mRNA_M-pyrifera_M_contig77626.18267.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig77626.18267.1
Unique NamemRNA_M-pyrifera_M_contig77626.18267.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig77626.18267.1 vs. uniprot
Match: A0A7S1GAQ8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAQ8_9STRA)

HSP 1 Score: 213 bits (543), Expect = 6.940e-67
Identity = 112/183 (61.20%), Postives = 144/183 (78.69%), Query Frame = 1
Query:    1 RMWDQVDGSTWIQYVSQEPSGRDEVRTLQERLDRKLTERQARQHGICAVREELYAQCFQELIRQVTLESPERGLLLLRVRDEARMTLDAYRTLFEASVTFGVRKQLQAEEGMPALRRKVEELRAAKQRLDARVLTLRNQADVLERRHAERKALEAQRFKEEIDFLRHQNKHLEHFLRSLPGAG 549
            RMW     + W+QYVS+ P+ R +V  LQE LD KL ERQAR+ GIC VRE+LY+QCF ELIRQVT+ SPERGLLLLRVRDE RMT+DAY+TL+E+SVTFGVRKQLQAE+G+  +  K+EEL  AK+ L  +VL LRN+ +V+E+R  ER+ LE ++ KEEIDFL++Q +HL+ FL++L G G
Sbjct:   60 RMWADEGAADWMQYVSKTPASRLDVINLQEALDEKLMERQAREMGICPVREDLYSQCFDELIRQVTINSPERGLLLLRVRDEIRMTIDAYKTLYESSVTFGVRKQLQAEQGLAEMESKIEELSEAKKDLQNQVLELRNKVEVIEKRATERRQLEEKKRKEEIDFLKYQGQHLDQFLKTLGGPG 242          
BLAST of mRNA_M-pyrifera_M_contig77626.18267.1 vs. uniprot
Match: A0A7S2CCB2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CCB2_9STRA)

HSP 1 Score: 203 bits (517), Expect = 5.170e-63
Identity = 111/182 (60.99%), Postives = 142/182 (78.02%), Query Frame = 1
Query:    1 RMWDQVDGSTWIQYVSQEPSGRDEVRTLQERLDRKLTERQARQHGICAVREELYAQCFQELIRQVTLESPERGLLLLRVRDEARMTLDAYRTLFEASVTFGVRKQLQAEEGMPALRRKVEELRAAKQRLDARVLTLRNQADVLERRHAERKALEAQRFKEEIDFLRHQNKHLEHFLRSLPGA 546
            R W Q  G TW+QYVS++ + R +V  LQE LD++L ERQAR+ GIC VRE+LY+QCF ELIRQVTL+ PERGLL LRVRDE +MT+DAY+ L+E+SVTFGVRKQLQAE+GM  L  ++E L AAK+ L+ +VL LRN+ +V E+R  ERK LE ++ KEEIDFL++Q +HL+ FLR L G 
Sbjct:   57 REWTQESG-TWMQYVSKDSATRLDVINLQEMLDKRLLERQARETGICPVREDLYSQCFDELIRQVTLDGPERGLLTLRVRDEIKMTIDAYKILYESSVTFGVRKQLQAEQGMAELESEIEGLEAAKKELENQVLELRNKVEVSEKRGNERKTLEDKKRKEEIDFLKYQGQHLDSFLRQLGGG 237          
BLAST of mRNA_M-pyrifera_M_contig77626.18267.1 vs. uniprot
Match: F0Y5N0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5N0_AURAN)

