mRNA_M-pyrifera_M_contig77695.18277.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig77695.18277.1 vs. uniprot
Match: L8GPA8_ACACA (Ubiquitinyl hydrolase 1 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GPA8_ACACA) HSP 1 Score: 126 bits (316), Expect = 1.120e-28 Identity = 84/301 (27.91%), Postives = 156/301 (51.83%), Query Frame = 1 Query: 7 EHIEYLFAAKIRPINPSVFDAPTFTLLRSLSLAAIPLKPPPSSDGAEEDLTKSSRFFGIHFAWNMLQDGNYELLSKDSKGHAFQVVRDFLGWQLCFELRELFITRCIANLKRFTTISMSLKVAMSALSTFAQEGSAG-----PLLCRLDEEQLLLSVIFHALTEYKRMAVAAAQERTEKGDLEEGQELGSLKLCGNASHHETMQDFFGLLEFILTHSSLMLNTEQIDSLWQSLVVNTISEADRDRAFVWLDSLVKNAKLGHKPFSDKDCMYILLQKIPTLEFNILSFAGYNLVQCYFYYAN 894 E +EYLF KI+ I + +D TF+L++++S+ I L + E + +++G+ W ++QD + + AF+ + FL W C ELR +I C+ NLK ++ SLK+ L ++ + G ++ L+ L++ F L +K A AA+ + G G +L L G ++ ++D LE+IL+HS L+L QID+ W S++V+ ++ +RD F+W+ + V+N++ + +++ YI QK+P ++F+ L+ G++ + +F Y N Sbjct: 420 EAVEYLFQ-KIKTIPYASYDTHTFSLIQAISVRGINL----CFNLPEGE----KKWYGVDIWWEIIQDETD--VPPATATEAFRFLETFLTWVYCHELRPKYIGLCMQNLKEGKSVPFSLKLLQKLLDSYPAKKEKGMEAQAQMIDLLEVNSGLMATFFEDLHRFKSKAKEAAKALADAGQT--GVDLNQQALVGKQAYIFQIKDRLDFLEYILSHSPLVLQAPQIDAFWASVIVDALTLEERDHGFLWVQN-VRNSQ-QFQAITEESTQYIFEQKVPLMDFSALTQKGFHFFEYFFRYVN 705
BLAST of mRNA_M-pyrifera_M_contig77695.18277.1 vs. uniprot
Match: UPI000644980A (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644980A) HSP 1 Score: 108 bits (270), Expect = 1.180e-22 Identity = 78/303 (25.74%), Postives = 153/303 (50.50%), Query Frame = 1 Query: 1 QMEHIEYLFAAKIRPINPSVFDAPTFTLLRSLSLAAIPLKPPPSSDGAEEDLTKSSRFFGIHFAWNMLQDGNYELLSKDSK--GHAFQVVRDFLGWQLCFELRELFITRCIANLKRFTTISMSLKVAMSALSTFAQEGSAGPLLCRLDEEQLLLSVIFHALTEYKRMAVAAAQERTEKGDLEEGQELGSLKLCGNASHHETMQDFFGLLEFILTHSSLMLNTEQIDSLWQSLVVNTISEADRDRAFVWLDSLVKNAKLGHKP---FSDKDCMYILLQKIPTLEFNILSFAGYNLVQCYFYYAN 894 Q++HI + I + S FD L +LS+ +I + P +SD L+ + +++G+ W ++QDGN + S D + ++ L C LR +I +C+ NL+ F ++ SL + +S + F ++ G +L L+ + + + F ++ YK++ + R+ L + L + G H + +Q LE+I++ +S+MLN +Q+D LW +LV + ++ +++ F WL KN KL K F ++ ++ L+K+ L+++ + + Y + + YF+Y N Sbjct: 561 QLDHIYDVINKTISTLKSSEFDNDLQQFLYNLSMISI--QHPDNSD-----LSANHKWYGVDLFWRLMQDGN-TVGSGDQVLCMRSLPLLVALLRLPECATLRTQYIDQCVENLRTFNSVHQSLSLIISIVELFPKKQQRG-VLESLESKHKIFDLFFKEISHYKKVVMG----RSAGLSLSSVEALNLAVIFGLFPHIQQIQGRLEFLEYIISQTSIMLNIQQVDLLWDALVRDAMTPEEKEICFAWL----KNTKLQGKERIAFPEQVVRHLFLEKMSNLDWSSMGLSSYCVFERYFFYIN 846
BLAST of mRNA_M-pyrifera_M_contig77695.18277.1 vs. uniprot
