mRNA_M-pyrifera_M_contig78443.18437.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78443.18437.1 vs. uniprot
Match: A0A813C434_9DINO (Ift172 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C434_9DINO) HSP 1 Score: 149 bits (375), Expect = 1.930e-42 Identity = 75/148 (50.68%), Postives = 95/148 (64.19%), Query Frame = 1 Query: 1 AFVFLNRSIDLA----EAIEDG--------DMAGLDNTDFAGLDVPPPAAMQLPDTHWLDAERREEVKGWVLEKSIDGRIGQTLEAGDVPTAAQASLPKCIASGFPVPPGDQVQCPSCSSRAIRAAWNALVAKASKCPWCASSASPFY 408 AFV LNR +DLA EA E+ D A LDN+DF G +VP P + +P T WL REEV+ WVL S+D + Q L G VP AQ+S PKCI +G+PVPP V+CPSC S AI++AWNA+V K +CPWC+++ASP Y Sbjct: 83 AFVMLNRYVDLADLLAEAAEEAGPGGEPRPDFAELDNSDFHGTEVPAPGSFPVPSTQWLGGSAREEVRDWVLAISMDQAVAQELPKGSVPLLAQSSQPKCIVTGYPVPPDRLVKCPSCGSNAIKSAWNAVVLKTKECPWCSAAASPAY 230
BLAST of mRNA_M-pyrifera_M_contig78443.18437.1 vs. uniprot
Match: A0A812M3C6_9DINO (Ift172 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812M3C6_9DINO) HSP 1 Score: 156 bits (395), Expect = 1.300e-41 Identity = 73/136 (53.68%), Postives = 90/136 (66.18%), Query Frame = 1 Query: 1 AFVFLNRSIDLAEAIEDGDMAGLDNTDFAGLDVPPPAAMQLPDTHWLDAERREEVKGWVLEKSIDGRIGQTLEAGDVPTAAQASLPKCIASGFPVPPGDQVQCPSCSSRAIRAAWNALVAKASKCPWCASSASPFY 408 A+V LNR +DL EAIE+GD +DNTDF G D+P P LP HWL + EE + WVL S+D + QTL GD+PTA QAS +C +G PV D+V C SCSS AIR AWNA+VAK CPWC++ +PFY Sbjct: 1269 AYVMLNRFLDLFEAIEEGDANDIDNTDFEGTDIPSPLDFPLPAAHWLSEDETEEARKWVLSASVDKTVAQTLSHGDLPTAEQASQSRCAITGLPVSAADRVACTSCSSVAIRRAWNAIVAKTGACPWCSAHQAPFY 1404
BLAST of mRNA_M-pyrifera_M_contig78443.18437.1 vs. uniprot
Match: A0A5A8DM00_CAFRO (Hypothetical protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DM00_CAFRO) HSP 1 Score: 156 bits (395), Expect = 1.320e-41 Identity = 73/136 (53.68%), Postives = 90/136 (66.18%), Query Frame = 1 Query: 1 AFVFLNRSIDLAEAIEDGDMAGLDNTDFAGLDVPPPAAMQLPDTHWLDAERREEVKGWVLEKSIDGRIGQTLEAGDVPTAAQASLPKCIASGFPVPPGDQVQCPSCSSRAIRAAWNALVAKASKCPWCASSASPFY 408 A+V LNR +DL EAIE+GD +DNTDF G D+P P LP HWL + EE + WVL S+D + QTL GD+PTA QAS +C +G PV D+V C SCSS AIR AWNA+VAK CPWC++ +PFY Sbjct: 1696 AYVMLNRFLDLFEAIEEGDANDIDNTDFEGTDIPSPLDFPLPAAHWLSEDETEEARKWVLSASVDKTVAQTLSHGDLPTAEQASQSRCAITGLPVSAADRVACTSCSSVAIRRAWNAIVAKTGACPWCSAHQAPFY 1831
BLAST of mRNA_M-pyrifera_M_contig78443.18437.1 vs. uniprot
Match: A0A6A7GC78_9CRUS (Uncharacterized protein (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GC78_9CRUS) HSP 1 Score: 103 bits (258), Expect = 2.040e-25 Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = 1 Query: 1 AFVFLNRSIDLAEAIEDGDMAGLDNTDFAGLDVPPPAAMQLPDTHWLDAERREEVKGWVLEKSIDGRIGQ-------------TLEAGDVPTAAQASLPKCIASGFPVPPGDQVQCPSCSSRAIRAAWNALVAKASKCPWCASSASPFY 408 AF+FLNR +D+ +AI++ + LDN+DF D+PPP +Q+P H + REE++ VLE ++ + Q T +A V CI +GFPV D+VQC +C A ++ WN V K CPWC +P Y Sbjct: 30 AFIFLNRFVDVCDAIDEPNSGDLDNSDFVDTDIPPPHMVQIPTEHSYPEDSREEIRELVLETAVCAEVDQELPTRRCDSCHEETYDAAVVCHLCDNESDACIVTGFPVSANDRVQCKNCCKFANKSDWNKFVMKVKTCPWCGCIQNPVY 178
