mRNA_M-pyrifera_M_contig77609.18262.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig77609.18262.1
Unique NamemRNA_M-pyrifera_M_contig77609.18262.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig77609.18262.1 vs. uniprot
Match: A0A1B6YCU7_9BACT (Uncharacterized protein n=1 Tax=Balneola sp. EhC07 TaxID=1849360 RepID=A0A1B6YCU7_9BACT)

HSP 1 Score: 175 bits (444), Expect = 2.550e-45
Identity = 114/290 (39.31%), Postives = 163/290 (56.21%), Query Frame = 1
Query:   52 GTISNGFWNTTTSGQGSGIGFDQNSQSTTGLSSINMYDTSNFNGWDFNDNWEILQEISFPYLKENVPFIVPGLKIFGNGNGSAESPLQISTLEQLDEIR---NFSGIHFELTSNIDASDTQTMNSGQGWEPIGSENNGFEATLNGNNYSINDLYINRPDSSYLGLFGVIASVGSVKNLTLTNVEITGNDYIGGLAGKSESQSIDSVGXXXXXXXXXXXXXXXXXXXYYGDVSNSFSKVDVIGSGDHVGGLVGILNATYTGDASIEHSYSTGDVSGATYVGGLVGLSHARV 912
            GTI+  FWNT TSG  +GI  D NSQS TGL+S  M D S+F G DF+  W I +E+S+P+++ NVP  +PG  +   G+G+   P QIS L QL  +    ++   H   T++IDAS+T   NSG G+ PIGS ++ F  + NG  +SI++LYI  P S   G  G  A    VKN++L+NV IT + + GGL     + S+D+V                        +SNS + V V  S  +VGGL+G   +   G + I +SY++G+V+G  YVGGL+G S   +
Sbjct:  338 GTITGSFWNTETSGLSTGIASDNNSQSATGLTSDEMLDESSFTGLDFSSTWNIYEELSYPFIQSNVPDTLPGGAVRPLGSGTEAEPFQISNLSQLRLVSADTSYWNEHLIQTADIDASETLNWNSGSGFSPIGSSSHPFTGSYNGQEHSISNLYIIAPRSGR-GFIGH-ADGALVKNISLSNVNITSSFWSGGLIAFGNNISVDNVFVSGQLTGKSYAGGLVGWIQGLVHISNSSTNVSVSSSSSNVGGLIGQSGSISEG-SYISNSYASGNVTGIDYVGGLIGSSRIEI 624          
BLAST of mRNA_M-pyrifera_M_contig77609.18262.1 vs. uniprot
Match: A0A0F2PHV8_9FIRM (Uncharacterized protein n=1 Tax=Peptococcaceae bacterium BRH_c8a TaxID=1629715 RepID=A0A0F2PHV8_9FIRM)

HSP 1 Score: 159 bits (403), Expect = 6.980e-40
Identity = 113/326 (34.66%), Postives = 164/326 (50.31%), Query Frame = 1
Query:   28 GGLTG-FNSGTISNGFWNTTTSGQGSGIGFDQNSQSTTGLSSINMYDTSNFNGWDFNDNWEILQE-ISFPYLK-ENVPFIVPGLKIFGNGNGSAESPLQISTLEQLDEIRNFSGIHFELTSNIDAS-----DTQTMNSGQGWEPIGSENNGFEATLNGNNYSINDLYINRPDSSYLGLFGVIASVGSVKNLTLTNVEITGNDYIGGLAGKSESQSIDSVGXXXXXXXXXXXXXXXXXXXYY----GDVSNSFSKVDVIGSGDHVGGLVGILNATYTGDASIEHSYSTGDVSGATY-------VGGLVGLSHARVEESFSAGNVTGF 948
            GGL G  +S T SN +++T T+G+    G  +    TT      M D + F  WDFN  W I  +  S+PYLK +N   I     +F  G G+ + P +++T EQL+++R++ G HF  T+NID +     D    N G GW  IG+    F  T NGN+Y I++L+INRPD  Y GLFG   +   +  + L ++++TG  Y+GGL G++     D                       Y    G + NS S  DV G  +  GGLVG     Y     I   +++GDV G  Y       VGGLVG S  R+E+S+++G V+G+
