mRNA_M-pyrifera_M_contig78435.18435.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78435.18435.1 vs. uniprot
Match: A0A2D9C5I5_9BACT (Uncharacterized protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D9C5I5_9BACT) HSP 1 Score: 181 bits (459), Expect = 5.360e-48 Identity = 111/254 (43.70%), Postives = 151/254 (59.45%), Query Frame = 1 Query: 118 ESIIEAYTTLAMPDVLEQSTAVNAALRGNP---STSELALARPVDDWLNSMLFDGDEGQRQAAFDAYAS--------RADIVAAELSDAIDLPLAGHSLLKWTLAELRNLRDNAESLVIADTYLIE-NGSATIPQEDGVLANDIDQEYRNIIVDLAYELDPEYVAPQHGTLSLNADGSFSYQADPGFVGIDRFSYRSTTIVTGSRDEAFSKPTSVVLLVEESSSCSPADFTAD-GVLDIFDVLAFVNLFNAEDP 840 ES+I+AY TL MP +++S + AALRG P + EL + L + +F D A + AS R DI+ E+ + P A + W LAEL +LR A L DTY NGS + DG+L+ND+ QEY +++VDL+YE DPEYVAP+HG +++NADGSFSYQADPGFVG D F+YRSTT V G+ + +S P +V++ V + +C+ AD G L+ FDV AF+ FNA DP Sbjct: 912 ESLIDAYVTLGMPLEMQESEVLRAALRGTPDLVTPRELGIRSGDVFGLVADMFTNDTTSDWADPGSDASQIGTLLRDRIDIIEKEIERGLQRPSATPGYVGWMLAELSHLRGTASELATDDTYSAGINGSIEVSPTDGLLSNDVMQEYSSVLVDLSYETDPEYVAPKHGQVTVNADGSFSYQADPGFVGSDSFTYRSTTTVNGTANTVYSAPATVMIKVS-NPACNSADLEEPYGELNFFDVSAFLIAFNASDP 1164
BLAST of mRNA_M-pyrifera_M_contig78435.18435.1 vs. uniprot
Match: UPI001BAB42EC (Ig-like domain-containing protein n=1 Tax=Caulobacter sp. S6 TaxID=2823693 RepID=UPI001BAB42EC) HSP 1 Score: 67.4 bits (163), Expect = 6.400e-9 Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 439 IADTYLIENGSA-TIPQEDGVLANDIDQEYRNIIVDLAYELDPEYVAPQHGTLSLNADGSFSYQADPGFVGIDRFSYRSTTIVTGSRDEAFSKPTSVVLLVEESSSCSPAD 768 +AD Y ++ G A T+ GVLAND D +++ LA PQHGTL+LNADGSF+Y + GF G D F+Y ++ +T PT+V L V + + AD Sbjct: 529 VADGYAVKAGHALTVGAASGVLANDTDNNGQSLAATLATN-----GGPQHGTLTLNADGSFTYTPNAGFAGTDSFTYIASDSLTAGT------PTTVTLTVAAQAPTATAD 628
BLAST of mRNA_M-pyrifera_M_contig78435.18435.1 vs. uniprot
Match: UPI001D084111 (FG-GAP-like repeat-containing protein n=1 Tax=Rhodobacter sp. Har01 TaxID=2883999 RepID=UPI001D084111) HSP 1 Score: 66.2 bits (160), Expect = 1.500e-8 Identity = 55/146 (37.67%), Postives = 71/146 (48.63%), Query Frame = 1 Query: 421 NAESLVIADTY-LIENGSATIPQEDGVLANDIDQEYRNIIVDLAYELDPEYVAPQHGTLSLNADGSFSYQADPGFVGIDRFSYRST--------------------TIVTGSRDEAFSKPTSVVLLVEESSSCSPADFTADGVLDI 795 NA L D+Y L +G+ ++ EDGVL ND D E + V L +P HGT++LNADGSFSY A+ G+ G D F+Y T +VTG+ AFSK T V + + ADF DG LDI Sbjct: 207 NAVPLSTDDSYQLASDGTLSVAAEDGVLRNDRDPEGGVLAVTLGS-------SPAHGTVTLNADGSFSYSANAGYTGPDSFAYTVTDALGATATATVSLQPDNTAPVLVTGT--SAFSK-TVVSTAMPLTHIALAADFDLDGDLDI 342
BLAST of mRNA_M-pyrifera_M_contig78435.18435.1 vs. uniprot