Match: A0A0L0DFD0_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DFD0_THETB) HSP 1 Score: 100 bits (249), Expect = 6.370e-20 Identity = 75/253 (29.64%), Postives = 117/253 (46.25%), Query Frame = 1 Query: 175 FGIHFAWNMLQDGNYELLSKDSKGHAFQVVRDFLGWQLCFELRELFITRCIANLKRFTTISMSLKVAMSALSTFAQEGSAGPL-------------LCRLDEEQLLLSVIFHALTEYKRMAVAAAQERTEKGDLEEGQELGSLKLCGNASHHETMQDFFGLLEFILTHSSLMLNTEQIDSLWQSLVVNTISEADRDRAFVWLDSLVKNAKLGHKPFSDKDCMYILLQKIPTLEFNILSFAGYNLVQCYFYYAN 894 +G+ W +LQD + L + A V+ + LGWQ R ++ RCIANL+ +I +L++ +ST++ G + + L EE LL V F L YK A AAA G ++ + KL G H +++ L +LT S + LN EQ+D+LW+SLVV+ + +++ AF WL+ N + FS + YI K L F ++ GY + +F Y N Sbjct: 596 YGLPLLWELLQDEAH--LPESLAVQASTVLYELLGWQCGHVERAEYMERCIANLREHKSICATLQLLRKIVSTYSSGAGRGAVGGGEQVPDSMASVVAWLAEEHALLDVFFADLVHYKAAASAAAVAARASGADDDA--INRSKLFGAQGHIVNIRERLQFLNTVLTMSDVGLNHEQVDALWESLVVSPTTVLEQEEAFRWLE----NTCAVPESFSYELVRYIFDVKARDLSFVSITLQGYRFYEYFFRYIN 840
BLAST of mRNA_M-pyrifera_M_contig77695.18277.1 vs. uniprot
Match: F4PK32_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PK32_CAVFA) HSP 1 Score: 92.8 bits (229), Expect = 3.010e-17 Identity = 69/300 (23.00%), Postives = 133/300 (44.33%), Query Frame = 1 Query: 16 EYLFAAKIRPINPSVFDAPTFTLLRSLSLAAIPLKPPPSSDGAEEDLTKSSRFFGIHFAWNMLQDGNYEL-------LSKDSKGHAFQVVRDFLGWQLCFELRELFITRCIANLKRFTTISMSLKVAMSALSTFAQEGSAGPLLCRLDEEQLLLSVIFHALTEYKRMAVAAAQERTEKGDLEEGQELGSLKLCGNASHHETMQDFFGLLEFILTHSSLMLNTEQIDSLWQSLVVNTISEADRDRAFVWLDSLVKNAKLGHKPFSDKDCMYILLQKIPTLEFNILSFAGYNLVQCYFYYAN 894 EY I + S FD + + S +I +E++ + +G+ W ++QD + ++ L SK + +++ Q C LR +I I N+K ++ SL + ++ + F + ++ L+++ + + F + YK+ A KG L + CG H +Q F LEF+L+ SS+MLN +Q+D +W + V + ++E + + F WL S + A F + Y+ ++K+ +L++ L+ Y + + YF+Y N Sbjct: 564 EYFNKTLINSLKASDFDNELLNFIFNFSRISIQ---------HQENILTLKKCYGVDIFWRLIQDNDSQIADQYTQTLCTKSKSYLISLLK----LQECIGLRTQYIDLAIENIKNNVSVVQSLSLIVNIVELFVAK-KLRSVIESLEQKSKIFDIFFKEMAAYKKTVSAKV-----KGTLH-ATPVNQTVFCGLFPHLYQIQARFDFLEFLLSQSSIMLNVQQVDVMWDAFVTHHLTEEESEIFFSWLKS-TRIAGRDRVAFHENVVKYLFIEKMSSLDWTSLTPTSYAVFERYFFYIN 842
BLAST of mRNA_M-pyrifera_M_contig77695.18277.1 vs. uniprot
