mRNA_M-pyrifera_M_contig77518.18242.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig77518.18242.1
Unique NamemRNA_M-pyrifera_M_contig77518.18242.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig77518.18242.1 vs. uniprot
Match: A0A2D4TCQ6_9GAMM (Short-chain dehydrogenase n=2 Tax=Haliea TaxID=475794 RepID=A0A2D4TCQ6_9GAMM)

HSP 1 Score: 420 bits (1080), Expect = 5.060e-147
Identity = 216/228 (94.74%), Postives = 219/228 (96.05%), Query Frame = 1
Query:    1 LGRLSQKLCIITGAGRGIGAAIARAFAEEGGRVVVTDKVRDLAASLASDIGGDHLRLDVASEADWAELAAVWPACDVLVNNAGITGFEESFRPHDPEHATLADWQAVHAVNLDGTFLGCRYGIGAMRASGAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGLRIRCNSIHPAAILTPMWEPMLGDGPDREDRMAAFVADTPMRRFGTPEEVAAIA 684
            +GRLSQKLCI+TGAGRGIG AIARAFAEEG RVVVTDKV DLAASLASDIGGDHLRLDVASE DWAELAAVWPACDVLVNNAGITGFEES RP DPEHA LADWQAVHAVNLDGTFLGCRYGI AMRA+GAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCA QGLRIRCNSIHPAAILTPMWEPMLGDGPDREDRMAAFVADTPMRRFGTPEEVAAIA
Sbjct:    1 MGRLSQKLCIVTGAGRGIGEAIARAFAEEGARVVVTDKVGDLAASLASDIGGDHLRLDVASEDDWAELAAVWPACDVLVNNAGITGFEESPRPQDPEHAALADWQAVHAVNLDGTFLGCRYGIRAMRANGAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAGQGLRIRCNSIHPAAILTPMWEPMLGDGPDREDRMAAFVADTPMRRFGTPEEVAAIA 228          
BLAST of mRNA_M-pyrifera_M_contig77518.18242.1 vs. uniprot
Match: UPI000C7F57F3 (SDR family oxidoreductase n=1 Tax=Kandeliimicrobium roseum TaxID=1737570 RepID=UPI000C7F57F3)

HSP 1 Score: 378 bits (970), Expect = 2.840e-130
Identity = 191/228 (83.77%), Postives = 202/228 (88.60%), Query Frame = 1
Query:    1 LGRLSQKLCIITGAGRGIGAAIARAFAEEGGRVVVTDKVRDLAASLASDIGGDHLRLDVASEADWAELAAVWPACDVLVNNAGITGFEESFRPHDPEHATLADWQAVHAVNLDGTFLGCRYGIGAMRASGAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGLRIRCNSIHPAAILTPMWEPMLGDGPDREDRMAAFVADTPMRRFGTPEEVAAIA 684
            + RL+ K CI+TG GRGIGAAIARAFA EG  VVVTDK    AA +A +IGG H RLDVASE DWA LA  WPACDVLVNNAGITGFEE+ RPHDPEHA+LADW+AVH VNLDGTFLGCRY IGAMRA G GSIINISSRSGLVG+PAAAAYASSKAAVRNHTKSVALYCAE+GL+IRCNSIHPAAILTPMWEPMLGDGPDRE RMAAFVADTPMRRFGT EEVAAIA
Sbjct:    1 MSRLNDKTCIVTGGGRGIGAAIARAFAREGATVVVTDKDEGSAADVAREIGGHHRRLDVASEPDWAALAEAWPACDVLVNNAGITGFEEAMRPHDPEHASLADWRAVHTVNLDGTFLGCRYAIGAMRAKGNGSIINISSRSGLVGVPAAAAYASSKAAVRNHTKSVALYCAEEGLKIRCNSIHPAAILTPMWEPMLGDGPDREARMAAFVADTPMRRFGTVEEVAAIA 228          
BLAST of mRNA_M-pyrifera_M_contig77518.18242.1 vs. uniprot
Match: B7RNY5_ROSS0 (3-beta-hydroxysteroid dehydrogenase n=1 Tax=Roseobacter sp. (strain GAI101) TaxID=391589 RepID=B7RNY5_ROSS0)