Sbjct: 1215 GGLIGSVSSATCSNSYYDTETTGKWDNFG--KGIPKTT----AEMVDQNTFTDWDFNTIWAIDNDPASYPYLKWQNEEHITYPPSVFAGGFGTVDDPYEVATAEQLNKVRDYPGKHFIQTANIDLTGYLGVDGPEYNDGAGWRQIGNRYTSFNGTFNGNDYVISNLFINRPDDDYQGLFGCTGNDAELTGMALDSLDVTGYSYVGGLVGQNNGHIEDCYTTGTVTGTYTQIGGLVGYNYAYSGAVGSIINSHSSADVTGH-EEAGGLVG-----YNSGGLISGCHASGDVMGVKYDDDESEQVGGLVGDSGGRIEDSYASGKVSGY 1528          
BLAST of mRNA_M-pyrifera_M_contig77609.18262.1 vs. uniprot
Match: A0A3D1GD41_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1GD41_9BACT)

HSP 1 Score: 142 bits (357), Expect = 8.660e-34
Identity = 98/325 (30.15%), Postives = 150/325 (46.15%), Query Frame = 1
Query:  136 TGLSSINMYDTSNFNGWDFNDNWEIL--QEISFPYLKENVPFIVPGLK--IFGNGNGSAESPLQISTLEQLDEIRNFSGIHFELTSNIDASDTQTMNSGQGWEPIGSENNGFEATLNGNNYSINDLYINRPDSSYLGLFGVIASVGSVKNLTLTNVEITGNDYIGGLAGKSESQSIDSVGXXXXXXXXXXXXXXXXXXXYYGDVSNSFSKVDVIGSGDH----------VGGLVGILNATYTGDASIEHS-------------------------------YSTGDVSGATYVGGLVGLSHARVEESFSAGNVTGFGNNIGGLVG 975
            TGL++  M+D++N++GWDF + W I+    +SFPYL+ N+P  +PG +  IF  G+G++ +P QI+T+ QLD +RN+   HF LT++ID +       G GWEPIG   N F    +GN ++IN L+I+     + GLFG ++     K+L+L +V +TG   + GL G +   ++ +V                    ++G    SFS   VI S              GG +G +  T     S+ +S                                 TGD++G   +GGL+G S                GN  GGLVG
Sbjct:  335 TGLTTQQMFDSTNYSGWDFTNTWTIVTGDSVSFPYLQSNIPDSIPGKQNVIFAGGDGTSGNPYQIATVTQLDSVRNYLDAHFILTADIDLN-VSPYKDGTGWEPIGDNINPFSGGFDGNGHTINKLFIDNSTQDFQGLFGTVSGKNEFKDLSLDSVNVTGRYQVAGLIGDARGANVSNV------HISGAVTGVQYTGFFFG---RSFSSTSVIDSSSXXXXXXXXXXLAGGFIGSIEDT----TSVSNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDITGNNRMGGLIGYSRXXXXXXXXXXXXXXXGNYNGGLVG 645          
BLAST of mRNA_M-pyrifera_M_contig77609.18262.1 vs. uniprot
Match: A0A8A0RQD0_9FIRM (Immunoglobulin A1 protease n=1 Tax=Koleobacter methoxysyntrophicus TaxID=2751313 RepID=A0A8A0RQD0_9FIRM)

HSP 1 Score: 127 bits (320), Expect = 5.050e-29
Identity = 107/301 (35.55%), Postives = 148/301 (49.17%), Query Frame = 1
Query:   22 HLGGLTGFNS--GTISNGFWNTTTSGQGSGIGFDQNSQSTTGLSSINMYDTSNFNGWDFNDNWEILQEISFPYLKENVPFIVPGLKIFGNGNGSAESPLQISTLEQLDEI-RNFS---GIHFELTSNIDASDTQTMNSGQGWEPIGSENNGFEATLNGNNYSINDLYINRPDSSYLGLFGVIASVGSVKNLTLTNVEITGNDYIGGLAGKSESQSIDSVGXXXXXXXXXXXXXXXXXXXYYGDVSNSFSKVDV--IGSGDHVGGLVGILNATYTGDASIEHSYSTGDVSGATYVGGLVGLS 900
