mRNA_M-pyrifera_M_contig7843.18433.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7843.18433.1
Unique NamemRNA_M-pyrifera_M_contig7843.18433.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig7843.18433.1 vs. uniprot
Match: D7FIS6_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS6_ECTSI)

HSP 1 Score: 346 bits (887), Expect = 8.020e-118
Identity = 163/221 (73.76%), Postives = 184/221 (83.26%), Query Frame = 1 
Query:    1 QEEKRGAYRAMFACPTSSIRVETADPVAKDALNDFPFPVDAERLPGVFHLGFHAESSFGCSPWFVQRPEGNVMMDSPRFHASLAKALERRGGVSLMVMSHIDDVGDHQRQAWKERFPEMRRVMHKADVQGYGDTKNIEVQLEESSADGRIDGLDYWDLADDLRVLHTPGHSLGSITLLFNP------PPGREGSSGEDEGIAFTGDHLAMSGRTGALTGFP 645
            +EE+RGAYRAM ACPTSSIRVE +DP+A+DAL DFPFPVD+ERLPGVFHLGFH ESSFGCSPW VQRPEGN+MMDSPRFH  LAK L+ +GGVSLMV+SHIDDVGDHQR  WKERFP M+RVMHKADVQ YGDT+NIE++L+  SADG+I   DYW L D LR LHTPGHS GS+TLL++       P    G S + EGIAFTGDHLA+SGRTGALTGFP
Sbjct:   22 EEERRGAYRAMHACPTSSIRVEASDPIARDALKDFPFPVDSERLPGVFHLGFHGESSFGCSPWLVQRPEGNMMMDSPRFHPGLAKELDAKGGVSLMVLSHIDDVGDHQR--WKERFPNMKRVMHKADVQRYGDTRNIEIKLDSDSADGQIGSRDYWQLGDGLRALHTPGHSRGSVTLLYHGNNKSAHPAAEGGGSAQAEGIAFTGDHLALSGRTGALTGFP 240
[Close]
BLAST of mRNA_M-pyrifera_M_contig7843.18433.1 vs. uniprot
Match: A0A7S1TZA2_9STRA (Hypothetical protein n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZA2_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.280e-59
Identity = 111/223 (49.78%), Postives = 140/223 (62.78%), Query Frame = 1 
Query:    4 EEKRGAYRAMFACPTSSIRVETADPVAKDALNDFPFPVDAERLPGVFHLGFHAESSFGCSPWFVQRPEG-----NVMMDSPRFHASLAKALERRGGVSLMVMSHIDDVGDHQRQAWKERFPEMRRVMHKADVQG-----YGDTKNIEVQLEESSADGRIDGLDYWDLADDLRVLHTPGHSLGSITLLFNPPPGREGSSGEDEGIAFTGDHLAMSGRTGALTGF 642
            EEK  A RAM ACPT+SI     +  A+DA   FP  VDA RLP VFHLG+H+E+SFG + +FV   +      N+M DSPR+  +LAK LE  GGV LMV+SH DDV +  +  WK RFP+M+RVMH ADV+G     Y D   +E QL   + DG       W+LA  ++V+HTPGHS GSITL+ +      GS    +G+AFTGDHLA+S R G L GF
Sbjct:   88 EEKTAALRAMSACPTASIHTRKPEAAARDAAGSFPLVVDAARLPRVFHLGYHSEASFGATSYFVATKDAGGDPFNIMFDSPRYVPALAKNLEAAGGVQLMVVSHKDDVAEMNK--WKARFPDMQRVMHAADVRGEDRWPYIDMTGVEQQL---TGDGP------WELAPGVKVVHTPGHSAGSITLILS------GSVTGGDGVAFTGDHLALSARLGRLDGF 293
[Close]
BLAST of mRNA_M-pyrifera_M_contig7843.18433.1 vs. uniprot
Match: A0A7R9U5M7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5M7_9STRA)

HSP 1 Score: 191 bits (485), Expect = 3.300e-56
Identity = 98/219 (44.75%), Postives = 142/219 (64.84%), Query Frame = 1 
Query:    1 QEEKRGAYRAMFACPTSSIRVETADPVAKDALNDFPFPVDAERLPGVFHLGFHAESSFGCSPWFV--QRPEG---NVMMDSPRFHASLAKALERRGGVSLMVMSHIDDVGDHQRQAWKERFPEMRRVMHKADVQGYGDTKNIEVQLEESSADGRIDGLDYWDLADDLRVLHTPGHSLGSITLLFNPPPGREGSSGEDEGIAFTGDHLAMSGRTGALTGF 642
            +EE   A +AM  CPT SIR    + + K   + FP  VD++R+P VFHLG+ +E SFG   + V  + PEG   N++MDSPRF + LAKAL+  GGV  MV+SH DDVGD  R  WKERFP+M+R+MHK DV+    T++    ++ +  + +++G   W++AD +++++TPGHS GS++L+       +G     +G+AFTGDHLA+S R G L GF
Sbjct:   82 EEETTKALQAMVTCPTGSIRTRKPEKMVKTVRDSFPLAVDSKRIPQVFHLGYASEKSFGAVAYLVTSKTPEGEPFNILMDSPRFSSHLAKALDAVGGVQYMVLSHKDDVGDMNR--WKERFPDMQRIMHKVDVR----TEHQWPYIDMTGVERQLEGSGPWEVADGVKIVYTPGHSQGSVSLIV------DGEHTGGDGVAFTGDHLALSARLGRLDGF 288
[Close]
