mRNA_M-pyrifera_M_contig78426.18431.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig78426.18431.1
Unique NamemRNA_M-pyrifera_M_contig78426.18431.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig78426.18431.1 vs. uniprot
Match: A0A518DHC9_9BACT (Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=2 Tax=Pirellulimonas nuda TaxID=2528009 RepID=A0A518DHC9_9BACT)

HSP 1 Score: 164 bits (414), Expect = 1.070e-45
Identity = 79/162 (48.77%), Postives = 109/162 (67.28%), Query Frame = 1
Query:    1 FQQANDDFISQLKMVVAGSDAKDLLHGLFGPIRNLYKRALEFGSFQQPELYAQIAHQPFDRLVQLSESLAELVGGELGKRVPAHHLLFDAPPVKLEVQFDISIYFPKEQTYRPLEDVSPVVSALARKQFDDIVKRVRLFVHPEMIDDWRQLKNASQLVSKAI 486
            F+ +    I  +        A +LL GLFGP R LYKR  ++  F+QPELY ++A +P+  L + +E  A +    LG+ V  H +LFD+PPV+LEV+FDI +Y+PKE+ YR L +VSPVV  LAR+QFDD VKRVRLFVHP + +D R+LKN   L+++AI
Sbjct:  260 FRMSEQTMIDAMTTAAGDGPAAELLDGLFGPTRVLYKRLAQYSLFEQPELYGRLARKPYPWLARCAEQFASVASTRLGRIVAPHEVLFDSPPVELEVEFDIDVYYPKERCYRRLGEVSPVVRTLAREQFDDYVKRVRLFVHPRVAEDLRRLKNLPDLLAEAI 421          
BLAST of mRNA_M-pyrifera_M_contig78426.18431.1 vs. uniprot
Match: A0A2E0B3X9_9BACT (Metal-dependent phosphohydrolase n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A2E0B3X9_9BACT)

HSP 1 Score: 164 bits (414), Expect = 1.550e-45
Identity = 79/163 (48.47%), Postives = 111/163 (68.10%), Query Frame = 1
Query:    1 FQQANDDFISQLKMVVAGSDAKDLLHGLFGPIRNLYKRALEFGSFQQPELYAQIAHQPFDRLVQLSESLAELVGGELGKRVPAHHLLFDAPPVKLEVQFDISIYFPKEQTYRPLEDVSPVVSALARKQFDDIVKRVRLFVHPEMIDDWRQLKNASQLVSKAIA 489
            F+      IS+L  +     A DLL GLFGP R+LYKR  +F  F+  E+Y ++A +P+  LV  SE+LAE +  E+G+R+  H ++FDAPPV LEV+F++S++F KE  YRPL +VSPVV  LARKQFDD VKRVR+FVHP + ++   + N   L+ +A+A
Sbjct:  278 FRLTEAPMISELTRLAGQGPAADLLSGLFGPTRSLYKRLAQFSYFENQEMYTRLARRPYPWLVACSETLAEGISREVGRRIAPHEVIFDAPPVGLEVEFNVSVHFSKESCYRPLGEVSPVVQTLARKQFDDYVKRVRVFVHPSLSEELSGVSNLQVLIEQAVA 440          
BLAST of mRNA_M-pyrifera_M_contig78426.18431.1 vs. uniprot
Match: A0A3A0DMV7_9BACT (Metal-dependent phosphohydrolase (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0DMV7_9BACT)

HSP 1 Score: 156 bits (394), Expect = 1.330e-44
Identity = 77/165 (46.67%), Postives = 104/165 (63.03%), Query Frame = 1
Query:    1 FQQANDDFISQLKMVVAGSDAKDLLHGLFGPIRNLYKRALEFGSFQQPELYAQIAHQPFDRLVQLSESLAELVGGELGKRVPAHHLLFDAPPVKLEVQFDISIYFPKEQTYRPLEDVSPVVSALARKQFDDIVKRVRLFVHPEMIDDWRQLKNASQLVSKAIAMS 495
            F+ A    I  L+       A DLL GLFGP+R LYKR  +   F++PE+Y ++A +P+  LV+ +E  A +    L + V  H +LFDAPP KLEV+F I ++F KE  YR L DVSPVV  LAR+QFDD VKRVRLF HP +  D R L   S ++++AI ++
Sbjct:   79 FRLAEQPMIDALRQAAGDGPAADLLDGLFGPVRRLYKRVCQCSLFERPEIYQRLARRPYPWLVRCAERFASIASSALSRVVAPHEILFDAPPTKLEVEFQIEVFFAKEGRYRQLGDVSPVVKTLAREQFDDYVKRVRLFAHPRVAADVRSLPGLSDMLAEAIDLA 243          
BLAST of mRNA_M-pyrifera_M_contig78426.18431.1 vs. uniprot
Match: A0A5Q4GFV9_9PLAN (HD domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A5Q4GFV9_9PLAN)