HSP 1 Score: 200 bits (508), Expect = 2.800e-62
Identity = 106/185 (57.30%), Postives = 143/185 (77.30%), Query Frame = 1
Query:    1 RMWDQVDGSTWIQYVSQEPSGRDEVRTLQERLDRKLTERQARQHGICAVREELYAQCFQELIRQVTLESPERGLLLLRVRDEARMTLDAYRTLFEASVTFGVRKQLQAEEGMPALRRKVEELRAAKQRLDARVLTLRNQADVLERRHAERKALEAQRFKEEIDFLRHQNKHLEHFLRSLPGAGGK 555
            R W Q  G TW+QYVS++ + R +V +LQE LD++L +RQAR  GIC VRE+LY+QC+ ELIRQ+TL+ PERGLLLLRVRDE RMT+DAY+ L+++SVTFG+RKQLQAE+GM  L  ++ EL A  + L+ +VL LRN  +V+E+R  E KA+E ++ K+EIDFL++Q +HL+ FLR L   GGK
Sbjct:    9 REWTQTSG-TWMQYVSKKTATRMDVISLQEDLDKRLLDRQARDAGICPVREDLYSQCYDELIRQITLDGPERGLLLLRVRDEIRMTIDAYKVLYDSSVTFGIRKQLQAEQGMSELEGRIAELEAENKDLENQVLELRNGVEVIEKRENEHKAVEDKKRKDEIDFLKYQGQHLDAFLRQLGPVGGK 192          
BLAST of mRNA_M-pyrifera_M_contig77626.18267.1 vs. uniprot
Match: A0A8J2S909_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S909_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.060e-61
Identity = 109/182 (59.89%), Postives = 140/182 (76.92%), Query Frame = 1
Query:    1 RMWDQVDGSTWIQYVSQEPSGRDEVRTLQERLDRKLTERQARQHGICAVREELYAQCFQELIRQVTLESPERGLLLLRVRDEARMTLDAYRTLFEASVTFGVRKQLQAEEGMPALRRKVEELRAAKQRLDARVLTLRNQADVLERRHAERKALEAQRFKEEIDFLRHQNKHLEHFLRSLPGA 546
            R W +  G TW+QYVS+ P+ R +V  +QE LD KL ERQAR  GIC VRE+LYAQCF ELIRQ+TL+ PERGLLLLRVRDE RMT+DAY+ L+++SVTFGVRKQLQAE+GM  L+ +V EL A  + L+ RVL LRN  +V+E+R +E KA+  ++ K+EIDFL++Q +HL+ FLR L  A
Sbjct:   52 REWTEPTG-TWMQYVSKAPASRTDVIAMQEALDAKLLERQARDAGICPVREDLYAQCFDELIRQLTLDGPERGLLLLRVRDEVRMTVDAYKVLYDSSVTFGVRKQLQAEQGMAELQGRVAELEAENKDLENRVLELRNGVEVVEKRASEHKAMADKKRKDEIDFLKYQGQHLDQFLRQLGPA 232          
BLAST of mRNA_M-pyrifera_M_contig77626.18267.1 vs. uniprot
Match: A0A2D4C553_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C553_PYTIN)

HSP 1 Score: 199 bits (506), Expect = 3.690e-61
Identity = 102/182 (56.04%), Postives = 142/182 (78.02%), Query Frame = 1
Query:    1 RMWDQVDGSTWIQYVSQEPSGRDEVRTLQERLDRKLTERQARQHGICAVREELYAQCFQELIRQVTLESPERGLLLLRVRDEARMTLDAYRTLFEASVTFGVRKQLQAEEGMPALRRKVEELRAAKQRLDARVLTLRNQADVLERRHAERKALEAQRFKEEIDFLRHQNKHLEHFLRSLPGA 546
            +MW + D   W++Y S  PS R +V  LQE +D KL +RQAR++GICAVRE++Y QCF ELIR+V + SPERGLLLLRVRDE R+T DAY+TL+E+S+TFG+RKQLQAE+GM  L  ++ +L+  KQ  +++VL L N+ +++E+R  ERKAL+ ++FKEEIDFL++Q +HLE FL+S  G+
Sbjct:   60 QMWREEDSGYWMRYASPTPSTRFDVIKLQEEMDAKLMKRQARENGICAVREDIYRQCFDELIREVAINSPERGLLLLRVRDEIRLTTDAYKTLYESSITFGIRKQLQAEDGMGDLLDRIAKLQKEKQEHESKVLELTNRLELIEKRATERKALQDKKFKEEIDFLKYQGQHLEAFLKSAGGS 241          
BLAST of mRNA_M-pyrifera_M_contig77626.18267.1 vs. uniprot
Match: A0A8K1C6X6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6X6_PYTOL)