BLAST of mRNA_M-pyrifera_M_contig7843.18433.1 vs. uniprot
Match: A0A812X730_9DINO (Cgt protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812X730_9DINO)

HSP 1 Score: 192 bits (489), Expect = 2.930e-55
Identity = 111/217 (51.15%), Postives = 134/217 (61.75%), Query Frame = 1 
Query:   19 AYRAMFACPTSSIRVETADPVAKDALNDFPFPVDAERLPGVFHLGFHAESSFGCSPWFVQR-PEG---NVMMDSPRFHASLAKALERRGGVSLMVMSHIDDVGDHQRQAWKERFPEMRRVMHKADVQG-----YGDTKNIEVQLEESSADGRIDGLDYWDLADDLRVLHTPGHSLGSITLLFNPPPGREGSSGEDEGIAFTGDHLAMSGRTGALTGF 642
            A +AM +CPT SIR        K+ LN FP  V  E+LP  FHLG+H+  SFG + +F+   P G   NVM DSPR+ + LAK LE  GGV LMV+SH DDV DH+R  WKERFP M RVMHK DV+G     Y D   +E+QLE         G   W LA+ L+V+ TPGHS GSITL+       EGS    +G+AFTGDHLA+SGR G L GF
Sbjct:    4 ALQAMISCPTGSIRTNEPLSKTKEVLNTFPILVH-EQLPRAFHLGYHSSKSFGAASYFLAGGPSGRPFNVMYDSPRYSSRLAKVLEAAGGVHLMVLSHKDDVADHER--WKERFPGMTRVMHKQDVRGPLSWPYIDMTGVEMQLE---------GAGPWTLAEGLKVVFTPGHSAGSITLIA------EGSRTGGDGVAFTGDHLALSGRLGRLDGF 202
[Close]
BLAST of mRNA_M-pyrifera_M_contig7843.18433.1 vs. uniprot
Match: A0A1Q9E385_SYMMI (Cyclomaltodextrin glucanotransferase n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9E385_SYMMI)

HSP 1 Score: 191 bits (485), Expect = 3.780e-53
Identity = 108/222 (48.65%), Postives = 135/222 (60.81%), Query Frame = 1 
Query:    4 EEKRGAYRAMFACPTSSIRVETADPVAKDALNDFPFPVDAERLPGVFHLGFHAESSFGCSPWFVQRPEG----NVMMDSPRFHASLAKALERRGGVSLMVMSHIDDVGDHQRQAWKERFPEMRRVMHKADVQG-----YGDTKNIEVQLEESSADGRIDGLDYWDLADDLRVLHTPGHSLGSITLLFNPPPGREGSSGEDEGIAFTGDHLAMSGRTGALTGF 642
            E+   A +AM +CPT SIR        K+ LN FP  V  E+LP VFHLG+H+  SFG + +F+   +     NVM DSPR+ + LAK LE  GG+ LMV+SH DDV DH+R  WKERFP M RVMHK DV+G     Y D   +E+QLE         G   W LA+ L+V+ TPGHS G ITL+       +GS    +G+AFTGDHLA+SGR G L GF
Sbjct:  200 EDMDAALQAMISCPTGSIRTNEPLSKTKEVLNTFPILVH-EQLPRVFHLGYHSPKSFGAASYFLAGGQSGSPFNVMYDSPRYSSRLAKVLEAAGGIHLMVLSHKDDVADHER--WKERFPGMTRVMHKQDVRGPLSWPYIDMTGVEMQLE---------GAGPWTLAEGLKVVFTPGHSAGCITLIA------DGSRTGGDGVAFTGDHLALSGRLGRLDGF 403
[Close]
BLAST of mRNA_M-pyrifera_M_contig7843.18433.1 vs. uniprot
Match: A0A812PBH6_SYMPI (Cgt protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812PBH6_SYMPI)

HSP 1 Score: 191 bits (485), Expect = 5.420e-53
Identity = 110/221 (49.77%), Postives = 137/221 (61.99%), Query Frame = 1 
Query:    7 EKRGAYRAMFACPTSSIRVETADPVAKDALNDFPFPVDAERLPGVFHLGFHAESSFGCSPWFVQ----RPEGNVMMDSPRFHASLAKALERRGGVSLMVMSHIDDVGDHQRQAWKERFPEMRRVMHKADVQG-----YGDTKNIEVQLEESSADGRIDGLDYWDLADDLRVLHTPGHSLGSITLLFNPPPGREGSSGEDEGIAFTGDHLAMSGRTGALTGF 642
            E   A +AM +CPT SIR  T     KD L+ FP  VD ERLP VFHLG+H+  SFG + +F++    +   NVM DSPR+ + LA  LE  GGV LMV+SH DDV DH+R  WKERFP M RVMH+ DV+G     Y D   IE+QL         DG   W L + L+V++TPGHS GSITL+ +    R G     +G+AFTGDHLA++GR G L GF
Sbjct:  268 EVDAAVQAMISCPTGSIRTSTPLTKTKDVLDTFPILVD-ERLPQVFHLGYHSPKSFGAASYFLKGGTDKSPYNVMYDSPRYSSRLANLLEAAGGVQLMVLSHKDDVADHER--WKERFPAMTRVMHQQDVRGPSSWPYIDMTGIEMQL---------DGDGPWQLEEGLKVVYTPGHSAGSITLIADAT--RTGG----DGVAFTGDHLALNGRLGRLDGF 470
[Close]
BLAST of mRNA_M-pyrifera_M_contig7843.18433.1 vs. uniprot
Match: A0A812UG26_9DINO (Cgt protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UG26_9DINO)