Match: L0D5Y2_SINAD (Putative membrane protein n=5 Tax=Singulisphaera acidiphila TaxID=466153 RepID=L0D5Y2_SINAD) HSP 1 Score: 63.9 bits (154), Expect = 9.950e-8 Identity = 37/93 (39.78%), Postives = 49/93 (52.69%), Query Frame = 1 Query: 433 LVIADTYLIENGSATIPQEDGVLANDIDQEYRNIIVDLAYELDPEYVAPQHGTLSLNADGSFSYQADPGFVGIDRFSYRSTTIVTGSRDEAFS 711 + + D Y+ E G+ GVL NDI + L P HGTL+LNA+GSF+Y DPG+ G D+F+YR+T VT S A S Sbjct: 1636 IAVPDQYVTEEGTPLAVPGPGVLGNDISPNGTPLTAVLV-------TGPSHGTLTLNANGSFNYIPDPGYFGSDQFTYRNTDGVTFSNSAAVS 1721
BLAST of mRNA_M-pyrifera_M_contig78435.18435.1 vs. uniprot
Match: A0A3A0DYW7_9BACT (Peptidylprolyl isomerase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0DYW7_9BACT) HSP 1 Score: 63.5 bits (153), Expect = 1.370e-7 Identity = 35/88 (39.77%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 433 LVIADTYLIE-NGSATIPQEDGVLANDIDQEYRNIIVDLAYELDPEYVAPQHGTLSLNADGSFSYQADPGFVGIDRFSYRSTTIVTGS 693 + + DTY++ N + T+ Q G+LAND D + N+ L P +GTL+LNA+GSF+Y + GFVG D F+YR++ V+ S Sbjct: 1750 VAVVDTYVVNRNTTLTVDQAGGLLANDSDPDSTNLTAQLVTN-------PTNGTLTLNANGSFTYVPNTGFVGTDTFTYRASDGVSSS 1830
BLAST of mRNA_M-pyrifera_M_contig78435.18435.1 vs. uniprot
Match: A0A539DD41_9BACT (Outer membrane adhesin-like protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A539DD41_9BACT) HSP 1 Score: 62.4 bits (150), Expect = 2.980e-7 Identity = 42/100 (42.00%), Postives = 53/100 (53.00%), Query Frame = 1 Query: 391 TLAELRNLRDNAESLVIADTY-LIENGSATIPQEDGVLANDIDQEYRNIIVDLAYELDPEYV----APQHGTLSLNADGSFSYQADPGFVGIDRFSYRST 675 T + + NA +AD+Y L +NGS I GVLAND D + DP V PQHGTL+LN DGSF+Y GF G+D FSYR++ Sbjct: 377 TTVSINVVNHNALPDAVADSYELDKNGSLVIDAAGGVLANDGDAD------------DPLTVEVVNGPQHGTLTLNPDGSFTYVPHAGFHGVDSFSYRAS 464
BLAST of mRNA_M-pyrifera_M_contig78435.18435.1 vs. uniprot
Match: A0A7X5YND2_9CAUL (VCBS repeat-containing protein n=1 Tax=Brevundimonas alba TaxID=74314 RepID=A0A7X5YND2_9CAUL) HSP 1 Score: 62.4 bits (150), Expect = 2.990e-7 Identity = 35/89 (39.33%), Postives = 54/89 (60.67%), Query Frame = 1 Query: 412 LRDNAESLVIADTYLIE-NGSATIPQEDGVLANDIDQEYRNIIVDLAYELDPEYVAPQHGTLSLNADGSFSYQADPGFVGIDRFSYRST 675 + +NA + D Y ++ +G T+ + +GVLAND D + + V++ P +GTL+LNADGSF+Y +PGF G D FSYR++ Sbjct: 391 VNNNAAPVAADDAYRLDKDGILTVERANGVLANDADADGDVLTVEVT-------TGPANGTLTLNADGSFTYIPNPGFHGSDNFSYRTS 472
BLAST of mRNA_M-pyrifera_M_contig78435.18435.1 vs. uniprot
