mRNA_M-pyrifera_M_contig78296.18406.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78296.18406.1 vs. uniprot
Match: A0A2D9CJN7_9BACT (Uncharacterized protein n=4 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D9CJN7_9BACT) HSP 1 Score: 289 bits (740), Expect = 3.340e-85 Identity = 147/310 (47.42%), Postives = 206/310 (66.45%), Query Frame = 1 Query: 10 PPVAINGELAPRSLSFEMNDRAVSFAEVTGLVRFEGTQGTIEDVHASSVGPNSTDEADPYSIAIDGDWAI-EDEGFGVDLTIDAKGGVLDSPLRAVLPSVLDTVLNNLQLGSAGPMDIAGLQLSADRIGSEHMSFRVDGRADILGGYATIGMPITDLDGRIDFVAAGEQGRVGYEINLEADKLLAGPLRLREGRMNLVGDASRPGVVLIPEIEAAMHGGRIAGSAQIRPADNKRSRYWADIHCSGVRAAPMFDDFLLPAGGLEGPPIPGEENVRSAWDIDDEFSRGLMIADLSMSGIVGDPSNRAGRGRL 936 PPVA++G L P SL MN++ FA+V G V FEG G E + A VG S SIA+DG WA+ +G +DL +DA+G +L P+RA++P + V+ +LQ+ + G + I G+++ + +G+ + + G A I G A +G+PITDL G + F G Q +GYE+ L+A +L AG +R + M L+GDA+ PGVVLIPEI A MHGGRIAGSAQIRPA + YW ++H SG+RAAP+FDD LLP GGLEGPP+PG++ V SAW ++ SRG M+ADL+++G +G+PS R+GRG + Sbjct: 1036 PPVAVHGTLEPLSLQLTMNEQTADFAQVQGHVLFEGYTGRFEQIRA--VGDES-------SIALDGSWALLPRQGLNMDLRVDAQGDLLQGPVRAIIPEPVGRVIESLQIDAEGGVVIDGMRVVTEGLGTSSGLYELRGSARIEQGSAVLGLPITDLSGDLAFAVRGTQETLGYELRLQASRLRAGLMRAYDANMQLIGDANNPGVVLIPEIIAGMHGGRIAGSAQIRPAGDGVPHYWMELHASGIRAAPVFDDLLLPEGGLEGPPLPGQDAVLSAWSKAEDLSRGSMLADLTLTGPIGEPSMRSGRGTV 1336
BLAST of mRNA_M-pyrifera_M_contig78296.18406.1 vs. uniprot
Match: A0A2A4RIJ9_9BACT (Uncharacterized protein (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A2A4RIJ9_9BACT) HSP 1 Score: 280 bits (717), Expect = 2.940e-82 Identity = 136/311 (43.73%), Postives = 204/311 (65.59%), Query Frame = 1 Query: 1 IMIPPVAINGELAPRSLSFEMNDRAVSFAEVTGLVRFEGTQGTIEDVHASSVGPNSTDEADPYSIAIDGDWAIE-DEGFGVDLTIDAKGGVLDSPLRAVLPSVLDTVLNNLQLGSAGPMDIAGLQLSADRIGSEHMSFRVDGRADILGGYATIGMPITDLDGRIDFVAAGEQGRVGYEINLEADKLLAGPLRLREGRMNLVGDASRPGVVLIPEIEAAMHGGRIAGSAQIRPADNKRSRYWADIHCSGVRAAPMFDDFLLPAGGLEGPPIPGEENVRSAWDIDDEFSRGLMIADLSMSGIVGDPSNRAGRG 930 + + P ING L+P+S+S M D +F +V+G + FEG +G + + A + ST S+ IDG W++ ++G DL IDA G +L P+RA++P + +V++ L++ + GP+++ GL+++ +G ++ + + G A + G A IG+PIT + G + F G +GYEI L+A +L AG +R+ + ++ ++GDA PGVVLIPEI A MHGG+IAGSAQIRP + YW ++H SGVRAAP+F+D LLP GL GPP+PGE +V S W + D+ SRG MI DL+M+G +GDPS R+GRG Sbjct: 878 VKLVPTMINGSLSPKSISLMMGDERAAFDDVSGELLFEGFKGKVNQLRAVN---GST------SVGIDGAWSMNPNQGVEFDLNIDATGDLLTGPMRAIMPGAVGSVIDRLEIKAEGPVEVEGLRITGSGLGQDNAVYDIFGSASLKNGSAVIGLPITGIVGDLGFAVHGTNDTLGYEITLDAQRLRAGSMRVHDAQVTIIGDAHNPGVVLIPEIRAGMHGGQIAGSAQIRPDAVGEAHYWLELHASGVRAAPVFNDLLLPPEGLAGPPLPGETSVLSVWSLGDDLSRGAMIGDLTMTGPIGDPSRRSGRG 1179
BLAST of mRNA_M-pyrifera_M_contig78296.18406.1 vs. uniprot