HSP 1 Score: 197 bits (501), Expect = 1.860e-60
Identity = 100/182 (54.95%), Postives = 141/182 (77.47%), Query Frame = 1
Query:    1 RMWDQVDGSTWIQYVSQEPSGRDEVRTLQERLDRKLTERQARQHGICAVREELYAQCFQELIRQVTLESPERGLLLLRVRDEARMTLDAYRTLFEASVTFGVRKQLQAEEGMPALRRKVEELRAAKQRLDARVLTLRNQADVLERRHAERKALEAQRFKEEIDFLRHQNKHLEHFLRSLPGA 546
            +MW + D   W++YVS  PS R +V  LQE +D KL +RQAR++GIC VRE++Y QCF ELIR+V + SPERGLLLLRVRDE R+T DAY+TL+E+S+TFG+RKQLQAEEGM  L  ++  L+  KQ  +++VL L N+ +++E+R  ER+AL+ ++FKEE+DFL++Q +HL+ FL+S  G+
Sbjct:   59 QMWHEEDTGYWMRYVSATPSTRFDVIKLQEEMDAKLMKRQARENGICPVREDIYHQCFDELIREVAINSPERGLLLLRVRDEIRLTTDAYKTLYESSITFGIRKQLQAEEGMDQLHERIAALQHEKQEHESKVLELTNRLELIEKRATERRALQDKKFKEELDFLKYQGQHLDAFLKSAGGS 240          
BLAST of mRNA_M-pyrifera_M_contig77626.18267.1 vs. uniprot
Match: A0A024UH61_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024UH61_9STRA)

HSP 1 Score: 196 bits (497), Expect = 5.200e-60
Identity = 102/181 (56.35%), Postives = 142/181 (78.45%), Query Frame = 1
Query:    7 WDQVDGSTWIQYVSQEPSGRDEVRTLQERLDRKLTERQARQHGICAVREELYAQCFQELIRQVTLESPERGLLLLRVRDEARMTLDAYRTLFEASVTFGVRKQLQAEEGMPALRRKVEELRAAKQRLDARVLTLRNQADVLERRHAERKALEAQRFKEEIDFLRHQNKHLEHFLRSLPGAG 549
            W +  G  W++Y S EPS R +V  LQE++D KL +RQAR+ GIC VRE++YAQCF ELIR+VT+ SPERGLLLLR+RDE RMT DAY+TL+++S+TFGVRKQLQAE+GM ++  K+  L   K+  + +VL L N+ +V+E+R +ER+AL+ +R+KEEI+FL++Q +HL+ FL+S  GAG
Sbjct:   56 WKEETGH-WMRYTSAEPSTRFDVIKLQEQMDAKLIKRQARESGICNVREDIYAQCFDELIREVTINSPERGLLLLRIRDEIRMTTDAYKTLYDSSITFGVRKQLQAEQGMGSIEDKIALLAEEKREYENKVLELTNKLEVIEKRGSERRALQEKRYKEEIEFLKYQGQHLDAFLKSAGGAG 235          
BLAST of mRNA_M-pyrifera_M_contig77626.18267.1 vs. uniprot
Match: A0A1V9YGG0_9STRA (Dynein light chain intermediate polypeptide n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YGG0_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.080e-59
Identity = 100/179 (55.87%), Postives = 138/179 (77.09%), Query Frame = 1
Query:   19 DGSTWIQYVSQEPSGRDEVRTLQERLDRKLTERQARQHGICAVREELYAQCFQELIRQVTLESPERGLLLLRVRDEARMTLDAYRTLFEASVTFGVRKQLQAEEGMPALRRKVEELRAAKQRLDARVLTLRNQADVLERRHAERKALEAQRFKEEIDFLRHQNKHLEHFLRSLPGAGGK 555
            D   W++Y S EPS R +V  LQE++D KL +RQAR+ GIC VRE++YAQCF ELIR+VT+ SPERGLLLLR+RDE RMT DAY+TL+E+S+TFGVRKQLQAE+GM +L  ++  L   K+  + +VL L N+ +V+E+R +ER+ L+ +R+KEEI+FL++Q +HL+ FL+S  G   K
Sbjct:   59 DTGYWMRYTSAEPSTRFDVIKLQEQMDAKLIKRQARESGICPVREDIYAQCFDELIREVTINSPERGLLLLRIRDEIRMTTDAYKTLYESSITFGVRKQLQAEQGMGSLEDRIAVLTEEKREFENKVLELTNKLEVIEKRSSERRTLQEKRYKEEIEFLKYQGQHLDAFLKSAGGGASK 237          
BLAST of mRNA_M-pyrifera_M_contig77626.18267.1 vs. uniprot
Match: A0A662WWF1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWF1_9STRA)

