mRNA_M-pyrifera_M_contig77696.18278.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig77696.18278.1
Unique NamemRNA_M-pyrifera_M_contig77696.18278.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig77696.18278.1 vs. uniprot
Match: A0A7Y2IDP5_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IDP5_9ACTN)

HSP 1 Score: 224 bits (571), Expect = 3.000e-68
Identity = 127/250 (50.80%), Postives = 151/250 (60.40%), Query Frame = 1
Query:    4 RARAGLGNPLDRRAGTDRLVPVFHPWETGCDDSPRWDAWTEGSGLIGRWKERKGELVAALVVDDQ-GFALDSTEFRVESCGFNALVAWNIAELDRVGEAGTDLATGAAELRGVIADRWSAEDRTWVD-DSPSGGVRTADAMLCLLVDPRAEAIEELASPDAFAAPFGIRGVHAGEPTYDPDTYWRGPSWPQLDYLLVLALIAAEATDEASALGSASVRGAITSDWAEYWNADDGTGGGAMPQTWTALALV 747
            RA +G+ + L  R     LV V HPWETGCDDS RWD W  G     +W+  K +LVAAL  +   G+ + S+ F+V S GFNAL+AWN  EL  VG AG      A EL   IADRW    RTW D DS SG VRT D +L LLVDPR EA ++L  P  + A FG  GVH  EP+YDP+ YWRGPSWPQL YLL +A   A   D A  L ++    A  + +AEYW+ D G  GGA PQTWT LA V
Sbjct:  131 RAISGIAHLLIDRPKIAGLVCVLHPWETGCDDSARWDDWCPGGFEPEQWRRTKADLVAALHFEPSVGYPIGSSAFQVPSVGFNALLAWNSFELLSVG-AGEPHRARADELVAAIADRWDQSLRTWTDADSGSGVVRTLDGLLPLLVDPRDEAFDDLLDPATYGAAFGPCGVHRDEPSYDPEQYWRGPSWPQLTYLLAVAGRRAGRHDVADTLMASLRSAARNNGFAEYWHPDTGAPGGANPQTWTTLAAV 379          
BLAST of mRNA_M-pyrifera_M_contig77696.18278.1 vs. uniprot
Match: A0A6L6ERN0_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6L6ERN0_9ACTN)

HSP 1 Score: 221 bits (563), Expect = 6.610e-67
Identity = 119/258 (46.12%), Postives = 157/258 (60.85%), Query Frame = 1
Query:    7 ARAGLGNPLDRRAGTDRLVPVFHPWETGCDDSPRWDAWTEGSGLIGRWKERKGELVAALVVDDQGFALDSTEFRVESCGFNALVAWNIAELDRVGEAGTDLATGAAELRGVIADRWSAEDRTWVD----DSPSGGVRTADAMLCLLVDPRAEAIE----ELASPDAFAAPFGIRGVHAGEPTYDPDTYWRGPSWPQLDYLLVLALIAAEATDEASALGSASVRGAITSDWAEYWNADDGTGGGAMPQTWTALALVVDA 756
            A  GL    D R+  D L+ + HPWE+G DD PRWD W +G   I RW++RK ELVA+++ D  G  + +++FRV SCGFNALVA+N  EL  V     DL   A  L   +  RW     +W+D     + SG VR+ DA+L  LV   ++ ++    +L  P AF    G  GVH GEP++   TYWRGP+WPQL YLL +A      + +A+ALG+A V GA  S+WAEYW+A DGTG GA PQ+WTA+A VV A
Sbjct:  132 ATRGLRFLFDVRSRVDGLIALCHPWESGADDCPRWDHWCDGDWSIDRWRQRKSELVASVITDGFGSPIANSDFRVASCGFNALVAFNALELAAV-SGDQDLIESARTLISTLDSRWDNALCSWIDVGDASADSGRVRSLDALLPALVIDDSDRLDAVFAQLLDPSAFGGDCGPSGVHRGEPSFVAQTYWRGPAWPQLSYLLWIAARRHGRSADAAALGAALVAGAQRSNWAEYWDASDGTGLGAAPQSWTAIAAVVPA 388          
BLAST of mRNA_M-pyrifera_M_contig77696.18278.1 vs. uniprot