            ++GG  G+     T+   +W+T TSG  +  G        TG  +  M   S F  WDF+  W+I +  ++PYL+ N     PG           +  ++I T E+L +I R+ S      + L SNID S    M+ G GW+PIG  NN F    +GN Y+I +LYINRPD+ Y GLFG   S   V N+TL +V +TG DY G LAG      I                       YY ++  S+S  D+  IGS  + GGLVG     Y G + I + Y+ G V+G T VGGLVG++
Sbjct:  403 NIGGFIGYKGLGSTVQYCYWDTETSGLTTSAGG-------TGRMTGEMKRQSTFVDWDFDTVWQIDEGETYPYLRSNPQSPPPGF----------QPAVEIFTAEELAKIGRDESYPLNAKYILKSNIDLSGY--MSDG-GWQPIGDLNNPFTGIFDGNGYTIKNLYINRPDTHYQGLFGYTRSA-KVSNVTLESVSVTGCDYTGALAGYVYKSMISGSSSSGTVAGRQHVGGLLGMNDYYSELVFSYSTADITGIGSSRYTGGLVG---TNYRG-SYIRNCYAAGSVTGNTEVGGLVGVN 678          
BLAST of mRNA_M-pyrifera_M_contig77609.18262.1 vs. uniprot
Match: A0A3M9LH06_9EURY (PKD domain-containing protein (Fragment) n=2 Tax=Methanohalophilus sp. RSK TaxID=2485783 RepID=A0A3M9LH06_9EURY)

HSP 1 Score: 127 bits (320), Expect = 6.690e-29
Identity = 77/193 (39.90%), Postives = 111/193 (57.51%), Query Frame = 1
Query:   58 ISNGFWNTTTSGQGSGIGFDQNSQSTTGLSSINMYDTSNFNGWDFNDNWEILQEIS--FPYLKENVPFIVPGLKIFGNGNGSAESPLQISTLEQLDEIRNFSGIHFELTSNIDASDTQTMNSGQGWEPIGSENNGFEATLNGNNYSINDLYINRPDSSYLGLFGVIASVGSVKNLTLTNVEITGNDYIGGLAG 630
            +S+ +WN  TSGQ S  G        TGL+   M D+SNF  WDF + W I   I+  +P L  N+ +    +  F  G+GS E+P QI T+  L  +      ++ L ++IDAS T + +  QG+EPIG+  N F  T +GN   I++L INRP +SY+GLFG    V S+ N++L +V +TGN  +GGL G
Sbjct:  746 VSDSYWNINTSGQTSSDGG-------TGLTDAQMQDSSNFVNWDFTNIWGISSGINDGYPNLL-NLNYESESVSYFSGGDGSTENPYQIITVNDLQNMSTDLSANYTLMNDIDASGTSSWDGDQGFEPIGNSTNKFTGTFDGNGSVISNLSINRPSTSYVGLFGCADEVASITNVSLEDVNVTGNYQVGGLIG 930          
BLAST of mRNA_M-pyrifera_M_contig77609.18262.1 vs. uniprot
Match: A0A2R9ST87_9BACL (GLUG domain protein n=2 Tax=Paenibacillus TaxID=44249 RepID=A0A2R9ST87_9BACL)

HSP 1 Score: 116 bits (291), Expect = 3.790e-27
Identity = 82/213 (38.50%), Postives = 116/213 (54.46%), Query Frame = 1
Query:  268 LKIFGNGNGSAESPLQISTLEQLDEIRNFSGIHFELTSNIDASDTQTMNSGQGWEPIGSE---NNGFEATLNGNNYSINDLYINRPDSSYLGLFGVIASVGSVKNLTLTNVEITGNDYIGGLAGKSESQSIDSVGXXXXXXXXXXXXXXXXXXXYYGDVSNSFSKVDVIGSGDHVGGLVGILNATYTG-DASIEHSYSTGDVSGATYVGGLVG 894