HSP 1 Score: 192 bits (487), Expect = 4.310e-59
Identity = 101/183 (55.19%), Postives = 137/183 (74.86%), Query Frame = 1
Query:    4 MWDQVDGSTWIQYVSQEPSGRDEVRTLQERLDRKLTERQARQHGICAVREELYAQCFQELIRQVTLESPERGLLLLRVRDEARMTLDAYRTLFEASVTFGVRKQLQAEEGMPALRRKVEELRAAKQRLDARVLTLRNQADVLERRHAERKALEAQRFKEEIDFLRHQNKHLEHFLRSLPGAGG 552
            MW +     W++Y S  PS R +V  LQE LD KL +RQAR++GIC VRE+LYAQ F ELIR+VTL  PERGLLLLRVRDE R+T DAY+TL+++S+TFGVRKQLQAE+GM  L  ++ +L+  K   ++RV  L N+ +V+E+R AERK L+ ++ KEE+DFL++Q +HL+ FL+S  G+ G
Sbjct:    1 MWSEESSGFWLRYASNVPSTRFDVLQLQEALDGKLLQRQARENGICPVREDLYAQAFDELIREVTLNCPERGLLLLRVRDELRLTTDAYKTLYDSSITFGVRKQLQAEDGMGDLADRIAQLQLEKAEGESRVAELANKLEVIEKRAAERKTLQEKKCKEELDFLKYQGQHLDAFLKSAGGSNG 183          
BLAST of mRNA_M-pyrifera_M_contig77626.18267.1 vs. uniprot
Match: A0A418B494_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B494_9STRA)

