mRNA_M-pyrifera_M_contig77466.18237.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig77466.18237.1
Unique NamemRNA_M-pyrifera_M_contig77466.18237.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig77466.18237.1 vs. uniprot
Match: A0A5A8DI08_CAFRO (EF-hand domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8DI08_CAFRO)

HSP 1 Score: 323 bits (829), Expect = 2.620e-109
Identity = 167/224 (74.55%), Postives = 190/224 (84.82%), Query Frame = 1
Query:   28 EPKDVTADESKQLRRVYDYLCDFAAKAKLEKTREPLLERKSKILAYKKNPEAVKIVDDHGVELSPEQVEMELDRIDRECAAITSRIEEIENKPDKKVSARDLQEALAKLGKKVSKKEVEDMIWEVDENLDGAVDWEEFQLMFARNVKDVTALEPYRLFNVVQFMMYDKDGGGEVSVDETMHMLYSRYGRDRLAEEMKALFGDRIAHTGDATLTFTEYLEAVERR 699
            EPKDVT DESKQL RV++YLCDFAAK KL K REP LERKSKILAYKKNPEAVKI+D+ G ELSPE+++ EL +ID ECA IT RIE+IE K +KK+  RDL EAL KLGKK +KKE+EDMIWEVDENLDG VDWEEFQLMF RN+KD T LEP++LFNVVQFMMYDKD GG+VSVDETMHMLYSRYGR+ L  EM+ LFGD ++ TGDA LTF +YL AVER+
Sbjct:   13 EPKDVTQDESKQLERVFNYLCDFAAKNKLFKEREPKLERKSKILAYKKNPEAVKIIDETGRELSPEEIDFELRKIDDECADITQRIEKIEAKEEKKIKPRDLLEALGKLGKKATKKEIEDMIWEVDENLDGCVDWEEFQLMFHRNIKDTTGLEPHQLFNVVQFMMYDKDCGGQVSVDETMHMLYSRYGREGLDSEMRNLFGDSLSATGDARLTFEQYLAAVERK 236          
BLAST of mRNA_M-pyrifera_M_contig77466.18237.1 vs. uniprot
Match: A0A813C532_9DINO (TNNC2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C532_9DINO)

HSP 1 Score: 282 bits (722), Expect = 6.260e-93
Identity = 149/232 (64.22%), Postives = 182/232 (78.45%), Query Frame = 1
Query:    4 AVAPRKGEEPKDVTADESKQLRRVYDYLCDFAAKAKLEKTREPLLERKSKILAYKKNPEAVKIVDDHGVELSPEQVEMELDRIDRECAAITSRIEEIENKPDKKVSARDLQEALAKLGKKVSKKEVEDMIWEVDENLDGAVDWEEFQLMFARNVKDVTALEPYRLFNVVQFMMYDKDGGGEVSVDETMHMLYSRYGRDRLAEEMKALFGDRIAHTGDATLTFTEYLEAVERR 699
            ++A  + E PKDVTA+E K+L RV+++LCDFA K KL    +P LERK KIL+YKKNPEAVK+ DD G ELS + ++ EL R++ E   I ++I  I++K DKKV  +DLQEALA LGK+ SKKE+EDMIWEVDENLDG VDWEEFQLMF RN+KD T  EP++LFNVVQFMMYD D  GEVSVDETMHMLY+RYG+ RL  EMKALFGD++ H G+ TLTF +YL+AV  R
Sbjct:   21 SMAAAEPEAPKDVTANELKELERVFEFLCDFAPKNKLNNLLKPKLERKQKILSYKKNPEAVKLEDDTGRELSDDLIDAELQRLEEEIGDIEAQINTIKSKQDKKVKPKDLQEALAFLGKRSSKKEIEDMIWEVDENLDGCVDWEEFQLMFQRNIKDTTGKEPFQLFNVVQFMMYDVDFSGEVSVDETMHMLYARYGKARLEREMKALFGDKL-HNGNGTLTFLDYLKAVSVR 251          
BLAST of mRNA_M-pyrifera_M_contig77466.18237.1 vs. uniprot
Match: A0A2R5GQD3_9STRA (Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQD3_9STRA)

HSP 1 Score: 211 bits (536), Expect = 4.380e-65
Identity = 104/222 (46.85%), Postives = 158/222 (71.17%), Query Frame = 1
Query:   34 KDVTADESKQLRRVYDYLCDFAAKAKLEKTREPLLERKSKILAYKKNPEAVKIVDDHGVELSPEQVEMELDRIDRECAAITSRIEEIENKPDKKVSARDLQEALAKLGKKVSKKEVEDMIWEVDENLDGAVDWEEFQLMFARNVKDVTALEPYRLFNVVQFMMYDKDGGGEVSVDETMHMLYSRYGRDRLAEEMKALFGDRIA-HTGDATLTFTEYLEAVER 696
