mRNA_M-pyrifera_M_contig77793.18299.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig77793.18299.1
Unique NamemRNA_M-pyrifera_M_contig77793.18299.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig77793.18299.1 vs. uniprot
Match: A0A7X6ASA5_9ACTN (Acyltransferase family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6ASA5_9ACTN)

HSP 1 Score: 142 bits (358), Expect = 3.300e-37
Identity = 76/121 (62.81%), Postives = 97/121 (80.17%), Query Frame = 1
Query:    1 WPLAALAGLVAVVWVGESDAVVTRGFPALMAVAWVAVIAACVVPGPVAR-VLAHPALRWVGLRSYAIYLIHWPLIELTDWNGPLVIAVTLLAAEASFRLVEDPVRRAQVIRRPLVVLVGFS 360
            WPLAA+ G+ AV++V ESD VVTRG PAL+++ WV ++AAC+      R VL+   LRW+GLRSYAIYL+HWPLIELTDW+ P+VIAVTL  AE SFR+VEDP+RRA+ +RRPL+ LVG +
Sbjct:  230 WPLAAVIGVTAVLFVEESDPVVTRGLPALISLGWVVLVAACLGGDHSYRSVLSRGWLRWLGLRSYAIYLVHWPLIELTDWSAPIVIAVTLGLAELSFRVVEDPIRRARRLRRPLL-LVGIA 349          
BLAST of mRNA_M-pyrifera_M_contig77793.18299.1 vs. uniprot
Match: A0A3M2GNX8_ACTSX (Acyltransferase (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GNX8_ACTSX)

HSP 1 Score: 112 bits (281), Expect = 1.420e-26
Identity = 57/112 (50.89%), Postives = 72/112 (64.29%), Query Frame = 1
Query:    4 PLAALAGLVAVVWVGESDAVVTRGFPALMAVAWVAVIAACVVPGPVARVLAHPALRWVGLRSYAIYLIHWPLIELTDWNGPLVIAVTLLAAEASFRLVEDPVRRAQVIRRPL 339
            P   LA L   V   + DAVV RG    + V W  ++A  V  GP+ R L+ P LRW+G RSYA+YL+HWPLI LTDW+ P+V+ VT   AE S RL+EDPVR   ++RRPL
Sbjct:  118 PXXXLATLALFVTAAQDDAVVVRGLVPGVGVVWAVLVAGAVAGGPLTRALSWPPLRWLGRRSYAVYLVHWPLIVLTDWSAPVVVVVTGAVAELSGRLLEDPVRAGTLVRRPL 229          
BLAST of mRNA_M-pyrifera_M_contig77793.18299.1 vs. uniprot
Match: A0A7K1ZAZ4_9ACTN (Acyltransferase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZAZ4_9ACTN)

HSP 1 Score: 109 bits (272), Expect = 3.330e-25
Identity = 59/108 (54.63%), Postives = 74/108 (68.52%), Query Frame = 1
Query:   46 GESDAVVTRGFPALMAVAWVAVIAACVVPGPVARVLAHPALRWVGLRSYAIYLIHWPLIELTDWNGPLVIAVTLLAAEASFRLVEDPVRRAQVIRRPLVVLVGFSVVA 369
            G  D++V RG P LMA  WV ++ A V  G ++R++A   LRW+G RSYAIYL HWPLIELTDWN   V+  TL+AAE SFRLVE PVR      +  +VL+G +VVA
Sbjct:  271 GPQDSLVFRGGPQLMAFCWVVLVVAAVRDGILSRIMAVGVLRWLGTRSYAIYLFHWPLIELTDWNPVTVVVATLIAAEVSFRLVEMPVRLGS--GQQALVLLGAAVVA 376          
BLAST of mRNA_M-pyrifera_M_contig77793.18299.1 vs. uniprot
Match: A0A6N9EUF8_9ACTN (Acyltransferase family protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EUF8_9ACTN)

HSP 1 Score: 104 bits (259), Expect = 1.920e-23
Identity = 57/103 (55.34%), Postives = 72/103 (69.90%), Query Frame = 1
Query:    7 LAALAGLVAVVWVGESDAVVTRGFPALMAVAWVAVIAACVVPGPVARVLAHPALRWVGLRSYAIYLIHWPLIELTDWNGPLVIAVTLLAAEASFRLVEDPVRR 315
            +AA   +V+V+ +G  D  V RG P LMA+ WV ++ A V  G  AR ++   LRW+GLRSYAIYL HWP+IELTDW+  +VI VTL  AEASF L+E PVRR
Sbjct:  252 VAAALTVVSVLRLGPDDGFVFRGGPQLMALCWVVLVIAAVRDGWPARFMSWAPLRWLGLRSYAIYLFHWPVIELTDWHPVVVIVVTLGLAEASFHLLEMPVRR 354          
BLAST of mRNA_M-pyrifera_M_contig77793.18299.1 vs. uniprot
Match: A0A6B1EC35_9ACTN (Acyltransferase family protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EC35_9ACTN)