            L++  +G+GSA +P  I+TL+QL+ +RN    H+ L ++IDASDT + N+G+G+ PIG+    ++ F  +L+G  Y I +L I+RP +   GLFGV+ S G ++++ L    ITG   +GGL G++                             YG V  SF    V  +   VGG+ G     Y G D  I  SYSTGDVSG TYVGGLVG
Sbjct:   26 LQVGMSGDGSAGNPYIITTLDQLNAVRNDLDAHYRLGADIDASDTASWNNGEGFIPIGTVGIIHSEFNGSLDGAGYVIRNLTIHRPHADVAGLFGVMGSSGVLEDVALEGGSITGKLDVGGLTGRN-----------------------------YGRVDRSFVTGTVSSNEGIVGGVAG-----YNGIDGEITFSYSTGDVSGVTYVGGLVG 204          
BLAST of mRNA_M-pyrifera_M_contig77609.18262.1 vs. uniprot
Match: A0A4Q2LRJ7_9BACL (Uncharacterized protein n=1 Tax=Paenibacillaceae bacterium TaxID=2003592 RepID=A0A4Q2LRJ7_9BACL)

HSP 1 Score: 118 bits (296), Expect = 8.920e-26
Identity = 72/190 (37.89%), Postives = 99/190 (52.11%), Query Frame = 1
Query:  235 LKENVPFIVPGLKIFGNGNGSAESPLQISTLEQLDEIRNFSG--IHFELTSNIDASDTQTMNSGQGWEPIGSENNGFEATLNGNNYSINDLYINRPDSSYLGLFGVIASVGSVKNLTLTNVEITGNDYIGGLAGKSESQSIDSVGXXXXXXXXXXXXXXXXXXXYYGDVSNSFSKVDVIGSGDHVGGLVG 798
            +  +V   V   K    G G+A  P QI+T E+LD +RN+ G  ++F+L ++ID S       GQGW PIG  N+ FE  ++GN + I  L INRPD +Y GLFG I    SV N+ L NV +TG  Y+GGLAG++E                             G++ NS+ +  V G G  VGGL+G
Sbjct:  288 ITSDVTLYVKWRKTLDVGTGTASDPYQITTAEELDTVRNYLGPDLYFKLMADIDLSSY-----GQGWLPIGGSNSRFEGHMDGNGHKITGLTINRPDDNYSGLFGYIGYDASVSNMILENVNVTGKQYVGGLAGRNE-----------------------------GEIINSYVEGSVTGKGSFVGGLIG 443          
BLAST of mRNA_M-pyrifera_M_contig77609.18262.1 vs. uniprot
Match: A0A498EYH7_9EURY (PGF-pre-PGF domain-containing protein n=2 Tax=Halobellus sp. Atlit-31R TaxID=2282130 RepID=A0A498EYH7_9EURY)

HSP 1 Score: 117 bits (292), Expect = 3.340e-25
Identity = 98/358 (27.37%), Postives = 166/358 (46.37%), Query Frame = 1
Query:   19 THLGGLTGFNSGTISNGFWNTTTSGQGSGIGFDQNSQSTTGLSSINMY-DTS------------NFNGWDFNDNWEILQEISFPYLKENVPFI----------VPGLKIFGNGNGSAESPLQISTLEQLDEIRNFSGIHFELTSNIDASD-------TQTMNSGQGWEPIGSENNGFEATLNGNNYSINDLYINRPDSSYLGLFGVIASVGSVKNLTLTNVEITGNDYIGGLAGKSESQ--SIDSVGXXXXXXXXXXXXXXXXXXXYYGDVSNSFSKVDVIGSG-----DHVGGLVGILNATYTGDASIEHSYSTGDVSGATYVGGLVGLSH--ARVEESFSAGNVTGFGNNIGGLVG 975
            ++ GGL G N GT+S+ +W+   + Q   IG    S S++ L+      DT+            + + + F+  WE ++       ++  P +             +  +  G+GSA +P Q++    LD IR   G +F L  +++AS          + N G G++PIG+EN  F  + +G    I+DL I+RP+S ++GLF  I + GSVK++TL+  ++TG   +G LAG+S      ++  G                     G V    +    + SG       +GG++G+    + G   +    +  +VSG   VGG+ G+ H  A+++ +   G V G  NNIGG+VG