HSP 1 Score: 186 bits (473), Expect = 6.860e-53
Identity = 105/213 (49.30%), Postives = 133/213 (62.44%), Query Frame = 1 
Query:   31 MFACPTSSIRVETADPVAKDALNDFPFPVDAERLPGVFHLGFHAESSFGCSPWFVQRPEG----NVMMDSPRFHASLAKALERRGGVSLMVMSHIDDVGDHQRQAWKERFPEMRRVMHKADVQG-----YGDTKNIEVQLEESSADGRIDGLDYWDLADDLRVLHTPGHSLGSITLLFNPPPGREGSSGEDEGIAFTGDHLAMSGRTGALTGF 642
            M +CPT SIR E      ++ L+ FP PV  + LP VFHLG+H+  SFG + +F+   E     NVM DSPR+ + LAK LE  GGV LMV+SH DDV DH R  WKERFP M RVMHK DV+G     Y D  ++E+QLE         G   W +A+ L+V++TPGHS GSITL+       +G+    +G+AFTGDHLA+SGR G L GF
Sbjct:    1 MISCPTGSIRTEQPLRKTREVLDAFPIPVH-KHLPHVFHLGYHSPKSFGAASYFLTGKEKARPFNVMYDSPRYSSRLAKVLESAGGVQLMVLSHKDDVADHAR--WKERFPAMTRVMHKQDVRGPLSWPYIDMTDVEMQLE---------GEGPWCVAEGLKVVYTPGHSSGSITLIA------DGAQTGGDGVAFTGDHLALSGRLGRLDGF 195
[Close]
BLAST of mRNA_M-pyrifera_M_contig7843.18433.1 vs. uniprot
Match: A0A7S2WU26_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU26_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.020e-47
Identity = 95/223 (42.60%), Postives = 130/223 (58.30%), Query Frame = 1 
Query:    7 EKRGAYRAMFACPTSSIRVETADPVAKDALNDFPFPVDAERLPGVFHLGFHAESSFGCSPW----FVQRPEGN---VMMDSPRFHASLAKALERRGGVSLMVMSHIDDVGDHQRQAWKERFPEMRRVMHKADVQG-----YGDTKNIEVQLEESSADGRIDGLDYWDLADDLRVLHTPGHSLGSITLLFNPPPGREGSSGEDEGIAFTGDHLAMSGRTGALTG 639
            E++ AY AM ACPT SIR+ET DP+ ++ +  FP  +D   +PGVFHLGFH E SFG +P+    F +   GN   VMMD+PRF   LAKA++  GG+   ++SH DDV   ++  WK RFP ++RVMH+AD+       Y DT ++E++L  S  +        W L   L  +HTPGHS GS+T + +       +    E  AFTGDHL  S R G + G
Sbjct:   92 ERKDAYAAMVACPTGSIRLETPDPLMREVIGSFPRLIDPS-MPGVFHLGFHDEMSFGATPYLVAGFAKDEAGNPVNVMMDTPRFSERLAKAIDAVGGLHYYLLSHKDDVASMEK--WKARFPGVKRVMHEADITTTQQWPYIDTTSVEIKLPGSERE--------WKLLPGLSAIHTPGHSQGSVTFIASA------AFTGGEACAFTGDHLCFSSRLGRIDG 297
[Close]
BLAST of mRNA_M-pyrifera_M_contig7843.18433.1 vs. uniprot
Match: A0A2U1N2D3_ARTAN (Metallo-beta-lactamase family protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1N2D3_ARTAN)

HSP 1 Score: 167 bits (423), Expect = 3.870e-47
Identity = 80/204 (39.22%), Postives = 124/204 (60.78%), Query Frame = 1 
Query:    1 QEEKRGAYRAMFACPTSSIRVETADPVAKDALNDFPFPVDAERLPGVFHLGFHAESSFGCSPWFVQRPEGNVMMDSPRFHASLAKALERRGGVSLMVMSHIDDVGDHQRQAWKERFPEMRRVMHKADVQGYGDTKNIEVQLEESSADGRIDGLDYWDLADDLRVLHTPGHSLGSITLLFNPPPGREGSSGEDEGIAFTGDHLAM 612
            Q+E+  A +A+ +CPTSSI  E       +A   FP P+D +R+PGV+H G+H++ S+G + + +  PEGN+++DSPR+   LA  +E+ GGV  M ++H DDV DH++  W +RF +  RV+H  +VQ    T+N+E++L         DG   WDL +D++++HTPGH+ GS+ L + P               FTGDHLA+
Sbjct:   94 QDERLKALQALLSCPTSSISTEKPARDILEAQKTFPLPIDIDRIPGVYHCGYHSDKSYGAASYLIVHPEGNILVDSPRYTERLASNIEKMGGVRYMFLTHKDDVADHEK--WSKRF-KCERVLHSTEVQD--STRNVEIKL---------DGSGPWDLGEDIQLIHTPGHTEGSVCLFYKPLK-----------ALFTGDHLAL 272
[Close]
BLAST of mRNA_M-pyrifera_M_contig7843.18433.1 vs. uniprot
Match: A0A7S2Y224_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y224_9STRA)

HSP 1 Score: 167 bits (423), Expect = 6.910e-47
Identity = 90/211 (42.65%), Postives = 130/211 (61.61%), Query Frame = 1 
Query:   10 KRGAYRAMFACPTSSIRVETADPVAKDALNDFPFPVDAERLPGVFHLGFHAESSFGCSPWFVQRPEG-NVMMDSPRFHASLAKALERRGGVSLMVMSHIDDVGDHQRQAWKERFPEMRRVMHKADVQGYGDTKNIEVQLEESSADGRIDGLDYWDLADDLRVLHTPGHSLGSITLLFNPPPGREGSSGEDEGIAFTGDHLAMSGRTGALTG 639