Match: A0A7K1Z658_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z658_9ACTN)

HSP 1 Score: 220 bits (560), Expect = 1.110e-66
Identity = 129/264 (48.86%), Postives = 161/264 (60.98%), Query Frame = 1
Query:    7 ARAGLGNPLDRRAGTDR--LVPVFHPWETGCDDSPRWD--AWTEGSGLIGRWKERKGELVAALVVDDQGFALDSTEFRVESCGFNALVAWNIAELDRVGEAGTDLATGAAELRGVIADRWSAEDRTWVDDSP----SGGVRTADAMLCLLVDPRAEA-----IEELASPDAFAAPFGIRGVHAGEPTYDPDTYWRGPSWPQLDYLLVLAL--IAAEATDEASALGSASVRGAITSDWAEYWNADDGTGGGAMPQTWTALALVVD 753
            A  GL    DRR       L+ V HPWETGCDDSPRWD  A  E   L  RW+E K +L+A +     G  L + +  V  CGFNALVA+N AEL  V  A  DL  GA EL   +  R+  + RTW D       SG +RTA+ +L LLV  R+E      +EELA PDA+ A +G RGVHA EPTYDP  YWRGP WPQL YLL LA+  ++ E +  A  +G++++RGA+ S  AEYW+ D GTG GA+PQ+WT LAL+ D
Sbjct:  111 AARGLRFFFDRRVRDPESGLIEVVHPWETGCDDSPRWDDLAGPEPFDLK-RWRELKNQLLARIERGSAGEPLANPDCAVAPCGFNALVAFNAAELATV-TADRDLELGAVELAAALDQRFDVQSRTWADAGALRRGSGSIRTAEGLLPLLVS-RSEVARQCVLEELADPDAYCARYGPRGVHAEEPTYDPTAYWRGPVWPQLSYLLWLAVSRVSPEESSVAELVGTSTIRGAVASGLAEYWDGDSGTGLGAIPQSWTGLALLFD 371          
BLAST of mRNA_M-pyrifera_M_contig77696.18278.1 vs. uniprot
Match: A0A6J7JVT2_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J7JVT2_9ZZZZ)

HSP 1 Score: 211 bits (538), Expect = 4.600e-65
Identity = 115/238 (48.32%), Postives = 150/238 (63.03%), Query Frame = 1
Query:   67 VFHPWETGCDDSPRWDAWTEGSGLIGRWKERKGELVAALVVDDQGFALDSTEFRVESCGFNALVAWNIAELDRVGEAGTDLATGAAELRGVIADRWSAEDRTWVD----DSPSGGVRTADAMLCLLV--DP-RAEAI-EELASPDAFAAPFGIRGVHAGEPTYDPDTYWRGPSWPQLDYLLVLALIAAEATDEASALGSASVRGAITSDWAEYWNADDGTGGGAMPQTWTALALVVDA 756
            + HPWE+G DD PRWD W +G   I RW++RK ELVA+++ D  G  + +++FRV SCGFNALVA+N  EL  V     DL   A  L   +  RW     +W+D     + SG VR+ DA+L  LV  DP R +A+  +L  P AF    G  GVH GEP++   TYWRGP+WPQL YLL +A      + +A+ALG+A V GA  S+WAEYW+A DGTG GA PQ+WTA+A +V A
Sbjct:    1 MCHPWESGADDCPRWDHWCDGDWSIDRWRQRKSELVASVITDGFGSPIANSDFRVASCGFNALVAFNALELAAV-SGDQDLIESARTLISTLDSRWDNALCSWIDVGDASADSGRVRSLDALLPALVIDDPDRLDAVFAQLLDPSAFGGDCGPSGVHRGEPSFVAQTYWRGPAWPQLSYLLWIAARRHGRSADAAALGAALVAGAQRSNWAEYWDASDGTGLGAAPQSWTAIAAMVPA 237          
BLAST of mRNA_M-pyrifera_M_contig77696.18278.1 vs. uniprot
Match: A0A6I3F8B9_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3F8B9_9ACTN)

HSP 1 Score: 211 bits (538), Expect = 3.570e-63
Identity = 121/257 (47.08%), Postives = 146/257 (56.81%), Query Frame = 1
