|
Homology
BLAST of mRNA_M-pyrifera_M_contig7753.18249.1 vs. uniprot
Match: D7FP42_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP42_ECTSI) HSP 1 Score: 170 bits (430), Expect = 5.890e-49 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 1
Query: 40 MGRRTKKVGITGKYGVRYGSSLRKVIKKIEITQHAKYTCSFCGKETTRRQVSGIWKCSACKTISAGGAYTLHTPAAVTVRSTIARLRKGQSETGK 324
MGRRTKKVGITGKYGVRYGSSLRKVIKKIEITQHA+YTC FCGK+T +R VSGIWKCSAC ISAGGAYTL+TPAAVTVRSTIARLRKG +ETGK
Sbjct: 1 MGRRTKKVGITGKYGVRYGSSLRKVIKKIEITQHARYTCPFCGKDTVKRMVSGIWKCSACGKISAGGAYTLNTPAAVTVRSTIARLRKGATETGK 95
BLAST of mRNA_M-pyrifera_M_contig7753.18249.1 vs. uniprot
Match: A0A836C955_9STRA (Putative 60S ribosomal protein L37a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C955_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.790e-39 Identity = 68/92 (73.91%), Postives = 79/92 (85.87%), Query Frame = 1
Query: 40 MGRRTKKVGITGKYGVRYGSSLRKVIKKIEITQHAKYTCSFCGKETTRRQVSGIWKCSACKTISAGGAYTLHTPAAVTVRSTIARLRKGQSE 315
MG+RTKKVGI GKYG RYG+SLRKVIKKIE++QHAKYTC FCG++T +R V GIW C CK + AGGAYTL+TPAA TVRSTIARLR+ Q+E
Sbjct: 1 MGKRTKKVGICGKYGTRYGASLRKVIKKIEVSQHAKYTCVFCGRDTVKRSVVGIWSCGGCKKVVAGGAYTLNTPAAATVRSTIARLRRAQAE 92
BLAST of mRNA_M-pyrifera_M_contig7753.18249.1 vs. uniprot
Match: A0A7S1ZP16_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZP16_TRICV) HSP 1 Score: 141 bits (355), Expect = 3.340e-37 Identity = 65/99 (65.66%), Postives = 84/99 (84.85%), Query Frame = 1
Query: 22 RHPSNT-MGRRTKKVGITGKYGVRYGSSLRKVIKKIEITQHAKYTCSFCGKETTRRQVSGIWKCSACKTISAGGAYTLHTPAAVTVRSTIARLRKGQSE 315
++ SN+ MG+RTKKVGITGKYG RYGS+LRK+I+KIE++QH+ Y C+FCGK++ +RQ +GIW C +C+ + AGGAY L TPAAVT RSTI RLRKGQ+E
Sbjct: 43 KYKSNSKMGKRTKKVGITGKYGTRYGSTLRKIIRKIEVSQHSSYRCAFCGKDSVKRQCTGIWNCKSCRKVVAGGAYMLSTPAAVTARSTIGRLRKGQAE 141
BLAST of mRNA_M-pyrifera_M_contig7753.18249.1 vs. uniprot
Match: W7TSZ0_9STRA (60s ribosomal protein l37a n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSZ0_9STRA) HSP 1 Score: 139 bits (350), Expect = 4.080e-37 Identity = 66/92 (71.74%), Postives = 78/92 (84.78%), Query Frame = 1
Query: 40 MGRRTKKVGITGKYGVRYGSSLRKVIKKIEITQHAKYTCSFCGKETTRRQVSGIWKCSACKTISAGGAYTLHTPAAVTVRSTIARLRKGQSE 315
MG+RTKKVGI GKYG RYG+SLRK+IKKIEI+QH+KYTC FCGK+ +R+V GIWKC +CK AGGAYTL T AAV VRST+ARLRK ++E
Sbjct: 1 MGKRTKKVGICGKYGTRYGASLRKIIKKIEISQHSKYTCVFCGKDNVKREVVGIWKCGSCKKSMAGGAYTLSTAAAVQVRSTLARLRKAKAE 92