Sbjct:  362 SYAGGLVGGNIGTVSDSYWDKGFTNQSRAIGAKFQSGSSSNLAGFGATGDTAPAPEMQGSSASASLSRFSFSSTWETVESTETDTTRDGYPILQAIDRGTQLSAQNVNAYAGGDGSASNPYQLANWHHLDNIRQNLGANFTLVDDLNASTPGYDSVANASANGGAGFDPIGNENTPFTGSFDGTESVISDLRIDRPNSRHIGLFATIGTDGSVKSVTLSTTDMTGERVVGVLAGESYGNITDVEVSGTVTATGGNTRADIGLLVGQTRGGVIEQVAVNGTVVSGMAKQSKRIGGVIGL----HRGTTVLTDVTAYLNVSGYENVGGISGILHDDAQIKNASVTGKVVGKDNNIGGVVG 715          
BLAST of mRNA_M-pyrifera_M_contig77609.18262.1 vs. uniprot
Match: A0A3M9L5J2_9EURY (PGF-pre-PGF domain-containing protein n=2 Tax=Methanohalophilus halophilus TaxID=2177 RepID=A0A3M9L5J2_9EURY)

HSP 1 Score: 116 bits (290), Expect = 5.650e-25
Identity = 66/166 (39.76%), Postives = 94/166 (56.63%), Query Frame = 1
Query:  139 GLSSINMYDTSNFNGWDFNDNWEILQEISFPYLKENVPFIVPGLKIFGNGNGSAESPLQISTLEQLDEIRNFSGIHFELTSNIDASDTQTMNSGQGWEPIGSENNGFEATLNGNNYSINDLYINRPDSSYLGLFGVIASVGSVKNLTLTNVEITGNDYIGGLAGKS 636
            G ++  M   S F GWDF + W +++   +P  +            F  G+GS  +P ++STL  L  I      H+   S++DA+DTQ  N G GW+PIG++ N F  T +G+NY+I DLYI RP + Y+GLFG  A   ++KN+ L NV ITG D  G +AG S
Sbjct:  306 GKTTEQMQQQSTFVGWDFTNTW-LIEADEYPKFQYTR---------FAGGDGSETNPYKVSTLNHLKNINYNLAAHYVQISDLDATDTQNWNDGAGWQPIGNKENRFTGTFDGSNYTITDLYIYRPATRYVGLFGY-AYKANIKNIGLENVNITGGDDTGAVAGYS 460          
BLAST of mRNA_M-pyrifera_M_contig77609.18262.1 vs. uniprot
Match: B8I5D8_RUMCH (Uncharacterized protein n=2 Tax=Ruminiclostridium cellulolyticum TaxID=1521 RepID=B8I5D8_RUMCH)

HSP 1 Score: 116 bits (290), Expect = 5.790e-25
Identity = 109/322 (33.85%), Postives = 160/322 (49.69%), Query Frame = 1
Query:  157 MYDTSNFNGWDFNDNWEILQEISFPYLK-----ENVPFIVPGLKIFGNGNGSAESPLQISTLEQLDEIRNFSGIHFELTSN-IDASDTQTMNSGQGWEPIGSENNGFEATLNGNNYSINDLYINRPDSSYLGLFGVIASVGSVKNLTLTNVEITGNDYIGGLAGKS--ESQSIDSVGXXXXXXXXXXXXXXXXXXXYYGDVSNSFSKVDVI-GSGDHVGGLVGI----------LNATYT-GDAS----------------IEHSYSTGDVSGATYVGGLVGLSHARV-----------EESFSAGNVTGFGNNI--GGLVG 975
            M   S F+GWDF+  W + + IS+PYLK       V   +P   + G G+G+ E+P  I    Q++ I+      F++ S+ I  +D    N    W PIG+    F  + +GN ++I++L IN+P    +G FG   +   +KNL + N  ITG +Y+G L G +   S SID           XXXXXXXXXX + G++S  +S ++V+ G+G + GGLVG           +N +Y  GD +                I   Y+ G+VSG +YVGGLVG ++  +             SFS GNV G   N   GGL+G