HSP 1 Score: 160 bits (406), Expect = 2.520e-44
Identity = 81/149 (54.36%), Postives = 100/149 (67.11%), Query Frame = 1
Query:    1 FQQANDDFISQLKMVVAGSDAKDLLHGLFGPIRNLYKRALEFGSFQQPELYAQIAHQPFDRLVQLSESLAELVGGELGKRVPAHHLLFDAPPVKLEVQFDISIYFPKEQTYRPLEDVSPVVSALARKQFDDIVKRVRLFVHPEMIDDWR 447
            F++     ISQL     G  A DLL GLFGP+R LYKR  +F  F+    Y Q+A +P   LV+ SE  A+ +   LG+RV    +LFDAPP+KLEVQF + I+FPKE  YRPL +VSPVVS LARKQFDD VKRVR+FVHP + +D R
Sbjct:  279 FRRTEPRMISQLCRTARGGPAADLLDGLFGPVRRLYKRLAQFSIFEHRHWYEQLARRPVAWLVRCSEVFADRISRRLGRRVAPTEVLFDAPPMKLEVQFQVEIFFPKEPCYRPLGEVSPVVSTLARKQFDDYVKRVRIFVHPRLAEDLR 427          
BLAST of mRNA_M-pyrifera_M_contig78426.18431.1 vs. uniprot
Match: A0A2E8D6E7_9PLAN (Metal-dependent phosphohydrolase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8D6E7_9PLAN)

HSP 1 Score: 159 bits (401), Expect = 1.290e-43
Identity = 77/162 (47.53%), Postives = 102/162 (62.96%), Query Frame = 1
Query:    1 FQQANDDFISQLKMVVAGSDAKDLLHGLFGPIRNLYKRALEFGSFQQPELYAQIAHQPFDRLVQLSESLAELVGGELGKRVPAHHLLFDAPPVKLEVQFDISIYFPKEQTYRPLEDVSPVVSALARKQFDDIVKRVRLFVHPEMIDDWRQLKNASQLVSKAI 486
            F+      I QL        A +LL+GLFGP R  YKR  EF  FQ P +Y Q+A +P+   V  +E  A L+  E+G+R+  H +LFD PP+KLEV+FDI ++FPKE+ YR L DVSPVV  LAR+QFDD VKRVR+F HP + ++   + N   L+  AI
Sbjct:  278 FRLPEQAVIDQLLQAAGSGPASELLNGLFGPARRTYKRLAEFSYFQTPGIYEQLARRPYPWSVACAEEFASLLSREVGRRIAPHEMLFDVPPIKLEVEFDIEVHFPKEECYRELGDVSPVVRTLARQQFDDYVKRVRVFAHPALAEEASHVANLDDLLGDAI 439          
BLAST of mRNA_M-pyrifera_M_contig78426.18431.1 vs. uniprot
Match: A0A5C6CPF3_9BACT (HD domain protein n=2 Tax=Bythopirellula TaxID=1400386 RepID=A0A5C6CPF3_9BACT)

HSP 1 Score: 156 bits (394), Expect = 1.350e-42
Identity = 74/165 (44.85%), Postives = 106/165 (64.24%), Query Frame = 1
Query:    1 FQQANDDFISQLKMVVAGSDAKDLLHGLFGPIRNLYKRALEFGSFQQPELYAQIAHQPFDRLVQLSESLAELVGGELGKRVPAHHLLFDAPPVKLEVQFDISIYFPKEQTYRPLEDVSPVVSALARKQFDDIVKRVRLFVHPEMIDDWRQLKNASQLVSKAIAMS 495
            F+      I  L        A++LL GLFGP+R LYKR  ++  FQ+P+LY ++A +P+  L+  +E+ A L    L + V  H +LFDAPPVKLEV+F I ++FPKE  +R L D+SPVV  LAR+QFDD VKRVR+F HP + DD + L    +L+++A  ++
Sbjct:  278 FRMTERPLIDALVNAAGDGPARELLDGLFGPVRRLYKRVTQYSLFQEPQLYQRLARKPYPWLIHCAENFAGLASTALSRIVAPHEVLFDAPPVKLEVEFQIDVHFPKEHCFRRLGDISPVVKTLAREQFDDYVKRVRVFAHPRVADDLQSLPRLPELIAEAAELT 442          
BLAST of mRNA_M-pyrifera_M_contig78426.18431.1 vs. uniprot
Match: A0A7V4HVM9_9BACT (HD domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V4HVM9_9BACT)