Match: UPI001BAAC8E7 (Ig-like domain-containing protein n=1 Tax=Caulobacter sp. S6 TaxID=2823693 RepID=UPI001BAAC8E7) HSP 1 Score: 60.5 bits (145), Expect = 1.350e-6 Identity = 41/99 (41.41%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 445 DTYLIENG-SATIPQEDGVLANDIDQEYRNIIVDLAYELDPEYVAPQHGTLSLNADGSFSYQADPGFVGIDRFSYRSTTIVTGSRDEAFSKPTSVVLLV 738 DTY I +AT+ GVLAND+D ++ LA + P HGTL+LNA+GSF+Y GFVG D F+Y + +D S PT+V L V Sbjct: 1139 DTYAIAGDKAATVAAAQGVLANDVDNNGLSLTAVLA-----QNGGPSHGTLTLNANGSFTYTPTLGFVGTDSFTYLA-------QDSLSSTPTTVTLNV 1225
BLAST of mRNA_M-pyrifera_M_contig78435.18435.1 vs. uniprot
Match: UPI001BA517B4 (Ig-like domain-containing protein n=1 Tax=Caulobacter sp. S6 TaxID=2823693 RepID=UPI001BA517B4) HSP 1 Score: 60.1 bits (144), Expect = 1.840e-6 Identity = 43/99 (43.43%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 445 DTYLIENGS-ATIPQEDGVLANDIDQEYRNIIVDLAYELDPEYVAPQHGTLSLNADGSFSYQADPGFVGIDRFSYRSTTIVTGSRDEAFSKPTSVVLLV 738 DTY I AT+ GVLAND+D N + L+ L P P+HGTL+LNADGSF+Y GFVG D F+Y + +D S P +V L V Sbjct: 1340 DTYAIAGDKVATVAAAQGVLANDVD----NNGISLSAVLAPNG-GPKHGTLTLNADGSFTYTPTLGFVGTDSFTYLA-------QDSLSSTPATVTLNV 1426
BLAST of mRNA_M-pyrifera_M_contig78435.18435.1 vs. uniprot
Match: A0A3A0DSW7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0DSW7_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 2.250e-6 Identity = 49/125 (39.20%), Postives = 66/125 (52.80%), Query Frame = 1 Query: 445 DTYLIENGSATIPQED-GVLANDIDQEYRNIIVDLAYELDPEYVAPQHGTLSLNADGSFSYQADPGFVGIDRFSYRSTTIVTGSRDEAFSKPTSVVLLVEESSSCSPADFTADGVLDIFDVLAFV 816 D Y++ N I GVL ND D ++V L+ +P HG+LSL ADGSF+Y DPGFVGID F+YR + GS AF+ T++V +V + + AD D+FD A V Sbjct: 624 DRYVVRNNRTIIVSAAAGVLLNDFDLNGDEMLVALSS-------SPIHGSLSLAADGSFAYTPDPGFVGIDSFTYR---LSDGSG--AFAVATAIVHVVPQHDPINGIPL-ADH--DVFDAAAGV 733 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78435.18435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78435.18435.1 >prot_M-pyrifera_M_contig78435.18435.1 ID=prot_M-pyrifera_M_contig78435.18435.1|Name=mRNA_M-pyrifera_M_contig78435.18435.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=280bp VPAASSYVQDRLDSIQNNIWESASDDAVIDDLDTELSGWESIIEAYTTLAback to top mRNA from alignment at M-pyrifera_M_contig78435:4..843- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78435.18435.1 ID=mRNA_M-pyrifera_M_contig78435.18435.1|Name=mRNA_M-pyrifera_M_contig78435.18435.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig78435:4..843- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78435:4..843- >mRNA_M-pyrifera_M_contig78435.18435.1 ID=mRNA_M-pyrifera_M_contig78435.18435.1|Name=mRNA_M-pyrifera_M_contig78435.18435.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1680bp|location=Sequence derived from alignment at M-pyrifera_M_contig78435:4..843- (Macrocystis pyrifera P11B4 male)back to top |