HSP 1 Score: 375 bits (964), Expect = 2.320e-129
Identity = 193/228 (84.65%), Postives = 203/228 (89.04%), Query Frame = 1
Query:    1 LGRLSQKLCIITGAGRGIGAAIARAFAEEGGRVVVTDKVRDLAASLASDIGGDHLRLDVASEADWAELAAVWPACDVLVNNAGITGFEESFRPHDPEHATLADWQAVHAVNLDGTFLGCRYGIGAMRASGAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGLRIRCNSIHPAAILTPMWEPMLGDGPDREDRMAAFVADTPMRRFGTPEEVAAIA 684
            +GRLS+K CI+TGAGRGIGAAIARAFA EG  VVVTD V   AAS+A +IG  H  LDVASEADWA LA  WPACDVLVNNAGITGFE++ RPHDPEHATLADW+AVH VNLDGTFLGCRY IGAMR  GAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGL IRCNSIHPAAILTPMWEPMLG+G DRE RMAAFVADTPMRRFGT EEVA+IA
Sbjct:    1 MGRLSKKTCIVTGAGRGIGAAIARAFAREGATVVVTDMVAKSAASIAEEIGAHHQCLDVASEADWAALAQRWPACDVLVNNAGITGFEDAMRPHDPEHATLADWRAVHRVNLDGTFLGCRYAIGAMRDKGAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGLNIRCNSIHPAAILTPMWEPMLGNGADREARMAAFVADTPMRRFGTVEEVASIA 228          
BLAST of mRNA_M-pyrifera_M_contig77518.18242.1 vs. uniprot
Match: A0A0N7LU33_THAGE (Cyclopentanol dehydrogenase n=1 Tax=Thalassobius gelatinovorus TaxID=53501 RepID=A0A0N7LU33_THAGE)

HSP 1 Score: 375 bits (963), Expect = 3.300e-129
Identity = 190/228 (83.33%), Postives = 202/228 (88.60%), Query Frame = 1
Query:    1 LGRLSQKLCIITGAGRGIGAAIARAFAEEGGRVVVTDKVRDLAASLASDIGGDHLRLDVASEADWAELAAVWPACDVLVNNAGITGFEESFRPHDPEHATLADWQAVHAVNLDGTFLGCRYGIGAMRASGAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGLRIRCNSIHPAAILTPMWEPMLGDGPDREDRMAAFVADTPMRRFGTPEEVAAIA 684
            + RL+ K+CI+TGAGRGIGAAI RAFA EG  VVVTDK    AA +A +IGG HLRLDVASEADW  LA  WPACDVLVNNAGITGFEE  R HDPEHA+LADW+AVHAVNLDGTFLGCRY IGAMR  G+GSIINISSRSG+VGIPAAAAYASSKAAVRNHTKSVALYCAEQGL IRCNSIHPAAILTPMWEPMLGDGPDRE RMAAFVADTPMRRFGT +EVA+IA
Sbjct:    1 MSRLNTKICIVTGAGRGIGAAIGRAFAREGATVVVTDKNETSAADVAREIGGHHLRLDVASEADWTALAEGWPACDVLVNNAGITGFEEGLRQHDPEHASLADWRAVHAVNLDGTFLGCRYAIGAMRTRGSGSIINISSRSGMVGIPAAAAYASSKAAVRNHTKSVALYCAEQGLNIRCNSIHPAAILTPMWEPMLGDGPDREARMAAFVADTPMRRFGTVDEVASIA 228          
BLAST of mRNA_M-pyrifera_M_contig77518.18242.1 vs. uniprot
Match: A0A2M8IVH9_9RHOB (Short-chain dehydrogenase n=2 Tax=Pseudooceanicola lipolyticus TaxID=2029104 RepID=A0A2M8IVH9_9RHOB)

HSP 1 Score: 373 bits (957), Expect = 3.110e-128
Identity = 188/228 (82.46%), Postives = 200/228 (87.72%), Query Frame = 1
Query:    1 LGRLSQKLCIITGAGRGIGAAIARAFAEEGGRVVVTDKVRDLAASLASDIGGDHLRLDVASEADWAELAAVWPACDVLVNNAGITGFEESFRPHDPEHATLADWQAVHAVNLDGTFLGCRYGIGAMRASGAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGLRIRCNSIHPAAILTPMWEPMLGDGPDREDRMAAFVADTPMRRFGTPEEVAAIA 684