HSP 1 Score: 102 bits (253), Expect = 1.240e-22
Identity = 55/103 (53.40%), Postives = 73/103 (70.87%), Query Frame = 1
Query:    7 LAALAGLVAVVWVGESDAVVTRGFPALMAVAWVAVIAACVVPGPVARVLAHPALRWVGLRSYAIYLIHWPLIELTDWNGPLVIAVTLLAAEASFRLVEDPVRR 315
            +AA   +V+V+ +G  + +V RG P LMA+ WV ++ A V  G  AR ++   LRW+GLRSYAIYL HWP+IELT+W+  +VI VTL  AEASF L+E PVRR
Sbjct:  252 VAAALTVVSVLRLGPDEGLVFRGGPQLMALCWVVLVIAAVRDGWPARFMSWAPLRWLGLRSYAIYLFHWPVIELTEWHPVVVIVVTLGLAEASFHLLEMPVRR 354          
BLAST of mRNA_M-pyrifera_M_contig77793.18299.1 vs. uniprot
Match: UPI001D0F3A68 (acyltransferase n=2 Tax=unclassified Cellulomonas TaxID=2620175 RepID=UPI001D0F3A68)

HSP 1 Score: 77.4 bits (189), Expect = 5.110e-14
Identity = 57/114 (50.00%), Postives = 66/114 (57.89%), Query Frame = 1
Query:   10 AALAGLV-AVVWVGESDAVVTRG-FPALMAVAWVAVIAACVVPGPVARVLAHPALRWVGLRSYAIYLIHWPLIELT---------DWNGPLV-IAVTLLAAEASFRLVEDPVRR 315
            AAL G+V  V  V E   V+ RG F A   +  V V AA    G + RVLA   LRW+G RSY IYL HWP++ LT         DW  PLV + VTLL AEAS+R VE PVRR
Sbjct:  272 AALVGVVLCVALVDEFSGVLYRGGFLAFAGLTVVLVGAAADPAGLLGRVLARQPLRWLGERSYGIYLWHWPVLMLTRPDQDVTLPDWASPLVRVGVTLLLAEASYRWVETPVRR 385          
BLAST of mRNA_M-pyrifera_M_contig77793.18299.1 vs. uniprot
Match: D5UCG9_CELFN (Acyltransferase 3 n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / BCRC 11376 / JCM 18109 / NBRC 3775 / NCIMB 8073 / NRS 134) TaxID=446466 RepID=D5UCG9_CELFN)

HSP 1 Score: 77.0 bits (188), Expect = 6.970e-14
Identity = 55/115 (47.83%), Postives = 69/115 (60.00%), Query Frame = 1
Query:    7 LAALAGLVAVVWVGE--SDAVVTRGFPALMAVAWVAVIAACVVPGPVARVLAHPALRWVGLRSYAIYLIHWPLIELT---------DWNGPLVIA-VTLLAAEASFRLVEDPVRR 315
            +AALAG+VA V + +  S  +   GF A  A+A V V AA    G + R LA   LRW+G RSY IYL HWP+++L          +W  P+V A VTLL AEAS+R VE PVRR
Sbjct:  273 VAALAGVVACVLLVDPYSAGLYRGGFAAFAALAIVLVGAAADPAGLLGRALARQPLRWLGERSYGIYLWHWPVLQLMRPDQDVTLPEWASPVVRAGVTLLLAEASYRWVETPVRR 387          
BLAST of mRNA_M-pyrifera_M_contig77793.18299.1 vs. uniprot
Match: A0A1I3YNW9_9CELL (Peptidoglycan-N-acetylmuramate O-acetyltransferase n=4 Tax=unclassified Cellulomonas TaxID=2620175 RepID=A0A1I3YNW9_9CELL)