Match: A0A8J4UPR8_9MYCE (USP domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UPR8_9MYCE) HSP 1 Score: 76.3 bits (186), Expect = 1.120e-11 Identity = 66/315 (20.95%), Postives = 136/315 (43.17%), Query Frame = 1 Query: 7 EHIEYLFAAKIRPIN---PSVFDAPTFTLLRSLSLAAIPLKPPPSSDGAEEDLTKSSRFFGIHFAWNM----LQDGNYELLSKDSKGHAFQVVRDFLGWQLCFELRELFITRCIANLKRFTTISMSLKVAMSALSTFAQEGSAGPLLCRLDEEQLLLSVIFHALTEYKRMAVAAAQ----------ERTEKGDLEEGQELGSLKLCGNASHHETMQDFFGLLEFILTHSSLMLNTEQIDSLWQSLVVNTISEADRDRAFVWLDSLVKNAKLG--HKPFSDKDCMYILLQKIPTLEFNILSFAGYNLVQCYFYYAN 894 E +EYL+ + + IN S FD + L + + +I +E + + FG+ W + +D + L + + L Q C +R ++ I NLK T I SL + ++ + Q+ L+++ + + F ++ YK++++ ++ ++ + + + G H + LEFIL+ S+ MLN +Q+D LW SLV N ++ +R+ F+WL KN K+ S+ ++ L+K+ +++ L + +++ + +F++ N Sbjct: 655 ESVEYLYNSICKTINILRVSEFDNEFLSFLFNFATLSI--------QHSENFSGSNKKLFGLEIFWRLSTQQCEDASERELYQSLCIRSRNQFISLLKLQECTSMRTYYLECAIENLKNNTAIVESLDLIINIIDPKKQKSYIEI----LEQKYKIFDLFFKEISNYKKVSLEKSKLNIGNSXXXXXXADQNHQQLDSDFNNTVFVGQFPHLTQIHVRIQFLEFILSQSNFMLNIQQVDILWDSLVTNALTIEERESCFLWL----KNTKISGQRSTLSESVVKHLFLEKMSNMDWYHLGPSSFSVYERFFFFLN 953
BLAST of mRNA_M-pyrifera_M_contig77695.18277.1 vs. uniprot
Match: X6MR44_RETFI (Ubiquitin carboxyl-terminal hydrolase family protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MR44_RETFI) HSP 1 Score: 70.9 bits (172), Expect = 6.780e-10 Identity = 59/236 (25.00%), Postives = 109/236 (46.19%), Query Frame = 1 Query: 181 IHFAWNMLQDGNYELLSKDSK--GHAFQVVRDFLGWQLCFELRELFITRCIANLKRFTTISMSLKVAMSALSTFAQEGSAG-----------PLLCRLDEEQLLLSVIFHALTEYKRMAVAAAQE-RTEKGDLEEGQE----LGSLKLCGNA--SHHETMQDFFGLLEFILTHSSLMLNTEQIDSLWQSLVVNTISEADRDRAFVWLDSLVKNAKLGHKPFSDKDCMYILLQKIPT 828 I W ++QD + S D K A ++++ L ELRE + RCI NL ++ +SL+V L +A S+ ++ +L+ + ++ F + +K A A A+E RT + E + + +K G+ S+ + +++ L+FIL S+L L ++ID +W S+VVN ++ +R+ AF W ++ L + D ++ + K T Sbjct: 480 IKILWKLVQDES----SVDDKLVNEAKNLMKEVLTTYFARELREPLLKRCIDNLVEHKSVIISLQVLEKVLQIYATPSSSPMPPMMDDLHRWEIIAKLNTQYAMMKHFFADIEFFKEKASAKAKEIRTAYNEKELSAKYFAAVNQMKSVGSPRFSYLDEVKERLDFLDFILGFSNLRLEKQEIDIIWNSMVVNCLTPDEREEAFKWFQKMMTG--LRFRSLGDDLPQHLFINKFLT 709
BLAST of mRNA_M-pyrifera_M_contig77695.18277.1 vs. uniprot
Match: A0A078B695_STYLE (Ubiquitin carboxyl-terminal hydrolase family protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078B695_STYLE) HSP 1 Score: 63.2 bits (152), Expect = 2.410e-7 Identity = 56/252 (22.22%), Postives = 104/252 (41.27%), Query Frame = 1 Query: 181 IHFAWNMLQDGNYELLSKDSKGHAFQVVRDFL-GWQLCFELRELFITRCIANLKRFTTISMSLKVAMSALSTFAQEGSAGPLLCR-----------LDEEQLLLSVIFHALTEYKRMAVAAAQERTEKGDLEEGQELGSLKLCGNASHHETMQDFFGLLEFILTHSSLMLNTEQIDSLWQSLVVNTISEADRDRAFVWLDSLVKNAKLGHKPFSDKDCMYILLQKIPTLE--FNILSFAGYNLVQCYFYYAN 894 I W ++ N E L K +A + D L W+ +L +I R I N+K