HSP 1 Score: 155 bits (393), Expect = 1.900e-42
Identity = 74/162 (45.68%), Postives = 102/162 (62.96%), Query Frame = 1
Query:    1 FQQANDDFISQLKMVVAGSDAKDLLHGLFGPIRNLYKRALEFGSFQQPELYAQIAHQPFDRLVQLSESLAELVGGELGKRVPAHHLLFDAPPVKLEVQFDISIYFPKEQTYRPLEDVSPVVSALARKQFDDIVKRVRLFVHPEMIDDWRQLKNASQLVSKAI 486
            F+   +  + +L+       A DLL GLFGP R LYKR  ++  F+Q ++Y  +A +P+  L   +E  A L    LG+ V  H +LFDAPPV  EV+ D+ +YFPKE  YRPL++VSPV+  LA++QFDD VKRVR+F HP +  D R+L   S LV KA+
Sbjct:  278 FRLEENPMVEELQRAAGAGPAGDLLRGLFGPKRQLYKRLAQYSLFEQRDIYGMLARKPYPWLAACAEQFAALASTALGRVVAPHEILFDAPPVSREVEIDVDVYFPKEARYRPLDEVSPVIRTLAQEQFDDYVKRVRVFAHPRIAADLRRLSRLSDLVRKAV 439          
BLAST of mRNA_M-pyrifera_M_contig78426.18431.1 vs. uniprot
Match: A0A5C5XXV0_9BACT (HDc domain-containing protein n=2 Tax=Posidoniimonas TaxID=2795979 RepID=A0A5C5XXV0_9BACT)

HSP 1 Score: 155 bits (392), Expect = 2.660e-42
Identity = 78/151 (51.66%), Postives = 104/151 (68.87%), Query Frame = 1
Query:   40 MVVAGSD--AKDLLHGLFGPIRNLYKRALEFGSFQQPELYAQIAHQPFDRLVQLSESLAELVGGELGKRVPAHHLLFDAPPVKLEVQFDISIYFPKEQTYRPLEDVSPVVSALARKQFDDIVKRVRLFVHPEMIDDWRQLKNASQLVSKAI 486
            M  A  D  A +LL GLFGP R LYKR  ++  F++P LYA++A +PF  L  ++E  A +    + + V  H +LFDAPPV LEV+F+I +YF K++ YR L DVSPVV  LAR+QFDD VKRVRLFVHP + DD R L+N  +L+++AI
Sbjct:  289 MCAAAGDGPAAELLDGLFGPSRRLYKRLAQYSLFEEPHLYARLARKPFPWLSAVAEQFASVASTAMSRVVAPHEVLFDAPPVGLEVEFNIDVYFAKQRAYRRLGDVSPVVRTLAREQFDDYVKRVRLFVHPRVADDMRDLRNLPELLAEAI 439          
BLAST of mRNA_M-pyrifera_M_contig78426.18431.1 vs. uniprot
Match: A0A7V3JQF2_9BACT (HD domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V3JQF2_9BACT)

HSP 1 Score: 154 bits (390), Expect = 5.420e-42
Identity = 77/161 (47.83%), Postives = 103/161 (63.98%), Query Frame = 1
Query:    1 FQQANDDFISQLKMVVAGSDAKDLLHGLFGPIRNLYKRALEFGSFQQPELYAQIAHQPFDRLVQLSESLAELVGGELGKRVPAHHLLFDAPPVKLEVQFDISIYFPKEQTYRPLEDVSPVVSALARKQFDDIVKRVRLFVHPEMIDDWRQLKNASQLVSKA 483
            F+      ++QL+   AG  A +LL GLFGP R LYKR  ++  F+  E+Y ++A +P+  LV  +E  A L+   LG  V  H +LFDAPPV+ E+Q D+ IY+ KE  YRPL DVSPVV ALA +QFDD VKRVR+FVHP + +  R+L     LV +A
Sbjct:  279 FRLTEGPLVAQLQEAAAGGPAGELLAGLFGPTRRLYKRLAQYSYFEHQEVYERLARRPYPWLVACAEQFASLLASALGHSVAPHEVLFDAPPVEREMQIDVDIYYAKEDRYRPLGDVSPVVRALAEEQFDDYVKRVRVFVHPRLAEGARRLSRIDHLVLEA 439          
BLAST of mRNA_M-pyrifera_M_contig78426.18431.1 vs. uniprot
Match: A0A7C7QZE5_9PLAN (HD domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7QZE5_9PLAN)