            + RL+ KLCI+TGAGRGIGAAIARAF  EG  VVVTDK  D AA+LA +IG  H  LDVASEADWA LA +WPACDVLVNNAGITGFE   RPHDPEHATLADW+AVHAVNLDGTFLGCRY IGAMR  GAG+IINISSRSGLVGIPAAAAYA+SKAA+RNHTK+VALYCAEQGL IRCNSIHP AILTPMWEPMLGDGPDR  RMAA VADTP+RRFG PEEVAAIA
Sbjct:    1 MARLNGKLCIVTGAGRGIGAAIARAFCREGAAVVVTDKAADRAAALAGEIGAQHAGLDVASEADWAALARLWPACDVLVNNAGITGFEAGPRPHDPEHATLADWRAVHAVNLDGTFLGCRYAIGAMRVKGAGAIINISSRSGLVGIPAAAAYAASKAAIRNHTKTVALYCAEQGLNIRCNSIHPGAILTPMWEPMLGDGPDRPARMAALVADTPLRRFGQPEEVAAIA 228          
BLAST of mRNA_M-pyrifera_M_contig77518.18242.1 vs. uniprot
Match: A0A1I4ZH31_9RHOB (NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family n=1 Tax=Roseovarius lutimaris TaxID=1005928 RepID=A0A1I4ZH31_9RHOB)

HSP 1 Score: 368 bits (944), Expect = 2.570e-126
Identity = 187/226 (82.74%), Postives = 198/226 (87.61%), Query Frame = 1
Query:    7 RLSQKLCIITGAGRGIGAAIARAFAEEGGRVVVTDKVRDLAASLASDIGGDHLRLDVASEADWAELAAVWPACDVLVNNAGITGFEESFRPHDPEHATLADWQAVHAVNLDGTFLGCRYGIGAMRASGAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGLRIRCNSIHPAAILTPMWEPMLGDGPDREDRMAAFVADTPMRRFGTPEEVAAIA 684
            RL  K CI+TGA RGIGAAIARAFA+EG  VVVTDK  D AA++A ++GG  LRLDVA EADWA L   WPACDVLVNNAG+TGFEE+ RPHDPEHATL DW+AVHAVNLDGTFLGCRY I AMRA  AGSIINISSRSGLVGIPAAAAYA+SKAAVRNHTKSVALYCAEQGL IRCNSIHPAAILTPMWEPMLGDGPDR  RMAAFVADTP RRFG P+EVAAIA
Sbjct:    3 RLKDKTCIVTGAARGIGAAIARAFAQEGAGVVVTDKDADGAANVAREVGGQSLRLDVAVEADWATLTKTWPACDVLVNNAGVTGFEETMRPHDPEHATLEDWRAVHAVNLDGTFLGCRYAIQAMRAKRAGSIINISSRSGLVGIPAAAAYAASKAAVRNHTKSVALYCAEQGLNIRCNSIHPAAILTPMWEPMLGDGPDRAARMAAFVADTPQRRFGQPDEVAAIA 228          
BLAST of mRNA_M-pyrifera_M_contig77518.18242.1 vs. uniprot
Match: A0A4R3J944_9RHOB (NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) n=1 Tax=Primorskyibacter sedentarius TaxID=745311 RepID=A0A4R3J944_9RHOB)

HSP 1 Score: 367 bits (942), Expect = 5.180e-126
Identity = 184/226 (81.42%), Postives = 199/226 (88.05%), Query Frame = 1
Query:    7 RLSQKLCIITGAGRGIGAAIARAFAEEGGRVVVTDKVRDLAASLASDIGGDHLRLDVASEADWAELAAVWPACDVLVNNAGITGFEESFRPHDPEHATLADWQAVHAVNLDGTFLGCRYGIGAMRASGAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGLRIRCNSIHPAAILTPMWEPMLGDGPDREDRMAAFVADTPMRRFGTPEEVAAIA 684
            RL+ K CI+TG GRGIGAAIA AFA EG +VVVTDK  + A  +A +IGGDH RLDVASE DW  LAA WP CD LVNNAGITGFEE+ RPHDPE+A+L DW+AVHAVNLDGTFLGCRY IGAMR  GAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGL IRCNSIHPAAILTPMW+PMLGDGP+RE R+AAFVADTP+RRFG PEEVAA+A
