mRNA_M-pyrifera_M_contig7842.18430.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7842.18430.1 vs. uniprot
Match: D7G7T8_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T8_ECTSI) HSP 1 Score: 363 bits (932), Expect = 4.750e-123 Identity = 176/215 (81.86%), Postives = 201/215 (93.49%), Query Frame = 1 Query: 1 QAAEAMDRAAAAPMERGDKVPARYVRAFCGNEKHALERWEATQRWRKDNEVDAILNEPQPYFRDIRRYFPSNISGRSRGGHIVVYEKLGDVDMRTLRRELGVTVPVLLRHWIFVSEYMYRVLQPTDSAQQVTVVDMKGVRIQSLAGKMQEYVQAAAQLARLYYVERCHKTYIVNAPAWFGLAFRVVSPFLSARTRQKIRTLGSELSALQDDIDPK 645 +AAEAMDRAAAAP+ K+PARYVRAFCGNEKHALERW+AT +WRK+NE+DAILNEPQ +F DIRRYFPS++SGRSRGGHIVVY+KLG VDMRTLRR+LGVTVP+LLRHWIFVSEYMYRVLQPTDSAQQ+ + DMK VRIQ+LAGK+QEYV+A AQLARL+YVERCHKT++VNAPAWFGL+FRVVSPFLSARTRQKIR LGS+LSALQD+I P+ Sbjct: 113 EAAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHALERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYDKLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLSALQDEIAPQ 327
BLAST of mRNA_M-pyrifera_M_contig7842.18430.1 vs. uniprot
Match: A0A6H5LAB2_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAB2_9PHAE) HSP 1 Score: 364 bits (935), Expect = 2.530e-120 Identity = 176/215 (81.86%), Postives = 201/215 (93.49%), Query Frame = 1 Query: 1 QAAEAMDRAAAAPMERGDKVPARYVRAFCGNEKHALERWEATQRWRKDNEVDAILNEPQPYFRDIRRYFPSNISGRSRGGHIVVYEKLGDVDMRTLRRELGVTVPVLLRHWIFVSEYMYRVLQPTDSAQQVTVVDMKGVRIQSLAGKMQEYVQAAAQLARLYYVERCHKTYIVNAPAWFGLAFRVVSPFLSARTRQKIRTLGSELSALQDDIDPK 645 +AAEAMDRAAAAP+ K+PARYVRAFCGNEKHALERW+AT +WRK+NE+DAILNEPQ +F DIRRYFPS++SGRSRGGHIVVYEKLG VDMRTLRR+LGVTVP+LLRHWIFVSEYMYRVLQPTDSAQQ+ + DMK VRIQ+LAGK+QEYV+A AQLARL+YVERCHKT++VNAPAWFGL+FRVVSPFLSARTRQKIR LGS+L+ LQD+IDP+ Sbjct: 111 EAAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHALERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLGAVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLTVLQDEIDPQ 325
BLAST of mRNA_M-pyrifera_M_contig7842.18430.1 vs. uniprot
Match: A0A7S2V2B7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B7_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.700e-45 Identity = 78/193 (40.41%), Postives = 128/193 (66.32%), Query Frame = 1 Query: 58 VPARYVRAFCGNEKHALERWEATQRWRKDNEVDAILNEPQPYFRDIRRYFPSNISGRSRGGHIVVYEKLGDVDMRTLRRELGVTVPVLLRHWIFVSEYMYRVLQPTDSAQQVTVVDMKGVRIQSLAGKMQEYVQAAAQLARLYYVERCHKTYIVNAPAWFGLAFRVVSPFLSARTRQKIRTLGSELSALQDDI 636 VP RY+++ G+ + A +RW T +WRK+N VD +L + QP+F I++++P I R R GH V Y+KLG++ + L++ GV V LL H+IF SEY+++V++P D+ V V D++G+ SL G + E+++ +++ +Y ER +KT+I+NAP WF FRVV+P L +T +KI LG++L+ + + I Sbjct: 163 VPLRYLKSCKGDVEEAQKRWNTTVKWRKENGVDDVLQKAQPHFHTIKKWYPHFIHSRDREGHPVYYDKLGEIKVEKLQQN-GVDVEELLEHFIFHSEYLWKVVEPDDNFLMVAVEDVQGINAFSLQGVVFEFIKHVSKMFSDHYCERSYKTFIINAPGWFAWIFRVVAPLLDPKTTEKISILGTDLTEMHEAI 354
