mRNA_M-pyrifera_M_contig78301.18411.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig78301.18411.1
Unique NamemRNA_M-pyrifera_M_contig78301.18411.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig78301.18411.1 vs. uniprot
Match: A0A518A683_9PLAN (Ribosomal-protein-alanine N-acetyltransferase n=9 Tax=Gimesia TaxID=1649453 RepID=A0A518A683_9PLAN)

HSP 1 Score: 197 bits (500), Expect = 1.370e-62
Identity = 94/97 (96.91%), Postives = 97/97 (100.00%), Query Frame = 1
Query:    1 GMGNEEPVDCGTIQAIVPSRIMGAIQNVGITPKHRGLGLGRALVTKCLLGFREAGVKRAYLEVTAENEPAINLYRSIGFRLTRTLYKPSHYVEAPSL 291
            GMGNEEPVDCGTIQAIVPSRIMGAIQNVGITPKHRGLGLGRALVTKCL+GFREAGVKRAYLEVTAENEPAINLYRSIGFRLTRTLYKPSHY+EAPS+
Sbjct:   95 GMGNEEPVDCGTIQAIVPSRIMGAIQNVGITPKHRGLGLGRALVTKCLIGFREAGVKRAYLEVTAENEPAINLYRSIGFRLTRTLYKPSHYIEAPSI 191          
BLAST of mRNA_M-pyrifera_M_contig78301.18411.1 vs. uniprot
Match: A0A517VXH4_9PLAN (Ribosomal-protein-alanine N-acetyltransferase n=3 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VXH4_9PLAN)

HSP 1 Score: 182 bits (462), Expect = 1.690e-56
Identity = 85/96 (88.54%), Postives = 93/96 (96.88%), Query Frame = 1
Query:    1 GMGNEEPVDCGTIQAIVPSRIMGAIQNVGITPKHRGLGLGRALVTKCLLGFREAGVKRAYLEVTAENEPAINLYRSIGFRLTRTLYKPSHYVEAPS 288
            GMGNE+PVDCGTIQAIVPS+IMGA+QNVGITPKHRG+GLGRALV KCL+GFREAG+KR YLEVTA+NEPAINLYRSIGFRLTRTLYKPS +VEAPS
Sbjct:  118 GMGNEDPVDCGTIQAIVPSKIMGAVQNVGITPKHRGMGLGRALVNKCLIGFREAGMKRVYLEVTADNEPAINLYRSIGFRLTRTLYKPSQHVEAPS 213          
BLAST of mRNA_M-pyrifera_M_contig78301.18411.1 vs. uniprot
Match: A0A3D3QYA3_9PLAN (N-acetyltransferase n=9 Tax=Planctomycetaceae TaxID=126 RepID=A0A3D3QYA3_9PLAN)

HSP 1 Score: 178 bits (451), Expect = 3.880e-55
Identity = 87/97 (89.69%), Postives = 91/97 (93.81%), Query Frame = 1
Query:    1 GMGNEEPVDCGTIQAIVPSRIMGAIQNVGITPKHRGLGLGRALVTKCLLGFREAGVKRAYLEVTAENEPAINLYRSIGFRLTRTLYKPSHYVEAPSL 291
            G G E+ VDCGTIQAIVPSRIMGAIQNVGITP+HRGLGLGRALVTKCL+GFR A VKRAYLEVTA+NEPAINLYRSIGFRLTRTLYKPSHYVEA SL
Sbjct:   95 GTGKEDAVDCGTIQAIVPSRIMGAIQNVGITPEHRGLGLGRALVTKCLIGFRAAKVKRAYLEVTADNEPAINLYRSIGFRLTRTLYKPSHYVEASSL 191          
BLAST of mRNA_M-pyrifera_M_contig78301.18411.1 vs. uniprot
Match: A0A836RL64_9PLAN (N-acetyltransferase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836RL64_9PLAN)