BLAST of mRNA_M-pyrifera_M_contig7753.18249.1 vs. uniprot
Match: A0A7S2CLR7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CLR7_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.730e-36 Identity = 66/97 (68.04%), Postives = 77/97 (79.38%), Query Frame = 1
Query: 19 PRHPSNTMGRRTKKVGITGKYGVRYGSSLRKVIKKIEITQHAKYTCSFCGKETTRRQVSGIWKCSACKTISAGGAYTLHTPAAVTVRSTIARLRKGQ 309
P S MG+RTKKVGI GKYG RYG+SLRKVIKK+E++QHAKY C +CGK+ +RQ GIW C +CK + AGGAYTL+TPAA TVRS IARLRK Q
Sbjct: 11 PLAESTVMGKRTKKVGICGKYGTRYGASLRKVIKKMEVSQHAKYHCVYCGKDNVKRQSVGIWNCKSCKKVLAGGAYTLNTPAAATVRSAIARLRKTQ 107
BLAST of mRNA_M-pyrifera_M_contig7753.18249.1 vs. uniprot
Match: K3WD89_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD89_GLOUD) HSP 1 Score: 138 bits (347), Expect = 5.640e-36 Identity = 64/92 (69.57%), Postives = 77/92 (83.70%), Query Frame = 1
Query: 40 MGRRTKKVGITGKYGVRYGSSLRKVIKKIEITQHAKYTCSFCGKETTRRQVSGIWKCSACKTISAGGAYTLHTPAAVTVRSTIARLRKGQSE 315
G+RTKKVGI GKYG RYGSSLRKV+KKIEI+QHAKY C+FCGK++ +R V+GIWKC +C + AGGAY L+TP+A TVRST+ARLRK E
Sbjct: 53 QGKRTKKVGICGKYGTRYGSSLRKVVKKIEISQHAKYNCAFCGKDSVKRTVTGIWKCKSCFKVVAGGAYILNTPSAATVRSTLARLRKSHDE 144
BLAST of mRNA_M-pyrifera_M_contig7753.18249.1 vs. uniprot
Match: A0A485LCL6_9STRA (Aste57867_19186 protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LCL6_9STRA) HSP 1 Score: 136 bits (342), Expect = 6.320e-36 Identity = 62/90 (68.89%), Postives = 78/90 (86.67%), Query Frame = 1
Query: 40 MGRRTKKVGITGKYGVRYGSSLRKVIKKIEITQHAKYTCSFCGKETTRRQVSGIWKCSACKTISAGGAYTLHTPAAVTVRSTIARLRKGQ 309
MG+RTKKVGI GKYGVRYGSSLRKV+KKIE++QHAKY C FCGK++ +R+ +GIWKC +C ++AGGAY L+T +A TVRST+ARLRK +
Sbjct: 1 MGKRTKKVGICGKYGVRYGSSLRKVVKKIEVSQHAKYNCVFCGKDSVKRECTGIWKCKSCYKVTAGGAYLLNTASAATVRSTLARLRKAR 90
BLAST of mRNA_M-pyrifera_M_contig7753.18249.1 vs. uniprot
Match: L1K0I5_GUITC (Large subunit ribosomal protein L37Ae, cytoplasmic n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K0I5_GUITC) HSP 1 Score: 135 bits (341), Expect = 8.100e-36 Identity = 65/88 (73.86%), Postives = 74/88 (84.09%), Query Frame = 1
Query: 40 MGRRTKKVGITGKYGVRYGSSLRKVIKKIEITQHAKYTCSFCGKETTRRQVSGIWKCSACKTISAGGAYTLHTPAAVTVRSTIARLRK 303
MG+ TKKV ITGKYG RYG+SLRK IKKIEITQHAKYTCSFCGK++ +RQ GIWKC++CK AGGAYTL+TP A TVRS I RLR+