Match: A0A812Y2S2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812Y2S2_9DINO) HSP 1 Score: 274 bits (701), Expect = 7.540e-80 Identity = 136/317 (42.90%), Postives = 205/317 (64.67%), Query Frame = 1 Query: 10 PPVAINGELAPRSLSFEMNDRAVSFAE--VTGLVRFEGTQGTIEDVHASSVGPNSTDEADPYSIAIDGDWAIED-EGFGVDLTIDAKGGVLDSPLRAVLPSVLDTVLNNLQLGSAGPMDIAGLQLSADRIGSEHMSFRVDGRADILGGYATIGMPITDLDGRIDFVA-------AGEQGRVGYEINLEADKLLAGPLRLREGRMNLVGDASRPGVVLIPEIEAAMHGGRIAGSAQIRPADNKRSRYWADIHCSGVRAAPMFDDFLLPAGGLEGPPIPGEENVRSAWDIDDEFSRGLMIADLSMSGIVGDPSNRAGRG 930 PPV I+G L PR+LS E N + F + ++G +RF+G G + ++A E D Y++++DG WA+ G VDL I A G VL P+R +LP L +V++ L++ S+ P+D+ L++ AD++G++ +++++G A +L G A +G+PIT+LDGR++F A E+ + Y+I+LEA ++ AG LR+ + ++ D PGVVL+PE+ A MHGG + G+AQ++P +N Y +I SGVRAAP+FDD LP GLEGPP PG VRSAW++D + SRG+M ADL+M+G +GDP R GRG Sbjct: 980 PPVEIDGSLTPRTLSMERNGDVLEFNQDQISGTIRFDGLDGYFDQINA---------ENDEYTLSVDGKWAVTPGSGASVDLDIAAVGDVLHGPVRVILPDTLSSVVDQLKIESSRPIDLQHLRIIADKLGTDSTTYQIEGTASVLDGSALVGVPITELDGRVNFRVETGIKSNADERSPIEYQIDLEASQMRAGLLRVHNAQTTILNDPFNPGVVLVPELRAGMHGGMVTGNAQVQPNENGEPYYATEIRTSGVRAAPIFDDIFLPVEGLEGPPSPGSSVVRSAWNVDSDVSRGIMHADLAMTGPLGDPDQRVGRG 1287
BLAST of mRNA_M-pyrifera_M_contig78296.18406.1 vs. uniprot
Match: A0A3M2CLY1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CLY1_9BACT) HSP 1 Score: 239 bits (611), Expect = 7.510e-68 Identity = 128/311 (41.16%), Postives = 185/311 (59.49%), Query Frame = 1 Query: 7 IPPVAINGELAPRSLSFEMNDRAVSFAEVTGLVRFEGTQGTIEDVHASSVGPNSTDEADPYSIAIDGDWAIED-EGFGVDLTIDAKGGVLDSPLRAVLPSVLDTVLNNLQLGSAGPMDIAGLQLSADRIGSEHMSFRVDGRADILGGYATIGMPITDLDGRIDFVAAGEQGRVGYEINLEADKLLAGPLRLREGRMNLVGDASRPGVVLIPEIEAAMHGGRIAGSAQIRPADNKRSRYWADIHCSGVRAAPMFDDFLLPAGGLEGPPIPGEENVRSAWDIDDEFSRGLMIADLSMSGIVGDPSNRAGRGRL 936 +P +A G L PRSL+ E++ VSF ++ I+ V A + G S+ DG W+ G G+D+++ G L RA+LP L VLN Q+ + GP+ GL+LSA IG++ RV G + A +G+P+T++ RI F A + Y ++L AD+L AG LR+ + ++ DA+RPGVVL+PE+ +HGGRIAG+ Q + SRYW D+H S +RAAP+FDD LLP GGL GPP+PGEE VRSAW + D+++RG++ AD+S+SG+VGDP+ G+G L Sbjct: 988 LPALAAEGLLQPRSLALELDAGRVSFEQIDXXXXXXXXXXXIDGVRALARG---------VSLEADGQWSYSPGSGVGIDVSLGIGGERLSEAFRALLPVALVDVLNRFQVSADGPVSTDGLRLSASGIGTDSPETRVSGVVVVDQARALVGLPLTEMTARIGFDAQVTRDGPTYAVDLTADRLRAGSLRVEHAQATIIADAARPGVVLVPELTGRVHGGRIAGALQSHIVGST-SRYWLDLHGSDIRAAPVFDDLLLPPGGLVGPPLPGEETVRSAWSVSDDYTRGVLDADISLSGVVGDPTKTTGQGVL 1288
BLAST of mRNA_M-pyrifera_M_contig78296.18406.1 vs. uniprot
Match: A0A7C3K985_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C3K985_9BACT) HSP 1 Score: 94.4 bits (233), Expect = 1.120e-17 Identity = 91/315 (28.89%), Postives = 139/315 (44.13%), Query Frame = 1 Query: 25 NGELAPRSLSFEMNDRAVSFAEVTGLVRFEGTQGTIEDVHASSVGPNSTDEADPYSIAIDGDWAI------EDEGFGVDLTIDAKGGVLDSPLRAVLPSVLDTVLNNLQLGSAGPMDIAGLQLSADRI--GSEHMSFRVDGRADILGGYATIGMPITDLDGRIDFVAAGEQGRVGYEINLE--ADKLLAGPLRLREGRMNLVGDASRPGVVLIPEIEAAMHGGRIAGSAQIRP-ADNKRSRYWADIHCSGVRAAPMFDDFLLPAGGLEGPPIPGEENVRSAWDIDDEFSRGLMIADLSMSGIVGDPSNRAGRGRL 936 +G + PRSL+ R V+ ++G + E G IE V A EA +S+ +DG W+ + G T+ A+G L L+A LP+ ++ L + + GP+ I G +L R G ++F R +L G+ ITD DG A G E+ +E A + + + +GR PGV +P+ A HGG + A + P A+ KR Y + S V A + + L+ +GG E P GE RG++ LS+SG++GDPS R GRG + Sbjct: 1019 SGWVEPRSLTIRRRGREVAVDRLSGRIHVEPGGGRIEGVRA---------EAATWSLDVDGAWSERAPLVGDAPGLKAKFTLQAQG--LSDELQAALPAGVEDALRGVSMKIEGPLAIEGGELGVARRDEGGTAVAFTGSMRFAVLAMEP--GVSITDADGTAFIAYARPAGATEPEVRVEFEASRFKLAGIAMTDGR-GTFESGKLPGVYALPQFTAQAHGGAFSARAAVGPVAEGKR--YEVEASMSRVDFASLLAE-LMTSGGQE-PVAAGE--------------RGVLDGALSLSGMIGDPSARRGRGLI 1301
BLAST of mRNA_M-pyrifera_M_contig78296.18406.1 vs. uniprot
Match: A0A5Q4EN03_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A5Q4EN03_9BACT) HSP 1 Score: 72.0 bits (175), Expect = 3.240e-10 Identity = 75/340 (22.06%), Postives = 132/340 (38.82%), Query Frame = 1 Query: 16 VAINGELAPRSLSFEMNDRAVSFAEVTGLVRFEGTQGTIEDVHASSVGPNSTDEADPYSIAIDGDWAIEDEGFGVDLTIDAKGGVLDSPLRAVLPSVLDTVLNNLQLGSAGPMDIA----GLQLSADRIGSEH----------MSFRVDGRADILGGYATIGMPITDLDG--RIDFVAAGEQGRVGYEINLEADKLLAGPLRLREGRMNLVGDASRPGVVLIPEIEAAMHGGRIAGSAQI-------------------RPADNKRSRYWADIHCSGVRAAPMFDDFLLPAGGLEGPPIPGEENVRSAWDIDDEFSRGLMIADLSMSGIVGDPSNRAGRG 930 ++ G ++P SLS + V ++ +E + EA + + DG W +++ G +++ + A G L LR++LP LN++ + + A GL+ +A+R E +SF D G T P+ D++G RI + +++ AD++L + + R +V + PG++ I A++GGRI SA + +D ++RY D V + G P ++ E S G + A+LS+SG+VGDP + GRG Sbjct: 933 LSFEGSMSPLSLSLANDAGRVDIPDIAXXXXXXXXXXXVEALVL---------EAPEWRWSADGWWRLDESGPMMEMQLGASGSALGDDLRSMLPEDARIALNSIAIAGGFELSDATLRYGLESTAERASQETDATPPAAPGALSFTGD--VQYTGASYTGAFPVADVNGHARISATRPDAESTTHVRVDVTADQVLLAGMVVNRARAEVVTGVT-PGLIEINNFNGALYGGRITASALVLSEAIAGGAARSESGEVSTTSSDEAKTRYEVDARAVSVDFGRLI--------ATRGQPTDVDQAT--------EESGGRLDAELSLSGVVGDPLSARGRG 1244 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78296.18406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78296.18406.1 >prot_M-pyrifera_M_contig78296.18406.1 ID=prot_M-pyrifera_M_contig78296.18406.1|Name=mRNA_M-pyrifera_M_contig78296.18406.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=311bp MIPPVAINGELAPRSLSFEMNDRAVSFAEVTGLVRFEGTQGTIEDVHASSback to top mRNA from alignment at M-pyrifera_M_contig78296:54..989+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78296.18406.1 ID=mRNA_M-pyrifera_M_contig78296.18406.1|Name=mRNA_M-pyrifera_M_contig78296.18406.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=936bp|location=Sequence derived from alignment at M-pyrifera_M_contig78296:54..989+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78296:54..989+ >mRNA_M-pyrifera_M_contig78296.18406.1 ID=mRNA_M-pyrifera_M_contig78296.18406.1|Name=mRNA_M-pyrifera_M_contig78296.18406.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1866bp|location=Sequence derived from alignment at M-pyrifera_M_contig78296:54..989+ (Macrocystis pyrifera P11B4 male)back to top |