HSP 1 Score: 75.9 bits (185), Expect = 1.760e-13
Identity = 57/114 (50.00%), Postives = 68/114 (59.65%), Query Frame = 1
Query:   10 AALAGLVA-VVWVGESDAVVTRG-FPALMAVAWVAVIAACVVPGPVARVLAHPALRWVGLRSYAIYLIHWPLIELT---------DWNGPLV-IAVTLLAAEASFRLVEDPVRR 315
            AAL G+VA VV V E  A + RG F A  A+A V V AA    G + R L+   LRW+G RSY IYL HWP++ LT          W  P+V + VTLL AEAS+R VE PVRR
Sbjct:  271 AALVGVVACVVLVDEFSAGLYRGGFLAFSALAVVLVGAAADPAGLLGRALSRQPLRWLGERSYGIYLWHWPVLMLTRPDQDLTLPGWASPVVRVGVTLLLAEASYRWVETPVRR 384          
BLAST of mRNA_M-pyrifera_M_contig77793.18299.1 vs. uniprot
Match: C7NGK2_KYTSD (Predicted acyltransferase n=2 Tax=Kytococcus sedentarius TaxID=1276 RepID=C7NGK2_KYTSD)

HSP 1 Score: 74.7 bits (182), Expect = 4.540e-13
Identity = 50/120 (41.67%), Postives = 69/120 (57.50%), Query Frame = 1
Query:    1 WPLAALAGLVAVVWV-----GESDAVVTRGFPALMAVAWVAVIAACVVPGPVARVLAHPALRWVGLRSYAIYLIHWPLIELT------DWNGPLVIAV----TLLAAEASFRLVEDPVRR 315
            W +  LAGLV + W        S+ +   GF AL  +  V V+AA   PGPV  +L+   LR++G RSY++YL HWP+   T       W+ P+V+ V    TL AAE S+RLVE+PVR+
Sbjct:  262 WTVVGLAGLVGLGWYFVAMDETSEGLYRWGFAALALLVAVLVVAATR-PGPVESLLSLAPLRYLGTRSYSLYLWHWPIAAFTRPGIDVQWSEPVVMVVRWGLTLAAAELSYRLVENPVRK 380          
BLAST of mRNA_M-pyrifera_M_contig77793.18299.1 vs. uniprot
Match: UPI00198EF50D (Acetyltransferase n=1 Tax=Roseiflexaceae bacterium TaxID=2762507 RepID=UPI00198EF50D)

HSP 1 Score: 74.3 bits (181), Expect = 6.170e-13
Identity = 48/104 (46.15%), Postives = 61/104 (58.65%), Query Frame = 1
Query:   70 RGFPALMAVAWVAVIAACVVPG-PVARVLAHPALRWVGLRSYAIYLIHWPLIELTDWNG----------PLVIAVTLLAAEASFRLVEDPV---RRAQVIRRPL 339
            RG  AL+A+  V VIAA  +PG P AR+L  P LRW+GLRSY +YL HWP++ L   N           PL +  T   AE S+RLVE P+   RR Q +R P+
Sbjct:  264 RGGFALVALLTVCVIAAAQLPGSPAARLLDWPGLRWIGLRSYGLYLWHWPILVLLRTNPRVSIEPVLLLPLALLATFTMAELSYRLVELPLQRWRRVQDVRLPV 367          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77793.18299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X6ASA5_9ACTN3.300e-3762.81Acyltransferase family protein n=1 Tax=Actinomycet... [more]
A0A3M2GNX8_ACTSX1.420e-2650.89Acyltransferase (Fragment) n=1 Tax=Actinomyces sp.... [more]
A0A7K1ZAZ4_9ACTN3.330e-2554.63Acyltransferase n=2 Tax=Acidimicrobiaceae bacteriu... [more]
A0A6N9EUF8_9ACTN1.920e-2355.34Acyltransferase family protein n=1 Tax=Acidimicrob... [more]
A0A6B1EC35_9ACTN1.240e-2253.40Acyltransferase family protein n=1 Tax=Acidimicrob... [more]
UPI001D0F3A685.110e-1450.00acyltransferase n=2 Tax=unclassified Cellulomonas ... [more]
D5UCG9_CELFN6.970e-1447.83Acyltransferase 3 n=1 Tax=Cellulomonas flavigena (... [more]
A0A1I3YNW9_9CELL1.760e-1350.00Peptidoglycan-N-acetylmuramate O-acetyltransferase... [more]
C7NGK2_KYTSD4.540e-1341.67Predicted acyltransferase n=2 Tax=Kytococcus seden... [more]
UPI00198EF50D6.170e-1346.15Acetyltransferase n=1 Tax=Roseiflexaceae bacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77793contigM-pyrifera_M_contig77793:6..392 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score74.7
Seed ortholog evalue3.5e-11
Seed eggNOG ortholog446466.Cfla_1385
Preferred nameoatA
Hectar predicted targeting categorysignal peptide
GOsGO:0000271,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016020,GO:0016051,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1903509
EggNOG free text desc.Acyltransferase family
EggNOG OGs2GKI5@201174,4F10J@85016,COG1835@1,COG1835@2
COG Functional cat.I
Best tax levelCellulomonadaceae
Best eggNOG OGNA|NA|NA
Exons1
Model size387
Cds size387
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816679.041683-CDS-M-pyrifera_M_contig77793:5..3921622816679.041683-CDS-M-pyrifera_M_contig77793:5..392Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77793 6..392 +
1692278114.9702373-CDS-M-pyrifera_M_contig77793:5..3921692278114.9702373-CDS-M-pyrifera_M_contig77793:5..392Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77793 6..392 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77793.18299.1prot_M-pyrifera_M_contig77793.18299.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig77793 6..392 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig77793.18299.1