HSP 1 Score: 123 bits (309), Expect = 1.280e-33
Identity = 55/83 (66.27%), Postives = 71/83 (85.54%), Query Frame = 1
Query:   16 EPVDCGTIQAIVPSRIMGAIQNVGITPKHRGLGLGRALVTKCLLGFREAGVKRAYLEVTAENEPAINLYRSIGFRLTRTLYKP 264
            +P+DCGTIQ +  +  +GAIQNVG+ P+HRGLGLGRAL+ K L GF++AG+ R YLEVTA N+PA++LYRS+GFRLTRT+YKP
Sbjct:   98 KPIDCGTIQGVGRAGGLGAIQNVGVVPEHRGLGLGRALMLKALRGFQDAGLDRVYLEVTASNQPAVHLYRSLGFRLTRTMYKP 180          
BLAST of mRNA_M-pyrifera_M_contig78301.18411.1 vs. uniprot
Match: A0A2E7D339_9PLAN (N-acetyltransferase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D339_9PLAN)

HSP 1 Score: 120 bits (300), Expect = 1.940e-32
Identity = 53/83 (63.86%), Postives = 70/83 (84.34%), Query Frame = 1
Query:   25 DCGTIQAIVPSRIMGAIQNVGITPKHRGLGLGRALVTKCLLGFREAGVKRAYLEVTAENEPAINLYRSIGFRLTRTLYKPSHY 273
            DC TIQ +  + +MGAIQNVG+ P+HRG+G+GRALV + L GFR+AG++R YLEVTA+N+ A+NLYRSIGFRLTRT+YK + +
Sbjct:   91 DCATIQGVKQTSVMGAIQNVGVIPEHRGMGIGRALVLQSLQGFRDAGMRRVYLEVTAQNKAAVNLYRSIGFRLTRTMYKAADF 173          
BLAST of mRNA_M-pyrifera_M_contig78301.18411.1 vs. uniprot
Match: A0A517ZRH3_9PLAN (Putative acetyltransferase n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZRH3_9PLAN)

HSP 1 Score: 119 bits (297), Expect = 8.330e-32
Identity = 56/87 (64.37%), Postives = 68/87 (78.16%), Query Frame = 1
Query:    1 GMGNEEPVDCGTIQAIVPSRIMGAIQNVGITPKHRGLGLGRALVTKCLLGFREAGVKRAYLEVTAENEPAINLYRSIGFRLTRTLYK 261
            G  + +  DCGTIQ +     MG+IQNVG+ P+HRGLGLGRALV K L GF EA ++R +LEVTA+NEPA+ LYRSIGF+LTRTLYK
Sbjct:   93 GNNSHDTQDCGTIQGLAQQGRMGSIQNVGVAPQHRGLGLGRALVLKALRGFYEARMRRVFLEVTADNEPAVELYRSIGFKLTRTLYK 179          
BLAST of mRNA_M-pyrifera_M_contig78301.18411.1 vs. uniprot
Match: A0A3N5RPP9_9PLAN (GNAT family N-acetyltransferase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3N5RPP9_9PLAN)

HSP 1 Score: 119 bits (297), Expect = 8.550e-32
Identity = 58/89 (65.17%), Postives = 68/89 (76.40%), Query Frame = 1
Query:   25 DCGTIQAIVPSRIMGAIQNVGITPKHRGLGLGRALVTKCLLGFREAGVKRAYLEVTAENEPAINLYRSIGFRLTRTLYKPSHYVEAPSL 291
            DC TIQ +V + + GAIQNVG+ P+HRG GLGRALV +CL GFR+AG+ R YLEVTA N PA+ LYRSIGFRL RT YK    VE P+L
Sbjct:  100 DCATIQGVVQTGLWGAIQNVGVVPEHRGHGLGRALVLRCLQGFRQAGIPRVYLEVTACNAPAVRLYRSIGFRLARTTYKA---VEQPAL 185          
BLAST of mRNA_M-pyrifera_M_contig78301.18411.1 vs. uniprot
Match: A0A7W0RRE9_9PLAN (GNAT family N-acetyltransferase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7W0RRE9_9PLAN)