Sbjct: 1 MGKHTKKVHITGKYGTRYGASLRKQIKKIEITQHAKYTCSFCGKDSVKRQAVGIWKCASCKKCIAGGAYTLNTPTAATVRSAIRRLRE 88
BLAST of mRNA_M-pyrifera_M_contig7753.18249.1 vs. uniprot
Match: A0A1Z5K1E2_FISSO (Large subunit ribosomal protein L37Ae n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1E2_FISSO) HSP 1 Score: 135 bits (341), Expect = 8.600e-36 Identity = 63/93 (67.74%), Postives = 78/93 (83.87%), Query Frame = 1
Query: 40 MGRRTKKVGITGKYGVRYGSSLRKVIKKIEITQHAKYTCSFCGKETTRRQVSGIWKCSACKTISAGGAYTLHTPAAVTVRSTIARLRKGQSET 318
MG+RTKKVGITGKYG RYGS+LRK++KKIEI+QH+ Y C+FCGK+ +R GIW+C C+ + AGGAYTL TP+AVTVRSTI RLRK Q+E+
Sbjct: 1 MGKRTKKVGITGKYGTRYGSTLRKLVKKIEISQHSTYHCAFCGKDNVKRTCVGIWECKTCRKVVAGGAYTLATPSAVTVRSTIGRLRKMQAES 93
BLAST of mRNA_M-pyrifera_M_contig7753.18249.1 vs. uniprot
Match: F0WDJ7_9STRA (60S ribosomal protein L37a putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WDJ7_9STRA) HSP 1 Score: 134 bits (337), Expect = 3.420e-35 Identity = 62/92 (67.39%), Postives = 75/92 (81.52%), Query Frame = 1
Query: 40 MGRRTKKVGITGKYGVRYGSSLRKVIKKIEITQHAKYTCSFCGKETTRRQVSGIWKCSACKTISAGGAYTLHTPAAVTVRSTIARLRKGQSE 315
MGRRTKKVGI GKYG RYGSSLRKV+KKIEI+QH+KY C FCGK++ +R V+GIW C +C AGGAY L+TP+A TVRST+AR+R+ E
Sbjct: 1 MGRRTKKVGICGKYGTRYGSSLRKVVKKIEISQHSKYNCPFCGKDSVKRTVTGIWNCKSCHKTMAGGAYLLNTPSAATVRSTLARIRRTHDE 92
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 171.0 |
Seed ortholog evalue | 2.7e-40 |
Seed eggNOG ortholog | 2880.D7FP42 |
Preferred name | RPL37A |
KEGG ko | ko:K02921,ko:K07374,ko:K14566,ko:K20241 |
KEGG Pathway | ko03008,ko03010,ko04145,ko04210,ko04530,ko04540,ko05130,map03008,map03010,map04145,map04210,map04530,map04540,map05130 |
KEGG Module | M00177,M00179 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000184,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015934,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048519,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060255,GO:0065007,GO:0070180,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904 |
EggNOG free text desc. | rRNA binding |
EggNOG OGs | COG1997@1,KOG0402@2759 |
Ec32 ortholog description | Zinc-binding ribosomal protein |
Ec32 ortholog | Ec-10_002400.1 |
COG Functional cat. | J |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | br01610,ko00000,ko00001,ko00002,ko03009,ko03011,ko03019,ko03036,ko04131,ko04147,ko04812 |