Query:    7 ARAGLGNPLDRRAGTDRLVPVFHPWETGCDDSPRWDAWTEGSGLIGRWKERKGELVAALVVDDQGFALDSTEFRVESCGFNALVAWNIAELDRVGEAGTD-LATGAAELRGVIADRWSAEDRTWVD--DSP--SGGVRTADAMLCLLVDPRAEAIE----ELASPDAFAAPFGIRGVHAGEPTYDPDTYWRGPSWPQLDYLLVLALIAAEATDEASALGSASVRGAITSDWAEYWNADDGTGGGAMPQTWTALALVV 750
            A  GL   LD RA  D LV + HPWE+G DD PRWD W  G    GRW + KGELV  +     G  + +  F+V SCGFNALVA+N  EL   G  G D L   A  L   +A RW A   TWVD  DS   SG +RT DA+L +LVD    A++    ++  P AF    G  GVH  EP+Y+  TYWRGP+WPQL YL+ +A            L +  + GA TS WAEYW+ADDGTG GA PQ+W  LA VV
Sbjct:  131 ATRGLNFLLDERARIDGLVALCHPWESGGDDCPRWDHWCPGGWEAGRWYDIKGELVGTVEQAADGSPISNPSFQVASCGFNALVAFNAREL--AGVTGDDELRRKADALATTLATRWDASLATWVDAGDSAATSGRIRTLDALLPVLVDSNRPALDAAFAQMLDPAAFGGACGPTGVHRAEPSYEQRTYWRGPAWPQLTYLMWVAACRQNRPKAQEKLATMLIGGATTSHWAEYWDADDGTGLGAAPQSWATLAAVV 385          
BLAST of mRNA_M-pyrifera_M_contig77696.18278.1 vs. uniprot
Match: A0A2E8LGC4_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LGC4_9ACTN)

HSP 1 Score: 207 bits (526), Expect = 2.280e-61
Identity = 127/263 (48.29%), Postives = 153/263 (58.17%), Query Frame = 1
Query:    1 ARARAGLGNPLDRRAGTDR----LVPVFHPWETGCDDSPRWDAWTEGSGLIGRWKERKGELVAALVVDDQGFALDSTEFRVESCGFNALVAWNIAELDRV-GEAGTDLATGAAELRGVIADRWSAEDRTWVDDSP----SGGVRTADAMLCLLV--DPR--AEAIEELASPDAFAAPFGIRGVHAGEPTYDPDTYWRGPSWPQLDYLLVLALIAAEATDEASALGSASVRGAITSDWAEYWNADDGTGGGAMPQTWTALALVV 750
            A A AGL   L+RR   DR    LV + HPWE+G DDSPRWD    G   + RW+  K  LV  +   + G  L +  F V S GFNALVA+N  EL  V G+ G  LA  A EL G + +RW  +  TWVD  P    SG  RT DA+L LLV  DP   A  + +LA P A   PFG  GVH  EP +DP  YWRGP WPQL YLLVL     +A   A+ L +A+V GA  SD AEYW+ D G  GGA+PQ+WT LAL++
Sbjct:  133 AAAAAGLRFLLERR---DRDGSGLVLLCHPWESGADDSPRWDDCCPGGFAVDRWRAEKNRLVTTIEAGEDGSPLSNPAFPVASTGFNALVAFNARELAAVTGDDG--LAAAAGELAGSLDERWDDDLGTWVDAGPTAGGSGRCRTVDALLPLLVTDDPARAARVLADLADPAAHGGPFGPTGVHRAEPVFDPAAYWRGPVWPQLAYLLVLGARRFDAA-AAAQLAAATVAGAWASDLAEYWHPDTGEAGGAVPQSWTGLALLL 389          
BLAST of mRNA_M-pyrifera_M_contig77696.18278.1 vs. uniprot
Match: A0A2E5NPT3_9ACTN (Uncharacterized protein n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5NPT3_9ACTN)

HSP 1 Score: 203 bits (516), Expect = 7.700e-60
Identity = 122/259 (47.10%), Postives = 148/259 (57.14%), Query Frame = 1
Query:    1 ARARAGLGNPLDRRAGTDRLVPVFHPWETGCDDSPRWDAWTEGSGLIGRWKERKGELVAALVVDDQGFALDSTEFRVESCGFNALVAWNIAELDRVGEAGTD-LATGAAELRGVIADRWSAEDRTWVDD----SPSGGVRTADAMLCLLVDPR----AEAIEELASPDAFAAPFGIRGVHAGEPTYDPDTYWRGPSWPQLDYLLVLALIAAEATDEASALGSASVRGAITSDWAEYWNADDGTGGGAMPQTWTALALVV 750
