTGACGAACACGCCCAAGCAGGTGCTGCTCT
ACCAAGCGCTGGACCTCGAGCCGCCGCTGTTCGGGCACCTGCCCTTGATG
CTCGGCACCGACGGCAAGAAGCTCAGCAAGCGCACCGGCGACACGAACGT
CGTCGACTACCTCGACAGCGGCTACCCGCCCGAGGCGATCGTCAACTTCC
TCGCGCTGCAGGGCTGGGCGCTCGACGGCGAGCACGATCTGTTCACCCGC
GACCAGCTCGTCGCGGCCTTCGAGCCGACCGACGTGTCCAAGGGCGGCAG
CATCTTCGACGTCGAGAAGTTCCAGTGGATGGCCGGCGAGTACGTGCGCC
AGGACGATCCGGTGCGGCTCGCCGAGCGCTGTGTGCCGTACGTCGTCGAG
GCGGGGCTCGCGACCCGCGAGGAGCTCGCGGCGCGCCACGACTGGTTCGT
CGACGTGGTGCGCGCCGAGCAGGAGCGCTTTCGGCTCTACTCCGAGCTGC
CTGCGCGGATCGCGTACCTGTTCGCGCCCGCGGAGGGGCTCGACTGGGAC
CCCAAGGCGGAGAAGGGCGCGCGCAAGCACGACGGCTCCGCCGACACGCT
GCGCGCGTACGCCGCGTGGCTCGCGGACCAGGACGCGATCGGCGCCGAGC
TCGGCGCGGCGACCAAGGCGTGGGTCCAGGAGCGCGGGATCAAGATCCCG
GCGCTGTTCCAGCCGCTGCGTTGTGCGCTGACCGGCGCGCCGGGCGGCGC
GGACCTGTTCGACATCATCGGGCTGCTCGGGCCGGAGTTGGTCCAGGCGC
GGCTCGCGGATGCGGCGCAGCGCATGGACGCGCCGGCGGACTGA
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