HSP 1 Score: 192 bits (487), Expect = 4.890e-59
Identity = 103/183 (56.28%), Postives = 141/183 (77.05%), Query Frame = 1
Query:    1 RMWDQVDGSTWIQYVSQEPSGRDEVRTLQERLDRKLTERQARQHGICAVREELYAQCFQELIRQVTLESPERGLLLLRVRDEARMTLDAYRTLFEASVTFGVRKQLQAEEGMPALRRKVEELRAAKQRLDARVLTLRNQADVLERRHAERKALEAQRFKEEIDFLRHQNKHLEHFLRSLPGAG 549
            R W +  G  W++Y S EPS R +V  LQE++D KL +RQAR+ GIC VRE++YAQCF ELIR+VT+ SPERGLLLLR+RDE RMT DAY+TL+++S+TFGVRKQLQAE+GM ++  KV   R      + +VL L N+ +V+E+R +ER+AL+ +R+KEEI+FL++Q +HL+ FL+S  GAG
Sbjct:   18 RTWKEETGH-WMRYTSAEPSTRFDVIKLQEQMDAKLIKRQARESGICNVREDIYAQCFDELIREVTINSPERGLLLLRIRDEIRMTTDAYKTLYDSSITFGVRKQLQAEQGMGSIEDKVHHDRE----YENKVLELTNKLEVIEKRGSERRALQEKRYKEEIEFLKYQGQHLDAFLKSAGGAG 195          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77626.18267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1GAQ8_9STRA6.940e-6761.20Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2CCB2_9STRA5.170e-6360.99Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0Y5N0_AURAN2.800e-6257.30Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2S909_9STRA1.060e-6159.89Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A2D4C553_PYTIN3.690e-6156.04Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A8K1C6X6_PYTOL1.860e-6054.95Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024UH61_9STRA5.200e-6056.35Uncharacterized protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A1V9YGG0_9STRA1.080e-5955.87Dynein light chain intermediate polypeptide n=4 Ta... [more]
A0A662WWF1_9STRA4.310e-5955.19Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A418B494_9STRA4.890e-5956.28Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77626contigM-pyrifera_M_contig77626:26..734 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score203.4
Seed ortholog evalue9.4e-50
Seed eggNOG ortholog44056.XP_009035586.1
KEGG koko:K10410
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
EggNOG free text desc.dynein heavy chain binding
EggNOG OGsKOG4001@1,KOG4001@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Exons2
Model size558
Cds size555
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77626.18267.1prot_M-pyrifera_M_contig77626.18267.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig77626 26..731 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816677.2337997-CDS-M-pyrifera_M_contig77626:25..3911622816677.2337997-CDS-M-pyrifera_M_contig77626:25..391Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77626 26..391 -
1692278113.8644383-CDS-M-pyrifera_M_contig77626:25..3911692278113.8644383-CDS-M-pyrifera_M_contig77626:25..391Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77626 26..391 -
1622816677.2469568-CDS-M-pyrifera_M_contig77626:542..7311622816677.2469568-CDS-M-pyrifera_M_contig77626:542..731Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77626 543..731 -
1692278113.877489-CDS-M-pyrifera_M_contig77626:542..7311692278113.877489-CDS-M-pyrifera_M_contig77626:542..731Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77626 543..731 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816677.2622564-UTR-M-pyrifera_M_contig77626:731..7341622816677.2622564-UTR-M-pyrifera_M_contig77626:731..734Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig77626 732..734 -
1692278113.8900077-UTR-M-pyrifera_M_contig77626:731..7341692278113.8900077-UTR-M-pyrifera_M_contig77626:731..734Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig77626 732..734 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig77626.18267.1

>prot_M-pyrifera_M_contig77626.18267.1 ID=prot_M-pyrifera_M_contig77626.18267.1|Name=mRNA_M-pyrifera_M_contig77626.18267.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp
MWDQVDGSTWIQYVSQEPSGRDEVRTLQERLDRKLTERQARQHGICAVRE
ELYAQCFQELIRQVTLESPERGLLLLRVRDEARMTLDAYRTLFEASVTFG
VRKQLQAEEGMPALRRKVEELRAAKQRLDARVLTLRNQADVLERRHAERK
ALEAQRFKEEIDFLRHQNKHLEHFLRSLPGAGGK*
back to top