Sbjct:  830 MTKKSTFSGWDFSSVWSVEKGISYPYLKGLPKPARVSINLPTGDVAG-GDGTPENPYVIENAAQINNIK------FDIQSSYILYNDVNLEN--MEWTPIGTNGAAFIGSFDGNGFTISNLSINQPTLDNIGFFGYTNNA-VIKNLNIINASITGRNYVGALTGYAAGSSGSIDDSSVSGTGTVTXXXXXXXXXXSFSGNISGCYSTINVVSGTGGYAGGLVGYCINNTNFIPSINRSYAAGDVTXXXXXXXXXXXXXAGNIAECYAVGNVSGVSYVGGLVGQANLNIYYNSTYYTCSISNSFSLGNVIGTDANAYAGGLLG 1141          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77609.18262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1B6YCU7_9BACT2.550e-4539.31Uncharacterized protein n=1 Tax=Balneola sp. EhC07... [more]
A0A0F2PHV8_9FIRM6.980e-4034.66Uncharacterized protein n=1 Tax=Peptococcaceae bac... [more]
A0A3D1GD41_9BACT8.660e-3430.15Uncharacterized protein (Fragment) n=1 Tax=Balneol... [more]
A0A8A0RQD0_9FIRM5.050e-2935.55Immunoglobulin A1 protease n=1 Tax=Koleobacter met... [more]
A0A3M9LH06_9EURY6.690e-2939.90PKD domain-containing protein (Fragment) n=2 Tax=M... [more]
A0A2R9ST87_9BACL3.790e-2738.50GLUG domain protein n=2 Tax=Paenibacillus TaxID=44... [more]
A0A4Q2LRJ7_9BACL8.920e-2637.89Uncharacterized protein n=1 Tax=Paenibacillaceae b... [more]
A0A498EYH7_9EURY3.340e-2527.37PGF-pre-PGF domain-containing protein n=2 Tax=Halo... [more]
A0A3M9L5J2_9EURY5.650e-2539.76PGF-pre-PGF domain-containing protein n=2 Tax=Meth... [more]
B8I5D8_RUMCH5.790e-2533.85Uncharacterized protein n=2 Tax=Ruminiclostridium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77609contigM-pyrifera_M_contig77609:27..1004 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score124.0
Seed ortholog evalue1.3e-25
Seed eggNOG ortholog1291050.JAGE01000001_gene2546
Hectar predicted targeting categoryother localisation
EggNOG free text desc.domain, Protein
EggNOG OGs1VZGP@1239,24GSA@186801,COG5492@1,COG5492@2
COG Functional cat.N
Best tax levelClostridia
Best eggNOG OGNA|NA|NA
Exons1
Model size978
Cds size978
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816677.0450754-CDS-M-pyrifera_M_contig77609:26..10041622816677.0450754-CDS-M-pyrifera_M_contig77609:26..1004Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77609 27..1004 -