Exons | 4 |
Model size | 1198 |
Cds size | 288 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816676.1962667-UTR-M-pyrifera_M_contig7753:1119..1158 | 1622816676.1962667-UTR-M-pyrifera_M_contig7753:1119..1158 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig7753 1120..1158 + |
1692278113.1804414-UTR-M-pyrifera_M_contig7753:1119..1158 | 1692278113.1804414-UTR-M-pyrifera_M_contig7753:1119..1158 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig7753 1120..1158 + |
1622816676.2646854-UTR-M-pyrifera_M_contig7753:7474..8345 | 1622816676.2646854-UTR-M-pyrifera_M_contig7753:7474..8345 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig7753 7475..8345 + |
1692278113.237466-UTR-M-pyrifera_M_contig7753:7474..8345 | 1692278113.237466-UTR-M-pyrifera_M_contig7753:7474..8345 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig7753 7475..8345 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816676.2111804-CDS-M-pyrifera_M_contig7753:1158..1161 | 1622816676.2111804-CDS-M-pyrifera_M_contig7753:1158..1161 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7753 1159..1161 + |
1692278113.1980362-CDS-M-pyrifera_M_contig7753:1158..1161 | 1692278113.1980362-CDS-M-pyrifera_M_contig7753:1158..1161 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7753 1159..1161 + |
1622816676.227305-CDS-M-pyrifera_M_contig7753:3051..3138 | 1622816676.227305-CDS-M-pyrifera_M_contig7753:3051..3138 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7753 3052..3138 + |
1692278113.2087076-CDS-M-pyrifera_M_contig7753:3051..3138 | 1692278113.2087076-CDS-M-pyrifera_M_contig7753:3051..3138 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7753 3052..3138 + |
1622816676.2414005-CDS-M-pyrifera_M_contig7753:6139..6264 | 1622816676.2414005-CDS-M-pyrifera_M_contig7753:6139..6264 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7753 6140..6264 + |
1692278113.2185502-CDS-M-pyrifera_M_contig7753:6139..6264 | 1692278113.2185502-CDS-M-pyrifera_M_contig7753:6139..6264 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7753 6140..6264 + |
1622816676.2539976-CDS-M-pyrifera_M_contig7753:7401..7474 | 1622816676.2539976-CDS-M-pyrifera_M_contig7753:7401..7474 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7753 7402..7474 + |