HSP 1 Score: 154 bits (388), Expect = 1.050e-41
Identity = 73/161 (45.34%), Postives = 105/161 (65.22%), Query Frame = 1
Query:    1 FQQANDDFISQLKMVVAGSDAKDLLHGLFGPIRNLYKRALEFGSFQQPELYAQIAHQPFDRLVQLSESLAELVGGELGKRVPAHHLLFDAPPVKLEVQFDISIYFPKEQTYRPLEDVSPVVSALARKQFDDIVKRVRLFVHPEMIDDWRQLKNASQLVSKA 483
            F+ +  + I +L    +G  A +LL GLFGP+R LYKR   +  F+  ++Y ++A +P+  LV  SE LA+L+    G++   H +LFDAPPV  EV+F + +Y+PKE  YRPL +VSPVV  LA +QFDD VKRVR+F HP +    R+L N ++LV +A
Sbjct:  278 FRLSESEMIRELCRAGSGQPAGELLEGLFGPVRRLYKRLAHYSFFEHGDVYRRLARRPYPWLVACSEQLAQLLSAATGQKAAGHEILFDAPPVAREVEFKVDVYYPKEDRYRPLAEVSPVVRTLAHEQFDDYVKRVRIFAHPRVAATLRRLDNLTELVHQA 438          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78426.18431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518DHC9_9BACT1.070e-4548.77Deoxyguanosinetriphosphate triphosphohydrolase-lik... [more]
A0A2E0B3X9_9BACT1.550e-4548.47Metal-dependent phosphohydrolase n=2 Tax=Planctomy... [more]
A0A3A0DMV7_9BACT1.330e-4446.67Metal-dependent phosphohydrolase (Fragment) n=1 Ta... [more]
A0A5Q4GFV9_9PLAN2.520e-4454.36HD domain-containing protein n=1 Tax=Planctomyceta... [more]
A0A2E8D6E7_9PLAN1.290e-4347.53Metal-dependent phosphohydrolase n=1 Tax=Planctomy... [more]
A0A5C6CPF3_9BACT1.350e-4244.85HD domain protein n=2 Tax=Bythopirellula TaxID=140... [more]
A0A7V4HVM9_9BACT1.900e-4245.68HD domain-containing protein n=1 Tax=Planctomycete... [more]
A0A5C5XXV0_9BACT2.660e-4251.66HDc domain-containing protein n=2 Tax=Posidoniimon... [more]
A0A7V3JQF2_9BACT5.420e-4247.83HD domain-containing protein n=1 Tax=Planctomycete... [more]
A0A7C7QZE5_9PLAN1.050e-4145.34HD domain-containing protein n=1 Tax=Planctomyceta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78426contigM-pyrifera_M_contig78426:2..511 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score155.2
Seed ortholog evalue2.7e-35
Seed eggNOG ortholog530564.Psta_2885
KEGG koko:K06885
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG1078 HD superfamily
EggNOG OGs2IWWJ@203682,COG1078@1,COG1078@2
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size510
Cds size510
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816686.4325204-CDS-M-pyrifera_M_contig78426:1..5111622816686.4325204-CDS-M-pyrifera_M_contig78426:1..511Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78426 2..511 +
1692278119.4090753-CDS-M-pyrifera_M_contig78426:1..5111692278119.4090753-CDS-M-pyrifera_M_contig78426:1..511Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78426 2..511 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78426.18431.1prot_M-pyrifera_M_contig78426.18431.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig78426 2..511 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig78426.18431.1