BLAST of mRNA_M-pyrifera_M_contig7842.18430.1 vs. uniprot
Match: A0A485K5A0_9STRA (Aste57867_436 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K5A0_9STRA) HSP 1 Score: 157 bits (396), Expect = 4.790e-44 Identity = 69/184 (37.50%), Postives = 120/184 (65.22%), Query Frame = 1 Query: 67 RYVRAFCGNEKHALERWEATQRWRKDNEVDAILNEPQPYFRDIRRYFPSNISGRSRGGHIVVYEKLGDVDMRTLRRELGVTVPVLLRHWIFVSEYMYRVLQPTDSAQQVTVVDMKGVRIQSLAGKMQEYVQAAAQLARLYYVERCHKTYIVNAPAWFGLAFRVVSPFLSARTRQKIRTLGSELS 618 R++ A G+E+ RWEAT++WR++N +D +L+EPQP+F I++ +P G+S+ GH V YE+LG VD +TL++ G+ + LLRH++F++E++++VL+P+DS + +TV+D++ L G + +++ A A +Y ER + ++N P WF + +R +SP + T+ KIR S S Sbjct: 31 RFIAAEKGDEEKGRHRWEATRQWRRENNIDGLLHEPQPHFDIIKKNYPQYFHGKSKNGHCVYYERLGYVDFKTLKKS-GLNMDQLLRHYMFITEFLWKVLEPSDSGRSITVLDVENFGFYDLTGDVTSFIRQAMAFAAAHYPERSAQIIVINVPGWFYMTWRAMSPMIDPVTKAKIRICNSSTS 213
BLAST of mRNA_M-pyrifera_M_contig7842.18430.1 vs. uniprot
Match: A0A7S3Y7R1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7R1_HETAK) HSP 1 Score: 161 bits (407), Expect = 5.340e-43 Identity = 76/194 (39.18%), Postives = 120/194 (61.86%), Query Frame = 1 Query: 25 AAAAPMERGDKVPARYVRAFCGNEKHALERWEATQRWRKDNEVDAILNEPQPYFRDIRRYFPSNISGRSRGGHIVVYEKLGDVDMRTLRRELGVTVPVLLRHWIFVSEYMYRVLQPTDSAQQVTVVDMKGVRIQSLAGKMQEYVQAAAQLARLYYVERCHKTYIVNAPAWFGLAFRVVSPFLSARTRQKIRTLG 606 AAA P G +P RY+R G+ + A RW T RWR++ VD IL+EPQPYF I++Y+P R R G + YE++G D+ +R GVT+ L+RH++FVSE+++R ++ D AQ +T++D++G G +E+ Q + + + +YVER +K +++NAP WF + ++VV P L T++KI G Sbjct: 149 AAAGPTAGGAALPDRYIRGCDGDLEEARRRWALTLRWRREQNVDGILDEPQPYFFVIKKYYPHFTYKRGRNGCVTYYEQVGRADIEAMRAR-GVTIAALVRHYVFVSEFLWRRIEADDDAQAITIMDIEGCGFSQFKGDTKEFFQQCSSVIQSHYVERSNKIFVINAPGWFNMIWKVVRPMLHENTQRKISICG 341
BLAST of mRNA_M-pyrifera_M_contig7842.18430.1 vs. uniprot