1692278113.2280428-CDS-M-pyrifera_M_contig7753:7401..7474 | 1692278113.2280428-CDS-M-pyrifera_M_contig7753:7401..7474 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7753 7402..7474 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7753.18249.1 >prot_M-pyrifera_M_contig7753.18249.1 ID=prot_M-pyrifera_M_contig7753.18249.1|Name=mRNA_M-pyrifera_M_contig7753.18249.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=96bp
MGRRTKKVGITGKYGVRYGSSLRKVIKKIEITQHAKYTCSFCGKETTRRQ VSGIWKCSACKTISAGGAYTLHTPAAVTVRSTIARLRKGQSETGK* back to topmRNA from alignment at M-pyrifera_M_contig7753:1120..8345+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig7753.18249.1 ID=mRNA_M-pyrifera_M_contig7753.18249.1|Name=mRNA_M-pyrifera_M_contig7753.18249.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7226bp|location=Sequence derived from alignment at M-pyrifera_M_contig7753:1120..8345+ (Macrocystis pyrifera P11B4 male) TTCACGGCATCCTGACGGCCACGGCACCCCAGCAACACCATGGTGAGTGG
AAGCCTGATCTAGAGCGTTGCGTTGGATGCGTAGATGGTGTGAAGCATGC
GGGATTGCCGATGATCCCATCGCAAAGTAGCTCTCTGGTGTTTATTCATA
AGTTTGAGTCGAGCACGCTGCACCGCAAAGGCGACTTTTTTTCGAGAGTT
GGAGGGTGAGCGGACAAGAACGCACGGTGTTGATGGCGGCTTGCAAGTGC
TGGCTTCCTCTGGGTGAAGGTCAGAAGGCATTCAAAGGCTCTGCGGTGCC
AAAGGCTGAGGACTTGCTGCTTTGCTCGGGTTTGCTTGGAATCTGGAAAT
CAAACAAAGGAGGAGATGTGTCTCTGTTTCCGACTTTTCTTACCATAAGT
TTGTACACGTTTGTCTTGTGTGTGGTAATTTTAGCAGTCCCTGTAGGGTG
TCGTTGTCATCCAGACTCGTTGCCATAAGTTTGTACACGTTTGTCTTGTG
TGTGGTAATTTTAGCAGTCCCTGTAGGGTGTCGTTGTCATCCAGACTCGT
TGCCGAGCTGCATGGGCCGCACCGAGAGAAGCACGCAGTGCTGTCCTAAA
CGTCGCGAAGGAACACGTTTGTCTGAGCAGCTCCTAACCCAGCCGATGCT
TCAATCGTTTCTGCCGCTTAACATTGCGATGATTCTCGATGTCCCCTTTT
CGGATCCACTCTCATCACCCGAATCGTACTGCTGTGTTGTGTCCCTGGCG
TGGGGAGTTTGTCCAGCAAGTACGAGCGAGTACTTCCTTCCTTGTGTAGG
GTTGTGGCAGAGAATCGATGCCTCTCCAGTTAACTTAAAAAGCTGTACAG
AGTACCTGGCACACGAGAATTGCGAAACACCGTTGCTTCCACAGCGATTC
TCCCTGAGGCTTGCCGTAGTACAGCACGTACTAGGGCTTGTAGTGTAATA
AGTGCAGCTGTTTCTGCAAGTTGATACACCAACTCGTACATACTTTTTGA
TGTGTTTTCGTGGAGGCGATCGCTGCGGTCACCCCTGAAATCTGAAATTG
TACTCGCACCATGTTGATTATGTACATTTGGATGCATCTACTGCTGTACT
GGTGTACCCCGGTGGCTTGGTAAAAGGTGGTCCGCGTGCCTATCAAGATC
AATTTCATGCGTTCAAATCTCACCGAGTGCATGCTCGTAGGGACTTTTTC
TTGCATAAAAAATGATAACCGAAAGCGCGAGAGCGTGAGTTAGCTACATT
TGATGAAAATCGACGAGCAGTGGGAATGCTATGCGCGATAAAAATGAAGG
CACGTACCGGGGGGGGAGAAGGGACGACACCTGTGACCACGGCTTGTCCA
GAAGATCGTCGAGGGTAACACCTCCTACGAGTGGGCTGGAAAGTAAAAGT