>prot_M-pyrifera_M_contig77793.18299.1 ID=prot_M-pyrifera_M_contig77793.18299.1|Name=mRNA_M-pyrifera_M_contig77793.18299.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp
WPLAALAGLVAVVWVGESDAVVTRGFPALMAVAWVAVIAACVVPGPVARV
LAHPALRWVGLRSYAIYLIHWPLIELTDWNGPLVIAVTLLAAEASFRLVE
DPVRRAQVIRRPLVVLVGFSVVAAVGLGV
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mRNA from alignment at M-pyrifera_M_contig77793:6..392+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77793.18299.1 ID=mRNA_M-pyrifera_M_contig77793.18299.1|Name=mRNA_M-pyrifera_M_contig77793.18299.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig77793:6..392+ (Macrocystis pyrifera P11B4 male)
TGGCCCTTGGCTGCGCTTGCCGGACTGGTGGCTGTCGTCTGGGTGGGCGA ATCGGATGCCGTCGTCACCCGCGGGTTCCCGGCCCTGATGGCGGTGGCTT GGGTCGCGGTGATCGCCGCGTGTGTGGTCCCCGGTCCCGTCGCCCGGGTG CTCGCACACCCGGCGCTGCGCTGGGTCGGACTCCGGTCCTACGCGATCTA TCTGATCCACTGGCCCCTGATCGAGCTGACCGACTGGAACGGGCCGCTCG TCATCGCGGTGACCCTGCTGGCGGCCGAGGCCTCCTTCCGCCTCGTCGAA GACCCGGTCCGCCGGGCCCAGGTGATCCGCCGTCCCTTGGTCGTGTTGGT CGGCTTCTCGGTCGTGGCCGCGGTGGGCCTCGGTGTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig77793:6..392+

>mRNA_M-pyrifera_M_contig77793.18299.1 ID=mRNA_M-pyrifera_M_contig77793.18299.1|Name=mRNA_M-pyrifera_M_contig77793.18299.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig77793:6..392+ (Macrocystis pyrifera P11B4 male)
TGGCCCTTGGCTGCGCTTGCCGGACTGGTGGCTGTCGTCTGGGTGGGCGA
ATCGGATGCCGTCGTCACCCGCGGGTTCCCGGCCCTGATGGCGGTGGCTT
GGGTCGCGGTGATCGCCGCGTGTGTGGTCCCCGGTCCCGTCGCCCGGGTG
CTCGCACACCCGGCGCTGCGCTGGGTCGGACTCCGGTCCTACGCGATCTA
TCTGATCCACTGGCCCCTGATCGAGCTGACCGACTGGAACGGGCCGCTCG
TCATCGCGGTGACCCTGCTGGCGGCCGAGGCCTCCTTCCGCCTCGTCGAA
GACCCGGTCCGCCGGGCCCAGGTGATCCGCCGTCCCTTGGTCGTGTTGGT
CGGCTTCTCGGTCGTGGCCGCGGTGGGCCTCGGTGTCTGGCCCTTGGCTG
CGCTTGCCGGACTGGTGGCTGTCGTCTGGGTGGGCGAATCGGATGCCGTC
GTCACCCGCGGGTTCCCGGCCCTGATGGCGGTGGCTTGGGTCGCGGTGAT
CGCCGCGTGTGTGGTCCCCGGTCCCGTCGCCCGGGTGCTCGCACACCCGG
CGCTGCGCTGGGTCGGACTCCGGTCCTACGCGATCTATCTGATCCACTGG
CCCCTGATCGAGCTGACCGACTGGAACGGGCCGCTCGTCATCGCGGTGAC
CCTGCTGGCGGCCGAGGCCTCCTTCCGCCTCGTCGAAGACCCGGTCCGCC
GGGCCCAGGTGATCCGCCGTCCCTTGGTCGTGTTGGTCGGCTTCTCGGTC
GTGGCCGCGGTGGGCCTCGGTGTC
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