>prot_M-pyrifera_M_contig78426.18431.1 ID=prot_M-pyrifera_M_contig78426.18431.1|Name=mRNA_M-pyrifera_M_contig78426.18431.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp
FQQANDDFISQLKMVVAGSDAKDLLHGLFGPIRNLYKRALEFGSFQQPEL
YAQIAHQPFDRLVQLSESLAELVGGELGKRVPAHHLLFDAPPVKLEVQFD
ISIYFPKEQTYRPLEDVSPVVSALARKQFDDIVKRVRLFVHPEMIDDWRQ
LKNASQLVSKAIAMSLIDP*
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mRNA from alignment at M-pyrifera_M_contig78426:2..511+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig78426.18431.1 ID=mRNA_M-pyrifera_M_contig78426.18431.1|Name=mRNA_M-pyrifera_M_contig78426.18431.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig78426:2..511+ (Macrocystis pyrifera P11B4 male)
TTTCAGCAAGCCAACGACGATTTCATTTCGCAATTGAAGATGGTCGTTGC CGGAAGTGACGCCAAAGATCTTCTGCACGGCTTGTTCGGGCCCATTCGCA ATCTGTACAAACGAGCGCTCGAATTCGGTTCGTTTCAACAACCCGAACTT TACGCTCAAATCGCACATCAGCCGTTCGATCGGCTGGTTCAACTCAGCGA ATCGCTTGCTGAACTCGTTGGGGGCGAATTGGGGAAGAGAGTTCCTGCGC ATCATTTATTGTTCGACGCGCCGCCTGTAAAGCTCGAAGTGCAGTTCGAC ATTTCGATCTACTTTCCCAAAGAACAAACCTATCGCCCGCTCGAAGACGT ATCGCCGGTGGTTTCCGCTTTGGCGCGTAAACAGTTCGACGACATTGTAA AACGTGTGCGGTTGTTCGTGCATCCTGAAATGATTGACGACTGGCGCCAA TTGAAGAATGCCAGCCAACTGGTTTCAAAGGCGATCGCCATGAGCCTCAT TGACCCGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig78426:2..511+

>mRNA_M-pyrifera_M_contig78426.18431.1 ID=mRNA_M-pyrifera_M_contig78426.18431.1|Name=mRNA_M-pyrifera_M_contig78426.18431.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig78426:2..511+ (Macrocystis pyrifera P11B4 male)
TTTCAGCAAGCCAACGACGATTTCATTTCGCAATTGAAGATGGTCGTTGC
CGGAAGTGACGCCAAAGATCTTCTGCACGGCTTGTTCGGGCCCATTCGCA
ATCTGTACAAACGAGCGCTCGAATTCGGTTCGTTTCAACAACCCGAACTT
TACGCTCAAATCGCACATCAGCCGTTCGATCGGCTGGTTCAACTCAGCGA
ATCGCTTGCTGAACTCGTTGGGGGCGAATTGGGGAAGAGAGTTCCTGCGC
ATCATTTATTGTTCGACGCGCCGCCTGTAAAGCTCGAAGTGCAGTTCGAC
ATTTCGATCTACTTTCCCAAAGAACAAACCTATCGCCCGCTCGAAGACGT
ATCGCCGGTGGTTTCCGCTTTGGCGCGTAAACAGTTCGACGACATTGTAA
AACGTGTGCGGTTGTTCGTGCATCCTGAAATGATTGACGACTGGCGCCAA
TTGAAGAATGCCAGCCAACTGGTTTCAAAGGCGATCGCCATGAGCCTCAT
TGACCCGTAGTTTCAGCAAGCCAACGACGATTTCATTTCGCAATTGAAGA
TGGTCGTTGCCGGAAGTGACGCCAAAGATCTTCTGCACGGCTTGTTCGGG
CCCATTCGCAATCTGTACAAACGAGCGCTCGAATTCGGTTCGTTTCAACA
ACCCGAACTTTACGCTCAAATCGCACATCAGCCGTTCGATCGGCTGGTTC
AACTCAGCGAATCGCTTGCTGAACTCGTTGGGGGCGAATTGGGGAAGAGA
GTTCCTGCGCATCATTTATTGTTCGACGCGCCGCCTGTAAAGCTCGAAGT
GCAGTTCGACATTTCGATCTACTTTCCCAAAGAACAAACCTATCGCCCGC
TCGAAGACGTATCGCCGGTGGTTTCCGCTTTGGCGCGTAAACAGTTCGAC
GACATTGTAAAACGTGTGCGGTTGTTCGTGCATCCTGAAATGATTGACGA
CTGGCGCCAATTGAAGAATGCCAGCCAACTGGTTTCAAAGGCGATCGCCA
TGAGCCTCATTGACCCGTAG
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