GATGATGAAAAAGAAAAAAAAGAAAAAAAAATAATATACCGAAAGCACGG
GTAAAACCCACACCAAGCCAACGATAACAGCGACGGCGGAGGACGTCAAT
CAGCCACTATTCAATTATGCTACTGGTAGAGAAAACCGATAGTACTACTG
TAGATGAAAAGGCTTGCAGGGCGTGTTGCCGATTGGACTTCGACCTTGGG
TCTATCGCAATATTTGATGCGTTCTTGTCCACGAGGTATAGTATCGTCCA
AAAGGGGTGGTGGGTGCACTACACCGGTATAGAGCGGCTGTACGAGGTCC
AGATGCACCACGTGTCGTGGAGTAGTGAATGTAATACCCGTGTTTTTGAA
GGCTAAATGTATCGTGCGCACAGGGAGCGCTGCATCTACTGGACTAATGC
GGTAGCATGAACACCAGTAGCACAATTTTCTACTGCTCTGCTGTTGAGAA
GTACGTGCAGAACTCAATATTGAATTCGATTGGATGCCGCTTTCGTTTGC
ACCCTTGAAATGGCCGGCGGTGGTGACCACAGGGTAGGCGCACGAAGAAG
GTGGGGATCACCGGCAAGTACGGTGTGCGGTACGGTTCGTCCCTCCGCAA
GGTCATCAAGAAGATTGAGGTAAGACACGATATTTAATTCGTTGAGTAAA
CGGAACCTTTTTTATGGCGGTCATCCATCCACCGATCATGTCCAGACTTG
GCGGCTGGCTACTCGAGACTACGACGTTCTTTCCAATTTTGATAATTGCT
GTCGCTACTGGTACAGCAGTATCAATAATGGTCGCACTGCTGCCATAGGC
GCCAGCCAGCAATACCGACACTACCGCACGTAGCGGTAACCGGCACTGCT
CCGCGCATTACCATGCTGGTGAATCCCATCTGTGCCACGCGATTCGACAG
ACACTACTCACTACTCGTATTTCGGGCAACCGGCGTTATAGAGGGTTATG
TATGTATACTGGTATACAGCTTCACACGCTACGTACCGTAAACTGTAGCG
ACACCGTGCCGGACTGGGGGGTGCCGCTACTACTGTCAACCATGATGTCA
GCACTCTTGTTATCCAATCGATGAATGTTCAGCCTTATTGGAAGAGATTT
TTGAGCCACTCCTCTCCACCACTTTTTTTTTCCTTCTTGCCGTTCATTGA
TTCACCCTTGCGTTCTCTCCGTCCTACGATTAATATTAATAGTCGTAACT
TAGAGCCGGGGTCACATGACAGGCTCTGCCACCCCTCCCACAACGTACTT
AGTGGTATTTTTTTAAAACTTCGAGCTCGTTCCATTCAGCGACAGGCGTA
ACATTCCTTGTTCGCGCTTTTGCACCTTGGTTTGTGATAGTTGGATAACG
AAATTTGGCAAGGCTGTGCGTCATGAGGCTGACGCTGGGAACCGAAACCG
GAAAACAGAACCGGGTTTGTTGGGAGATCCAGGAAGAAATTCGTGCCAGA
TCCGATTTGTCGAATCTTATCGATGGACAAAAAACAGAAATCTATAAAAT
ATTTTCTGTATTCCGGATCAGAACTGGCCTGGCCAGACGAAACCAGACAC
CGGTTCTGTACGGTCCCAGAGCTGGCCGAACCTGCTTTTGAACCCCACAC
AGGAGGCATAACGTGGCGGGCCTAATGCTTGTACGAAGTACATATCATCG
GTACTACTGCTATACTCTCTCGGTATCTCTGACACGGTATATATACATAT
AGCGGTGGCTAGAGACTCCAAGCTCTGGTAATGGCGAACAACCGACTACA
CCGCGTGCTCTTGGGGGTTGTCGTTGTGTTCTTGAGTTTTCAGCAATGTC
AACGCACTGCTCCTTGATGCTGCAGCAGACTGCGAAGCTTGAGGACCCTT
CGTCGAAGGAAGTCAACCCAGTCCAGGAAGCTCGAGTCTGCGAAAGCAAG
CCCCATGTTACCCGGCGGGTACCAAACAGGATGCGTGGGTACCGTGTACT
ACTTTGTTTCCGCCGAATTCAAGTATTACGGTAACTCCTCCCTCCAACGT
CCTCCCACCTCAAATGAAACCCCGGCATATTTACACCAAACCCCATAAGG
TAGGGAAAGGCGAAATTCGATATACGAATCTGGGCGATACCAAAAACAGA
AGTGCATGCCAGGTCTGTTTTCCGGTTTCGGCTCCCATAAGATTCAGCCT
GATAATGCACACCGACTCATGGCTAGAACGCCTTTTGTTTTTTTTTCGTT
CTCAAGATGCATTTTTACCATTTTTTGTGGTTTTTTCATGAATTAGCCCT