HSP 1 Score: 117 bits (292), Expect = 3.620e-31
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 1
Query:   25 DCGTIQAIVPSRIMGAIQNVGITPKHRGLGLGRALVTKCLLGFREAGVKRAYLEVTAENEPAINLYRSIGFRLTRTLYK 261
            DCGTIQ +  S  +GAIQNVGITP  RGLGLGRALV K L GFR AG++R YLEVTAEN PA+ LYRSIGFR+ RT+YK
Sbjct:   91 DCGTIQGLAASPQLGAIQNVGITPDARGLGLGRALVLKALHGFRAAGMRRVYLEVTAENAPAVELYRSIGFRVIRTMYK 169          
BLAST of mRNA_M-pyrifera_M_contig78301.18411.1 vs. uniprot
Match: A0A2D6SRJ0_9PLAN (N-acetyltransferase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SRJ0_9PLAN)

HSP 1 Score: 116 bits (290), Expect = 1.170e-30
Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = 1
Query:   22 VDCGTIQAIVPSRIMGAIQNVGITPKHRGLGLGRALVTKCLLGFREAGVKRAYLEVTAENEPAINLYRSIGFRLTRTLYK 261
            VDCGTIQ +  +R +GAIQNVG+ P+HRGLGLGRAL+ K L GFR   ++R YLEVTAEN PA+ LY+S GFRL RT+YK
Sbjct:  100 VDCGTIQGLAQNRTLGAIQNVGVVPEHRGLGLGRALLLKALAGFRSRRLRRVYLEVTAENAPAVRLYKSAGFRLIRTMYK 179          
BLAST of mRNA_M-pyrifera_M_contig78301.18411.1 vs. uniprot
Match: A0A518CRW3_9PLAN (Mycothiol acetyltransferase n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CRW3_9PLAN)

HSP 1 Score: 115 bits (289), Expect = 1.310e-30
Identity = 56/87 (64.37%), Postives = 66/87 (75.86%), Query Frame = 1
Query:   22 VDCGTIQAIVPSRIMGAIQNVGITPKHRGLGLGRALVTKCLLGFREAGVKRAYLEVTAENEPAINLYRSIGFRLTRTLYKPSHYVEA 282
            +DCGTIQ IV S  +GAIQNVG+ P+HRG GLGRALV K L GF+ AG++R YLEVTA+N  A+ LY SIGFR+ RTLYK    V A
Sbjct:  100 LDCGTIQGIVQSTNLGAIQNVGVIPEHRGQGLGRALVCKSLQGFQAAGIRRVYLEVTAQNSSAVELYHSIGFRILRTLYKAVETVTA 186          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78301.18411.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518A683_9PLAN1.370e-6296.91Ribosomal-protein-alanine N-acetyltransferase n=9 ... [more]
A0A517VXH4_9PLAN1.690e-5688.54Ribosomal-protein-alanine N-acetyltransferase n=3 ... [more]
A0A3D3QYA3_9PLAN3.880e-5589.69N-acetyltransferase n=9 Tax=Planctomycetaceae TaxI... [more]
A0A836RL64_9PLAN1.280e-3366.27N-acetyltransferase n=1 Tax=Planctomycetaceae bact... [more]
A0A2E7D339_9PLAN1.940e-3263.86N-acetyltransferase n=1 Tax=Planctomycetaceae bact... [more]
A0A517ZRH3_9PLAN8.330e-3264.37Putative acetyltransferase n=3 Tax=Symmachiella Ta... [more]
A0A3N5RPP9_9PLAN8.550e-3265.17GNAT family N-acetyltransferase n=1 Tax=Planctomyc... [more]
A0A7W0RRE9_9PLAN3.620e-3172.15GNAT family N-acetyltransferase n=1 Tax=Planctomyc... [more]
A0A2D6SRJ0_9PLAN1.170e-3066.25N-acetyltransferase n=1 Tax=Planctomycetaceae bact... [more]
A0A518CRW3_9PLAN1.310e-3064.37Mycothiol acetyltransferase n=1 Tax=Polystyrenella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78301contigM-pyrifera_M_contig78301:697..990 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score176.4
Seed ortholog evalue6.4e-42
Seed eggNOG ortholog344747.PM8797T_30576
KEGG rclassRC00004,RC00096
KEGG koko:K18566
KEGG ReactionR10745,R10746
KEGG Pathwayko00332,ko01130,map00332,map01130
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PFAM GCN5-related N-acetyltransferase
EggNOG OGs2IZQZ@203682,COG0454@1,COG0456@2
COG Functional cat.K
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size294
Cds size291
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816685.0678518-CDS-M-pyrifera_M_contig78301:696..9871622816685.0678518-CDS-M-pyrifera_M_contig78301:696..987Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78301 697..987 -
1692278118.601476-CDS-M-pyrifera_M_contig78301:696..9871692278118.601476-CDS-M-pyrifera_M_contig78301:696..987Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78301 697..987 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816685.0816882-UTR-M-pyrifera_M_contig78301:987..9901622816685.0816882-UTR-M-pyrifera_M_contig78301:987..990Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig78301 988..990 -
1692278118.612441-UTR-M-pyrifera_M_contig78301:987..9901692278118.612441-UTR-M-pyrifera_M_contig78301:987..990Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig78301 988..990 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78301.18411.1prot_M-pyrifera_M_contig78301.18411.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig78301 697..987 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig78301.18411.1