1692278113.7707088-CDS-M-pyrifera_M_contig77609:26..10041692278113.7707088-CDS-M-pyrifera_M_contig77609:26..1004Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77609 27..1004 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77609.18262.1prot_M-pyrifera_M_contig77609.18262.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig77609 27..1004 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig77609.18262.1

>prot_M-pyrifera_M_contig77609.18262.1 ID=prot_M-pyrifera_M_contig77609.18262.1|Name=mRNA_M-pyrifera_M_contig77609.18262.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=326bp
GEVSGNTHLGGLTGFNSGTISNGFWNTTTSGQGSGIGFDQNSQSTTGLSS
INMYDTSNFNGWDFNDNWEILQEISFPYLKENVPFIVPGLKIFGNGNGSA
ESPLQISTLEQLDEIRNFSGIHFELTSNIDASDTQTMNSGQGWEPIGSEN
NGFEATLNGNNYSINDLYINRPDSSYLGLFGVIASVGSVKNLTLTNVEIT
GNDYIGGLAGKSESQSIDSVGVISGEVSGVDFIGGLFGENYYGDVSNSFS
KVDVIGSGDHVGGLVGILNATYTGDASIEHSYSTGDVSGATYVGGLVGLS
HARVEESFSAGNVTGFGNNIGGLVGN
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mRNA from alignment at M-pyrifera_M_contig77609:27..1004-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77609.18262.1 ID=mRNA_M-pyrifera_M_contig77609.18262.1|Name=mRNA_M-pyrifera_M_contig77609.18262.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig77609:27..1004- (Macrocystis pyrifera P11B4 male)
GGAGAAGTTTCAGGGAATACCCATTTGGGTGGGCTAACAGGTTTTAATTC TGGAACAATATCCAATGGGTTTTGGAATACGACTACAAGCGGACAAGGAT CAGGAATTGGCTTCGATCAAAATTCGCAAAGTACTACTGGTCTATCATCA ATAAATATGTATGATACATCTAATTTTAATGGATGGGATTTTAATGACAA TTGGGAAATTCTTCAGGAGATTTCATTTCCGTATTTAAAAGAGAATGTCC CTTTTATAGTACCCGGTCTCAAAATTTTTGGTAATGGAAATGGGTCTGCT GAAAGTCCATTACAAATCAGCACTTTAGAGCAGTTGGACGAAATCCGAAA TTTTTCGGGTATACATTTTGAGCTGACTTCGAATATAGATGCTTCTGATA CTCAAACTATGAATAGTGGGCAAGGTTGGGAACCGATTGGTTCAGAAAAT AATGGCTTTGAAGCTACTTTAAATGGAAATAACTATAGCATAAATGATTT GTATATCAATAGACCGGATAGCAGTTATTTGGGTTTATTTGGTGTGATAG CTTCAGTTGGTTCTGTAAAAAATTTAACCCTAACGAACGTAGAAATTACC GGTAATGATTATATCGGTGGGTTGGCGGGCAAATCTGAATCTCAGAGTAT TGATAGCGTAGGAGTGATTTCAGGAGAGGTATCAGGAGTTGATTTCATTG GTGGGCTGTTTGGTGAAAACTACTATGGAGATGTGTCAAACAGCTTTTCG AAGGTAGATGTAATCGGCTCTGGAGACCATGTTGGAGGGTTAGTTGGTAT TCTAAATGCAACCTATACGGGAGATGCATCGATTGAACATTCGTACTCTA CAGGAGATGTTAGTGGAGCGACATATGTTGGTGGTTTAGTTGGATTAAGT CATGCAAGAGTTGAAGAAAGTTTTTCTGCTGGTAATGTAACCGGATTTGG CAACAACATAGGGGGATTAGTAGGGAAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig77609:27..1004-