TCTGAACGGAATAATTGCCAGATACCAGGTACCAGGTATGCTTTAAAAAA
AATGCAGTTGTGGATTGCTTTATATTGTTACAACCCCGACAAAAATTTGC
TTTCCAACTCTCAAAACCAAGGTGCAAAAGTGATTCACGTGAGAAGTAAT
TTTCCCCCTCTGGGATCCCAAGAGATCAATACGTTGTTTTGGTACTTGAG
CAGGCGTTTAATATACAAGTACTTTGCACGGCTCGCGCAATGAAGCAAGT
GTAACGGACGGCTTCCCCTTGTTGATACGATCATATTAACACGTTCAGTG
TCGAGTTATCACCGTATTGACCGACTTATGGCCTGTGTACAAATTATATC
GACATTTCTATAGGCAGTTTAAATTCATATGGAACAACGCCTCCCCAAGG
ATTACGAAAAAATCCCATATCTCGTGAATTACAGCTCGCACGCCAAAACA
ACCATCTCCAATGTCCGCGTTGTTGATGGGGTCACATTGATGAAGTTCGT
GTTTTTTTTTAGAAAATAAGCGCAGTCTTGGATATTTGATTTATGGCCCG
AAGGTGGAATGTTCTTATTGCTGGAACCAGCTCGTATTTCGTATTAGCTT
CAAAGATGTACGTGCAGCTTCTCTGTGTGGCTATCACTTGGCGAGTTCAG
TTCAGCGTCCGCGAGTACCCCCCCTCCCAACGGGCCTAATCGGGTCTAGA
GGGTGCTGCTCTAGTCATACCTGGTGCATGATATGGGATTTGCCGGCAGA
CTGCAACCTTGGACTCCGTCTGTTGTTGATGTATGAAACGTTGAGGAAAG
CCTACAAAACTTCCTTACAAAGATACCAGTACTTGCGTATACAAGGTGTA
TATAAGGTGTCCCAATTAGGTACCAGGTGTATTACAAATTTCTGCTCTAC
TACAAGCAGCGTCGCCTTGCGAACTTTGTAGAATCCGTGTCATCGCTAAA
GAGCAGTTTATCAGTCCGTCAGGCACCATTGACACATGCCCGTGTGGTTA
CCCTCTTGGAAAAAAATGAGAATTTGTGCGTAAAATGAAACACCTCAACA
CCTACGAGAGGTTTGGCAACTTCGCTACGAATTCAAATGCTTTGACCTCG
AAGTCTTACACCGGTATGTATTATCCTCGTAGTGTAAAGTACCTGGTATA
CATACGCAATGGTCGTTGTGCTGCCGTACTGTACCGGTATATATATTCGA
GCATGCCTCCAACGAATGCTGCACTCCTCGTCCGCCCTTTTAATATAGCA
TCTTTTTATTGTTTTCGTCGCGAACGGTCCGTGCATACCTCGAACATGGA
CTCAACTCCGTACGTCCTCGGTCGCCCCTCGCTATCTCGGAATATCGTGG
GTTTTGTCGCGGACCCGCAGATCACCCAGCACGCCAAGTACACGTGCTCC
TTCTGCGGCAAGGAAACCACCAGGCGCCAGGTGTCTGGAATCTGGAAGTG
CAGCGCCTGCAAGACGATCTCCGCGGGCGGTGCTTACACCCTCCAGTGAG
TGTTGAGTTTCGGCTTAAATATTTAGAAATTTTTATCCCTCGGGCAGATG
ATCGATTCATTCTTGGTGATGTAGATCTTTCAGGGCATACGTATTCTTAA
TGTGTACCCTGTATGCTCTATCGCTCATGTTGTCGGGTGGGAGCCGAAGC
CGTAGAGGTTGCGTGATTTTCTTGGACGTGTTTCCTTGGCTGGATCTGTA
CTACGTAGGTCCTGCACACCATTCCGTAGCGACAGGTTGGGATATTTTTA
ATTGTACAGTAGATCATGATCTATCCCGAGGTGTAAAAATTACCAGTGGT
TTGCGTCGTGTTCCTCACTGCGTGTGGGCACGGAGAGGGTGTACGATGTA
ACCGAACCGGTTGGACATCGAAGAAGGCCAGGTTCGTCGGGACACGTTCA
CCGGGTAGTTTTCCTCCAATTGTCGAATCCATTCCTGCGTCGCTGGCCTG
CAATTCGCCCCCACCTTGCTGTTTGTTTTGCTAATGAAAGGCATGGCAGT
CGCTGTGCGCCATCGTCGCCCCCTCCTTTGAACTACTGCATAGTATAACG
CTTCCTGCTTGTTGCTTTGTATGCCTCTTGGCCGGTCTCTTCGTGCTGTC
GCTAGAACTGCTTTGTTTTGATGAGGTGTGTTAGTCCAACAAGCAGGTCA
AGGTTGTTAGTTGGGATTTCTGCTGCTTGAATGTTCACAAACCGATTGCT
ATCTGCCGTTCTTGCTTGATTTTATTCGCTGCGCGTTGTTTTCTTGTTTG