            K ++ +E K+L RVY+ +C++  K+KL    +P   R+ +++A++K P+ + + +  G  +S E++E E + + +E AA+   +  +++ P +++   DL E L  LGK  SKKE+E+MIWEVDE+LDG VDWEEF+L + RN+ D T LEP +LFNV+QFM+YDKDG G+V+VDETMHMLY+RYGRDRL  +MK LFG+ ++   GD  L+F+EY  A++R
Sbjct:    9 KGISQNEEKELLRVYNTMCNYQPKSKLYARLQPQRARRDRLVAHRKAPDNIVVTNKEGEAMSSEEIEAEYETLRQEIAALEKEVAVLDSDPQRRIRPADLAECLKTLGKPNSKKEIEEMIWEVDESLDGVVDWEEFKLTYQRNLADTTGLEPCQLFNVIQFMIYDKDGSGKVTVDETMHMLYTRYGRDRLEGQMKLLFGEDLSTQDGDGELSFSEYCVAIQR 230          
BLAST of mRNA_M-pyrifera_M_contig77466.18237.1 vs. uniprot
Match: A0A7R9ZF54_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZF54_9STRA)

HSP 1 Score: 181 bits (460), Expect = 5.830e-55
Identity = 90/124 (72.58%), Postives = 101/124 (81.45%), Query Frame = 1
Query:  328 DLQEALAKLGKKVSKKEVEDMIWEVDENLDGAVDWEEFQLMFARNVKDVTALEPYRLFNVVQFMMYDKDGGGEVSVDETMHMLYSRYGRDRLAEEMKALFGDRIAHTGDATLTFTEYLEAVERR 699
            DL +AL  LGK+ +KKEVEDMIWEVDENLDG VDWEEF LMF RN+KD T LEP++LFNVVQFMMYD+   G VSVDETMHMLY+RYG+DRL  EMKALFGD +   GD  LTFT+YLEAV  R
Sbjct:    2 DLMDALKALGKRSTKKEVEDMIWEVDENLDGCVDWEEFHLMFQRNIKDKTGLEPFQLFNVVQFMMYDRTNSGAVSVDETMHMLYARYGKDRLEAEMKALFGDDLKADGDGCLTFTQYLEAVNVR 125          
BLAST of mRNA_M-pyrifera_M_contig77466.18237.1 vs. uniprot
Match: A0A7S2UTN0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTN0_9STRA)

HSP 1 Score: 182 bits (462), Expect = 2.650e-53
Identity = 107/251 (42.63%), Postives = 156/251 (62.15%), Query Frame = 1
Query:   31 PKDVTADESKQLRRVYDYLCDFAAKAKLEKTREPLLERKSKIL----------------AYKKNPEA-----VKIVDDHGVELSP------EQVEMELDRIDRECAAITSRIEEIENKPDKKVSARDLQEALAKLGKKVSKKEVEDMIWEVDENLDGAVDWEEFQLMFARNVKDVTALEPYRLFNVVQFMMYDKDGGGEVSVDETMHMLYSRYGRDRLAEEMKALFGDRIAHTGD--ATLTFTEYLEAVER 696
            P+++T  E ++L R Y++LC F  ++KLEK   P   R+ +++                  ++N  A     +  +D    +L+P       Q++ +++++  E   I S+IE + + PDKK+ A DL EAL  LGKKV+KKEV DMIWEVDENLDG VDWEE++LMF RN+ D T LEP +L+N+VQFM+YD D  G VSVD+TM+MLY+RYGR R+ ++++ LFG  +   G     + F  YL+AVER
Sbjct:    9 PQNITPQEERELVRTYNHLCHFLKRSKLEKEAAPKRARRQELIDKVQTSKKIHEIRQQQELEQNGSALAQQQIDELDSSYADLAPMGSVEMAQMQDDINQLTAEINGIESQIEALRSDPDKKIRAPDLMEALRFLGKKVTKKEVADMIWEVDENLDGCVDWEEYRLMFQRNIFDRTGLEPSKLYNMVQFMIYDHDNKGLVSVDQTMNMLYARYGRSRMEQKLRELFGTDMRENGKQGGEIDFLTYLQAVER 259          
BLAST of mRNA_M-pyrifera_M_contig77466.18237.1 vs. uniprot
Match: A0A2D4BK57_PYTIN (Outer dynein arm-docking complex subunit 3 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK57_PYTIN)

HSP 1 Score: 174 bits (441), Expect = 9.900e-51
Identity = 96/225 (42.67%), Postives = 140/225 (62.22%), Query Frame = 1
Query:   25 EEPKDVTADESKQLRRVYDYLCDFAAKAKLEKTREPLLERKSKILAYKKNPEAVKIVDDHGVELSPEQVEMELDRIDRECAAITSRIEEIENKPDKKVSARDLQEALAKLGKKVSKKEVEDMIWEVDENLDGAVDWEEFQLMFARNVKDVTALEPYRLFNVVQFMMYDKDGGGEVSVDETMHMLYSRYGRDRLAEEMKALFGDRIAHTGDATLTFTEYLEAVERR 699