Match: A0A835YIT9_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIT9_9STRA) HSP 1 Score: 157 bits (397), Expect = 3.940e-42 Identity = 71/150 (47.33%), Postives = 108/150 (72.00%), Query Frame = 1 Query: 154 DAILNEPQPYFRDIRRYFPSNISGRSRGGHIVVYEKLGDVDMRTLRRELGVTVPVLLRHWIFVSEYMYRVLQPTDSAQQVTVVDMKGVRIQSLAGKMQEYVQAAAQLARLYYVERCHKTYIVNAPAWFGLAFRVVSPFLSARTRQKIRTL 603 D IL+EPQP F I+++FP+ I GR R GH+VVYEK+G + M+ L + GVT+P+LLRH++F EY++RV++P AQ +T+ D++G+ + L G E+ + AAQ A +YVERC++T+I+N+PAWF L + +SPF+ RT++K L Sbjct: 96 DMILSEPQPMFNIIKQHFPAFIYGRGRKGHVVVYEKVGSIHMKELAHQ-GVTLPMLLRHYVFSMEYLWRVVEPRGDAQLITIQDVQGIGLSDLTGMALEFAKGAAQTASKHYVERCYRTFIINSPAWFPLLWAAISPFVPLRTKKKASAL 244
BLAST of mRNA_M-pyrifera_M_contig7842.18430.1 vs. uniprot
Match: A0A835Z260_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z260_9STRA) HSP 1 Score: 150 bits (378), Expect = 4.370e-41 Identity = 71/196 (36.22%), Postives = 128/196 (65.31%), Query Frame = 1 Query: 55 KVPARYVRAFCGNEKHALERWEATQRWRKDNEVDAILNEPQPYFRDIRRYFPSNISGRSRGGHIVVYEKLGDVDMRTLRRELGVTVPVLLRHWIFVSEYMYRVLQPTDSAQQVTVVDMKGVRIQSLAGKMQEYVQAAAQLARLYYVERCHKTYIVNAPAWFGLAFRVVSPFLSARTRQKIRTLGSE-LSALQDDID 639 ++P RY++ G+ A RW T +WRK +VD +L+EPQ +F I++Y+P +S R++ G +V YE G+ D++ LR E GV + L+RH+I+++E+++R L + ++ ++++D++GV + AG+++EY+ AA+L +Y ER K +++NAP WF + ++V+SP + A TR K+ G+ + L + ID Sbjct: 43 EIPIRYIKGMEGDMAEARRRWVETLKWRKSYKVDTMLDEPQLHFDAIKKYYPHYVSKRAKNGCLVYYEIPGETDLKKLR-ENGVDIDQLIRHYIYITEFIWRRLDTGEESKLLSIMDLRGVSLAQFAGEVREYMVRAAKLIGAHYPERSFKIFVLNAPWWFNMVWKVLSPLMHANTRAKVVVCGATYMDKLSELID 237
BLAST of mRNA_M-pyrifera_M_contig7842.18430.1 vs. uniprot
Match: A0A3R6Z8R0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z8R0_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.320e-40 Identity = 71/177 (40.11%), Postives = 116/177 (65.54%), Query Frame = 1 Query: 67 RYVRAFCGNEKHALERWEATQRWRKDNEVDAILNEPQPYFRDIRRYFPSNISGRSRGGHIVVYEKLGDVDMRTLRRELGVTVPVLLRHWIFVSEYMYRVLQPTDSAQQVTVVDMKGVRIQSLAGKMQEYVQAAAQLARLYYVERCHKTYIVNAPAWFGLAFRVVSPFLSARTRQKIR 597 R++ A GN + R+E+T +WR++N VD +L EPQP+F I++Y+P G+S GH V YEK+G +D++ ++ G+T+ LLRH+++++EYM+ +L+P+DS + VTV+D+ G+ LAG + +V+ A Y ER + +IVN P WF + + VVSP + T++KIR Sbjct: 321 RFIAAEKGNVEKGRARYESTLQWRRENNVDGMLQEPQPHFHLIKKYYPQYFHGKSIKGHCVYYEKVGKIDLKAMKAA-GLTIDQLLRHYVYLTEYMWTILEPSDSGRSVTVLDVNGIGFYDLAGDVLLFVRQATGFVSANYPERSAQIFIVNVPTWFNMVWSVVSPMIDPVTKEKIR 496
BLAST of mRNA_M-pyrifera_M_contig7842.18430.1 vs. uniprot