            K  A++AM +CP  +IR E  DP  K+A+  FP  +D +RLP ++HLGFH   +FG  P+ + RP G N+M+D PR+H +LA ++E  GGVS +V++H DDV  H++  WKERFP++ RV+++ D+   G TK  E  LEE   D    G  Y D   D  +++TPGH+ GSI++ +    G+EG S     + FTGD L  S R   L+G
Sbjct:   97 KLKAFQAMISCPVGAIRTEKPDPFVKEAMKSFPMAID-KRLPNIYHLGFHQWQTFGAIPYLIVRPNGKNIMVDVPRYHHALADSIEALGGVSYLVLTHKDDVHGHKK--WKERFPDLVRVINRLDLDMEGQTKVCERWLEEEG-DSMDQGPWYLDDLKDHEIVYTPGHTAGSISMHYQ---GQEGES-----VLFTGDTLCYSQRQMQLSG 295
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7843.18433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIS6_ECTSI8.020e-11873.76Lactamase_B domain-containing protein n=1 Tax=Ecto... [more]
A0A7S1TZA2_9STRA1.280e-5949.78Hypothetical protein n=6 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U5M7_9STRA3.300e-5644.75Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A812X730_9DINO2.930e-5551.15Cgt protein n=1 Tax=Symbiodinium necroappetens Tax... [more]
A0A1Q9E385_SYMMI3.780e-5348.65Cyclomaltodextrin glucanotransferase n=3 Tax=Symbi... [more]
A0A812PBH6_SYMPI5.420e-5349.77Cgt protein n=1 Tax=Symbiodinium pilosum TaxID=295... [more]
A0A812UG26_9DINO6.860e-5349.30Cgt protein n=1 Tax=Symbiodinium natans TaxID=8784... [more]
A0A7S2WU26_9STRA1.020e-4742.60Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2U1N2D3_ARTAN3.870e-4739.22Metallo-beta-lactamase family protein n=1 Tax=Arte... [more]
A0A7S2Y224_9STRA6.910e-4742.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7843contigM-pyrifera_M_contig7843:220..8535 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score328.9
Seed ortholog evalue1.7e-87
Seed eggNOG ortholog2880.D7FIS6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.4Fe-4S single cluster domain of Ferredoxin I
EggNOG OGs2QPS3@2759,COG0491@1
Ec32 ortholog descriptionBeta-lactamase-like
Ec32 orthologEc-20_003080.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size651
Cds size621
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816686.5092404-UTR-M-pyrifera_M_contig7843:219..2491622816686.5092404-UTR-M-pyrifera_M_contig7843:219..249Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7843 220..249 +
1692278119.4394948-UTR-M-pyrifera_M_contig7843:219..2491692278119.4394948-UTR-M-pyrifera_M_contig7843:219..249Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7843 220..249 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816686.5203013-CDS-M-pyrifera_M_contig7843:249..3551622816686.5203013-CDS-M-pyrifera_M_contig7843:249..355Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7843 250..355 +
1692278119.4502277-CDS-M-pyrifera_M_contig7843:249..3551692278119.4502277-CDS-M-pyrifera_M_contig7843:249..355Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7843 250..355 +
1622816686.5311468-CDS-M-pyrifera_M_contig7843:982..10411622816686.5311468-CDS-M-pyrifera_M_contig7843:982..1041Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7843 983..1041 +
1692278119.4586315-CDS-M-pyrifera_M_contig7843:982..10411692278119.4586315-CDS-M-pyrifera_M_contig7843:982..1041Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7843 983..1041 +