BLAST of mRNA_M-pyrifera_M_contig78443.18437.1 vs. uniprot
Match: A0A8K1FJC7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJC7_PYTOL) HSP 1 Score: 105 bits (262), Expect = 1.080e-23 Identity = 60/148 (40.54%), Postives = 79/148 (53.38%), Query Frame = 1 Query: 1 AFVFLNRSIDLAEAIEDGDMAGLDNTDFAGLDVPPPAAMQLPDTHWL-DAERREEVKGWVLEKSIDGRI---------GQ--------TLEAGDVPTAAQASLPKCIASGFPVPPGDQVQCPSCSSRAIRAAWNALVAKASKCPWCAS 390 AFVF NR +D+ EAIEDGDM LDNTDF G D+P P LP++ +L D REE++ WVL S+D ++ GQ +L+ G+ T +A CI +GFPV C +C R WN V + CPWCA+ Sbjct: 1648 AFVFFNRYLDICEAIEDGDMTNLDNTDFLGTDIPSPTEFILPESQYLADESAREEIRDWVLTISMDQQVQEKLPEKPCGQCKASIYEASLQCGECKTRFEA----CIITGFPVGAKSTAHCTTCKVIGDRETWNKWVKQFGSCPWCAA 1791
BLAST of mRNA_M-pyrifera_M_contig78443.18437.1 vs. uniprot
Match: A0A2P6NVW6_9EUKA (Intraflagellar transport protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NVW6_9EUKA) HSP 1 Score: 104 bits (260), Expect = 2.010e-23 Identity = 55/148 (37.16%), Postives = 81/148 (54.73%), Query Frame = 1 Query: 1 AFVFLNRSIDLAEAIEDGDMAGLDNTDFAGLDVPPPAAMQLPDTHWLDAERREEVKGWVLEKSI------------DGRIGQTLEAGDVPTAAQASLPKCIASGFPVPPGDQVQCPSCSSRAIRAAWNALVAKASKCPWCASSASPFY 408 A+ +LNR +D++E +E+ + L+NT F D+P + LP +H+LD E+RE+ K WVL+ S+ DG + EA A A CI SG+PV +++QC SC+ A R WN +AK +CPWC + SP Y Sbjct: 1566 AYNYLNRFVDISEELEEEEPTVLENTGFENTDIP--FDLPLPTSHYLDEEKREDAKNWVLQASLTNQEYVLSKRNCDGCSSEIYEASSWCYACSAETEVCIVSGYPVLRSNKIQCTSCTKSANREDWNKYIAKMRQCPWCNTPQSPSY 1711
BLAST of mRNA_M-pyrifera_M_contig78443.18437.1 vs. uniprot
Match: A0A0G4FWR3_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FWR3_9ALVE) HSP 1 Score: 102 bits (255), Expect = 9.490e-23 Identity = 55/146 (37.67%), Postives = 77/146 (52.74%), Query Frame = 1 Query: 1 AFVFLNRSIDLAEAIEDGDMAGLDNTDFAGLDVPPPAAMQLPDTHWLDAERREEVKGWVLEKSIDGRIGQTLE-------AGDVPTAAQASLP-------KCIASGFPVPPGDQVQCPSCSSRAIRAAWNALVAKASKCPWCASSA 396 AF+FLNR +D+A+AIED D A +DN DF D+P P ++LP+++ +D E RE+ K VL +D + E G+ A + P CI +GFPV +++C SC S A WN V +CPWC S A Sbjct: 1674 AFLFLNRFLDIADAIEDPDTAQIDNADFKDTDIPSPFEVELPESNAIDKETREQTKNLVLNWGVDSSVSDAKERTSRCDNCGEEVYEAACTCPVCKHESDPCIVTGFPVKKQTRMECRSCGSAANSPDWNVFVRSTGQCPWCGSQA 1819
BLAST of mRNA_M-pyrifera_M_contig78443.18437.1 vs. uniprot
Match: A0A813CYA0_9DINO (Ift172 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813CYA0_9DINO) HSP 1 Score: 100 bits (249), Expect = 2.730e-22 Identity = 57/150 (38.00%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 1 AFVFLNRSIDLAEAIEDGDMAGLDNTDFAGLDVPPPAAMQLPDTHWLDAERREEVKGWVLEKSIDGRIGQTLE--------------AGDVPTAAQASLPKCIASGFPVPPGDQVQCPSCSSRAIRAAWNALVAKASKCPWCASSASPFY 408 +F FLNR +D+A+AIED D A +DNTDF D+P P + LP+ + ++ EE++ WVL S+D + Q ++ A P S P CI SGFPV +V+C C S A R WN V +CPWC+S + Y Sbjct: 277 SFFFLNRFLDIADAIEDPDNAAIDNTDFMETDIPSPYDLDLPEQAHISNDKVEEIRDWVLGWSMDQNVQQKMDLRPCDKCGAHIYTGAATCPHCGTVSEP-CIISGFPVLKKTRVECTVCHSAANRDDWNIWVQMFKECPWCSSPQNAQY 425