Sbjct:    3 RLTGKTCIVTGGGRGIGAAIAAAFAREGAQVVVTDKDAESAERVAKEIGGDHQRLDVASEDDWRSLAAAWPQCDTLVNNAGITGFEEAMRPHDPENASLEDWRAVHAVNLDGTFLGCRYAIGAMRGKGAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGLNIRCNSIHPAAILTPMWDPMLGDGPEREARVAAFVADTPLRRFGAPEEVAALA 228          
BLAST of mRNA_M-pyrifera_M_contig77518.18242.1 vs. uniprot
Match: A0A1W1YWB9_9RHOB (NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family n=2 Tax=Primorskyibacter TaxID=1068904 RepID=A0A1W1YWB9_9RHOB)

HSP 1 Score: 362 bits (929), Expect = 5.100e-124
Identity = 181/228 (79.39%), Postives = 204/228 (89.47%), Query Frame = 1
Query:    1 LGRLSQKLCIITGAGRGIGAAIARAFAEEGGRVVVTDKVRDLAASLASDIGGDHLRLDVASEADWAELAAVWPACDVLVNNAGITGFEESFRPHDPEHATLADWQAVHAVNLDGTFLGCRYGIGAMRASGAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGLRIRCNSIHPAAILTPMWEPMLGDGPDREDRMAAFVADTPMRRFGTPEEVAAIA 684
            + RL+ K+CI+TG+GRGIGAAIARAFA EG +VVVTD+  + A ++AS++G D LRLDV+SEADW  L A +P CDVLVNNAG+TGFE++ RPHDPE+ATL DW+AVHAVNLDGTFLGCRY IGAMR  GAGSI+NISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGL IRCNSIHPAA+LTPMWEPMLGDGPDRE RMAAFVADTP+RRFG P EVAA+A
Sbjct:    1 MNRLTGKICIVTGSGRGIGAAIARAFANEGAKVVVTDRHAESAKAVASELGCDFLRLDVSSEADWDALKAGFPHCDVLVNNAGVTGFEDAMRPHDPENATLEDWRAVHAVNLDGTFLGCRYAIGAMRDKGAGSIVNISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGLNIRCNSIHPAAVLTPMWEPMLGDGPDREARMAAFVADTPLRRFGDPAEVAALA 228          
BLAST of mRNA_M-pyrifera_M_contig77518.18242.1 vs. uniprot
Match: A0A5P8YXQ0_9RHOB (3-beta-hydroxysteroid dehydrogenase n=1 Tax=Roseivivax sp. THAF197b TaxID=2588299 RepID=A0A5P8YXQ0_9RHOB)

HSP 1 Score: 358 bits (919), Expect = 1.640e-122
Identity = 182/226 (80.53%), Postives = 197/226 (87.17%), Query Frame = 1
Query:    7 RLSQKLCIITGAGRGIGAAIARAFAEEGGRVVVTDKVRDLAASLASDIGGDHLRLDVASEADWAELAAVWPACDVLVNNAGITGFEESFRPHDPEHATLADWQAVHAVNLDGTFLGCRYGIGAMRASGAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGLRIRCNSIHPAAILTPMWEPMLGDGPDREDRMAAFVADTPMRRFGTPEEVAAIA 684
            RLS+K CI+TGAGRGIGAAIARAFA EG  VVVTDK  + AA +A +IG +   LDVASE DWA LA  WP CDVLVNNAG+TGFEE+ RPHDPE+A+L DW+AVH VNLDGTFLGCRY I AMR  GAGSIINISSRSGLVGIPAAAAYASSKAA+RNHTKSVALYCAEQGL IRCNSIHPAAILTPMWEPMLG GPDR+  MAAFVADTP+RRFGTPEEVAA+A
Sbjct:    3 RLSKKTCIVTGAGRGIGAAIARAFAAEGATVVVTDKDAEAAADVAREIGAEARPLDVASEDDWAALAEAWPECDVLVNNAGVTGFEEAMRPHDPENASLEDWRAVHRVNLDGTFLGCRYAIRAMRPRGAGSIINISSRSGLVGIPAAAAYASSKAAMRNHTKSVALYCAEQGLNIRCNSIHPAAILTPMWEPMLGTGPDRDAHMAAFVADTPLRRFGTPEEVAALA 228          