>mRNA_M-pyrifera_M_contig77609.18262.1 ID=mRNA_M-pyrifera_M_contig77609.18262.1|Name=mRNA_M-pyrifera_M_contig77609.18262.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1956bp|location=Sequence derived from alignment at M-pyrifera_M_contig77609:27..1004- (Macrocystis pyrifera P11B4 male)
GGAGAAGTTTCAGGGAATACCCATTTGGGTGGGCTAACAGGTTTTAATTC
TGGAACAATATCCAATGGGTTTTGGAATACGACTACAAGCGGACAAGGAT
CAGGAATTGGCTTCGATCAAAATTCGCAAAGTACTACTGGTCTATCATCA
ATAAATATGTATGATACATCTAATTTTAATGGATGGGATTTTAATGACAA
TTGGGAAATTCTTCAGGAGATTTCATTTCCGTATTTAAAAGAGAATGTCC
CTTTTATAGTACCCGGTCTCAAAATTTTTGGTAATGGAAATGGGTCTGCT
GAAAGTCCATTACAAATCAGCACTTTAGAGCAGTTGGACGAAATCCGAAA
TTTTTCGGGTATACATTTTGAGCTGACTTCGAATATAGATGCTTCTGATA
CTCAAACTATGAATAGTGGGCAAGGTTGGGAACCGATTGGTTCAGAAAAT
AATGGCTTTGAAGCTACTTTAAATGGAAATAACTATAGCATAAATGATTT
GTATATCAATAGACCGGATAGCAGTTATTTGGGTTTATTTGGTGTGATAG
CTTCAGTTGGTTCTGTAAAAAATTTAACCCTAACGAACGTAGAAATTACC
GGTAATGATTATATCGGTGGGTTGGCGGGCAAATCTGAATCTCAGAGTAT
TGATAGCGTAGGAGTGATTTCAGGAGAGGTATCAGGAGTTGATTTCATTG
GTGGGCTGTTTGGTGAAAACTACTATGGAGATGTGTCAAACAGCTTTTCG
AAGGTAGATGTAATCGGCTCTGGAGACCATGTTGGAGGGTTAGTTGGTAT
TCTAAATGCAACCTATACGGGAGATGCATCGATTGAACATTCGTACTCTA
CAGGAGATGTTAGTGGAGCGACATATGTTGGTGGTTTAGTTGGATTAAGT
CATGCAAGAGTTGAAGAAAGTTTTTCTGCTGGTAATGTAACCGGATTTGG
CAACAACATAGGGGGATTAGTAGGGAATGGAGAAGTTTCAGGGAATACCC
ATTTGGGTGGGCTAACAGGTTTTAATTCTGGAACAATATCCAATGGGTTT
TGGAATACGACTACAAGCGGACAAGGATCAGGAATTGGCTTCGATCAAAA
TTCGCAAAGTACTACTGGTCTATCATCAATAAATATGTATGATACATCTA
ATTTTAATGGATGGGATTTTAATGACAATTGGGAAATTCTTCAGGAGATT
TCATTTCCGTATTTAAAAGAGAATGTCCCTTTTATAGTACCCGGTCTCAA
AATTTTTGGTAATGGAAATGGGTCTGCTGAAAGTCCATTACAAATCAGCA
CTTTAGAGCAGTTGGACGAAATCCGAAATTTTTCGGGTATACATTTTGAG
CTGACTTCGAATATAGATGCTTCTGATACTCAAACTATGAATAGTGGGCA
AGGTTGGGAACCGATTGGTTCAGAAAATAATGGCTTTGAAGCTACTTTAA
ATGGAAATAACTATAGCATAAATGATTTGTATATCAATAGACCGGATAGC
AGTTATTTGGGTTTATTTGGTGTGATAGCTTCAGTTGGTTCTGTAAAAAA
TTTAACCCTAACGAACGTAGAAATTACCGGTAATGATTATATCGGTGGGT
TGGCGGGCAAATCTGAATCTCAGAGTATTGATAGCGTAGGAGTGATTTCA
GGAGAGGTATCAGGAGTTGATTTCATTGGTGGGCTGTTTGGTGAAAACTA
CTATGGAGATGTGTCAAACAGCTTTTCGAAGGTAGATGTAATCGGCTCTG
GAGACCATGTTGGAGGGTTAGTTGGTATTCTAAATGCAACCTATACGGGA
GATGCATCGATTGAACATTCGTACTCTACAGGAGATGTTAGTGGAGCGAC
ATATGTTGGTGGTTTAGTTGGATTAAGTCATGCAAGAGTTGAAGAAAGTT
TTTCTGCTGGTAATGTAACCGGATTTGGCAACAACATAGGGGGATTAGTA
GGGAAT
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