>prot_M-pyrifera_M_contig78301.18411.1 ID=prot_M-pyrifera_M_contig78301.18411.1|Name=mRNA_M-pyrifera_M_contig78301.18411.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp
MGNEEPVDCGTIQAIVPSRIMGAIQNVGITPKHRGLGLGRALVTKCLLGF
REAGVKRAYLEVTAENEPAINLYRSIGFRLTRTLYKPSHYVEAPSL*
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mRNA from alignment at M-pyrifera_M_contig78301:697..990-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig78301.18411.1 ID=mRNA_M-pyrifera_M_contig78301.18411.1|Name=mRNA_M-pyrifera_M_contig78301.18411.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=294bp|location=Sequence derived from alignment at M-pyrifera_M_contig78301:697..990- (Macrocystis pyrifera P11B4 male)
GGCATGGGCAATGAAGAACCCGTCGACTGTGGCACGATTCAGGCCATCGT CCCCAGCCGCATCATGGGTGCGATTCAGAACGTCGGCATCACCCCCAAAC ACCGCGGACTCGGACTGGGCAGGGCACTGGTCACCAAATGCCTCCTCGGT TTCCGCGAAGCCGGTGTCAAACGGGCTTACCTCGAAGTCACCGCCGAGAA TGAACCCGCCATCAACCTCTACCGGTCCATCGGCTTCCGCCTCACACGGA CCCTCTACAAACCCAGCCACTACGTCGAAGCTCCCTCGCTCTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig78301:697..990-

>mRNA_M-pyrifera_M_contig78301.18411.1 ID=mRNA_M-pyrifera_M_contig78301.18411.1|Name=mRNA_M-pyrifera_M_contig78301.18411.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig78301:697..990- (Macrocystis pyrifera P11B4 male)
ATGGGCAATGAAGAACCCGTCGACTGTGGCACGATTCAGGCCATCGTCCC
CAGCCGCATCATGGGTGCGATTCAGAACGTCGGCATCACCCCCAAACACC
GCGGACTCGGACTGGGCAGGGCACTGGTCACCAAATGCCTCCTCGGTTTC
CGCGAAGCCGGTGTCAAACGGGCTTACCTCGAAGTCACCGCCGAGAATGA
ACCCGCCATCAACCTCTACCGGTCCATCGGCTTCCGCCTCACACGGACCC
TCTACAAACCCAGCCACTACGTCGAAGCTCCCTCGCTCTAAATGGGCAAT
GAAGAACCCGTCGACTGTGGCACGATTCAGGCCATCGTCCCCAGCCGCAT
CATGGGTGCGATTCAGAACGTCGGCATCACCCCCAAACACCGCGGACTCG
GACTGGGCAGGGCACTGGTCACCAAATGCCTCCTCGGTTTCCGCGAAGCC
GGTGTCAAACGGGCTTACCTCGAAGTCACCGCCGAGAATGAACCCGCCAT
CAACCTCTACCGGTCCATCGGCTTCCGCCTCACACGGACCCTCTACAAAC
CCAGCCACTACGTCGAAGCTCCCTCGCTCTAA
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