BLAST of mRNA_M-pyrifera_M_contig77518.18242.1 vs. uniprot
Match: A3TUD3_PSEBH (Oxidoreductase n=1 Tax=Pseudooceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / KCTC 12145 / HTCC2597) TaxID=252305 RepID=A3TUD3_PSEBH)

HSP 1 Score: 358 bits (918), Expect = 2.320e-122
Identity = 181/226 (80.09%), Postives = 198/226 (87.61%), Query Frame = 1
Query:    7 RLSQKLCIITGAGRGIGAAIARAFAEEGGRVVVTDKVRDLAASLASDIGGDHLRLDVASEADWAELAAVWPACDVLVNNAGITGFEESFRPHDPEHATLADWQAVHAVNLDGTFLGCRYGIGAMRASGAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGLRIRCNSIHPAAILTPMWEPMLGDGPDREDRMAAFVADTPMRRFGTPEEVAAIA 684
            RL+ K+CI+TGA RGIGAAIARAFA EG  V+VTDK +  AA +A +IGG+ +RLDVASE DWA LA  WP CDVLVNNAG+TGFE + RPHDPE A+L DW+AVHAVNLDGTFL CRYGI AMR  GAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGL IRCNSIHPAA+LTPMWEPMLG GPDRE RMAAFVADTP+RRFG P+EVAA+A
Sbjct:    3 RLNTKICIVTGAARGIGAAIARAFAREGATVLVTDKDKGGAADIAREIGGEAMRLDVASEPDWAALAEAWPECDVLVNNAGVTGFEANSRPHDPETASLEDWRAVHAVNLDGTFLECRYGIRAMRPRGAGSIINISSRSGLVGIPAAAAYASSKAAVRNHTKSVALYCAEQGLNIRCNSIHPAAVLTPMWEPMLGTGPDREARMAAFVADTPLRRFGDPDEVAALA 228          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77518.18242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D4TCQ6_9GAMM5.060e-14794.74Short-chain dehydrogenase n=2 Tax=Haliea TaxID=475... [more]
UPI000C7F57F32.840e-13083.77SDR family oxidoreductase n=1 Tax=Kandeliimicrobiu... [more]
B7RNY5_ROSS02.320e-12984.653-beta-hydroxysteroid dehydrogenase n=1 Tax=Roseob... [more]
A0A0N7LU33_THAGE3.300e-12983.33Cyclopentanol dehydrogenase n=1 Tax=Thalassobius g... [more]
A0A2M8IVH9_9RHOB3.110e-12882.46Short-chain dehydrogenase n=2 Tax=Pseudooceanicola... [more]
A0A1I4ZH31_9RHOB2.570e-12682.74NAD(P)-dependent dehydrogenase, short-chain alcoho... [more]
A0A4R3J944_9RHOB5.180e-12681.42NAD(P)-dependent dehydrogenase (Short-subunit alco... [more]
A0A1W1YWB9_9RHOB5.100e-12479.39NAD(P)-dependent dehydrogenase, short-chain alcoho... [more]
A0A5P8YXQ0_9RHOB1.640e-12280.533-beta-hydroxysteroid dehydrogenase n=1 Tax=Roseiv... [more]
A3TUD3_PSEBH2.320e-12280.09Oxidoreductase n=1 Tax=Pseudooceanicola batsensis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77518contigM-pyrifera_M_contig77518:136..916 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score422.2
Seed ortholog evalue1.7e-115
Seed eggNOG ortholog1121937.AUHJ01000005_gene2381