            +E K + A E ++LRRV+D+L  +  K KL  T     ER++++ A K NP+   +V+D GV+++ E++E EL +ID     +++ +  +++ P + +   DL +A+  LGK  SKKE+ DMIWE DENLD  VDW E + M  RN+ D T LEP  LFNVVQFM YDK   G ++ D+TM +L++RYG+ +L   MK LFGD         L+F  YLE V R+
Sbjct:   14 DENKGMIAQEERELRRVFDHLASYRQKRKLNATIAAAKERRARLEAGKANPDVSALVNDKGVKMTREEIEEELRKIDYNLEKLSNELAVVQSNPARHIKNEDLYDAIKALGKVCSKKEISDMIWEADENLDSVVDWXELRAMXNRNLMDKTELEPVNLFNVVQFMTYDKKNCGTITADDTMAILFARYGQSQLEMRMKQLFGD------SDELSFVNYLERVGRQ 232          
BLAST of mRNA_M-pyrifera_M_contig77466.18237.1 vs. uniprot
Match: A0A5D6XT50_9STRA (EF-hand domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XT50_9STRA)

HSP 1 Score: 171 bits (434), Expect = 8.870e-50
Identity = 92/225 (40.89%), Postives = 139/225 (61.78%), Query Frame = 1
Query:   25 EEPKDVTADESKQLRRVYDYLCDFAAKAKLEKTREPLLERKSKILAYKKNPEAVKIVDDHGVELSPEQVEMELDRIDRECAAITSRIEEIENKPDKKVSARDLQEALAKLGKKVSKKEVEDMIWEVDENLDGAVDWEEFQLMFARNVKDVTALEPYRLFNVVQFMMYDKDGGGEVSVDETMHMLYSRYGRDRLAEEMKALFGDRIAHTGDATLTFTEYLEAVERR 699
            ++ + + A E ++LRRV+D+L  +  K KL        +RK ++ A + NPE   +++D G++++ E++E EL RI++     T  +  +++   K +   DL EA+  LGK  SKKE+ DM+WE DENLDG VDW+E + MF RN+ D T LEP  LFNVVQFM YDK   G ++ D+TM +L++RYG+ +L   MK LFG+         L+F  YLE V ++
Sbjct:    6 DDARGMIAQEERELRRVFDHLASYRQKKKLAAAVSAGKDRKQRLEASRANPEVAPVLNDKGLKMAREEIEDELRRIEQSAEKATGELSALQSSASKFIRTEDLYEAIKALGKVCSKKEISDMVWEADENLDGVVDWDELRAMFNRNLLDKTELEPVNLFNVVQFMTYDKKNCGTITADDTMAILFARYGQSQLEMRMKQLFGE------SDELSFVHYLERVGKQ 224          
BLAST of mRNA_M-pyrifera_M_contig77466.18237.1 vs. uniprot
Match: A0A8K1CT54_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT54_PYTOL)

HSP 1 Score: 168 bits (426), Expect = 1.420e-48
Identity = 91/225 (40.44%), Postives = 141/225 (62.67%), Query Frame = 1
Query:   25 EEPKDVTADESKQLRRVYDYLCDFAAKAKLEKTREPLLERKSKILAYKKNPEAVKIVDDHGVELSPEQVEMELDRIDRECAAITSRIEEIENKPDKKVSARDLQEALAKLGKKVSKKEVEDMIWEVDENLDGAVDWEEFQLMFARNVKDVTALEPYRLFNVVQFMMYDKDGGGEVSVDETMHMLYSRYGRDRLAEEMKALFGDRIAHTGDATLTFTEYLEAVERR 699
            +E K + A E ++LRRV+D+L  +  K ++  +     ER++++ A + NP+   +V++ G++++ E+++ EL ++D       + +  I++  +K +   DL +A+  LGK  SKKEV DMIWE DENLDG VDW+E + MF RN+ D T LEP  LFNVVQFM YDK   G ++ D+TM +L++RYG+ +L   MK LFGD         L+F  YLE V ++
Sbjct:    6 DETKGMIAQEERELRRVFDHLASYRQKKRINASIATSKERRARLEASRANPDVSGLVNEKGIKMTREEIDEELRKVDFNLEKHMTELSAIQSSTNKHIKNEDLYDAIKALGKVCSKKEVSDMIWEADENLDGVVDWDELRSMFNRNLMDKTELEPVNLFNVVQFMTYDKKNCGTITADDTMAILFARYGQSQLEMRMKQLFGD------SDELSFVNYLERVGKQ 224          
BLAST of mRNA_M-pyrifera_M_contig77466.18237.1 vs. uniprot
Match: K3WSY1_GLOUD (EF-hand domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSY1_GLOUD)

HSP 1 Score: 166 bits (421), Expect = 8.020e-48
Identity = 92/225 (40.89%), Postives = 137/225 (60.89%), Query Frame = 1