Match: A0A024UU13_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UU13_9STRA) HSP 1 Score: 154 bits (390), Expect = 5.420e-40 Identity = 71/177 (40.11%), Postives = 116/177 (65.54%), Query Frame = 1 Query: 67 RYVRAFCGNEKHALERWEATQRWRKDNEVDAILNEPQPYFRDIRRYFPSNISGRSRGGHIVVYEKLGDVDMRTLRRELGVTVPVLLRHWIFVSEYMYRVLQPTDSAQQVTVVDMKGVRIQSLAGKMQEYVQAAAQLARLYYVERCHKTYIVNAPAWFGLAFRVVSPFLSARTRQKIR 597 R++ A GN + R+E+T +WR++N VD +L EPQP+F I++Y+P G+S GH V YEK+G +D++ ++ G+T+ LLRH+++++EYM+ +L+P+DS + VTV+D+ G+ LAG + +V+ A Y ER + +IVN P WF + + VVSP + T++KIR Sbjct: 477 RFIAAEKGNVEKGRARYESTLQWRRENNVDGMLQEPQPHFHLIKKYYPQYFHGKSIKGHCVYYEKVGKIDLKAMKAA-GLTIDQLLRHYVYLTEYMWTILEPSDSGRSVTVLDVNGIGFYDLAGDVLLFVRQATGFVSANYPERSAQIFIVNVPTWFNMVWSVVSPMIDPVTKEKIR 652
BLAST of mRNA_M-pyrifera_M_contig7842.18430.1 vs. uniprot
Match: A0A024USX5_9STRA (CRAL-TRIO domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USX5_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.010e-39 Identity = 68/193 (35.23%), Postives = 120/193 (62.18%), Query Frame = 1 Query: 67 RYVRAFCGNEKHALERWEATQRWRKDNEVDAILNEPQPYFRDIRRYFPSNISGRSRGGHIVVYEKLGDVDMRTLRRELGVTVPVLLRHWIFVSEYMYRVLQPTDSAQQVTVVDMKGVRIQSLAGKMQEYVQAAAQLARLYYVERCHKTYIVNAPAWFGLAFRVVSPFLSARTRQKIR--TLGSELSALQDDID 639 R++ A GN + +R+E+T WR+DN +D +++EPQ +F I++ +P G+S+ GH V YEKLG V+ + L++ G+++ LLRH+++++EY+++VL P+D+ + +TV D++ L G + +++ A A +Y ER + Y++N PAWF + +R +S + T+ KIR T G+ L ID Sbjct: 28 RFIAAEKGNAEKGRQRYESTLSWRRDNRIDTLIDEPQVHFHLIKKNYPQYFHGKSKNGHRVYYEKLGSVNFKALKKS-GLSMDQLLRHYMYITEYLWKVLDPSDNGRSITVFDVENFGFYDLTGDVTSFIRQAMAFAGEHYPERSAQIYVINVPAWFHITYRAMSAMIDPVTKAKIRVCTSGAATEELLASID 219 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7842.18430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7842.18430.1 >prot_M-pyrifera_M_contig7842.18430.1 ID=prot_M-pyrifera_M_contig7842.18430.1|Name=mRNA_M-pyrifera_M_contig7842.18430.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp MDRAAAAPMERGDKVPARYVRAFCGNEKHALERWEATQRWRKDNEVDAILback to top mRNA from alignment at M-pyrifera_M_contig7842:8837..12321+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7842.18430.1 ID=mRNA_M-pyrifera_M_contig7842.18430.1|Name=mRNA_M-pyrifera_M_contig7842.18430.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3485bp|location=Sequence derived from alignment at M-pyrifera_M_contig7842:8837..12321+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7842:8837..12321+ >mRNA_M-pyrifera_M_contig7842.18430.1 ID=mRNA_M-pyrifera_M_contig7842.18430.1|Name=mRNA_M-pyrifera_M_contig7842.18430.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1260bp|location=Sequence derived from alignment at M-pyrifera_M_contig7842:8837..12321+ (Macrocystis pyrifera P11B4 male)back to top |