mRNA from alignment at M-pyrifera_M_contig77626:26..734-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77626.18267.1 ID=mRNA_M-pyrifera_M_contig77626.18267.1|Name=mRNA_M-pyrifera_M_contig77626.18267.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=709bp|location=Sequence derived from alignment at M-pyrifera_M_contig77626:26..734- (Macrocystis pyrifera P11B4 male)
AGGATGTGGGATCAAGTGGATGGTTCCACATGGATCCAATATGTGAGCCA GGAACCGTCTGGAAGAGACGAAGTACGCACCCTCCAAGAGAGACTCGACC GGAAACTCACCGAGAGGCAGGCTAGGCAACACGGCATTTGTGCCGTCAGA GAGGAGTTGTATGCACAATGCTTCCAAGAGCTCATTCGACAAGTAAGAAG ACGAGGAAGAGGTGGGTTTTGGTGGTTGGATCAGTATTGCCTCCATTTTA CCCCTTTTCCTCCCCCCACTTCCTCCCCACTGCCCCGTCCCCGCCTCACT CCCACCACCCCACTCTCTTCTCCACCCCGATTTCTTTCCCCAGGTGACGT TGGAGAGCCCTGAGCGTGGCCTCTTGCTGCTTCGGGTGCGTGACGAGGCG CGCATGACGTTGGATGCGTACCGGACGCTGTTTGAGGCGAGCGTGACGTT CGGCGTGCGGAAGCAGCTGCAGGCGGAGGAAGGCATGCCGGCACTGCGAC GCAAAGTGGAGGAGTTGCGTGCAGCCAAACAACGGCTGGATGCGAGGGTA TTGACGCTGCGAAACCAGGCAGATGTGCTCGAACGAAGACACGCGGAGCG CAAGGCTCTCGAGGCGCAGCGCTTCAAGGAAGAAATCGACTTCCTCAGAC ACCAGAACAAGCACCTCGAACACTTTCTCAGATCACTCCCTGGAGCTGGT GGAAAGTAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig77626:26..734-

>mRNA_M-pyrifera_M_contig77626.18267.1 ID=mRNA_M-pyrifera_M_contig77626.18267.1|Name=mRNA_M-pyrifera_M_contig77626.18267.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig77626:26..734- (Macrocystis pyrifera P11B4 male)
ATGTGGGATCAAGTGGATGGTTCCACATGGATCCAATATGTGAGCCAGGA
ACCGTCTGGAAGAGACGAAGTACGCACCCTCCAAGAGAGACTCGACCGGA
AACTCACCGAGAGGCAGGCTAGGCAACACGGCATTTGTGCCGTCAGAGAG
GAGTTGTATGCACAATGCTTCCAAGAGCTCATTCGACAAATGTGGGATCA
AGTGGATGGTTCCACATGGATCCAATATGTGAGCCAGGAACCGTCTGGAA
GAGACGAAGTACGCACCCTCCAAGAGAGACTCGACCGGAAACTCACCGAG
AGGCAGGCTAGGCAACACGGCATTTGTGCCGTCAGAGAGGAGTTGTATGC
ACAATGCTTCCAAGAGCTCATTCGACAAGTGACGTTGGAGAGCCCTGAGC
GTGGCCTCTTGCTGCTTCGGGTGCGTGACGAGGCGCGCATGACGTTGGAT
GCGTACCGGACGCTGTTTGAGGCGAGCGTGACGTTCGGCGTGCGGAAGCA
GCTGCAGGCGGAGGAAGGCATGCCGGCACTGCGACGCAAAGTGGAGGAGT
TGCGTGCAGCCAAACAACGGCTGGATGCGAGGGTATTGACGCTGCGAAAC
CAGGCAGATGTGCTCGAACGAAGACACGCGGAGCGCAAGGCTCTCGAGGC
GCAGCGCTTCAAGGAAGAAATCGACTTCCTCAGACACCAGAACAAGCACC
TCGAACACTTTCTCAGATCACTCCCTGGAGCTGGTGGAAAGTAGGTGACG
TTGGAGAGCCCTGAGCGTGGCCTCTTGCTGCTTCGGGTGCGTGACGAGGC
GCGCATGACGTTGGATGCGTACCGGACGCTGTTTGAGGCGAGCGTGACGT
TCGGCGTGCGGAAGCAGCTGCAGGCGGAGGAAGGCATGCCGGCACTGCGA
CGCAAAGTGGAGGAGTTGCGTGCAGCCAAACAACGGCTGGATGCGAGGGT
ATTGACGCTGCGAAACCAGGCAGATGTGCTCGAACGAAGACACGCGGAGC
GCAAGGCTCTCGAGGCGCAGCGCTTCAAGGAAGAAATCGACTTCCTCAGA
CACCAGAACAAGCACCTCGAACACTTTCTCAGATCACTCCCTGGAGCTGG
TGGAAAGTAG
back to top