Query:   25 EEPKDVTADESKQLRRVYDYLCDFAAKAKLEKTREPLLERKSKILAYKKNPEAVKIVDDHGVELSPEQVEMELDRIDRECAAITSRIEEIENKPDKKVSARDLQEALAKLGKKVSKKEVEDMIWEVDENLDGAVDWEEFQLMFARNVKDVTALEPYRLFNVVQFMMYDKDGGGEVSVDETMHMLYSRYGRDRLAEEMKALFGDRIAHTGDATLTFTEYLEAVERR 699
            +E K + A E ++LRRV+D++  +  K K+        ERK ++ A K NP+   ++++ G+++  E+++ E+ +I+       + +  I++   K +   DL EA+  LGK  SKKE+ DMIWE DENLDG VDW+E + MF RN+ D T LEP  LFNVVQFM YDK   G ++ D+TM +L++RYG+ +L   MK LFGD         LTF  YLE V ++
Sbjct:    6 DEAKPMIAQEERELRRVFDHVASYRQKKKILTAMAASRERKQRLEASKANPDLSPMLNEKGIKMGDEELDDEIKKIEHGLDKAAAELSAIQSSVTKFIKNEDLYEAIKTLGKVCSKKEIADMIWEADENLDGVVDWDELRAMFNRNLLDKTELEPVNLFNVVQFMTYDKKNCGTITADDTMAILFARYGQSQLEMRMKQLFGD------SDELTFVNYLERVGKQ 224          
BLAST of mRNA_M-pyrifera_M_contig77466.18237.1 vs. uniprot
Match: A0A8J2X371_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X371_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.860e-47
Identity = 97/227 (42.73%), Postives = 134/227 (59.03%), Query Frame = 1
Query:   22 GEEPKDVTADESKQLRRVYDYLCDFAAKAKLEKTREPLLERKSKILAYKKNPEAVKIVDDHGVELSPEQVEMELDRIDRECAAITSRIEEIENKPDKKVSARDLQEALAKLGKKVSKKEVEDMIWEVDENLDGAVDWEEFQLMFARNVKDVTALEPYRLFNVVQFMMYDKDGGGEVSVDETMHMLYSRYGRDRLAEEMKALFGDRIAHTGDA--TLTFTEYLEAVER 696
            G E  ++T  E  QLRRV+  LCD+ AK K+ K   P  ++  K+             DD   ++    V  E+  ++ +   +   ++EIE K D  VS  DL EAL  LG+K  KK+ E MIWEVDE+LDG V W+E +LMF RN++D T LEP +LFNVV F+++D D  G VSVDETM +LY+RYGR ++ + +K LFGD +   G     + F  YL AVE+
Sbjct:    6 GNEAAEITPQEENQLRRVHRLLCDYGAKKKVLKLLRPKQDQLEKLRQS---------ADDEQADIL---VASEIQSLETDVEKLRQDLQEIEKKSDGLVSCVDLLEALKTLGRKAQKKDAEAMIWEVDEDLDGCVSWDEMRLMFQRNIRDTTGLEPSQLFNVVMFLIFDLDEDGMVSVDETMELLYARYGRHKMEDRLKMLFGDDMKEEGKGGGEIDFVTYLRAVEK 220          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77466.18237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DI08_CAFRO2.620e-10974.55EF-hand domain-containing protein n=2 Tax=Sar TaxI... [more]
A0A813C532_9DINO6.260e-9364.22TNNC2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A2R5GQD3_9STRA4.380e-6546.85Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=23... [more]
A0A7R9ZF54_9STRA5.830e-5572.58Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2UTN0_9STRA2.650e-5342.63Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2D4BK57_PYTIN9.900e-5142.67Outer dynein arm-docking complex subunit 3 n=1 Tax... [more]
A0A5D6XT50_9STRA8.870e-5040.89EF-hand domain-containing protein n=1 Tax=Pythium ... [more]
A0A8K1CT54_PYTOL1.420e-4840.44Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
K3WSY1_GLOUD8.020e-4840.89EF-hand domain-containing protein n=1 Tax=Globispo... [more]
A0A8J2X371_9STRA2.860e-4742.73Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77466contigM-pyrifera_M_contig77466:148..846 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score175.6