1622816686.5430236-CDS-M-pyrifera_M_contig7843:1576..17131622816686.5430236-CDS-M-pyrifera_M_contig7843:1576..1713Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7843 1577..1713 +
1692278119.467484-CDS-M-pyrifera_M_contig7843:1576..17131692278119.467484-CDS-M-pyrifera_M_contig7843:1576..1713Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7843 1577..1713 +
1622816686.5544753-CDS-M-pyrifera_M_contig7843:3161..32431622816686.5544753-CDS-M-pyrifera_M_contig7843:3161..3243Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7843 3162..3243 +
1692278119.4770916-CDS-M-pyrifera_M_contig7843:3161..32431692278119.4770916-CDS-M-pyrifera_M_contig7843:3161..3243Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7843 3162..3243 +
1622816686.5683196-CDS-M-pyrifera_M_contig7843:7333..74081622816686.5683196-CDS-M-pyrifera_M_contig7843:7333..7408Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7843 7334..7408 +
1692278119.4870741-CDS-M-pyrifera_M_contig7843:7333..74081692278119.4870741-CDS-M-pyrifera_M_contig7843:7333..7408Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7843 7334..7408 +
1622816686.5786002-CDS-M-pyrifera_M_contig7843:8373..85351622816686.5786002-CDS-M-pyrifera_M_contig7843:8373..8535Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7843 8374..8535 +
1692278119.498709-CDS-M-pyrifera_M_contig7843:8373..85351692278119.498709-CDS-M-pyrifera_M_contig7843:8373..8535Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7843 8374..8535 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7843.18433.1prot_M-pyrifera_M_contig7843.18433.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7843 250..8535 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7843.18433.1

>prot_M-pyrifera_M_contig7843.18433.1 ID=prot_M-pyrifera_M_contig7843.18433.1|Name=mRNA_M-pyrifera_M_contig7843.18433.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp
MFACPTSSIRVETADPVAKDALNDFPFPVDAERLPGVFHLGFHAESSFGC
SPWFVQRPEGNVMMDSPRFHASLAKALERRGGVSLMVMSHIDDVGDHQRQ
AWKERFPEMRRVMHKADVQGYGDTKNIEVQLEESSADGRIDGLDYWDLAD
DLRVLHTPGHSLGSITLLFNPPPGREGSSGEDEGIAFTGDHLAMSGRTGA
LTGFPM*
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mRNA from alignment at M-pyrifera_M_contig7843:220..8535+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7843.18433.1 ID=mRNA_M-pyrifera_M_contig7843.18433.1|Name=mRNA_M-pyrifera_M_contig7843.18433.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8316bp|location=Sequence derived from alignment at M-pyrifera_M_contig7843:220..8535+ (Macrocystis pyrifera P11B4 male)
CAGGAAGAAAAACGAGGCGCGTATCGGGCAATGTTCGCGTGTCCCACTTC
GTCCATCAGGGTTGAGACCGCCGATCCCGTCGCGAAGGACGCCCTGAACG
ATTTCCCCTTCCCCGTTGACGCGGAACGCCTTCCTGGTGAGAGGAAATCA
CGCGTCTGTTTTTTTGAGAGGCAGCCCTGCTTGAAAAAAAATCCTGTTGT
GTGAAATCCTGTTTTTGCGGACGCCTGGTAAAAATGTGTCTACTAGTAGA
AGCGGGTTTGGGGAAAACTGTTCAAGGAAGCATGTTTTTGTGGAAACCTG
ACTAGTGATGCCTGGTAAGAGAAACCTTTTTTATGCAGGGCTTATCACAG
GTTGTGGCCCCACCCGCGGGCTAGGTCAGGAAGTTTTTGAAGTCTCGCGG
GTCGGGTCGGGTCGGTTCGGTTCGGGTCGGTTCGGGTCGGGTCCGGTCGG
GACAGTGTCAAACTCTCACGGATCGGATAGGGCCATCCTCTCTCGACCCC
GGCTTGACCTCACCCGCGAGGTTTAACCCGACCCATGAACAGCCCTGGTT
TATGCTTACCTGGGGGTGGAGTCCTTCTTGGAGAAAACTGATTTGTGGCA
GCGGCTTTGGGGAAGAAGCTTGACCACCATGATCGTTTTTTTTTCTCGTC