BLAST of mRNA_M-pyrifera_M_contig78443.18437.1 vs. uniprot
Match: A0A812RJJ0_SYMMI (IFT172 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RJJ0_SYMMI) HSP 1 Score: 100 bits (249), Expect = 5.850e-22 Identity = 57/150 (38.00%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 1 AFVFLNRSIDLAEAIEDGDMAGLDNTDFAGLDVPPPAAMQLPDTHWLDAERREEVKGWVLEKSIDGRIGQTLE--------------AGDVPTAAQASLPKCIASGFPVPPGDQVQCPSCSSRAIRAAWNALVAKASKCPWCASSASPFY 408 +F FLNR +D+A+AIED D A +DNTDF D+P P + LP+ + ++ EE++ WVL S+D + Q ++ A P S P CI SGFPV +V+C C S A R WN V +CPWC+S + Y Sbjct: 804 SFFFLNRFLDIADAIEDPDNAAIDNTDFMETDIPSPYDLDLPEQAHISNDKVEEIRDWVLGWSMDQNVQQKMDLRPCDKCGAHIYTGAATCPHCGTVSEP-CIISGFPVLKKTRVECTVCHSAANRDDWNIWVQMFKECPWCSSPQNAQY 952
BLAST of mRNA_M-pyrifera_M_contig78443.18437.1 vs. uniprot
Match: A0A1Q9DKF3_SYMMI (Intraflagellar transport protein 172-like n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DKF3_SYMMI) HSP 1 Score: 100 bits (249), Expect = 5.960e-22 Identity = 57/150 (38.00%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 1 AFVFLNRSIDLAEAIEDGDMAGLDNTDFAGLDVPPPAAMQLPDTHWLDAERREEVKGWVLEKSIDGRIGQTLE--------------AGDVPTAAQASLPKCIASGFPVPPGDQVQCPSCSSRAIRAAWNALVAKASKCPWCASSASPFY 408 +F FLNR +D+A+AIED D A +DNTDF D+P P + LP+ + ++ EE++ WVL S+D + Q ++ A P S P CI SGFPV +V+C C S A R WN V +CPWC+S + Y Sbjct: 1055 SFFFLNRFLDIADAIEDPDNAAIDNTDFMETDIPSPYDLDLPEQAHISNDKVEEIRDWVLGWSMDQNVQQKMDLRPCDKCGAHIYTGAATCPHCGTVSEP-CIISGFPVLKKTRVECTVCHSAANRDDWNIWVQMFKECPWCSSPQNAQY 1203 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78443.18437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78443.18437.1 >prot_M-pyrifera_M_contig78443.18437.1 ID=prot_M-pyrifera_M_contig78443.18437.1|Name=mRNA_M-pyrifera_M_contig78443.18437.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp AFVFLNRSIDLAEAIEDGDMAGLDNTDFAGLDVPPPAAMQLPDTHWLDAEback to top mRNA from alignment at M-pyrifera_M_contig78443:11..421+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78443.18437.1 ID=mRNA_M-pyrifera_M_contig78443.18437.1|Name=mRNA_M-pyrifera_M_contig78443.18437.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=411bp|location=Sequence derived from alignment at M-pyrifera_M_contig78443:11..421+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78443:11..421+ >mRNA_M-pyrifera_M_contig78443.18437.1 ID=mRNA_M-pyrifera_M_contig78443.18437.1|Name=mRNA_M-pyrifera_M_contig78443.18437.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig78443:11..421+ (Macrocystis pyrifera P11B4 male)back to top |