Seed ortholog evalue2.6e-41
Seed eggNOG ortholog36331.EPrPI00000019535
Preferred nameEXOSC3
KEGG rclassRC00046,RC00150,RC00180
KEGG koko:K00505,ko:K03681,ko:K10645,ko:K11087,ko:K14684
KEGG TC2.A.29.23
KEGG ReactionR00731,R02078,R02363,R02383,R04693,R04884
KEGG Pathwayko00350,ko00950,ko00965,ko01100,ko01110,ko03018,ko03040,ko04916,ko05322,map00350,map00950,map00965,map01100,map01110,map03018,map03040,map04916,map05322
KEGG ModuleM00042,M00351,M00352,M00354,M00355,M00391,M00398
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000175,GO:0000176,GO:0000177,GO:0000178,GO:0000184,GO:0000243,GO:0000245,GO:0000288,GO:0000291,GO:0000375,GO:0000377,GO:0000387,GO:0000395,GO:0000398,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000785,GO:0000956,GO:0001775,GO:0002164,GO:0002200,GO:0002204,GO:0002208,GO:0002250,GO:0002252,GO:0002263,GO:0002285,GO:0002312,GO:0002366,GO:0002376,GO:0002377,GO:0002381,GO:0002440,GO:0002443,GO:0002449,GO:0002460,GO:0002520,GO:0002562,GO:0002637,GO:0002639,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002703,GO:0002705,GO:0002706,GO:0002708,GO:0002712,GO:0002714,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0002889,GO:0002891,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005682,GO:0005684,GO:0005685,GO:0005686,GO:0005687,GO:0005689,GO:0005694,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0006139,GO:0006259,GO:0006304,GO:0006310,GO:0006364,GO:0006376,GO:0006396,GO:0006397,GO:0006399,GO:0006401,GO:0006402,GO:0006403,GO:0006725,GO:0006807,GO:0006810,GO:0006913,GO:0006955,GO:0007275,GO:0008150,GO:0008152,GO:0008298,GO:0008380,GO:0008408,GO:0009056,GO:0009057,GO:0009791,GO:0009892,GO:0009893,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010608,GO:0010629,GO:0016020,GO:0016043,GO:0016064,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016075,GO:0016078,GO:0016180,GO:0016441,GO:0016444,GO:0016445,GO:0016447,GO:0016458,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019219,GO:0019222,GO:0019439,GO:0019724,GO:0022607,GO:0022613,GO:0022618,GO:0030097,GO:0030145,GO:0030532,GO:0031047,GO:0031090,GO:0031123,GO:0031125,GO:0031126,GO:0031323,GO:0031325,GO:0031329,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0034427,GO:0034470,GO:0034472,GO:0034475,GO:0034622,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0034708,GO:0034709,GO:0034715,GO:0034719,GO:0035166,GO:0035167,GO:0035194,GO:0035327,GO:0035770,GO:0036464,GO:0040029,GO:0042113,GO:0042254,GO:0043021,GO:0043144,GO:0043167,GO:0043169,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043484,GO:0043487,GO:0043488,GO:0043628,GO:0043632,GO:0043633,GO:0043634,GO:0043928,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044437,