TACAATGACCTTCAGACCCGTCTTCCTACGTCCCCCCGCATGATTGATAC
CCGTTAAATGTGTACCTTTTTCTGGCGTTTTCCATCACGATGTTTTTTTC
AACTTGCCCTCAGGTGTGTTCCATTTGGGCTTCCACGCGGAAAGTTCTTT
CGGCTGCTCTCCGTGGTTCGTGGTGAGTTTTCTTTAACAGGTCGATGACG
TTGCCTCCCCCCCCCCCCCTCTACCGATTTAGATATGGCCGTCGCCCGTC
GATCTGCGCCTGGGCCACAGGTTTCCGCCAGATAACAATGCTCCGATTGA
CCCGAAAATATTATTCCGAATGAACCGAACACAAAACTCAATTGACCCTA
CCGATACGTATGTGTCTAATTGACCAGATACCAAGCCTCCGATTCGATAG
CATTGCTCCGATTGAGCCGAAAATATCATCCCGATTGACCGGAAAACAAA
GCTCGATTGTCCCTTCAACAATGTTCCGATTGGCTCAATAGAAAATGGTC
CGACTGGCCCGATAGAAATGGTCCGATTGGCCCGATTTGCATGTGTCTGA
TTGGCCCGATACCAACCCTCCGATTGATCAGAAACACTGCTGCGATTGAC
CCGAAAATAATGTTCTGATTCACCCCGGTAACAAATTTTCCGATTGTCCC
GAACAAAATGCCCCTATTGGCCCAATACCAATGCTCTGATTGACCCGAAT
CGGACAGCAACGACCGGAAGGCAACGTGATGATGGACAGCCCGAGGTTCC
ACGCCAGCCTGGCCAAAGCTCTCGAGAGAAGAGGAGGCGTGTCCTTGATG
GTCATGTCCCACATCGATGATGTCGGCGACCACCAAAGGCAAGCGTTGCG
CAGTTTTCCGCAAGGGCTACGTACGTGTCCCCAACCCCGTCCCCCTTTCG
CGAAATCGTTGTTCGAGGGCGCATGTCGCGTATAACTCGATTTTCACTGC
GGTAGTGCCCACAAGCAGTACTGCAGTGTGTCTACCCTTCACAAGCACGA
CTGCAATGTGCACGCGTAATTACCACTGCAACTACTGCACATACAACTAT
AAATAGGAACGACTACAAGTGTGTGTACGACTGCAACCACAACAACAGCT
ATGCAACTACAAGGACTGCAACATCATCACCGACAACAGCAGCAGCAGCA
GCAGCAGCAGTAGCAGCAACAACAACAACCCAACAGTAGCTGCAGCAACA
GCAAAAGCTACATGCTCGATTGAGAGTGCTTGTCAGAGTACTCACTGCCA
GAGCTTAATGAACAGCAGCAACTACAACAACACAGCAATAACTACAACAA
CAGCAAAAACCACATCCTCGATTGAGAGTGCTTGTCGGAATATTCACTGC
TACAGCGTAATCACCGACAGCACCAGCAACAACAACACAACAGTAACGAC
AGCAGCAGCAAAAACCACAAGCTCGATTGAGAGTGGTTGTCGGAGTACTC
GCAGGCTCGCCTCATCAAACAGCTTTACGACGGACTCCCCTGGCAAGACA
GCTGGTGCACGTTTCTGGTTGCAGACTGGAACGTCAGACAGACCCGACAG
ATCATTCCCGGTTCATGATCTACGTTTTTCAGGGGAGATTATACCTCGTC
TGTATGATCTAGCTCATGTTGCCGGGTGGGCGCCTGCCTCACTATTATAG
AACCGGCACGATGGAGCAGCGTACCACCGGAGGTATGTGGTAGGTATGCG
CCTCTGTACGTACGCATATCCCACCCAATGATTCATAGATGAGGTACGAG
TATGTACATCGTTAGCTCTTCGATGTGTTAACGGTTGGTCACGTGCCTGT
CTGGCAGTCTCTCTGCCGTCCTCGTTTCGAGTTGAGAGAGGCGTTATCGC
GTGCGCCTCGGACAGTGGGAATTAATGGTTTGACCCTGACTCGAGTAAAT
AATTAATGGAATTACACCGACCCATCCCCTCTTATCATTGAAGTCAATGA
TGAATAAAAACATTCCCCGAATATATATATGAAGTATCACCTAGGGGTTA
CCGATATTCAGGGCTGTTCATTGGTCGTGTCAAATCTCGCGGGTTGGGCC
GGATCGGGTCGGGTCGTGTCGGGTCCGGTCAGGTCACCTAACCCGCCCCC
GACCCGATGCGTGAGATTTTGAGACCTCTCGACCAGACCCGACCTGACCC
GACCCCACTCGACCCGTGGACATCCCTGGAATTTGAGGGGGATGACCTCT
GTCGCGGTAAAAAAGTCGAGCCTGTAGTTCTCTTATCTGAGGCATTATAC
TCGCTGTGTGCGTTTGGTTGTGCGGGTGGTAATACATCCCAGGTGGAAAG
AACGCTTCCCGGAGATGCGAAGGGTGATGCACAAGGCCGACGTGCAGGGC
TACGGGGACACCAAAAACATCGAGGTGAGATTATAGGCGAAGGGCACCGG
AAAACACTTCGCACGCGCGCGCCGTTGCGGTAGTGCGTACAACTTGGCGA
ACAGAGGTGGCCGGGACCCCCCCCCTCCCCGCCTGCAACATCTGGGCGTA
AAACATAGAAAACCCACAAGGTGTCGACATCCTCTCAATTCGGTGCGCTT
AATGGTGTGCTATGTACACTGTTCAATGTCTCCACAAGGAACGTCTTCCG
ACCACGTTGTGCAAGGCGGGATGACGGCAACCTGTGCAGCTTCGACACAA
ATGGTTGATATTTCATGTTTGCTCTTCAATGCACCTTCAGTGTCGACCAC
CTTTTTCGTTCAAGTTTCTACAGAAATGATTTGTGGCCCACACTCACTGG
TGAACGCATGTTCCTTCCAGTTCGACAAAATGGTTAACAATCCACACCCA
AGTCCTGGCAACATCTTGATTCTAAGGTTTTTTTATGAACACATGTTCAT
TCCGGTTCGACAAAATGGTTGACAATCCACACCCAAGTCCTGGCAACATC
TTGATTCTAAGATTTTGTCTCCAGAGTTCGGTCTTAGGGTTGGGGTTGGT
GGTTGTATTGCGACAAGTATGTTTCAACCATTTTGCCGAACCTGGGCCGA
GTCTTTTATCGGGTTAGAGTTGATGGCTTAACTAAGTTAAGAATATTTCA
ACACTTTTTGCCGAACCTGGGTCAAGTATTTTACAGCCCTCCGCCATTCC