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Enoyl-(Acyl carrier protein) reductase
EggNOG OGs1MUPX@1224,1RRW3@1236,465GH@72275,COG1028@1,COG1028@2
COG Functional cat.IQ
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
Exons1
Model size781
Cds size738
Stop1
Start0
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816675.745448-UTR-M-pyrifera_M_contig77518:135..1781622816675.745448-UTR-M-pyrifera_M_contig77518:135..178Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig77518 136..178 -
1692278112.886742-UTR-M-pyrifera_M_contig77518:135..1781692278112.886742-UTR-M-pyrifera_M_contig77518:135..178Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig77518 136..178 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816675.7589386-CDS-M-pyrifera_M_contig77518:178..9161622816675.7589386-CDS-M-pyrifera_M_contig77518:178..916Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77518 179..916 -
1692278112.8992195-CDS-M-pyrifera_M_contig77518:178..9161692278112.8992195-CDS-M-pyrifera_M_contig77518:178..916Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77518 179..916 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77518.18242.1prot_M-pyrifera_M_contig77518.18242.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig77518 179..916 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig77518.18242.1

>prot_M-pyrifera_M_contig77518.18242.1 ID=prot_M-pyrifera_M_contig77518.18242.1|Name=mRNA_M-pyrifera_M_contig77518.18242.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=246bp
LGRLSQKLCIITGAGRGIGAAIARAFAEEGGRVVVTDKVRDLAASLASDI
GGDHLRLDVASEADWAELAAVWPACDVLVNNAGITGFEESFRPHDPEHAT
LADWQAVHAVNLDGTFLGCRYGIGAMRASGAGSIINISSRSGLVGIPAAA
AYASSKAAVRNHTKSVALYCAEQGLRIRCNSIHPAAILTPMWEPMLGDGP
DREDRMAAFVADTPMRRFGTPEEVAAIADACLRRGGVHDRGRADD*
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mRNA from alignment at M-pyrifera_M_contig77518:136..916-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77518.18242.1 ID=mRNA_M-pyrifera_M_contig77518.18242.1|Name=mRNA_M-pyrifera_M_contig77518.18242.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=781bp|location=Sequence derived from alignment at M-pyrifera_M_contig77518:136..916- (Macrocystis pyrifera P11B4 male)