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045006,GO:0045190,GO:0045191,GO:0045292,GO:0045321,GO:0045495,GO:0045830,GO:0045911,GO:0045935,GO:0046483,GO:0046540,GO:0046649,GO:0046700,GO:0046872,GO:0046907,GO:0046914,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048534,GO:0048542,GO:0048569,GO:0048583,GO:0048584,GO:0048731,GO:0048732,GO:0048856,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050864,GO:0050865,GO:0050867,GO:0050871,GO:0050896,GO:0051052,GO:0051054,GO:0051094,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051249,GO:0051251,GO:0051252,GO:0051641,GO:0051649,GO:0060255,GO:0060293,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070478,GO:0070481,GO:0070651,GO:0070727,GO:0070990,GO:0071004,GO:0071007,GO:0071010,GO:0071011,GO:0071013,GO:0071014,GO:0071025,GO:0071027,GO:0071028,GO:0071029,GO:0071031,GO:0071033,GO:0071034,GO:0071035,GO:0071038,GO:0071042,GO:0071043,GO:0071046,GO:0071047,GO:0071049,GO:0071051,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097525,GO:0097526,GO:0098588,GO:0098805,GO:0120114,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1903311,GO:1905354,GO:1990234,GO:1990446,GO:1990904,GO:2000026
EggNOG free text desc.Exosome complex exonuclease RRP40. Source PGD
EggNOG OGs1MAGK@121069,COG1097@1,COG1958@1,KOG1004@2759,KOG3428@2759
EC1.14.18.1,2.3.2.27
COG Functional cat.J
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03019,ko03032,ko03041,ko04121
Exons1
Model size699
Cds size699
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816675.5022237-CDS-M-pyrifera_M_contig77466:147..8461622816675.5022237-CDS-M-pyrifera_M_contig77466:147..846Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77466 148..846 -
1692278112.7764263-CDS-M-pyrifera_M_contig77466:147..8461692278112.7764263-CDS-M-pyrifera_M_contig77466:147..846Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77466 148..846 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77466.18237.1prot_M-pyrifera_M_contig77466.18237.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig77466 148..846 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig77466.18237.1

>prot_M-pyrifera_M_contig77466.18237.1 ID=prot_M-pyrifera_M_contig77466.18237.1|Name=mRNA_M-pyrifera_M_contig77466.18237.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=233bp
MAVAPRKGEEPKDVTADESKQLRRVYDYLCDFAAKAKLEKTREPLLERKS
KILAYKKNPEAVKIVDDHGVELSPEQVEMELDRIDRECAAITSRIEEIEN
KPDKKVSARDLQEALAKLGKKVSKKEVEDMIWEVDENLDGAVDWEEFQLM
FARNVKDVTALEPYRLFNVVQFMMYDKDGGGEVSVDETMHMLYSRYGRDR
LAEEMKALFGDRIAHTGDATLTFTEYLEAVERR
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mRNA from alignment at M-pyrifera_M_contig77466:148..846-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77466.18237.1 ID=mRNA_M-pyrifera_M_contig77466.18237.1|Name=mRNA_M-pyrifera_M_contig77466.18237.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=699bp|location=Sequence derived from alignment at M-pyrifera_M_contig77466:148..846- (Macrocystis pyrifera P11B4 male)