            A A AGL   LD R     LV V HPWETG DDSPRWD    G     RW+  K  LV+       G AL +  F V   GFNALVA+N  EL   G  G D LA  A  L G +ADRW     TWVD+    S S   RT + +L LLV+      A+ +++L  P A  APFG  GVH  EP++DP  YWRGP WPQ+ YLLVLA +A  +   A+ L  A+V GA +S  AEYW+ D G G GA+PQ+W+ LALV+
Sbjct:  132 AAATAGLRFLLDHRRNPSGLVRVCHPWETGADDSPRWDDHCPGDFDRDRWRITKDRLVSLFETGPDGEALTNPAFDVAPVGFNALVAFNAREL--AGITGDDRLADDAKVLAGALADRWDPVLGTWVDECSDTSGSSSSRTTEGLLPLLVETAPGRAAKVVDQLLDPTAHGAPFGPTGVHRAEPSFDPRAYWRGPVWPQIAYLLVLA-VAPHSPTAAATLARATVAGAWSSSLAEYWDPDTGEGLGALPQSWSGLALVL 387          
BLAST of mRNA_M-pyrifera_M_contig77696.18278.1 vs. uniprot
Match: A0A7C7WDT3_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7C7WDT3_9ACTN)

HSP 1 Score: 202 bits (513), Expect = 1.070e-59
Identity = 127/261 (48.66%), Postives = 152/261 (58.24%), Query Frame = 1
Query:    7 ARAGLGNPLDRRAGTDR--LVPVFHPWETGCDDSPRWDAWTEGSGLIGRWKERKGELVAALVVDDQGFALDSTEFRVESCGFNALVAWNIAELDRVGEAGTD-LATGAAELRGVIADRWSAEDRTWVDDSP----SGGVRTADAMLCLLVDP----RAEAIEELASPDAFAAPFGIRGVHAGEPTYDPDTYWRGPSWPQLDYLLVLALIAAEATDEASALGSASVRGAITSDWAEYWNADDGTGGGAMPQTWTALALVVDA 756
            A AGL   LD+RA  DR  L+ V HPWETGCDDSPRWD    G     RW   K  LV+ + V   G  + + +F V   GFNALVA+N  EL  V   G + LA GA EL   +  RWS E  TWVD  P    SG VRT D++L LLVD      A  + +L  P A   P G  GVH GEP++ PD YWRGP WPQL YL+VLA     + + A+ L   +V GA  S  AEYWN D GTG GA+PQ+WT LAL++ A
Sbjct:  106 AVAGLRFLLDQRA-RDRSGLLLVCHPWETGCDDSPRWDDACPGGYDRKRWAVVKDHLVSTIQVGPDGSPVANPDFPVAPVGFNALVAFNAGELAAV--VGDERLAAGATELAEALTGRWSDEIGTWVDAGPMAGGSGRVRTLDSLLPLLVDDDPGRAAIVLGQLTDPAAHGGPAGPTGVHRGEPSFHPDAYWRGPVWPQLAYLMVLAADP-HSPEVAADLSRTTVAGAWASGLAEYWNPDTGTGLGAVPQSWTGLALLLAA 362          
BLAST of mRNA_M-pyrifera_M_contig77696.18278.1 vs. uniprot
Match: A0A2E8N7M4_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8N7M4_9ACTN)

HSP 1 Score: 201 bits (511), Expect = 5.130e-59
Identity = 123/261 (47.13%), Postives = 144/261 (55.17%), Query Frame = 1
Query:    7 ARAGLGNPLDRRAGTDRLVPVFHPWETGCDDSPRWDAWTEGSGLIGRWKERKGELVAALVVDDQGFALDSTEFRVESCGFNALVAWNIAELDRVGEAGTD-LATGAAELRGVIADRWSAEDRTWVDDSP----SGGVRTADAMLCLLVDPR----AEAIEELASPDAFAAPFGIRGVHAGEPTYDPDTYWRGPSWPQLDYLLVLALIAAEATDEASALGSASVRGAITSDWAEYWNADDGTGGGAMPQTWTALALVVDALG 762
            A AGL   LDRR     LV V HPWETG DDSPRWD    G     RW+  K  L + +     G AL +  F V   GFNALVA+N  EL   G  G D LA  A +L   +AD+W     TWVD  P    SG VRTADA+L LLVD         +++L  P     PFG  GVH  EP +D   YWRGP WPQL YLLVLA +   +   A+ L   +V GA  S  AEYW+ D G G GA+PQ+WT LALV+  LG