TTGGGGCGACTGAGTCAGAAACTGTGCATTATCACGGGTGCCGGGCGTGG CATTGGCGCGGCCATCGCGCGGGCTTTTGCCGAAGAAGGAGGCAGGGTCG TTGTGACCGACAAGGTCAGGGACCTGGCCGCATCGCTTGCCAGCGACATC GGCGGTGATCATCTGCGCCTTGACGTCGCATCCGAGGCCGATTGGGCTGA GCTTGCTGCGGTTTGGCCGGCCTGTGATGTGCTGGTCAATAACGCCGGTA TCACCGGTTTCGAGGAGTCCTTTCGTCCGCACGATCCCGAACACGCCACG CTGGCGGACTGGCAGGCGGTCCATGCAGTGAATCTCGATGGAACCTTTCT TGGCTGCCGCTATGGAATTGGCGCCATGCGCGCCAGTGGCGCCGGTTCGA TCATCAATATCTCGTCGCGGTCTGGTCTCGTCGGAATTCCCGCTGCAGCT GCCTACGCTTCGTCCAAAGCGGCGGTGCGAAACCATACCAAGTCCGTCGC GCTCTACTGTGCCGAACAGGGACTCAGAATCAGGTGCAACTCGATCCATC CTGCTGCGATCCTTACCCCGATGTGGGAGCCGATGCTGGGGGACGGGCCG GACCGCGAGGACCGGATGGCAGCCTTCGTTGCTGACACGCCTATGCGACG GTTCGGGACGCCCGAAGAAGTCGCGGCGATCGCTGATGCTTGCCTCCGAC GAGGCGGCGTACATGACCGGGGCAGAGCTGACGATTGACGGCGGACTTCT CGCGGGTTCGGCCGCTTCCCCTACTGTAGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig77518:136..916-

>mRNA_M-pyrifera_M_contig77518.18242.1 ID=mRNA_M-pyrifera_M_contig77518.18242.1|Name=mRNA_M-pyrifera_M_contig77518.18242.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1476bp|location=Sequence derived from alignment at M-pyrifera_M_contig77518:136..916- (Macrocystis pyrifera P11B4 male)
TTGGGGCGACTGAGTCAGAAACTGTGCATTATCACGGGTGCCGGGCGTGG
CATTGGCGCGGCCATCGCGCGGGCTTTTGCCGAAGAAGGAGGCAGGGTCG
TTGTGACCGACAAGGTCAGGGACCTGGCCGCATCGCTTGCCAGCGACATC
GGCGGTGATCATCTGCGCCTTGACGTCGCATCCGAGGCCGATTGGGCTGA
GCTTGCTGCGGTTTGGCCGGCCTGTGATGTGCTGGTCAATAACGCCGGTA
TCACCGGTTTCGAGGAGTCCTTTCGTCCGCACGATCCCGAACACGCCACG
CTGGCGGACTGGCAGGCGGTCCATGCAGTGAATCTCGATGGAACCTTTCT
TGGCTGCCGCTATGGAATTGGCGCCATGCGCGCCAGTGGCGCCGGTTCGA
TCATCAATATCTCGTCGCGGTCTGGTCTCGTCGGAATTCCCGCTGCAGCT
GCCTACGCTTCGTCCAAAGCGGCGGTGCGAAACCATACCAAGTCCGTCGC
GCTCTACTGTGCCGAACAGGGACTCAGAATCAGGTGCAACTCGATCCATC
CTGCTGCGATCCTTACCCCGATGTGGGAGCCGATGCTGGGGGACGGGCCG
GACCGCGAGGACCGGATGGCAGCCTTCGTTGCTGACACGCCTATGCGACG
GTTCGGGACGCCCGAAGAAGTCGCGGCGATCGCTGATGCTTGCCTCCGAC
GAGGCGGCGTACATGACCGGGGCAGAGCTGACGATTGATTGGGGCGACTG
AGTCAGAAACTGTGCATTATCACGGGTGCCGGGCGTGGCATTGGCGCGGC
CATCGCGCGGGCTTTTGCCGAAGAAGGAGGCAGGGTCGTTGTGACCGACA
AGGTCAGGGACCTGGCCGCATCGCTTGCCAGCGACATCGGCGGTGATCAT
CTGCGCCTTGACGTCGCATCCGAGGCCGATTGGGCTGAGCTTGCTGCGGT
TTGGCCGGCCTGTGATGTGCTGGTCAATAACGCCGGTATCACCGGTTTCG
AGGAGTCCTTTCGTCCGCACGATCCCGAACACGCCACGCTGGCGGACTGG
CAGGCGGTCCATGCAGTGAATCTCGATGGAACCTTTCTTGGCTGCCGCTA
TGGAATTGGCGCCATGCGCGCCAGTGGCGCCGGTTCGATCATCAATATCT
CGTCGCGGTCTGGTCTCGTCGGAATTCCCGCTGCAGCTGCCTACGCTTCG
TCCAAAGCGGCGGTGCGAAACCATACCAAGTCCGTCGCGCTCTACTGTGC
CGAACAGGGACTCAGAATCAGGTGCAACTCGATCCATCCTGCTGCGATCC
TTACCCCGATGTGGGAGCCGATGCTGGGGGACGGGCCGGACCGCGAGGAC
CGGATGGCAGCCTTCGTTGCTGACACGCCTATGCGACGGTTCGGGACGCC
CGAAGAAGTCGCGGCGATCGCTGATGCTTGCCTCCGACGAGGCGGCGTAC
ATGACCGGGGCAGAGCTGACGATTGA
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