GCTCGTTTTGGTTCGTTTTTGTACTGAGTACGTTGGCATTCCATTTGCTC
ACGTGGAGTACTTTGCGGTGATTTCGGTCATCCATATACCACGGTCTGTG
ACTACGTAATTCGTATTTCTGTAGGATGAAAAGATCGGGGCTGACACTAT
AGATGTAACGCGTGTCGTTGGGTAGAAATAACGGTTTAACGTGAAGGCAA
CACACGTTTACCGTTTATAGATCAGCATTCCCTTAACAGCACAGATTAAT
GTTTTTTTTTTGGTCATTTTACGCATTCCACGGGTTACTTAACTGGTGTA
TTCGTAATTGATCCCCATCCCTGTCCCGTCCCGTCTTTTTCCCACCTCGT
TCGTTCGTGTTGTTCGGCTGTTTTCCCTACAGCACCCCCGCCGCGGTGAC
CGTGCGGTCAACCATTGCGCGCCTGCGCAAGGGCCAGTCGGAGACCGGAA
AGTAGTGTTGCTGCCGTTAAATTGAGAGAGGGAGGGGGTCTGTCGATAGG
AGGTGCAGCCCTCGCTCGACCTTTGATTAATGCCGAAGTGAACCAATCTT
ATTCCCTCCATATCGAGGCTGACTTGTGCGCTTTTTTTGGCCGACCGGAG
GTGTTTAACCTCTCCCGTACGCTTGCTCGGCTTCCATCGCTTGGTTGGAG
CTCGAGTGGAGGAAGTTTGGTGTTGGCGGCTTGAGACGCGTGATTTCTCC
CTGGATATTGGGAAGGCTAAGCCTGTCGCCATCATGGATTCGTGTTTTCT
GTGAGCACATTGTTTTTGTGCTTACGAACAAAACCTACTGGCCCAGAATC
GTCAGCTCCCACTCTTGTTATGTGATCGTAGCTTGATTTTGCGACGTTAA
TTTTGTCGAAAGTCGCATCTGTTTTTGCTGATACCGAAAGGCCTGCCGTG
AACGAGACTATCACGGCCGGAGGTGCTTCTGCCTTTTCTAACTGATGGCT
CACACTGCGTTTCCAATCAACAGAAGCGCAGTACTCGTAGTCGTCCTGTG
TGTTGTGGCACATCTTCTCACTAAATGCGAATGATGTCATAGAACACTTA
GGACACCTTGGAAGTGCCTCGGCGCGATGAGAAGACCATCTGTATCTGAC
GCTTTTCACGCATGGCTATTGGTTTTTTTTTTGTCCCAACCCGCTTTGCT
GCACCACGGACCAACGCAAGTTTTCCCTCATGTTTCAAGTTGAAAAGCGG
GTGATGTTATAGAACACTTAGGACACCTTCGGAGTGCCTCGGCACAATGA
GAAGACCTTCTGTATCTGACGCTTTCACGCCTAGCGATTGTTTCCAGTTT
GCTTCCCATCCCGTTTTACTGCGACC back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig7753:1120..8345+ >mRNA_M-pyrifera_M_contig7753.18249.1 ID=mRNA_M-pyrifera_M_contig7753.18249.1|Name=mRNA_M-pyrifera_M_contig7753.18249.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=576bp|location=Sequence derived from alignment at M-pyrifera_M_contig7753:1120..8345+ (Macrocystis pyrifera P11B4 male) ATGATGGGTAGGCGCACGAAGAAGGTGGGGATCACCGGCAAGTACGGTGT GCGGTACGGTTCGTCCCTCCGCAAGGTCATCAAGAAGATTGAGGGTAGGC GCACGAAGAAGGTGGGGATCACCGGCAAGTACGGTGTGCGGTACGGTTCG TCCCTCCGCAAGGTCATCAAGAAGATTGAGATCACCCAGCACGCCAAGTA CACGTGCTCCTTCTGCGGCAAGGAAACCACCAGGCGCCAGGTGTCTGGAA TCTGGAAGTGCAGCGCCTGCAAGACGATCTCCGCGGGCGGTGCTTACACC CTCCAATCACCCAGCACGCCAAGTACACGTGCTCCTTCTGCGGCAAGGAA ACCACCAGGCGCCAGGTGTCTGGAATCTGGAAGTGCAGCGCCTGCAAGAC GATCTCCGCGGGCGGTGCTTACACCCTCCACACCCCCGCCGCGGTGACCG TGCGGTCAACCATTGCGCGCCTGCGCAAGGGCCAGTCGGAGACCGGAAAG TAGCACCCCCGCCGCGGTGACCGTGCGGTCAACCATTGCGCGCCTGCGCA AGGGCCAGTCGGAGACCGGAAAGTAG back to top
|