TGGTGGTGGTGGTGGTGGTGTTGGTGTTGGTGCCGGTGCTGGTGCCGGTG
CCGTGGCAACAGCTGGTGGTAGTCTCATATTTCACATGGGCGGTTGAAAA
CTTGGTTACGTTTGAAAACCGGCCTATACTTTATGAACAGCGGTTTCGAC
AGACACGCTGAAGCCGCACGCCACCGCAGCGACTTGCGCGAAACTGTTGG
TGCGAATAGCGCGTGGGCGTTTTTTTGTGCGTTTTTTTTGTAACTATCGG
GCATCGTTTTTTTTTCGCGGGGCACAGCCAACGCGGTGGAGAGCTATTTG
TATGGATAATAAGGGTTTTGAGTTGGCTTGCGGTCTGATACGCACAGGTT
TCACTACCCAGAGAGGACTACCGTGTCACACTATTTTTATCCCACTAGGG
TGATAAGACAAGACACCCCAGTCGGACGATTTTCAAAGCTGGGTTTGTCG
GCAGCGAGGAGGGCGTACCGAGTACGCCGAGTTGTGCGTCTGTGCAAACA
ACCTTTCTCGACGAATAAATTCCAAAGCCACCATTTTCGTTGTGTGTGCC
CCCCGTGTTTCGGGAGGAAACCGGGTCTGAAATTCATCCCAGGGGGTGTG
CTAACTTATCACCCAGTGTGATACGGTACATTGTGCGTTTTGAGCTTTGA
GCCCTAAAGAGCTCCCGTTGCTTGAAGCCCTCTTGACCAAGGGTGTGTAC
TACCGCATATTCAAGTGCGGACGTACCGGTAGTACCACGAAACCGCCACA
TGTGGAAATCCCTCGCAAGAACCGCTGCCGAAGAAACTTGCGAAAACGTA
GGGTTTCCACTACTCTATGGAGGTGTTTTGCACCGGGAAGCCAGCGCGAA
AATCTCAAAACCGCAAACAGAGTGCAAACCGCATGTGGTTTTGAGAACCG
CTGGGAGCCTGGCACCGGAATCACCCATCCCTGCTCTAAAGTGCACCCAT
ATTTTTAGTTTACAAAATACTTGGGATGTGAGTGGGATGGTGTTTCAGCA
CTGAACGGGTTAAGGTTGGCCCGTCGAGGTATATCGTTCGTTCGCGGGGG
CAGCAGATGAGACCCGCGTGGGGCGTGGGACAGCAACCTGTATGTACGAT
ACGTGTGTGTAAACGGTTACATACCAGGTATTATTTTGTACAGGTAGTAC
AATGGTTCACACCTCTGGCATATATATTTCAAGACAGATATTTCATCTTT
TCCCGGTGGTGTATGATCTACTCTACGGCAGCTCCTTGTTGGCGGGTGGG
ACTCGTACAATCTCCATGATCTACCCTAGCACATGCTTCCTGGGTTAGAT
CTGTTCTACGCAGGTCCTGCGAAATGCTCCCGCTGCGACTGGTGAGGAAC
TGCAGCAGATGATCTATCTGTAGATAGATATATCATGATCTGTCCGGGCT
GTGCTGTGGGTAGAGCTGTGAGTCGGTTCAGTATGCATCGGCGACTAGGT
ATCCGTTGCCTGTGGCAGGGCATTTCAGCTTTTAGTATAATCGTTGCGTG
CGGTACTCTTGAGAAGTTTTTATGCGCCTTTGTAATTGACCTGACGCATG
CATTTTCATGTTTTCGTACCAGGTAAATAAATGCCTGGCACTCTTAAATC
CTTTTAGGACAGCAGTCTCGTTTCGGGGACAAACGAGTCAAATCCCGAGT
AGTTTGTGCCCAAAACGGGACTGCAGCACTATTATAAAGAGGTTAAGGAC
CCCCACCAGTAAAAAAATAAGCCTTGGAAGATAAAACGCAGTTTCTATTG
ATACCCCCATCGTCCTTCGTAGCTGTCTGTCCGTTGCACCTGACTGGCGC
ATTCGTGGCTCGTTTTTGTTTTTTTTTGTCCTTGCTCAATACTTGAAAAG
CCGGTTAGTTGGCATAGTTCGTCACCTAAAAAATATAAGGTCCGTTTTTA
CTTGATACAGTATTATTATTGAAATGGTACTTGTGTGTCGGGACAGCGTG
GTGCCGGTGAAGTCCAGCCGACCCGCAGCCTTAGCAATGGTTGATTGCAG
GACGTCGTCACCCGTTCTGTCGCTCTACCTACCTGTTGCTGTGCTCGTAC
GCATGGGGTCTGTGTGGACGTCACAAGAAGCGGGGACGGTTTGCGTTATT
TGACCCATCGCCAGGAGGCGTTTCCGCCCGCGAAAACACTTGATTTTTTT
GCTGAGTTTGTCAGGAGGGACCCTGCTGTTTCTAACGGCCTGGTTGCTGC
TCATGCGTGAAGTTCCTCAACGCGCGCATTCGTTGTAGATGTACGTACAC
GACTTGCTACATACAGTAAGTACTACGGGGGACCATAGTAAATAGGACGT
ACGGTACACACAAAAACCTATATATATATATATTTACCTACTGTATTTCT
TAGTAACAATATTTTGGTCCTATTTACCCCGTAATAGTAGTTGCCTAGTG
CCGGTTCAGAAAAAAATTGATTTCCGAGATTTTTCCTTGCTATCGCCTAG
GTCTCGTCAGCCACAGGAAACGTCCCAGAAACACGTTTCGCCTGAATTTT
GGTGCCGTAGACGCGGCGATTTCGGCCGCGGCAACCTCCATTTGCTCGTA
TGGGGACAGGTCGCAGATAGACGCGAGTCGATGAAGGCAGAGAGTGCTGA
ACTCTTCTCGCGAGGTAAGATGCAAGCCTAGGGACGAACCATAGTGGGGA
GGGGGGGACAAGGGCTTTACTATTACGGGGGACCATAGTAAGTAGGACGT
ACGGTACACACAAAAACCTATATATTCACCTATTTTTACTAACAATATTT
GGTCCTGTTTACTACTGTATGGTCCCCCGTAATATGCGAACCCGCGTCTG
AGTTAGGACTAGGAGGGAGAAGGGGCAAGAAGGTCGAAGATAATCAATGG
GATGGAACAAATAATAAAAAAAATTGTCACGGGCCTACTATGTGATCCAA
TGGTTGATCGGAGTTACGGCTACAGTAGGAGGGAGCAGGAGAGAGAAGGG
CCGAGCTGAGAAATGAGATGGAACAAGTAATAAAAAAAAAGGGTCATGGT
CGGGGTTATGTTCGATTGTGGTTACAGCACGAAAGGGGTCGTTGTCGGGG
TTTGGTTTCTTTGGGGTTGGTGTAAGGGTTAGGTTGGGTCGCATCCGGTT