Sbjct:  136 ATAGLRFLLDRRHHPSGLVRVCHPWETGVDDSPRWDDHCPGGFDRDRWRVTKDRLASMMETGPDGEALANPGFDVAPAGFNALVAFNAREL--AGVTGDDRLADXAXQLADRLADQWDPALGTWVDAGPTSDGSGRVRTADALLGLLVDDHPGRATRVVDQLMDPTGHGGPFGPTGVHRAEPAFDARAYWRGPVWPQLAYLLVLA-VEPYSRSAAATLARTTVAGAWASGLAEYWDPDTGDGLGAIPQSWTGLALVLAGLG 393          
BLAST of mRNA_M-pyrifera_M_contig77696.18278.1 vs. uniprot
Match: UPI001E2CCB63 (hypothetical protein n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E2CCB63)

HSP 1 Score: 201 bits (510), Expect = 5.750e-59
Identity = 120/258 (46.51%), Postives = 146/258 (56.59%), Query Frame = 1
Query:    1 ARARAGLGNPLDRRAGTDRLVPVFHPWETGCDDSPRWDAWTEGSGLIGRWKERKGELVAALVVDDQGFALDSTEFRVESCGFNALVAWNIAELDRVGEAGTD-LATGAAELRGVIADRWSAEDRTWVDD----SPSGGVRTADAMLCLLVDPRAEAIE----ELASPDAFAAPFGIRGVHAGEPTYDPDTYWRGPSWPQLDYLLVLALIAAEATDEASALGSASVRGAITSDWAEYWNADDGTGGGAMPQTWTALALV 747
            A AR GLG  LD R   D LV + HPWE+G DDSPRWD W  G     RW + KGELVA++     G  L +  F V   GFNAL+A+N  EL  V   G D L   A  L   +  RW     TWVD     + SG VRT +A+LC+LV  RA+A +    ++  P A   P G   VH  EP+Y P TYWRGP+WPQL YL   A        +A+AL S  V GA  S  AEYW+ADDGTG GA+PQ+W  LA++
Sbjct:  135 APARRGLGFLLDHRRRIDGLVAMCHPWESGGDDSPRWDHWCPGGWDPRRWYDVKGELVASVESAPDGSPLSNPGFDVAPAGFNALIAFNALELAEV--TGDDQLGAQAEALADALDRRWEPALGTWVDAGESATSSGRVRTLEALLCVLVSRRADARDAAFAQMLDPGAHGGPCGPTQVHRDEPSYRPRTYWRGPAWPQLTYLCWAAARRHGREADATALASMLVAGATRSGLAEYWDADDGTGLGAVPQSWATLAVL 390          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77696.18278.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2IDP5_9ACTN3.000e-6850.80Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]
A0A6L6ERN0_9ACTN6.610e-6746.12Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A7K1Z658_9ACTN1.110e-6648.86Uncharacterized protein n=2 Tax=Acidimicrobiaceae ... [more]
A0A6J7JVT2_9ZZZZ4.600e-6548.32Unannotated protein n=1 Tax=freshwater metagenome ... [more]
A0A6I3F8B9_9ACTN3.570e-6347.08Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A2E8LGC4_9ACTN2.280e-6148.29Uncharacterized protein n=2 Tax=Acidimicrobiaceae ... [more]
A0A2E5NPT3_9ACTN7.700e-6047.10Uncharacterized protein n=5 Tax=Acidimicrobiaceae ... [more]
A0A7C7WDT3_9ACTN1.070e-5948.66Uncharacterized protein n=1 Tax=Acidimicrobiia bac... [more]
A0A2E8N7M4_9ACTN5.130e-5947.13Uncharacterized protein n=2 Tax=Acidimicrobiaceae ... [more]