I + + + + G L+ + L+++ L+ + F T Y A + + + + + + L H E + L +++THS++ L EQ+ LW LVV++++ D D + WL + K+ G + + + +KI E F L++ G+N +Q +F N Sbjct: 629 IELFWKIITS-NLETLDKQIMIYAANSINDILKNWENAQKLP--YIIRVIENIKNTLIIKSYPEDDPDDIFS-VENGKTDHLIPQYFKSRMDFIDWLEDDHKLMQLFFDNFTHYLFKARRGYRSKMDNDQNFDKKPIFDQTLAEVFIHSEQLSQRMEFLSYVITHSNIYLEKEQLGILWDELVVHSLTNQDSDMIYKWLQGICKSQYEGIQVVEIESLIQFFKEKIANQERTFQHLTYEGFNCIQSFFVLIN 876
BLAST of mRNA_M-pyrifera_M_contig77695.18277.1 vs. uniprot
Match: A0A7E5W283_TRINI (Ubiquitinyl hydrolase 1 n=12 Tax=Noctuidae TaxID=7100 RepID=A0A7E5W283_TRINI) HSP 1 Score: 55.8 bits (133), Expect = 5.820e-5 Identity = 65/249 (26.10%), Postives = 100/249 (40.16%), Query Frame = 1 Query: 178 GIHFAWNMLQDGNYELLSKDSKGHAFQVVRDFLGWQLCFE----LRELFITRCIANLKRFTTISMSLKVAMSALSTFAQEGSAGPLLCRLDEEQLLLSVIFHALTEYKRMAVAAAQERTEKGDLEEGQELGSLKLCGNASHHETMQDFFGLLEFILTHSS-------LMLNTEQIDSLWQSLVVNTISEADRDRAFVWLDSLVKNAKLGHKPFSDKDCM------YILLQKIPTLEFNILSFAGYNLVQ 873 G W++LQDGN E L + G A + + LCF +R FI C+ NL ++++SL++ S+F Q L +D Q V+ A E M + R G + G A H+ + + L F+ S L EQ++ LWQ LVV SE D + WL L H D+ + ++ ++K+PTL+ +S G +L Q Sbjct: 747 GNTLLWDLLQDGNIEQLGE---GLALEAEKALCAL-LCFSTDKFIRIKFIEGCLDNLANHRSVAVSLRLLPKLFSSFQQ-------LRGMDMHQ----VVMWAERERGMMRLFLEDLR---------HYTGVARAPGEAPHYAHITELTVRLHFLTAIFSPVGSPQHFRLTVEQVEELWQCLVVRGSSEC-ADCLYSWL--------LSHTKSPDQHALGLDALRFLYVEKMPTLDPETISIMGLSLYQ 962 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77695.18277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig77695.18277.1 >prot_M-pyrifera_M_contig77695.18277.1 ID=prot_M-pyrifera_M_contig77695.18277.1|Name=mRNA_M-pyrifera_M_contig77695.18277.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=297bp MEHIEYLFAAKIRPINPSVFDAPTFTLLRSLSLAAIPLKPPPSSDGAEEDback to top mRNA from alignment at M-pyrifera_M_contig77695:38..931- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig77695.18277.1 ID=mRNA_M-pyrifera_M_contig77695.18277.1|Name=mRNA_M-pyrifera_M_contig77695.18277.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig77695:38..931- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig77695:38..931- >mRNA_M-pyrifera_M_contig77695.18277.1 ID=mRNA_M-pyrifera_M_contig77695.18277.1|Name=mRNA_M-pyrifera_M_contig77695.18277.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1782bp|location=Sequence derived from alignment at M-pyrifera_M_contig77695:38..931- (Macrocystis pyrifera P11B4 male)back to top |