TTCGGCCGAAGTACCCGCAATAGCAACGTGCGTCTTGCAACCATCGTTTC
GAGCCTGAGCCAAGTGGCGTGCTATAACGTTCGGATTCGGCAAGGTTGTT
CCACCAGTCCGCTGACACAACGCGAATTTTTGTCTCTTGTTCTGGTCTCC
CTCCCCCCCTCTCTCCCGCACTCCCTCCCTCCCTCCCACTGTCCCTCCCC
CCCTCCCCCTTCCCTCCTTTCCGCCCGCTCTCCCTCCCTATTTTCCTCTC
GGCGTTGCTCGAAGGTGCAACTGGAAGAGAGCTCTGCTGACGGTCGGATC
GATGGGCTCGACTACTGGGACCTCGCCGACGATCTCCGGGTGAGAGACGG
GCTGGGCTGCCGATTCAGTATCGGGTTCCTCATGGCCTCTAGTTTTAGCT
TTTTCTGGACCTGGTTTTGAGCAAGTACGGGGCGGAACATATTTTTTGCT
TTGCTTTTGAGGATTCGGCTGCTCTCGACATGTGAGCTGTGGTCTAGACC
TGTAGGAGTCGATATTACGGGGGACCATAGTGAATAGGACCAAATATTGT
TGGTAAAAATAGGTAAATATATAGATTTTTGTGTGCACCGTAGGTCCTAT
TNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGTAAATATATAGATTTTTGTGTG
CACCGTAGGTCCTATTTACTATGGTCCCCCGAAGTAGTCCTTCTGAAACC
CGAGGCATGTAGCGCTTAGTGGTTCACGTCATCCTTGTGTACCTTTCGCG
GAATTTTCTGTGTATTCGGTAAACTTTCTGGAGGCTTGTGCGTGCGTTCC
CGTCTAGAACGGAAACTGTGTCGAGCTTCCCACCAACGTGGTAGTTTCCG
GTTCTGGCTCCTCGTTTTCGCGGTTGGTGCTTACGGTGGGAGCACATGCT
ACGGCAGGAGAGGTGCACCATTTTTGTTTCTGAGGATTCTCTCGCTTGAA
GAAGTCTTAAGCCATTAGTCAGTCAACCAAAAACTGACTTTTAAGGACAA
ATCAAAGTTCAATGGTTGACGAAGAATCCCATGGCCTAGGTATTCCGAAC
TTTCTTTTTGCTGAACAAAAATGGAATTTCCGACGATTTTGGGCTAAGGA
GCCCCGTCAGCCAGAAAATGTTTTGGGCAAAATGAGCTACCTTTATCGTG
GCACGCTTCTGAAGTAGGTTTCTGTGTTGTGCGGGCGCTATGACGGAGTG
TCCTTGACGTATTTTTCTCTTCGCTCGCCCGCTGTGTTTTCCGGGTGAAA
AAAGGTGCTGCACACCCCCGGGCACTCGCTGGGGAGCATCACGCTGCTCT
TCAACCCGCCTCCCGGTCGCGAGGGTTCTTCTGGAGAGGATGAAGGCATT
GCCTTTACGGGAGACCACCTGGCGATGTCGGGACGCACGGGGGCGCTCAC
GGGCTTTCCCATGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7843:220..8535+

>mRNA_M-pyrifera_M_contig7843.18433.1 ID=mRNA_M-pyrifera_M_contig7843.18433.1|Name=mRNA_M-pyrifera_M_contig7843.18433.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1242bp|location=Sequence derived from alignment at M-pyrifera_M_contig7843:220..8535+ (Macrocystis pyrifera P11B4 male)
ATGTTCGCGTGTCCCACTTCGTCCATCAGGGTTGAGACCGCCGATCCCGT
CGCGAAGGACGCCCTGAACGATTTCCCCTTCCCCGTTGACGCGGAACGCC
TTCCTGATGTTCGCGTGTCCCACTTCGTCCATCAGGGTTGAGACCGCCGA
TCCCGTCGCGAAGGACGCCCTGAACGATTTCCCCTTCCCCGTTGACGCGG
AACGCCTTCCTGGTGTGTTCCATTTGGGCTTCCACGCGGAAAGTTCTTTC
GGCTGCTCTCCGTGGTTCGTGGTGTGTTCCATTTGGGCTTCCACGCGGAA
AGTTCTTTCGGCTGCTCTCCGTGGTTCGTGCAACGACCGGAAGGCAACGT
GATGATGGACAGCCCGAGGTTCCACGCCAGCCTGGCCAAAGCTCTCGAGA
GAAGAGGAGGCGTGTCCTTGATGGTCATGTCCCACATCGATGATGTCGGC
GACCACCAAAGGCAAGCCAACGACCGGAAGGCAACGTGATGATGGACAGC
CCGAGGTTCCACGCCAGCCTGGCCAAAGCTCTCGAGAGAAGAGGAGGCGT
GTCCTTGATGGTCATGTCCCACATCGATGATGTCGGCGACCACCAAAGGC
AAGCGTGGAAAGAACGCTTCCCGGAGATGCGAAGGGTGATGCACAAGGCC
GACGTGCAGGGCTACGGGGACACCAAAAACATCGAGGTGGAAAGAACGCT
TCCCGGAGATGCGAAGGGTGATGCACAAGGCCGACGTGCAGGGCTACGGG
GACACCAAAAACATCGAGGTGCAACTGGAAGAGAGCTCTGCTGACGGTCG
GATCGATGGGCTCGACTACTGGGACCTCGCCGACGATCTCCGGGTGCAAC
TGGAAGAGAGCTCTGCTGACGGTCGGATCGATGGGCTCGACTACTGGGAC
CTCGCCGACGATCTCCGGGTGCTGCACACCCCCGGGCACTCGCTGGGGAG
CATCACGCTGCTCTTCAACCCGCCTCCCGGTCGCGAGGGTTCTTCTGGAG
AGGATGAAGGCATTGCCTTTACGGGAGACCACCTGGCGATGTCGGGACGC
ACGGGGGCGCTCACGGGCTTTCCCATGTGAGTGCTGCACACCCCCGGGCA
CTCGCTGGGGAGCATCACGCTGCTCTTCAACCCGCCTCCCGGTCGCGAGG
GTTCTTCTGGAGAGGATGAAGGCATTGCCTTTACGGGAGACCACCTGGCG
ATGTCGGGACGCACGGGGGCGCTCACGGGCTTTCCCATGTGA
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