UPI001E2CCB635.750e-5946.51hypothetical protein n=1 Tax=Rhabdothermincola sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77696contigM-pyrifera_M_contig77696:5..766 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score160.2
Seed ortholog evalue1.2e-36
Seed eggNOG ortholog298654.FraEuI1c_2662
Preferred nameygjK
KEGG koko:K03931
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004553,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0015926,GO:0016787,GO:0016798,GO:0033554,GO:0050896,GO:0051716
EggNOG free text desc.Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
EggNOG OGs2IFA4@201174,4ES28@85013,COG1626@1,COG1626@2
COG Functional cat.G
CAZyGH63
Best tax levelFrankiales
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size762
Cds size762
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816677.903526-CDS-M-pyrifera_M_contig77696:4..7661622816677.903526-CDS-M-pyrifera_M_contig77696:4..766Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77696 5..766 +
1692278114.2935114-CDS-M-pyrifera_M_contig77696:4..7661692278114.2935114-CDS-M-pyrifera_M_contig77696:4..766Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77696 5..766 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77696.18278.1prot_M-pyrifera_M_contig77696.18278.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig77696 5..766 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig77696.18278.1

>prot_M-pyrifera_M_contig77696.18278.1 ID=prot_M-pyrifera_M_contig77696.18278.1|Name=mRNA_M-pyrifera_M_contig77696.18278.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp
ARARAGLGNPLDRRAGTDRLVPVFHPWETGCDDSPRWDAWTEGSGLIGRW
KERKGELVAALVVDDQGFALDSTEFRVESCGFNALVAWNIAELDRVGEAG
TDLATGAAELRGVIADRWSAEDRTWVDDSPSGGVRTADAMLCLLVDPRAE
AIEELASPDAFAAPFGIRGVHAGEPTYDPDTYWRGPSWPQLDYLLVLALI
AAEATDEASALGSASVRGAITSDWAEYWNADDGTGGGAMPQTWTALALVV
DALG
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mRNA from alignment at M-pyrifera_M_contig77696:5..766+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77696.18278.1 ID=mRNA_M-pyrifera_M_contig77696.18278.1|Name=mRNA_M-pyrifera_M_contig77696.18278.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig77696:5..766+ (Macrocystis pyrifera P11B4 male)