ATGGCAGTAGCGCCACGAAAAGGGGAGGAACCCAAGGACGTGACGGCTGA TGAAAGCAAACAGTTGCGTCGAGTGTATGACTACCTTTGTGATTTCGCGG CGAAAGCGAAGCTGGAGAAAACAAGAGAGCCTCTGTTGGAGCGGAAGAGC AAGATTCTTGCGTACAAGAAGAACCCAGAGGCTGTGAAGATTGTGGACGA CCATGGGGTAGAGCTTAGTCCAGAACAAGTGGAGATGGAGCTTGATCGGA TCGATCGAGAGTGTGCAGCAATCACCAGCCGCATTGAAGAAATTGAAAAC AAACCTGACAAGAAAGTGAGTGCAAGAGACTTGCAAGAAGCACTGGCCAA GTTGGGAAAGAAGGTGAGCAAGAAGGAGGTGGAGGATATGATCTGGGAAG TGGATGAGAACCTTGATGGAGCGGTGGATTGGGAAGAATTTCAGCTCATG TTTGCTCGAAACGTCAAAGATGTCACTGCTCTTGAACCGTATCGTCTCTT CAACGTCGTACAGTTCATGATGTACGACAAGGATGGTGGTGGAGAGGTGA GCGTTGATGAAACCATGCACATGCTGTATTCAAGGTATGGCAGGGACAGG CTTGCAGAAGAGATGAAAGCGCTCTTTGGAGATAGGATTGCACACACAGG AGATGCTACTCTCACCTTTACAGAGTACCTGGAAGCAGTCGAACGCAGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig77466:148..846-

>mRNA_M-pyrifera_M_contig77466.18237.1 ID=mRNA_M-pyrifera_M_contig77466.18237.1|Name=mRNA_M-pyrifera_M_contig77466.18237.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1398bp|location=Sequence derived from alignment at M-pyrifera_M_contig77466:148..846- (Macrocystis pyrifera P11B4 male)
ATGGCAGTAGCGCCACGAAAAGGGGAGGAACCCAAGGACGTGACGGCTGA
TGAAAGCAAACAGTTGCGTCGAGTGTATGACTACCTTTGTGATTTCGCGG
CGAAAGCGAAGCTGGAGAAAACAAGAGAGCCTCTGTTGGAGCGGAAGAGC
AAGATTCTTGCGTACAAGAAGAACCCAGAGGCTGTGAAGATTGTGGACGA
CCATGGGGTAGAGCTTAGTCCAGAACAAGTGGAGATGGAGCTTGATCGGA
TCGATCGAGAGTGTGCAGCAATCACCAGCCGCATTGAAGAAATTGAAAAC
AAACCTGACAAGAAAGTGAGTGCAAGAGACTTGCAAGAAGCACTGGCCAA
GTTGGGAAAGAAGGTGAGCAAGAAGGAGGTGGAGGATATGATCTGGGAAG
TGGATGAGAACCTTGATGGAGCGGTGGATTGGGAAGAATTTCAGCTCATG
TTTGCTCGAAACGTCAAAGATGTCACTGCTCTTGAACCGTATCGTCTCTT
CAACGTCGTACAGTTCATGATGTACGACAAGGATGGTGGTGGAGAGGTGA
GCGTTGATGAAACCATGCACATGCTGTATTCAAGGTATGGCAGGGACAGG
CTTGCAGAAGAGATGAAAGCGCTCTTTGGAGATAGGATTGCACACACAGG
AGATGCTACTCTCACCTTTACAGAGTACCTGGAAGCAGTCGAACGCAGAA
TGGCAGTAGCGCCACGAAAAGGGGAGGAACCCAAGGACGTGACGGCTGAT
GAAAGCAAACAGTTGCGTCGAGTGTATGACTACCTTTGTGATTTCGCGGC
GAAAGCGAAGCTGGAGAAAACAAGAGAGCCTCTGTTGGAGCGGAAGAGCA
AGATTCTTGCGTACAAGAAGAACCCAGAGGCTGTGAAGATTGTGGACGAC
CATGGGGTAGAGCTTAGTCCAGAACAAGTGGAGATGGAGCTTGATCGGAT
CGATCGAGAGTGTGCAGCAATCACCAGCCGCATTGAAGAAATTGAAAACA
AACCTGACAAGAAAGTGAGTGCAAGAGACTTGCAAGAAGCACTGGCCAAG
TTGGGAAAGAAGGTGAGCAAGAAGGAGGTGGAGGATATGATCTGGGAAGT
GGATGAGAACCTTGATGGAGCGGTGGATTGGGAAGAATTTCAGCTCATGT
TTGCTCGAAACGTCAAAGATGTCACTGCTCTTGAACCGTATCGTCTCTTC
AACGTCGTACAGTTCATGATGTACGACAAGGATGGTGGTGGAGAGGTGAG
CGTTGATGAAACCATGCACATGCTGTATTCAAGGTATGGCAGGGACAGGC
TTGCAGAAGAGATGAAAGCGCTCTTTGGAGATAGGATTGCACACACAGGA
GATGCTACTCTCACCTTTACAGAGTACCTGGAAGCAGTCGAACGCAGA
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