GCGCGGGCCCGCGCGGGGCTGGGAAACCCCCTCGACCGACGAGCCGGCAC CGATCGGCTCGTGCCGGTGTTCCATCCGTGGGAGACCGGCTGCGACGACT CACCTCGGTGGGACGCCTGGACCGAGGGCAGCGGCCTCATCGGTCGTTGG AAGGAGCGCAAGGGCGAACTGGTCGCGGCCCTCGTCGTCGACGATCAGGG TTTCGCCCTCGACTCGACCGAGTTCCGAGTCGAATCGTGCGGCTTCAACG CGCTGGTCGCCTGGAACATCGCCGAACTCGATCGTGTCGGCGAGGCAGGA ACAGATCTCGCCACCGGCGCAGCGGAACTTCGTGGCGTCATCGCCGACCG GTGGAGCGCCGAGGACCGGACCTGGGTCGACGACTCACCCAGCGGCGGAG TCCGGACCGCCGACGCCATGCTCTGTCTGTTGGTCGATCCGAGGGCCGAG GCCATCGAGGAGCTGGCGTCGCCCGACGCGTTCGCTGCGCCCTTCGGCAT CCGGGGCGTGCACGCCGGCGAACCGACCTACGACCCCGACACGTACTGGC GAGGCCCGTCATGGCCCCAGCTCGACTACCTGCTGGTGCTGGCGTTGATC GCCGCCGAGGCGACCGACGAGGCGAGTGCGCTCGGGTCGGCGAGCGTCAG GGGAGCGATCACCTCGGACTGGGCCGAATACTGGAATGCCGACGACGGAA CCGGTGGGGGAGCGATGCCCCAGACCTGGACGGCGCTGGCGCTAGTTGTC GATGCGCTCGGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig77696:5..766+

>mRNA_M-pyrifera_M_contig77696.18278.1 ID=mRNA_M-pyrifera_M_contig77696.18278.1|Name=mRNA_M-pyrifera_M_contig77696.18278.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1524bp|location=Sequence derived from alignment at M-pyrifera_M_contig77696:5..766+ (Macrocystis pyrifera P11B4 male)
GCGCGGGCCCGCGCGGGGCTGGGAAACCCCCTCGACCGACGAGCCGGCAC
CGATCGGCTCGTGCCGGTGTTCCATCCGTGGGAGACCGGCTGCGACGACT
CACCTCGGTGGGACGCCTGGACCGAGGGCAGCGGCCTCATCGGTCGTTGG
AAGGAGCGCAAGGGCGAACTGGTCGCGGCCCTCGTCGTCGACGATCAGGG
TTTCGCCCTCGACTCGACCGAGTTCCGAGTCGAATCGTGCGGCTTCAACG
CGCTGGTCGCCTGGAACATCGCCGAACTCGATCGTGTCGGCGAGGCAGGA
ACAGATCTCGCCACCGGCGCAGCGGAACTTCGTGGCGTCATCGCCGACCG
GTGGAGCGCCGAGGACCGGACCTGGGTCGACGACTCACCCAGCGGCGGAG
TCCGGACCGCCGACGCCATGCTCTGTCTGTTGGTCGATCCGAGGGCCGAG
GCCATCGAGGAGCTGGCGTCGCCCGACGCGTTCGCTGCGCCCTTCGGCAT
CCGGGGCGTGCACGCCGGCGAACCGACCTACGACCCCGACACGTACTGGC
GAGGCCCGTCATGGCCCCAGCTCGACTACCTGCTGGTGCTGGCGTTGATC
GCCGCCGAGGCGACCGACGAGGCGAGTGCGCTCGGGTCGGCGAGCGTCAG
GGGAGCGATCACCTCGGACTGGGCCGAATACTGGAATGCCGACGACGGAA
CCGGTGGGGGAGCGATGCCCCAGACCTGGACGGCGCTGGCGCTAGTTGTC
GATGCGCTCGGGGCGCGGGCCCGCGCGGGGCTGGGAAACCCCCTCGACCG
ACGAGCCGGCACCGATCGGCTCGTGCCGGTGTTCCATCCGTGGGAGACCG
GCTGCGACGACTCACCTCGGTGGGACGCCTGGACCGAGGGCAGCGGCCTC
ATCGGTCGTTGGAAGGAGCGCAAGGGCGAACTGGTCGCGGCCCTCGTCGT
CGACGATCAGGGTTTCGCCCTCGACTCGACCGAGTTCCGAGTCGAATCGT
GCGGCTTCAACGCGCTGGTCGCCTGGAACATCGCCGAACTCGATCGTGTC
GGCGAGGCAGGAACAGATCTCGCCACCGGCGCAGCGGAACTTCGTGGCGT
CATCGCCGACCGGTGGAGCGCCGAGGACCGGACCTGGGTCGACGACTCAC
CCAGCGGCGGAGTCCGGACCGCCGACGCCATGCTCTGTCTGTTGGTCGAT
CCGAGGGCCGAGGCCATCGAGGAGCTGGCGTCGCCCGACGCGTTCGCTGC
GCCCTTCGGCATCCGGGGCGTGCACGCCGGCGAACCGACCTACGACCCCG
ACACGTACTGGCGAGGCCCGTCATGGCCCCAGCTCGACTACCTGCTGGTG
CTGGCGTTGATCGCCGCCGAGGCGACCGACGAGGCGAGTGCGCTCGGGTC
GGCGAGCGTCAGGGGAGCGATCACCTCGGACTGGGCCGAATACTGGAATG
CCGACGACGGAACCGGTGGGGGAGCGATGCCCCAGACCTGGACGGCGCTG
GCGCTAGTTGTCGATGCGCTCGGG
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